Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059228.t1 | XP_013455085.1 | 99.5 | 203 | 1 | 0 | 19 | 221 | 19 | 221 | 2.40E-115 | 424.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059228.t1 | O22152 | 71.1 | 211 | 51 | 6 | 20 | 221 | 20 | 229 | 3.1e-76 | 286.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059228.t1 | A0A072UJ49 | 99.5 | 203 | 1 | 0 | 19 | 221 | 19 | 221 | 1.7e-115 | 424.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene059228.t1 | TF | C2C2-YABBY |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049758 | MS.gene059228 | 0.825249 | 5.20E-54 | -1.69E-46 |
| MS.gene050128 | MS.gene059228 | 0.834885 | 2.31E-56 | -1.69E-46 |
| MS.gene050301 | MS.gene059228 | 0.812441 | 4.23E-51 | -1.69E-46 |
| MS.gene05101 | MS.gene059228 | 0.813082 | 3.06E-51 | -1.69E-46 |
| MS.gene051471 | MS.gene059228 | 0.817177 | 3.78E-52 | -1.69E-46 |
| MS.gene051789 | MS.gene059228 | 0.822876 | 1.87E-53 | -1.69E-46 |
| MS.gene052078 | MS.gene059228 | 0.81919 | 1.32E-52 | -1.69E-46 |
| MS.gene052178 | MS.gene059228 | 0.846674 | 1.87E-59 | -1.69E-46 |
| MS.gene052326 | MS.gene059228 | 0.803177 | 3.95E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene059228 | 0.803198 | 3.91E-49 | -1.69E-46 |
| MS.gene054376 | MS.gene059228 | 0.807067 | 6.06E-50 | -1.69E-46 |
| MS.gene054618 | MS.gene059228 | 0.809331 | 1.99E-50 | -1.69E-46 |
| MS.gene055254 | MS.gene059228 | 0.814418 | 1.56E-51 | -1.69E-46 |
| MS.gene055277 | MS.gene059228 | 0.828091 | 1.09E-54 | -1.69E-46 |
| MS.gene055422 | MS.gene059228 | 0.833247 | 5.95E-56 | -1.69E-46 |
| MS.gene055428 | MS.gene059228 | 0.804813 | 1.80E-49 | -1.69E-46 |
| MS.gene055712 | MS.gene059228 | 0.809331 | 2.00E-50 | -1.69E-46 |
| MS.gene056612 | MS.gene059228 | 0.804188 | 2.44E-49 | -1.69E-46 |
| MS.gene057439 | MS.gene059228 | 0.846747 | 1.79E-59 | -1.69E-46 |
| MS.gene059228 | MS.gene059518 | 0.816036 | 6.80E-52 | -1.69E-46 |
| MS.gene059228 | MS.gene059894 | 0.817204 | 3.72E-52 | -1.69E-46 |
| MS.gene059228 | MS.gene059974 | 0.80566 | 1.20E-49 | -1.69E-46 |
| MS.gene059228 | MS.gene060005 | 0.852284 | 5.11E-61 | -1.69E-46 |
| MS.gene059228 | MS.gene06037 | 0.848261 | 6.86E-60 | -1.69E-46 |
| MS.gene059228 | MS.gene061049 | 0.822998 | 1.75E-53 | -1.69E-46 |
| MS.gene059228 | MS.gene061112 | 0.845658 | 3.54E-59 | -1.69E-46 |
| MS.gene059228 | MS.gene061113 | 0.803906 | 2.79E-49 | -1.69E-46 |
| MS.gene059228 | MS.gene061265 | 0.842621 | 2.31E-58 | -1.69E-46 |
| MS.gene059228 | MS.gene061284 | 0.827018 | 1.97E-54 | -1.69E-46 |
| MS.gene059228 | MS.gene061476 | 0.810126 | 1.35E-50 | -1.69E-46 |
| MS.gene059228 | MS.gene061679 | 0.82042 | 6.92E-53 | -1.69E-46 |
| MS.gene059228 | MS.gene061788 | 0.856519 | 3.04E-62 | -1.69E-46 |
| MS.gene059228 | MS.gene062252 | 0.820872 | 5.45E-53 | -1.69E-46 |
| MS.gene059228 | MS.gene062882 | 0.838208 | 3.30E-57 | -1.69E-46 |
| MS.gene059228 | MS.gene062883 | 0.830499 | 2.84E-55 | -1.69E-46 |
| MS.gene059228 | MS.gene063103 | 0.876115 | 1.80E-68 | -1.69E-46 |
| MS.gene059228 | MS.gene064679 | 0.809443 | 1.89E-50 | -1.69E-46 |
| MS.gene059228 | MS.gene065133 | 0.804227 | 2.39E-49 | -1.69E-46 |
| MS.gene059228 | MS.gene065137 | 0.860552 | 1.91E-63 | -1.69E-46 |
| MS.gene059228 | MS.gene065138 | 0.860538 | 1.93E-63 | -1.69E-46 |
| MS.gene059228 | MS.gene065378 | 0.820721 | 5.90E-53 | -1.69E-46 |
| MS.gene059228 | MS.gene066019 | 0.852341 | 4.92E-61 | -1.69E-46 |
| MS.gene059228 | MS.gene067755 | 0.860881 | 1.52E-63 | -1.69E-46 |
| MS.gene059228 | MS.gene068590 | 0.838992 | 2.07E-57 | -1.69E-46 |
| MS.gene059228 | MS.gene068614 | 0.849924 | 2.37E-60 | -1.69E-46 |
| MS.gene059228 | MS.gene069124 | 0.837741 | 4.35E-57 | -1.69E-46 |
| MS.gene059228 | MS.gene069147 | 0.844876 | 5.76E-59 | -1.69E-46 |
| MS.gene059228 | MS.gene069679 | 0.807589 | 4.69E-50 | -1.69E-46 |
| MS.gene059228 | MS.gene07036 | 0.806048 | 9.94E-50 | -1.69E-46 |
| MS.gene059228 | MS.gene070594 | 0.820545 | 6.48E-53 | -1.69E-46 |
| MS.gene059228 | MS.gene070595 | 0.827133 | 1.85E-54 | -1.69E-46 |
| MS.gene059228 | MS.gene070624 | 0.800048 | 1.73E-48 | -1.69E-46 |
| MS.gene059228 | MS.gene070876 | 0.864299 | 1.34E-64 | -1.69E-46 |
| MS.gene059228 | MS.gene072196 | 0.801202 | 1.01E-48 | -1.69E-46 |
| MS.gene059228 | MS.gene072568 | 0.80582 | 1.11E-49 | -1.69E-46 |
| MS.gene059228 | MS.gene072571 | 0.805715 | 1.17E-49 | -1.69E-46 |
| MS.gene059228 | MS.gene072897 | 0.807133 | 5.86E-50 | -1.69E-46 |
| MS.gene059228 | MS.gene073925 | 0.815461 | 9.14E-52 | -1.69E-46 |
| MS.gene059228 | MS.gene073926 | 0.835213 | 1.91E-56 | -1.69E-46 |
| MS.gene059228 | MS.gene073962 | 0.803001 | 4.29E-49 | -1.69E-46 |
| MS.gene059228 | MS.gene07407 | 0.857577 | 1.48E-62 | -1.69E-46 |
| MS.gene059228 | MS.gene07431 | 0.812767 | 3.59E-51 | -1.69E-46 |
| MS.gene059228 | MS.gene08691 | 0.833284 | 5.82E-56 | -1.69E-46 |
| MS.gene059228 | MS.gene08753 | 0.818804 | 1.62E-52 | -1.69E-46 |
| MS.gene059228 | MS.gene20612 | 0.842266 | 2.87E-58 | -1.69E-46 |
| MS.gene059228 | MS.gene20988 | 0.806857 | 6.71E-50 | -1.69E-46 |
| MS.gene059228 | MS.gene21053 | 0.815974 | 7.02E-52 | -1.69E-46 |
| MS.gene059228 | MS.gene21136 | 0.810836 | 9.45E-51 | -1.69E-46 |
| MS.gene059228 | MS.gene23012 | 0.827836 | 1.26E-54 | -1.69E-46 |
| MS.gene059228 | MS.gene23372 | 0.821575 | 3.75E-53 | -1.69E-46 |
