AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene42837

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42837.t1 MTR_2g093740 93.951 810 48 1 1 809 1 810 0.0 1544
MS.gene42837.t1 MTR_2g093740 92.467 823 48 2 1 809 1 823 0.0 1533
MS.gene42837.t1 MTR_2g093740 93.867 750 45 1 1 749 1 750 0.0 1427
MS.gene42837.t1 MTR_2g093740 92.267 763 45 2 1 749 1 763 0.0 1416
MS.gene42837.t1 MTR_2g093740 94.083 676 39 1 135 809 5 680 0.0 1329
MS.gene42837.t1 MTR_2g093740 92.308 689 39 2 135 809 5 693 0.0 1318
MS.gene42837.t1 MTR_2g093740 93.595 687 43 1 1 686 1 687 0.0 1301
MS.gene42837.t1 MTR_2g093740 91.857 700 43 2 1 686 1 700 0.0 1289
MS.gene42837.t1 MTR_2g093740 93.994 616 36 1 135 749 5 620 0.0 1212
MS.gene42837.t1 MTR_2g093740 92.051 629 36 2 135 749 5 633 0.0 1200
MS.gene42837.t1 MTR_4g060460 73.374 815 183 12 1 809 1 787 0.0 1138
MS.gene42837.t1 MTR_4g060460 73.016 819 184 12 1 809 1 792 0.0 1137
MS.gene42837.t1 MTR_4g088210 42.587 634 325 13 51 666 33 645 2.06e-148 452
MS.gene42837.t1 MTR_4g088210 42.587 634 325 13 51 666 33 645 2.89e-148 452
MS.gene42837.t1 MTR_2g014770 50.413 484 202 13 55 523 52 512 1.34e-145 444
MS.gene42837.t1 MTR_2g014770 55.037 407 160 8 55 454 52 442 4.56e-141 430
MS.gene42837.t1 MTR_8g100050 46.234 478 236 9 1 472 7 469 1.29e-136 422
MS.gene42837.t1 MTR_8g100050 47.198 464 225 8 14 472 21 469 1.14e-135 423
MS.gene42837.t1 MTR_8g100050 49.038 104 53 0 676 779 705 808 5.06e-29 124
MS.gene42837.t1 MTR_2g005240 51.169 385 169 5 36 418 7 374 2.44e-126 394
MS.gene42837.t1 MTR_2g005240 46.154 130 66 2 673 798 539 668 9.06e-27 117
MS.gene42837.t1 MTR_5g076270 48.889 405 172 10 56 452 24 401 3.35e-112 362
MS.gene42837.t1 MTR_5g076270 35.971 139 81 4 634 769 670 803 6.80e-18 89.0
MS.gene42837.t1 MTR_8g027440 50.420 357 160 7 54 408 27 368 5.40e-112 356
MS.gene42837.t1 MTR_8g027440 51.579 95 45 1 681 775 558 651 2.85e-23 105
MS.gene42837.t1 MTR_2g018690 51.648 364 162 6 56 416 23 375 7.42e-112 362
MS.gene42837.t1 MTR_2g018690 39.394 132 74 4 648 775 743 872 8.84e-20 95.1
MS.gene42837.t1 MTR_3g064050 52.809 356 146 7 56 404 26 366 6.30e-111 358
MS.gene42837.t1 MTR_3g064050 41.026 117 60 3 661 769 696 811 9.33e-18 88.6
MS.gene42837.t1 MTR_8g079492 50.689 363 166 5 56 416 23 374 6.01e-110 357
MS.gene42837.t1 MTR_8g079492 37.302 126 75 3 647 769 745 869 2.47e-18 90.5
MS.gene42837.t1 MTR_8g079492 50.689 363 166 5 56 416 23 374 6.60e-110 357
MS.gene42837.t1 MTR_8g079492 37.302 126 75 3 647 769 746 870 2.49e-18 90.5
MS.gene42837.t1 MTR_4g021580 49.284 349 161 5 56 402 19 353 1.04e-107 343
MS.gene42837.t1 MTR_4g021580 46.429 84 41 2 665 748 542 621 3.78e-14 76.6
MS.gene42837.t1 MTR_4g021580 49.284 349 161 5 56 402 19 353 2.23e-107 344
MS.gene42837.t1 MTR_4g021580 46.296 108 54 2 665 772 542 645 1.12e-20 97.8
MS.gene42837.t1 MTR_7g062540 45.244 389 195 8 54 439 12 385 1.24e-106 342
MS.gene42837.t1 MTR_7g062540 47.222 108 53 2 665 772 557 660 7.38e-23 104
MS.gene42837.t1 MTR_1g024025 52.137 351 153 6 56 403 43 381 4.75e-105 351
MS.gene42837.t1 MTR_1g024025 41.346 104 59 2 681 783 754 856 1.23e-16 85.5
MS.gene42837.t1 MTR_4g124900 52.174 345 153 4 56 399 23 356 3.80e-102 340
MS.gene42837.t1 MTR_4g124900 47.423 97 49 2 676 771 965 1060 3.45e-21 100
MS.gene42837.t1 MTR_4g124900 52.174 345 153 4 56 399 23 356 4.82e-102 340
MS.gene42837.t1 MTR_4g124900 47.423 97 49 2 676 771 988 1083 3.37e-21 100
MS.gene42837.t1 MTR_2g043250 51.014 345 157 4 56 399 23 356 3.19e-100 335
MS.gene42837.t1 MTR_2g043250 47.423 97 49 2 676 771 981 1076 4.40e-20 96.7
MS.gene42837.t1 MTR_8g101360 48.179 357 157 6 56 402 31 369 4.80e-92 313