| MS.gene059228 | MS.gene23378 | 0.808507 | 2.99E-50 | -1.69E-46 |
| MS.gene059228 | MS.gene23887 | 0.845726 | 3.39E-59 | -1.69E-46 |
| MS.gene059228 | MS.gene23923 | 0.848321 | 6.60E-60 | -1.69E-46 |
| MS.gene059228 | MS.gene24039 | 0.825028 | 5.86E-54 | -1.69E-46 |
| MS.gene059228 | MS.gene24546 | 0.808217 | 3.45E-50 | -1.69E-46 |
| MS.gene059228 | MS.gene24730 | 0.803478 | 3.42E-49 | -1.69E-46 |
| MS.gene059228 | MS.gene24776 | 0.808153 | 3.56E-50 | -1.69E-46 |
| MS.gene059228 | MS.gene25661 | 0.813952 | 1.97E-51 | -1.69E-46 |
| MS.gene059228 | MS.gene25664 | 0.801626 | 8.24E-49 | -1.69E-46 |
| MS.gene059228 | MS.gene26990 | 0.849061 | 4.12E-60 | -1.69E-46 |
| MS.gene059228 | MS.gene27217 | 0.853863 | 1.80E-61 | -1.69E-46 |
| MS.gene059228 | MS.gene27725 | 0.854896 | 9.07E-62 | -1.69E-46 |
| MS.gene059228 | MS.gene28067 | 0.850675 | 1.46E-60 | -1.69E-46 |
| MS.gene059228 | MS.gene28797 | 0.80054 | 1.37E-48 | -1.69E-46 |
| MS.gene059228 | MS.gene28998 | 0.830916 | 2.24E-55 | -1.69E-46 |
| MS.gene059228 | MS.gene29146 | 0.84358 | 1.28E-58 | -1.69E-46 |
| MS.gene059228 | MS.gene29785 | 0.811875 | 5.62E-51 | -1.69E-46 |
| MS.gene059228 | MS.gene29820 | 0.802039 | 6.78E-49 | -1.69E-46 |
| MS.gene059228 | MS.gene29822 | 0.846282 | 2.40E-59 | -1.69E-46 |
| MS.gene059228 | MS.gene31117 | 0.829644 | 4.59E-55 | -1.69E-46 |
| MS.gene059228 | MS.gene32736 | 0.839254 | 1.77E-57 | -1.69E-46 |
| MS.gene059228 | MS.gene33873 | 0.819844 | 9.38E-53 | -1.69E-46 |
| MS.gene059228 | MS.gene34231 | 0.818021 | 2.44E-52 | -1.69E-46 |
| MS.gene059228 | MS.gene34464 | 0.821176 | 4.64E-53 | -1.69E-46 |
| MS.gene059228 | MS.gene35391 | 0.80005 | 1.73E-48 | -1.69E-46 |
| MS.gene059228 | MS.gene35480 | 0.830489 | 2.85E-55 | -1.69E-46 |
| MS.gene059228 | MS.gene35514 | 0.800073 | 1.71E-48 | -1.69E-46 |
| MS.gene059228 | MS.gene35592 | 0.846731 | 1.81E-59 | -1.69E-46 |
| MS.gene059228 | MS.gene36048 | 0.811715 | 6.10E-51 | -1.69E-46 |
| MS.gene059228 | MS.gene36648 | 0.827226 | 1.76E-54 | -1.69E-46 |
| MS.gene059228 | MS.gene38740 | 0.807836 | 4.16E-50 | -1.69E-46 |
| MS.gene059228 | MS.gene39341 | 0.833709 | 4.56E-56 | -1.69E-46 |
| MS.gene059228 | MS.gene39658 | 0.825408 | 4.77E-54 | -1.69E-46 |
| MS.gene059228 | MS.gene40233 | 0.827593 | 1.44E-54 | -1.69E-46 |
| MS.gene059228 | MS.gene40511 | 0.805368 | 1.38E-49 | -1.69E-46 |
| MS.gene059228 | MS.gene40751 | 0.814647 | 1.38E-51 | -1.69E-46 |
| MS.gene059228 | MS.gene41950 | 0.851829 | 6.88E-61 | -1.69E-46 |
| MS.gene059228 | MS.gene42327 | 0.81065 | 1.04E-50 | -1.69E-46 |
| MS.gene059228 | MS.gene42660 | 0.832215 | 1.07E-55 | -1.69E-46 |
| MS.gene059228 | MS.gene43899 | 0.88659 | 2.99E-72 | -1.69E-46 |
| MS.gene059228 | MS.gene43954 | 0.807242 | 5.56E-50 | -1.69E-46 |
| MS.gene059228 | MS.gene44274 | 0.832527 | 8.99E-56 | -1.69E-46 |
| MS.gene059228 | MS.gene45085 | 0.859776 | 3.27E-63 | -1.69E-46 |
| MS.gene059228 | MS.gene45439 | 0.817921 | 2.57E-52 | -1.69E-46 |
| MS.gene059228 | MS.gene45532 | 0.826853 | 2.16E-54 | -1.69E-46 |
| MS.gene059228 | MS.gene45858 | 0.925155 | 2.69E-90 | -1.69E-46 |
| MS.gene059228 | MS.gene46176 | 0.811127 | 8.18E-51 | -1.69E-46 |
| MS.gene059228 | MS.gene46177 | 0.817586 | 3.05E-52 | -1.69E-46 |
| MS.gene059228 | MS.gene46272 | -0.800629 | 1.32E-48 | -1.69E-46 |
| MS.gene059228 | MS.gene46352 | 0.802157 | 6.41E-49 | -1.69E-46 |
| MS.gene059228 | MS.gene48257 | 0.980703 | 7.79E-151 | -1.69E-46 |
| MS.gene059228 | MS.gene48438 | 0.852975 | 3.24E-61 | -1.69E-46 |
| MS.gene059228 | MS.gene48796 | 0.870731 | 1.17E-66 | -1.69E-46 |
| MS.gene059228 | MS.gene48914 | 0.980487 | 2.48E-150 | -1.69E-46 |
| MS.gene059228 | MS.gene51304 | 0.85956 | 3.80E-63 | -1.69E-46 |
| MS.gene059228 | MS.gene51556 | 0.814838 | 1.26E-51 | -1.69E-46 |
| MS.gene059228 | MS.gene52238 | 0.854292 | 1.36E-61 | -1.69E-46 |
| MS.gene059228 | MS.gene52988 | 0.813436 | 2.56E-51 | -1.69E-46 |
| MS.gene059228 | MS.gene53556 | 0.845157 | 4.84E-59 | -1.69E-46 |
| MS.gene059228 | MS.gene54055 | 0.804778 | 1.83E-49 | -1.69E-46 |
| MS.gene059228 | MS.gene54407 | 0.8284 | 9.18E-55 | -1.69E-46 |
| MS.gene059228 | MS.gene54408 | 0.834184 | 3.47E-56 | -1.69E-46 |
| MS.gene059228 | MS.gene54700 | 0.869459 | 3.05E-66 | -1.69E-46 |
| MS.gene059228 | MS.gene55695 | 0.866964 | 1.94E-65 | -1.69E-46 |
| MS.gene059228 | MS.gene55769 | 0.833826 | 4.27E-56 | -1.69E-46 |
| MS.gene059228 | MS.gene57121 | 0.839519 | 1.51E-57 | -1.69E-46 |
| MS.gene059228 | MS.gene57299 | 0.852272 | 5.15E-61 | -1.69E-46 |
| MS.gene059228 | MS.gene57406 | 0.81923 | 1.30E-52 | -1.69E-46 |
| MS.gene059228 | MS.gene58270 | 0.816833 | 4.51E-52 | -1.69E-46 |
| MS.gene059228 | MS.gene58537 | 0.816323 | 5.87E-52 | -1.69E-46 |
| MS.gene059228 | MS.gene59730 | 0.819089 | 1.39E-52 | -1.69E-46 |
| MS.gene059228 | MS.gene60267 | 0.832028 | 1.19E-55 | -1.69E-46 |
| MS.gene059228 | MS.gene60321 | 0.829513 | 4.93E-55 | -1.69E-46 |
| MS.gene059228 | MS.gene61507 | 0.803256 | 3.80E-49 | -1.69E-46 |
| MS.gene059228 | MS.gene61582 | 0.830714 | 2.51E-55 | -1.69E-46 |
| MS.gene059228 | MS.gene61586 | 0.830182 | 3.39E-55 | -1.69E-46 |
| MS.gene059228 | MS.gene62005 | 0.803405 | 3.54E-49 | -1.69E-46 |
| MS.gene059228 | MS.gene62419 | 0.817011 | 4.11E-52 | -1.69E-46 |
| MS.gene059228 | MS.gene62645 | 0.841517 | 4.53E-58 | -1.69E-46 |
| MS.gene059228 | MS.gene62720 | 0.822275 | 2.58E-53 | -1.69E-46 |
| MS.gene059228 | MS.gene63009 | 0.827904 | 1.21E-54 | -1.69E-46 |
| MS.gene059228 | MS.gene64424 | 0.85495 | 8.75E-62 | -1.69E-46 |
| MS.gene059228 | MS.gene64426 | 0.853768 | 1.92E-61 | -1.69E-46 |
| MS.gene059228 | MS.gene64621 | 0.801746 | 7.79E-49 | -1.69E-46 |
| MS.gene059228 | MS.gene65665 | 0.81148 | 6.86E-51 | -1.69E-46 |
| MS.gene059228 | MS.gene65851 | 0.822342 | 2.49E-53 | -1.69E-46 |
| MS.gene059228 | MS.gene66497 | 0.80734 | 5.30E-50 | -1.69E-46 |
| MS.gene059228 | MS.gene66498 | 0.802638 | 5.10E-49 | -1.69E-46 |
| MS.gene059228 | MS.gene66736 | 0.870833 | 1.08E-66 | -1.69E-46 |
| MS.gene059228 | MS.gene66884 | 0.824341 | 8.51E-54 | -1.69E-46 |
| MS.gene059228 | MS.gene68151 | 0.876207 | 1.68E-68 | -1.69E-46 |
| MS.gene059228 | MS.gene68242 | 0.81575 | 7.88E-52 | -1.69E-46 |
| MS.gene059228 | MS.gene68338 | 0.881191 | 2.95E-70 | -1.69E-46 |
| MS.gene059228 | MS.gene68393 | 0.835141 | 1.99E-56 | -1.69E-46 |
| MS.gene059228 | MS.gene68723 | 0.810115 | 1.35E-50 | -1.69E-46 |
| MS.gene059228 | MS.gene68751 | 0.878831 | 2.04E-69 | -1.69E-46 |
| MS.gene059228 | MS.gene68963 | 0.803839 | 2.88E-49 | -1.69E-46 |
| MS.gene059228 | MS.gene69027 | 0.809137 | 2.20E-50 | -1.69E-46 |
| MS.gene059228 | MS.gene69083 | 0.848578 | 5.61E-60 | -1.69E-46 |
| MS.gene059228 | MS.gene69686 | 0.801932 | 7.13E-49 | -1.69E-46 |
| MS.gene059228 | MS.gene69718 | 0.819663 | 1.03E-52 | -1.69E-46 |
| MS.gene059228 | MS.gene69798 | 0.829324 | 5.49E-55 | -1.69E-46 |
| MS.gene059228 | MS.gene70093 | 0.821233 | 4.50E-53 | -1.69E-46 |
| MS.gene059228 | MS.gene70095 | 0.821939 | 3.09E-53 | -1.69E-46 |
| MS.gene059228 | MS.gene71024 | 0.831436 | 1.67E-55 | -1.69E-46 |
| MS.gene059228 | MS.gene71439 | 0.848593 | 5.55E-60 | -1.69E-46 |
| MS.gene059228 | MS.gene71604 | 0.871954 | 4.61E-67 | -1.69E-46 |
| MS.gene059228 | MS.gene71833 | 0.800244 | 1.58E-48 | -1.69E-46 |
| MS.gene059228 | MS.gene74443 | 0.805314 | 1.42E-49 | -1.69E-46 |
| MS.gene059228 | MS.gene74922 | 0.800371 | 1.49E-48 | -1.69E-46 |
| MS.gene059228 | MS.gene75021 | 0.855253 | 7.14E-62 | -1.69E-46 |
| MS.gene059228 | MS.gene75996 | 0.816887 | 4.39E-52 | -1.69E-46 |
| MS.gene059228 | MS.gene76302 | 0.803771 | 2.97E-49 | -1.69E-46 |
| MS.gene059228 | MS.gene76306 | 0.836988 | 6.78E-57 | -1.69E-46 |
| MS.gene059228 | MS.gene76620 | 0.80171 | 7.92E-49 | -1.69E-46 |
| MS.gene059228 | MS.gene76747 | 0.834364 | 3.13E-56 | -1.69E-46 |
| MS.gene059228 | MS.gene77022 | 0.842141 | 3.10E-58 | -1.69E-46 |
| MS.gene059228 | MS.gene78876 | 0.804365 | 2.24E-49 | -1.69E-46 |
| MS.gene059228 | MS.gene78925 | 0.82233 | 2.51E-53 | -1.69E-46 |
| MS.gene059228 | MS.gene79438 | 0.81609 | 6.61E-52 | -1.69E-46 |
| MS.gene059228 | MS.gene79806 | 0.843154 | 1.67E-58 | -1.69E-46 |
| MS.gene059228 | MS.gene80354 | 0.803236 | 3.84E-49 | -1.69E-46 |
| MS.gene059228 | MS.gene80996 | 0.828537 | 8.51E-55 | -1.69E-46 |
| MS.gene059228 | MS.gene80997 | 0.83439 | 3.08E-56 | -1.69E-46 |
| MS.gene059228 | MS.gene81086 | 0.80913 | 2.20E-50 | -1.69E-46 |
| MS.gene059228 | MS.gene81421 | 0.807594 | 4.68E-50 | -1.69E-46 |
| MS.gene059228 | MS.gene81680 | 0.828427 | 9.04E-55 | -1.69E-46 |
| MS.gene059228 | MS.gene81793 | 0.820679 | 6.04E-53 | -1.69E-46 |
| MS.gene059228 | MS.gene82256 | 0.86849 | 6.28E-66 | -1.69E-46 |
| MS.gene059228 | MS.gene82427 | 0.812004 | 5.27E-51 | -1.69E-46 |
| MS.gene059228 | MS.gene85316 | 0.81485 | 1.25E-51 | -1.69E-46 |
| MS.gene059228 | MS.gene85579 | 0.820308 | 7.35E-53 | -1.69E-46 |
| MS.gene059228 | MS.gene86114 | 0.844394 | 7.77E-59 | -1.69E-46 |
| MS.gene059228 | MS.gene86236 | 0.842333 | 2.76E-58 | -1.69E-46 |
| MS.gene059228 | MS.gene86932 | 0.835347 | 1.77E-56 | -1.69E-46 |
| MS.gene059228 | MS.gene88217 | 0.83216 | 1.11E-55 | -1.69E-46 |
| MS.gene059228 | MS.gene90275 | 0.824996 | 5.96E-54 | -1.69E-46 |
| MS.gene059228 | MS.gene90444 | 0.802442 | 5.60E-49 | -1.69E-46 |
| MS.gene059228 | MS.gene90704 | 0.805472 | 1.31E-49 | -1.69E-46 |
| MS.gene059228 | MS.gene91319 | 0.831345 | 1.76E-55 | -1.69E-46 |
| MS.gene059228 | MS.gene91325 | 0.818255 | 2.16E-52 | -1.69E-46 |
| MS.gene059228 | MS.gene91761 | 0.844067 | 9.51E-59 | -1.69E-46 |
| MS.gene059228 | MS.gene92718 | 0.806731 | 7.13E-50 | -1.69E-46 |
| MS.gene059228 | MS.gene94501 | 0.825356 | 4.90E-54 | -1.69E-46 |
| MS.gene059228 | MS.gene95539 | 0.862883 | 3.70E-64 | -1.69E-46 |
| MS.gene059228 | MS.gene95864 | 0.830749 | 2.46E-55 | -1.69E-46 |
| MS.gene059228 | MS.gene96206 | 0.831555 | 1.56E-55 | -1.69E-46 |
| MS.gene059228 | MS.gene96705 | 0.856733 | 2.64E-62 | -1.69E-46 |
| MS.gene059228 | MS.gene96838 | 0.808348 | 3.24E-50 | -1.69E-46 |
| MS.gene059228 | MS.gene97818 | 0.825345 | 4.93E-54 | -1.69E-46 |
| MS.gene059228 | MS.gene97858 | 0.814345 | 1.62E-51 | -1.69E-46 |
| MS.gene059228 | MS.gene98287 | 0.838122 | 3.47E-57 | -1.69E-46 |
| MS.gene059228 | MS.gene98318 | 0.839003 | 2.05E-57 | -1.69E-46 |
| MS.gene059228 | MS.gene99139 | 0.800764 | 1.24E-48 | -1.69E-46 |
| MS.gene059228 | MS.gene99165 | 0.837624 | 4.66E-57 | -1.69E-46 |
| MS.gene059228 | MS.gene99622 | 0.827082 | 1.90E-54 | -1.69E-46 |
| MS.gene059228 | MS.gene99735 | 0.819242 | 1.29E-52 | -1.69E-46 |
| MS.gene059228 | MS.gene99806 | 0.813515 | 2.46E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene08601 | MS.gene059228 | PPI |
| MS.gene01487 | MS.gene059228 | PPI |
| MS.gene42837 | MS.gene059228 | PPI |
| MS.gene002513 | MS.gene059228 | PPI |
| MS.gene39530 | MS.gene059228 | PPI |
| MS.gene062560 | MS.gene059228 | PPI |
| MS.gene47580 | MS.gene059228 | PPI |
| MS.gene028744 | MS.gene059228 | PPI |
| MS.gene043573 | MS.gene059228 | PPI |
| MS.gene004184 | MS.gene059228 | PPI |
| MS.gene26397 | MS.gene059228 | PPI |
| MS.gene047370 | MS.gene059228 | PPI |
| MS.gene007633 | MS.gene059228 | PPI |
| MS.gene31320 | MS.gene059228 | PPI |
| MS.gene08711 | MS.gene059228 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059228.t1 | MTR_4g025900 | 99.548 | 221 | 1 | 0 | 1 | 221 | 1 | 221 | 1.23e-168 | 463 |
| MS.gene059228.t1 | MTR_4g101660 | 71.770 | 209 | 51 | 6 | 18 | 221 | 13 | 218 | 1.92e-93 | 273 |
| MS.gene059228.t1 | MTR_4g114730 | 53.368 | 193 | 64 | 4 | 20 | 206 | 11 | 183 | 4.61e-60 | 187 |
| MS.gene059228.t1 | MTR_2g087740 | 52.041 | 196 | 83 | 5 | 19 | 211 | 8 | 195 | 5.10e-57 | 179 |
| MS.gene059228.t1 | MTR_4g050300 | 55.215 | 163 | 62 | 3 | 22 | 184 | 8 | 159 | 5.34e-51 | 163 |
| MS.gene059228.t1 | MTR_5g034030 | 50.000 | 158 | 71 | 2 | 23 | 179 | 12 | 162 | 6.29e-46 | 152 |
| MS.gene059228.t1 | MTR_5g046230 | 47.500 | 160 | 64 | 5 | 21 | 178 | 14 | 155 | 8.92e-38 | 131 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059228.t1 | AT2G45190 | 67.431 | 218 | 49 | 6 | 19 | 221 | 19 | 229 | 1.39e-96 | 281 |
| MS.gene059228.t1 | AT4G00180 | 62.661 | 233 | 59 | 10 | 8 | 219 | 13 | 238 | 9.26e-81 | 241 |
| MS.gene059228.t1 | AT4G00180 | 61.722 | 209 | 57 | 9 | 32 | 219 | 1 | 207 | 4.26e-68 | 208 |
| MS.gene059228.t1 | AT2G45190 | 63.372 | 172 | 41 | 6 | 65 | 221 | 1 | 165 | 7.02e-66 | 201 |
| MS.gene059228.t1 | AT2G26580 | 57.485 | 167 | 49 | 5 | 22 | 186 | 8 | 154 | 1.68e-56 | 177 |
| MS.gene059228.t1 | AT2G26580 | 57.485 | 167 | 49 | 5 | 22 | 186 | 8 | 154 | 1.68e-56 | 177 |
| MS.gene059228.t1 | AT1G08465 | 56.322 | 174 | 52 | 5 | 22 | 188 | 7 | 163 | 1.37e-55 | 175 |
| MS.gene059228.t1 | AT1G23420 | 46.584 | 161 | 84 | 2 | 24 | 182 | 20 | 180 | 7.90e-40 | 137 |
| MS.gene059228.t1 | AT1G23420 | 46.584 | 161 | 84 | 2 | 24 | 182 | 51 | 211 | 4.31e-39 | 135 |
| MS.gene059228.t1 | AT1G69180 | 39.490 | 157 | 77 | 2 | 22 | 178 | 18 | 156 | 9.57e-31 | 112 |
Find 56 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATTAGCAGGTGGAGGTTT+AGG | 0.195251 | 4.1:+73042967 | None:intergenic |
| ATCATCAAATCATTTGGATT+TGG | 0.277959 | 4.1:+73043024 | None:intergenic |
| CACTTTCCACACATTCATTT+CGG | 0.297543 | 4.1:-73040788 | MS.gene059228:CDS |
| CTTCAACCCTCAAACTCTTA+TGG | 0.305185 | 4.1:-73043454 | MS.gene059228:intron |
| AGAGTTGTTGCTGTTGTTGC+TGG | 0.315337 | 4.1:+73043774 | None:intergenic |
| TATTAGCAGGTGGAGGTTTA+GGG | 0.330394 | 4.1:+73042968 | None:intergenic |
| GCCTCTCTGTGGCTTATATC+AGG | 0.334060 | 4.1:+73041020 | None:intergenic |
| TTCTTCACGGGTTGATGATC+AGG | 0.349751 | 4.1:+73040758 | None:intergenic |
| AACAAACACACTTCTTTAGT+AGG | 0.360387 | 4.1:+73040512 | None:intergenic |
| GTGTTCATCATCAAATCATT+TGG | 0.376681 | 4.1:+73043018 | None:intergenic |
| TTACTTGATGAAGCGGTTGT+AGG | 0.396976 | 4.1:+73041959 | None:intergenic |
| TGTCCAAGGTGAAGTTGATT+TGG | 0.407277 | 4.1:+73043483 | None:intergenic |
| TGTTGCTGTTGTTGCTGGTC+CGG | 0.423782 | 4.1:+73043779 | None:intergenic |
| GAGGACGTGCTTATGAAAGA+TGG | 0.432558 | 4.1:-73040567 | MS.gene059228:CDS |
| TTCATCATCATGTTTGTTGA+AGG | 0.455442 | 4.1:+73043054 | None:intergenic |
| AATTTCTTACGTCTATTAGC+AGG | 0.457462 | 4.1:+73042955 | None:intergenic |
| GAGATCCAACGTATCAAAGC+TGG | 0.478771 | 4.1:-73041047 | MS.gene059228:CDS |
| GAAGAAAGCTAATGTTCGTC+AGG | 0.494623 | 4.1:-73040741 | MS.gene059228:intron |
| CGAACATTAGCTTTCTTCAC+GGG | 0.494923 | 4.1:+73040746 | None:intergenic |
| ACAAACACACTTCTTTAGTA+GGG | 0.496640 | 4.1:+73040513 | None:intergenic |
| GGAACTCTCTGTCTCTTCTC+CGG | 0.501243 | 4.1:+73041987 | None:intergenic |
| CGAAATGAATGTGTGGAAAG+TGG | 0.502844 | 4.1:+73040789 | None:intergenic |
| ACACATACCATAAGAGTTTG+AGG | 0.506984 | 4.1:+73043447 | None:intergenic |
| TTGTTGCTGGTCCGGTGAAA+AGG | 0.508490 | 4.1:+73043787 | None:intergenic |
| CACATACCATAAGAGTTTGA+GGG | 0.516195 | 4.1:+73043448 | None:intergenic |
| AGGTGAAGTTGATTTGGAGC+AGG | 0.517398 | 4.1:+73043489 | None:intergenic |
| ACAGCAACAACTCTCTCCTT+CGG | 0.518591 | 4.1:-73043765 | MS.gene059228:CDS |
| TGCAATGGACATAACAAAGC+TGG | 0.526911 | 4.1:+73043741 | None:intergenic |
| ATTAAACTTACTTGATGAAG+CGG | 0.531165 | 4.1:+73041952 | None:intergenic |
| ACGAACATTAGCTTTCTTCA+CGG | 0.533864 | 4.1:+73040745 | None:intergenic |
| TTACGTCTATTAGCAGGTGG+AGG | 0.545636 | 4.1:+73042961 | None:intergenic |
| CTGGTCCGGTGAAAAGGAAG+TGG | 0.549720 | 4.1:+73043793 | None:intergenic |
| AGGACGTGCTTATGAAAGAT+GGG | 0.553995 | 4.1:-73040566 | MS.gene059228:CDS |
| TTTCATTGTGTAGGATTCAG+AGG | 0.560695 | 4.1:-73040586 | MS.gene059228:intron |
| ATGAAGCGGTTGTAGGCAGA+TGG | 0.560728 | 4.1:+73041966 | None:intergenic |
| TTCTTACGTCTATTAGCAGG+TGG | 0.566691 | 4.1:+73042958 | None:intergenic |
| GATTCCCAGCTTTGATACGT+TGG | 0.580008 | 4.1:+73041042 | None:intergenic |
| GAAGTTGATTTGGAGCAGGA+AGG | 0.583401 | 4.1:+73043493 | None:intergenic |
| AAAGGAAGTGGATGATGAAG+AGG | 0.587043 | 4.1:+73043805 | None:intergenic |
| GCTCCAAATCAACTTCACCT+TGG | 0.591195 | 4.1:-73043486 | MS.gene059228:CDS |
| AGATCCAACGTATCAAAGCT+GGG | 0.600203 | 4.1:-73041046 | MS.gene059228:CDS |
| GAAATGAATGTGTGGAAAGT+GGG | 0.615090 | 4.1:+73040790 | None:intergenic |
| ATGATGAACACAATGAGAGG+AGG | 0.619560 | 4.1:-73043006 | MS.gene059228:CDS |
| CACGCATGTTAACTGAGAGA+AGG | 0.621310 | 4.1:+73043523 | None:intergenic |
| CATGTTAACTGAGAGAAGGT+TGG | 0.622869 | 4.1:+73043527 | None:intergenic |
| TGATGAACACAATGAGAGGA+GGG | 0.625320 | 4.1:-73043005 | MS.gene059228:CDS |
| ACATAACAAAGCTGGTCCGA+AGG | 0.642303 | 4.1:+73043749 | None:intergenic |
| GGTTGAAGTAAGTGTGTCCA+AGG | 0.648511 | 4.1:+73043469 | None:intergenic |
| GTCTTGAACAAACTTGTGCA+AGG | 0.649953 | 4.1:+73043576 | None:intergenic |
| CAGTGTCACAGAAATTGCAA+TGG | 0.650774 | 4.1:+73043726 | None:intergenic |
| TTTCTGTGACACTGTTCTCG+CGG | 0.670363 | 4.1:-73043717 | MS.gene059228:intron |
| CTGCACTAAAAGCCTCTCTG+TGG | 0.673003 | 4.1:+73041009 | None:intergenic |
| AAGACTGTGACAGTGAGATG+TGG | 0.685505 | 4.1:-73043558 | MS.gene059228:CDS |
| TTGATGATGAACACAATGAG+AGG | 0.686722 | 4.1:-73043009 | MS.gene059228:CDS |
| TCCTGATATAAGCCACAGAG+AGG | 0.691291 | 4.1:-73041021 | MS.gene059228:CDS |
| ATAAGTCCGAAATGAATGTG+TGG | 0.723401 | 4.1:+73040782 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATTTTTTTTAATTAATT+TGG | + | chr4.1:73041878-73041897 | None:intergenic | 0.0% |
| !!! | ATATAATTTTTAATTTTTAT+TGG | - | chr4.1:73043440-73043459 | MS.gene059228:intron | 0.0% |
| !!! | TATAATTTTTAATTTTTATT+GGG | - | chr4.1:73043441-73043460 | MS.gene059228:intron | 0.0% |
| !! | AAATTGAAAATAATCTAAAA+TGG | + | chr4.1:73043411-73043430 | None:intergenic | 10.0% |
| !! | AAGAAAAAAAGAAAAAAAAA+AGG | + | chr4.1:73043663-73043682 | None:intergenic | 10.0% |
| !! | AATCTTAACTATTAATTAAA+AGG | + | chr4.1:73040696-73040715 | None:intergenic | 10.0% |
| !! | ATCTTAACTATTAATTAAAA+GGG | + | chr4.1:73040695-73040714 | None:intergenic | 10.0% |
| !! | TTTCTTTATCAAAAAAAAAT+TGG | - | chr4.1:73041945-73041964 | MS.gene059228:intron | 10.0% |
| !!! | AAATCTATTTAAACTTTTTT+AGG | - | chr4.1:73042059-73042078 | MS.gene059228:intron | 10.0% |
| !!! | AATTGAAAATAATCTAAAAT+GGG | + | chr4.1:73043410-73043429 | None:intergenic | 10.0% |
| !!! | TTTTTTATTTTGTTTTTCTT+AGG | - | chr4.1:73040729-73040748 | MS.gene059228:intron | 10.0% |
| !! | AAGAAAAATAAATTCATAAG+TGG | + | chr4.1:73043143-73043162 | None:intergenic | 15.0% |
| !! | ATCAATTTATGAAATTATCT+AGG | - | chr4.1:73041090-73041109 | MS.gene059228:intron | 15.0% |
| !! | CTCTAATTTGAAAATAATAT+TGG | + | chr4.1:73041906-73041925 | None:intergenic | 15.0% |
| !! | GGTTTAATTAATTATTATTC+AGG | - | chr4.1:73041242-73041261 | MS.gene059228:intron | 15.0% |
| !! | TACTTCAAAATATTTACTAA+AGG | - | chr4.1:73042020-73042039 | MS.gene059228:intron | 15.0% |
| !! | TTAATTAATTATTATTCAGG+AGG | - | chr4.1:73041245-73041264 | MS.gene059228:intron | 15.0% |
| !! | TTGAAGATTTGTAAATTTAA+TGG | - | chr4.1:73041043-73041062 | MS.gene059228:CDS | 15.0% |
| !!! | AAAATATGATTTGATTTTCA+GGG | - | chr4.1:73043264-73043283 | MS.gene059228:intron | 15.0% |
| !!! | AATCAAATCATATTTTATCA+AGG | + | chr4.1:73043260-73043279 | None:intergenic | 15.0% |
| !!! | CATTCATTTTAAGTTATTTA+TGG | - | chr4.1:73042409-73042428 | MS.gene059228:intron | 15.0% |
| !!! | TAAAATATGATTTGATTTTC+AGG | - | chr4.1:73043263-73043282 | MS.gene059228:intron | 15.0% |
| !!! | TGTAAATTTAATGGATTATT+TGG | - | chr4.1:73041052-73041071 | MS.gene059228:CDS | 15.0% |
| !!! | TTTTCTTTTTTTCTTTCTTT+TGG | - | chr4.1:73043668-73043687 | MS.gene059228:intron | 15.0% |
| !!! | TTTTTTACTAAAAATGGTAT+GGG | - | chr4.1:73043018-73043037 | MS.gene059228:CDS | 15.0% |
| !!! | TTTTTTGATAAAGAAAATGT+TGG | + | chr4.1:73041941-73041960 | None:intergenic | 15.0% |
| !!! | TTTTTTTACTAAAAATGGTA+TGG | - | chr4.1:73043017-73043036 | MS.gene059228:CDS | 15.0% |
| !! | AAAGAAAATGTTGGAAATTA+GGG | + | chr4.1:73041932-73041951 | None:intergenic | 20.0% |
| !! | AAGGAAATCATTATCATAAA+AGG | - | chr4.1:73042673-73042692 | MS.gene059228:intron | 20.0% |
| !! | AGAGAAAAATTATAATGATG+AGG | - | chr4.1:73042198-73042217 | MS.gene059228:intron | 20.0% |
| !! | ATACCCTAATATTTAAAGAA+TGG | - | chr4.1:73042607-73042626 | MS.gene059228:intron | 20.0% |
| !! | TAAAGAAAATGTTGGAAATT+AGG | + | chr4.1:73041933-73041952 | None:intergenic | 20.0% |
| !! | TACCCTAATATTTAAAGAAT+GGG | - | chr4.1:73042608-73042627 | MS.gene059228:intron | 20.0% |
| !!! | ATATATATATGTAGTTTGCT+TGG | + | chr4.1:73041013-73041032 | None:intergenic | 20.0% |
| !!! | ATGATAATGATTTCCTTTTT+TGG | + | chr4.1:73042670-73042689 | None:intergenic | 20.0% |
| !!! | ATTTTCAAATGAGTTTTGAT+AGG | + | chr4.1:73041734-73041753 | None:intergenic | 20.0% |
| !!! | ATTTTTGTATTCTGGAAATT+AGG | - | chr4.1:73041163-73041182 | MS.gene059228:intron | 20.0% |
| !!! | GATAATTCATTTAACTTTAG+TGG | - | chr4.1:73043180-73043199 | MS.gene059228:intron | 20.0% |
| !!! | TGTATTATTTTCTCATTTGT+GGG | - | chr4.1:73043499-73043518 | MS.gene059228:CDS | 20.0% |
| !!! | TGTTTTGTATTTTTGTATTC+TGG | - | chr4.1:73041155-73041174 | MS.gene059228:intron | 20.0% |
| !!! | TTTTCAAATGAGTTTTGATA+GGG | + | chr4.1:73041733-73041752 | None:intergenic | 20.0% |
| !!! | TTTTGCTTTTCTTCATTAAT+TGG | + | chr4.1:73041686-73041705 | None:intergenic | 20.0% |
| ! | ACTCTTGATAAATTCCTTAA+GGG | + | chr4.1:73042810-73042829 | None:intergenic | 25.0% |
| ! | ACTGGTTAAACATACTAAAA+AGG | + | chr4.1:73042763-73042782 | None:intergenic | 25.0% |
| ! | AGTAAGATTCAGAATTTCAT+TGG | + | chr4.1:73043371-73043390 | None:intergenic | 25.0% |
| ! | ATCATCAAATCATTTGGATT+TGG | + | chr4.1:73041315-73041334 | None:intergenic | 25.0% |
| ! | ATTAAACTTACTTGATGAAG+CGG | + | chr4.1:73042387-73042406 | None:intergenic | 25.0% |
| ! | CAAAAAAGAGAAGGAAAAAA+AGG | - | chr4.1:73041701-73041720 | MS.gene059228:intron | 25.0% |
| ! | CAAAAATACAAAACAACCAT+AGG | + | chr4.1:73041150-73041169 | None:intergenic | 25.0% |
| ! | CTAAAATTCTTTCATTGTGT+AGG | - | chr4.1:73043741-73043760 | MS.gene059228:CDS | 25.0% |
| ! | GAACTTCAAAAAATGTTCAA+AGG | + | chr4.1:73043082-73043101 | None:intergenic | 25.0% |
| ! | GACCCATTCTTTAAATATTA+GGG | + | chr4.1:73042613-73042632 | None:intergenic | 25.0% |
| ! | TACTCTTGATAAATTCCTTA+AGG | + | chr4.1:73042811-73042830 | None:intergenic | 25.0% |
| ! | TGACCCATTCTTTAAATATT+AGG | + | chr4.1:73042614-73042633 | None:intergenic | 25.0% |
| !! | AAAGCATAACTCTTATTTCT+AGG | - | chr4.1:73043707-73043726 | MS.gene059228:intron | 25.0% |
| !! | AACTCAAAAGAAGTGTAAAA+TGG | + | chr4.1:73041645-73041664 | None:intergenic | 25.0% |
| !! | AGTACACATTTTTATTGCAT+CGG | - | chr4.1:73043476-73043495 | MS.gene059228:CDS | 25.0% |
| !! | CTACACAATGAAAGAATTTT+AGG | + | chr4.1:73043743-73043762 | None:intergenic | 25.0% |
| !! | GTATTATTTTCTCATTTGTG+GGG | - | chr4.1:73043500-73043519 | MS.gene059228:CDS | 25.0% |
| !! | GTGTATTATTTTCTCATTTG+TGG | - | chr4.1:73043498-73043517 | MS.gene059228:CDS | 25.0% |
| !! | TTTGCTGATTATGAGAAATT+TGG | - | chr4.1:73041221-73041240 | MS.gene059228:intron | 25.0% |
| !!! | AAGCATAACTCTTATTTCTA+GGG | - | chr4.1:73043708-73043727 | MS.gene059228:intron | 25.0% |
| !!! | CAACATTTCTTTTTTGACAA+AGG | - | chr4.1:73042831-73042850 | MS.gene059228:intron | 25.0% |
| !!! | TATACAACTATCTTTTGAGT+TGG | - | chr4.1:73041186-73041205 | MS.gene059228:intron | 25.0% |
| !!! | TCCATTTATTTTCTTTCAGT+GGG | - | chr4.1:73043523-73043542 | MS.gene059228:CDS | 25.0% |
| AAAAATAGAGCTGAATCCAT+TGG | - | chr4.1:73042161-73042180 | MS.gene059228:intron | 30.0% | |
| AATTTCTTACGTCTATTAGC+AGG | + | chr4.1:73041384-73041403 | None:intergenic | 30.0% | |
| ACAATTTAATTGTGGAGAAG+TGG | - | chr4.1:73042488-73042507 | MS.gene059228:intron | 30.0% | |
| ATTCTGAATCTTACTCTCTT+AGG | - | chr4.1:73043376-73043395 | MS.gene059228:intron | 30.0% | |
| GAAGAAAAGCAAAAAAGAGA+AGG | - | chr4.1:73041692-73041711 | MS.gene059228:intron | 30.0% | |
| GTGTTCATCATCAAATCATT+TGG | + | chr4.1:73041321-73041340 | None:intergenic | 30.0% | |
| TAAATGTAGATAGCTAGCTA+GGG | + | chr4.1:73043632-73043651 | None:intergenic | 30.0% | |
| TTTCTTGATGTACTTCAAAG+TGG | - | chr4.1:73041765-73041784 | MS.gene059228:intron | 30.0% | |
| ! | ATATCGCATTTTATATGCAG+GGG | + | chr4.1:73042537-73042556 | None:intergenic | 30.0% |
| ! | GATATCGCATTTTATATGCA+GGG | + | chr4.1:73042538-73042557 | None:intergenic | 30.0% |
| ! | GTTTATAAAGAGAAAGTGTG+AGG | + | chr4.1:73040658-73040677 | None:intergenic | 30.0% |
| ! | TTCATCATCATGTTTGTTGA+AGG | + | chr4.1:73041285-73041304 | None:intergenic | 30.0% |
| ! | TTTTTCACACAAGCAAATGT+AGG | - | chr4.1:73043793-73043812 | MS.gene059228:CDS | 30.0% |
| !! | GTCCATTTATTTTCTTTCAG+TGG | - | chr4.1:73043522-73043541 | MS.gene059228:CDS | 30.0% |
| !! | GTTAATTTTTGTTGTGCCTA+TGG | - | chr4.1:73041131-73041150 | MS.gene059228:intron | 30.0% |
| !!! | ACTATCTTTTGAGTTGGAAT+TGG | - | chr4.1:73041192-73041211 | MS.gene059228:intron | 30.0% |
| !!! | TTTTGAGTTGGAATTGGAAA+GGG | - | chr4.1:73041198-73041217 | MS.gene059228:intron | 30.0% |
| ACACATACCATAAGAGTTTG+AGG | + | chr4.1:73040892-73040911 | None:intergenic | 35.0% | |
| ACATGAGAAATGGTGAAGAA+GGG | + | chr4.1:73041508-73041527 | None:intergenic | 35.0% | |
| AGCATAGCATACATGAGAAA+TGG | + | chr4.1:73041518-73041537 | None:intergenic | 35.0% | |
| AGTTGTCAGAGTTTGAATCT+CGG | - | chr4.1:73040960-73040979 | MS.gene059228:intron | 35.0% | |
| ATAAGTCCGAAATGAATGTG+TGG | + | chr4.1:73043557-73043576 | None:intergenic | 35.0% | |
| CACATACCATAAGAGTTTGA+GGG | + | chr4.1:73040891-73040910 | None:intergenic | 35.0% | |
| CACTTTCCACACATTCATTT+CGG | - | chr4.1:73043548-73043567 | MS.gene059228:CDS | 35.0% | |
| CTGGTTAAGCATACCAAAAA+AGG | - | chr4.1:73042654-73042673 | MS.gene059228:intron | 35.0% | |
| GAAATGAATGTGTGGAAAGT+GGG | + | chr4.1:73043549-73043568 | None:intergenic | 35.0% | |
| GAAGTGTAAAATGGACAGAA+GGG | + | chr4.1:73041636-73041655 | None:intergenic | 35.0% | |
| GAGCTCACACAATTTAATTG+TGG | - | chr4.1:73042480-73042499 | MS.gene059228:intron | 35.0% | |
| GCCCACTGAAAGAAAATAAA+TGG | + | chr4.1:73043527-73043546 | None:intergenic | 35.0% | |
| GTAAATGTAGATAGCTAGCT+AGG | + | chr4.1:73043633-73043652 | None:intergenic | 35.0% | |
| TACATGAGAAATGGTGAAGA+AGG | + | chr4.1:73041509-73041528 | None:intergenic | 35.0% | |
| TTTCATTGTGTAGGATTCAG+AGG | - | chr4.1:73043750-73043769 | MS.gene059228:CDS | 35.0% | |
| ! | AGAAGTGTAAAATGGACAGA+AGG | + | chr4.1:73041637-73041656 | None:intergenic | 35.0% |
| ! | GAAAGAAGAGAGTTCTGATT+AGG | - | chr4.1:73042262-73042281 | MS.gene059228:intron | 35.0% |
| ! | GGATATCGCATTTTATATGC+AGG | + | chr4.1:73042539-73042558 | None:intergenic | 35.0% |
| ! | TTTTCCTACCTTTCTCATGA+TGG | + | chr4.1:73041592-73041611 | None:intergenic | 35.0% |
| ! | TTTTGATGCCATCATGAGAA+AGG | - | chr4.1:73041581-73041600 | MS.gene059228:intron | 35.0% |
| !! | ACGAACATTAGCTTTCTTCA+CGG | + | chr4.1:73043594-73043613 | None:intergenic | 35.0% |
| !! | CAAATGAGTTTTGATAGGGA+TGG | + | chr4.1:73041729-73041748 | None:intergenic | 35.0% |
| !! | GCTGAAACACTTTTAAGAAG+AGG | + | chr4.1:73040987-73041006 | None:intergenic | 35.0% |
| !! | TCATTTTTCAGCCCTAGATT+TGG | + | chr4.1:73041983-73042002 | None:intergenic | 35.0% |
| !! | TGGATTCAGCTCTATTTTTC+CGG | + | chr4.1:73042160-73042179 | None:intergenic | 35.0% |
| !! | TTGATGATGAACACAATGAG+AGG | - | chr4.1:73041327-73041346 | MS.gene059228:intron | 35.0% |
| !!! | CTTTTGAGTTGGAATTGGAA+AGG | - | chr4.1:73041197-73041216 | MS.gene059228:intron | 35.0% |
| !!! | TTTTTTGTCAAGTAGCCTAG+TGG | - | chr4.1:73042454-73042473 | MS.gene059228:intron | 35.0% |
| AAAATGGACAGAAGGGTTTC+AGG | + | chr4.1:73041629-73041648 | None:intergenic | 40.0% | |
| AAAGAATGGGTCATGCTAAC+CGG | - | chr4.1:73042621-73042640 | MS.gene059228:intron | 40.0% | |
| AAAGGAAGTGGATGATGAAG+AGG | + | chr4.1:73040534-73040553 | None:intergenic | 40.0% | |
| AGAAGCCGTATACCAAATCT+AGG | - | chr4.1:73041968-73041987 | MS.gene059228:CDS | 40.0% | |
| AGATCCAACGTATCAAAGCT+GGG | - | chr4.1:73043290-73043309 | MS.gene059228:intron | 40.0% | |
| AGGACGTGCTTATGAAAGAT+GGG | - | chr4.1:73043770-73043789 | MS.gene059228:CDS | 40.0% | |
| ATGATGAACACAATGAGAGG+AGG | - | chr4.1:73041330-73041349 | MS.gene059228:intron | 40.0% | |
| CAGTGTCACAGAAATTGCAA+TGG | + | chr4.1:73040613-73040632 | None:intergenic | 40.0% | |
| CATGTTAACTGAGAGAAGGT+TGG | + | chr4.1:73040812-73040831 | None:intergenic | 40.0% | |
| CGAAATGAATGTGTGGAAAG+TGG | + | chr4.1:73043550-73043569 | None:intergenic | 40.0% | |
| CTCTAACAATCACTCTCCAA+TGG | + | chr4.1:73042180-73042199 | None:intergenic | 40.0% | |
| CTTCAACCCTCAAACTCTTA+TGG | - | chr4.1:73040882-73040901 | MS.gene059228:intron | 40.0% | |
| GAAGAAAGCTAATGTTCGTC+AGG | - | chr4.1:73043595-73043614 | MS.gene059228:intron | 40.0% | |
| GAAGCCGTATACCAAATCTA+GGG | - | chr4.1:73041969-73041988 | MS.gene059228:CDS | 40.0% | |
| GTCTTGAACAAACTTGTGCA+AGG | + | chr4.1:73040763-73040782 | None:intergenic | 40.0% | |
| TATTAGCAGGTGGAGGTTTA+GGG | + | chr4.1:73041371-73041390 | None:intergenic | 40.0% | |
| TCACTCAATGTTTGCATGCA+AGG | + | chr4.1:73042122-73042141 | None:intergenic | 40.0% | |
| TGATGAACACAATGAGAGGA+GGG | - | chr4.1:73041331-73041350 | MS.gene059228:intron | 40.0% | |
| TGCAATGGACATAACAAAGC+TGG | + | chr4.1:73040598-73040617 | None:intergenic | 40.0% | |
| TTACTTGATGAAGCGGTTGT+AGG | + | chr4.1:73042380-73042399 | None:intergenic | 40.0% | |
| TTCTTACGTCTATTAGCAGG+TGG | + | chr4.1:73041381-73041400 | None:intergenic | 40.0% | |
| ! | ATCATCCACTTCCTTTTCAC+CGG | - | chr4.1:73040538-73040557 | MS.gene059228:CDS | 40.0% |
| ! | TCAGCCCTAGATTTGGTATA+CGG | + | chr4.1:73041976-73041995 | None:intergenic | 40.0% |
| ! | TGTCCAAGGTGAAGTTGATT+TGG | + | chr4.1:73040856-73040875 | None:intergenic | 40.0% |
| !! | ATTCAGCTCTATTTTTCCGG+GGG | + | chr4.1:73042157-73042176 | None:intergenic | 40.0% |
| !! | CGAACATTAGCTTTCTTCAC+GGG | + | chr4.1:73043593-73043612 | None:intergenic | 40.0% |
| !! | GATTCAGCTCTATTTTTCCG+GGG | + | chr4.1:73042158-73042177 | None:intergenic | 40.0% |
| !! | GGATTCAGCTCTATTTTTCC+GGG | + | chr4.1:73042159-73042178 | None:intergenic | 40.0% |
| AAGACTGTGACAGTGAGATG+TGG | - | chr4.1:73040778-73040797 | MS.gene059228:CDS | 45.0% | |
| ACAGCAACAACTCTCTCCTT+CGG | - | chr4.1:73040571-73040590 | MS.gene059228:CDS | 45.0% | |
| ACATAACAAAGCTGGTCCGA+AGG | + | chr4.1:73040590-73040609 | None:intergenic | 45.0% | |
| AGTATGTTTAACCAGTGCCC+AGG | - | chr4.1:73042767-73042786 | MS.gene059228:intron | 45.0% | |
| CACGCATGTTAACTGAGAGA+AGG | + | chr4.1:73040816-73040835 | None:intergenic | 45.0% | |
| CTATTAGCAGGTGGAGGTTT+AGG | + | chr4.1:73041372-73041391 | None:intergenic | 45.0% | |
| GAGATCCAACGTATCAAAGC+TGG | - | chr4.1:73043289-73043308 | MS.gene059228:intron | 45.0% | |
| GAGGACGTGCTTATGAAAGA+TGG | - | chr4.1:73043769-73043788 | MS.gene059228:CDS | 45.0% | |
| GATGCCATCATGAGAAAGGT+AGG | - | chr4.1:73041585-73041604 | MS.gene059228:intron | 45.0% | |
| GCTCCAAATCAACTTCACCT+TGG | - | chr4.1:73040850-73040869 | MS.gene059228:intron | 45.0% | |
| GGTTGAAGTAAGTGTGTCCA+AGG | + | chr4.1:73040870-73040889 | None:intergenic | 45.0% | |
| GTATGTTTAACCAGTGCCCA+GGG | - | chr4.1:73042768-73042787 | MS.gene059228:intron | 45.0% | |
| TACCAACTGAGCTAAGCTCA+CGG | - | chr4.1:73042560-73042579 | MS.gene059228:intron | 45.0% | |
| TATGTTTAACCAGTGCCCAG+GGG | - | chr4.1:73042769-73042788 | MS.gene059228:intron | 45.0% | |
| TCCTGATATAAGCCACAGAG+AGG | - | chr4.1:73043315-73043334 | MS.gene059228:intron | 45.0% | |
| TCCTTAAGGGAAATGCTAGC+CGG | + | chr4.1:73042797-73042816 | None:intergenic | 45.0% | |
| TTACGTCTATTAGCAGGTGG+AGG | + | chr4.1:73041378-73041397 | None:intergenic | 45.0% | |
| TTTCTGTGACACTGTTCTCG+CGG | - | chr4.1:73040619-73040638 | MS.gene059228:intron | 45.0% | |
| ! | AGAGTTGTTGCTGTTGTTGC+TGG | + | chr4.1:73040565-73040584 | None:intergenic | 45.0% |
| ! | GATTCCCAGCTTTGATACGT+TGG | + | chr4.1:73043297-73043316 | None:intergenic | 45.0% |
| ! | TGAGCTTAGCTCAGTTGGTA+GGG | + | chr4.1:73042560-73042579 | None:intergenic | 45.0% |
| !! | AGGTGAAGTTGATTTGGAGC+AGG | + | chr4.1:73040850-73040869 | None:intergenic | 45.0% |
| !! | GAAGTTGATTTGGAGCAGGA+AGG | + | chr4.1:73040846-73040865 | None:intergenic | 45.0% |
| !! | TTCTTCACGGGTTGATGATC+AGG | + | chr4.1:73043581-73043600 | None:intergenic | 45.0% |
| !!! | AAACATTTTTTTTTATATTA+CGG | - | chr4.1:73043115-73043134 | MS.gene059228:intron | 5.0% |
| !!! | ATAAACATTTTTTATTTTTA+TGG | - | chr4.1:73042872-73042891 | MS.gene059228:intron | 5.0% |
| !!! | ATTTATTTTTTTACTAAAAA+TGG | - | chr4.1:73043012-73043031 | MS.gene059228:CDS | 5.0% |
| !!! | TTTTTTTTTTTTACTAAAAA+TGG | - | chr4.1:73043047-73043066 | MS.gene059228:CDS | 5.0% |
| ACCAACTGAGCTAAGCTCAC+GGG | - | chr4.1:73042561-73042580 | MS.gene059228:intron | 50.0% | |
| ACCGGCTAGCATTTCCCTTA+AGG | - | chr4.1:73042793-73042812 | MS.gene059228:intron | 50.0% | |
| ATGAAGCGGTTGTAGGCAGA+TGG | + | chr4.1:73042373-73042392 | None:intergenic | 50.0% | |
| CAAACACACGGACATTGCTC+AGG | + | chr4.1:73042318-73042337 | None:intergenic | 50.0% | |
| CATTGCTCAGGCAAACAGAC+AGG | + | chr4.1:73042306-73042325 | None:intergenic | 50.0% | |
| CTGCACTAAAAGCCTCTCTG+TGG | + | chr4.1:73043330-73043349 | None:intergenic | 50.0% | |
| GAGCTGGACAAGCAAACACA+CGG | + | chr4.1:73042330-73042349 | None:intergenic | 50.0% | |
| GCCTCTCTGTGGCTTATATC+AGG | + | chr4.1:73043319-73043338 | None:intergenic | 50.0% | |
| GGAACTCTCTGTCTCTTCTC+CGG | + | chr4.1:73042352-73042371 | None:intergenic | 50.0% | |
| GTGAGACAGAATTCTTCCCC+CGG | - | chr4.1:73042138-73042157 | MS.gene059228:intron | 50.0% | |
| GTGAGCTTAGCTCAGTTGGT+AGG | + | chr4.1:73042561-73042580 | None:intergenic | 50.0% | |
| TGTGTTTGCTTGTCCAGCTC+CGG | - | chr4.1:73042330-73042349 | MS.gene059228:intron | 50.0% | |
| TTGTTGCTGGTCCGGTGAAA+AGG | + | chr4.1:73040552-73040571 | None:intergenic | 50.0% | |
| ! | CATTTTATATGCAGGGGCCG+GGG | + | chr4.1:73042531-73042550 | None:intergenic | 50.0% |
| ! | CGCATTTTATATGCAGGGGC+CGG | + | chr4.1:73042533-73042552 | None:intergenic | 50.0% |
| ! | GCATTTTATATGCAGGGGCC+GGG | + | chr4.1:73042532-73042551 | None:intergenic | 50.0% |
| ! | TGTTGCTGTTGTTGCTGGTC+CGG | + | chr4.1:73040560-73040579 | None:intergenic | 50.0% |
| ! | TTGTGGAGAAGTGGAGTGTC+CGG | - | chr4.1:73042497-73042516 | MS.gene059228:intron | 50.0% |
| ! | TTGTGTGAGCTCTAGCCACT+AGG | + | chr4.1:73042472-73042491 | None:intergenic | 50.0% |
| CCAACTGAGCTAAGCTCACG+GGG | - | chr4.1:73042562-73042581 | MS.gene059228:intron | 55.0% | |
| CTGGTCCGGTGAAAAGGAAG+TGG | + | chr4.1:73040546-73040565 | None:intergenic | 55.0% | |
| CTTAACCAGTGCCCGAACAC+CGG | + | chr4.1:73042643-73042662 | None:intergenic | 55.0% | |
| GGGTCATGCTAACCGGTGTT+CGG | - | chr4.1:73042628-73042647 | MS.gene059228:intron | 55.0% | |
| GGTCATGCTAACCGGTGTTC+GGG | - | chr4.1:73042629-73042648 | MS.gene059228:intron | 55.0% | |
| ! | TGTGGAGAAGTGGAGTGTCC+GGG | - | chr4.1:73042498-73042517 | MS.gene059228:intron | 55.0% |
| AAATGCTAGCCGGTGCCCCT+GGG | + | chr4.1:73042787-73042806 | None:intergenic | 60.0% | |
| CCCCGTGAGCTTAGCTCAGT+TGG | + | chr4.1:73042565-73042584 | None:intergenic | 60.0% | |
| CTCTGTCTCTTCTCCGGAGC+TGG | + | chr4.1:73042346-73042365 | None:intergenic | 60.0% | |
| CTGAGCTAAGCTCACGGGGA+TGG | - | chr4.1:73042566-73042585 | MS.gene059228:intron | 60.0% | |
| ! | GTGGAGAAGTGGAGTGTCCG+GGG | - | chr4.1:73042499-73042518 | MS.gene059228:intron | 60.0% |
| AGTGTCCGGGGTTCGAACCC+CGG | - | chr4.1:73042511-73042530 | MS.gene059228:intron | 65.0% | |
| GAAATGCTAGCCGGTGCCCC+TGG | + | chr4.1:73042788-73042807 | None:intergenic | 65.0% | |
| GCTAACCGGTGTTCGGGCAC+TGG | - | chr4.1:73042635-73042654 | MS.gene059228:intron | 65.0% | |
| ! | TAACCAGTGCCCAGGGGCAC+CGG | - | chr4.1:73042775-73042794 | MS.gene059228:intron | 65.0% |
| AGGGGCCGGGGTTCGAACCC+CGG | + | chr4.1:73042519-73042538 | None:intergenic | 75.0% | |
| TAGCCGGTGCCCCTGGGCAC+TGG | + | chr4.1:73042781-73042800 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 73040527 | 73043831 | 73040527 | ID=MS.gene059228 |
| chr4.1 | mRNA | 73040527 | 73043831 | 73040527 | ID=MS.gene059228.t1;Parent=MS.gene059228 |
| chr4.1 | exon | 73043718 | 73043831 | 73043718 | ID=MS.gene059228.t1.exon1;Parent=MS.gene059228.t1 |
| chr4.1 | CDS | 73043718 | 73043831 | 73043718 | ID=cds.MS.gene059228.t1;Parent=MS.gene059228.t1 |
| chr4.1 | exon | 73043455 | 73043607 | 73043455 | ID=MS.gene059228.t1.exon2;Parent=MS.gene059228.t1 |
| chr4.1 | CDS | 73043455 | 73043607 | 73043455 | ID=cds.MS.gene059228.t1;Parent=MS.gene059228.t1 |
| chr4.1 | exon | 73042965 | 73043094 | 73042965 | ID=MS.gene059228.t1.exon3;Parent=MS.gene059228.t1 |
| chr4.1 | CDS | 73042965 | 73043094 | 73042965 | ID=cds.MS.gene059228.t1;Parent=MS.gene059228.t1 |
| chr4.1 | exon | 73041963 | 73042011 | 73041963 | ID=MS.gene059228.t1.exon4;Parent=MS.gene059228.t1 |
| chr4.1 | CDS | 73041963 | 73042011 | 73041963 | ID=cds.MS.gene059228.t1;Parent=MS.gene059228.t1 |
| chr4.1 | exon | 73040998 | 73041073 | 73040998 | ID=MS.gene059228.t1.exon5;Parent=MS.gene059228.t1 |
| chr4.1 | CDS | 73040998 | 73041073 | 73040998 | ID=cds.MS.gene059228.t1;Parent=MS.gene059228.t1 |
| chr4.1 | exon | 73040742 | 73040816 | 73040742 | ID=MS.gene059228.t1.exon6;Parent=MS.gene059228.t1 |
| chr4.1 | CDS | 73040742 | 73040816 | 73040742 | ID=cds.MS.gene059228.t1;Parent=MS.gene059228.t1 |
| chr4.1 | exon | 73040527 | 73040595 | 73040527 | ID=MS.gene059228.t1.exon7;Parent=MS.gene059228.t1 |
| chr4.1 | CDS | 73040527 | 73040595 | 73040527 | ID=cds.MS.gene059228.t1;Parent=MS.gene059228.t1 |
| Gene Sequence |
| Protein sequence |