MS.gene42837.t1 MTR_8g101360 47.826 92 46 2 681 771 984 1074 3.80e-20 96.7
MS.gene42837.t1 MTR_8g079492 50.498 301 137 4 117 416 3 292 3.75e-88 297
MS.gene42837.t1 MTR_8g079492 37.302 126 75 3 647 769 663 787 2.69e-18 90.5
MS.gene42837.t1 MTR_2g094570 41.732 381 168 11 56 398 11 375 4.66e-79 268
MS.gene42837.t1 MTR_2g094570 41.732 381 168 10 56 398 11 375 5.46e-79 269
MS.gene42837.t1 MTR_2g094570 41.470 381 169 10 56 398 67 431 1.48e-78 269
MS.gene42837.t1 MTR_1g064430 36.930 417 201 9 56 428 27 425 3.14e-75 258
MS.gene42837.t1 MTR_1g064430 36.930 417 201 9 56 428 40 438 4.15e-75 258
MS.gene42837.t1 MTR_1g094960 37.887 388 192 6 56 408 19 392 1.59e-72 249
MS.gene42837.t1 MTR_8g446900 40.645 310 164 5 95 402 1 292 1.65e-72 242
MS.gene42837.t1 MTR_4g058930 37.783 397 187 7 56 408 12 392 2.32e-70 244
MS.gene42837.t1 MTR_4g058930 37.783 397 187 7 56 408 12 392 3.64e-70 245
MS.gene42837.t1 MTR_7g101280 36.111 396 192 8 56 404 31 412 5.57e-65 229
MS.gene42837.t1 MTR_0041s0110 36.111 396 192 8 56 404 31 412 5.57e-65 229
MS.gene42837.t1 MTR_3g073420 36.317 391 195 10 56 406 19 395 4.00e-59 212
MS.gene42837.t1 MTR_7g101275 39.172 314 174 7 65 376 1 299 1.22e-58 205
MS.gene42837.t1 MTR_5g061220 33.090 411 221 12 36 415 2 389 3.25e-55 199
MS.gene42837.t1 MTR_5g040880 34.146 369 207 12 56 416 11 351 3.09e-53 194
MS.gene42837.t1 MTR_2g024430 33.512 373 202 11 56 415 20 359 2.11e-51 188
MS.gene42837.t1 MTR_5g082140 34.748 377 203 12 56 420 12 357 1.07e-49 182
MS.gene42837.t1 MTR_5g040740 35.342 365 189 15 56 410 12 339 2.92e-48 176
MS.gene42837.t1 MTR_0041s0120 35.030 334 172 8 65 376 1 311 1.04e-47 175
MS.gene42837.t1 MTR_1g058210 28.726 369 239 7 56 420 12 360 6.46e-44 165
MS.gene42837.t1 MTR_2g006270 29.091 385 248 8 56 437 13 375 2.10e-40 155
MS.gene42837.t1 MTR_2g006380 31.565 377 214 16 51 419 15 355 3.96e-38 149
MS.gene42837.t1 MTR_5g060630 30.052 386 224 14 56 408 12 384 6.56e-37 146
MS.gene42837.t1 MTR_5g460740 30.052 386 224 14 56 408 12 384 6.56e-37 146
MS.gene42837.t1 MTR_5g062970 33.014 209 128 3 56 264 38 234 2.57e-32 126
MS.gene42837.t1 MTR_5g060780 28.652 356 223 11 56 402 12 345 6.19e-30 123
MS.gene42837.t1 MTR_5g460920 28.652 356 223 11 56 402 12 345 7.33e-30 123
MS.gene42837.t1 MTR_5g061890 29.412 357 219 13 56 402 12 345 2.08e-28 119
MS.gene42837.t1 MTR_3g064050 43.077 130 72 2 276 404 1 129 8.90e-25 110
MS.gene42837.t1 MTR_3g064050 41.026 117 60 3 661 769 459 574 6.52e-18 88.6
MS.gene42837.t1 MTR_5g074840 35.057 174 82 3 147 320 6 148 1.21e-19 87.0
MS.gene42837.t1 MTR_5g032260 34.921 126 76 3 273 397 34 154 6.82e-15 78.2
MS.gene42837.t1 MTR_1g058350 30.247 162 107 3 167 322 75 236 4.33e-11 65.5
MS.gene42837.t1 MTR_7g117455 36.111 108 68 1 166 273 116 222 4.85e-11 66.2
MS.gene42837.t1 MTR_8g023990 36.697 109 67 2 154 262 158 264 8.77e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42837.t1 AT5G60450 58.409 767 275 12 50 809 35 764 0.0 827
MS.gene42837.t1 AT5G60450 58.453 763 273 12 54 809 63 788 0.0 825
MS.gene42837.t1 AT5G62000 36.501 863 440 21 14 806 29 853 8.97e-171 515
MS.gene42837.t1 AT5G62000 36.501 863 440 21 14 806 29 853 8.97e-171 515
MS.gene42837.t1 AT5G62000 36.501 863 440 21 14 806 29 853 8.97e-171 515
MS.gene42837.t1 AT5G62000 36.501 863 440 21 14 806 29 853 8.97e-171 515
MS.gene42837.t1 AT5G62000 37.260 832 419 20 14 775 29 827 1.60e-170 514
MS.gene42837.t1 AT2G33860 49.896 481 192 10 55 529 53 490 1.90e-147 446
MS.gene42837.t1 AT3G61830 47.222 396 186 8 43 430 12 392 2.03e-117 368
MS.gene42837.t1 AT3G61830 48.039 102 52 1 672 773 480 580 3.26e-23 105
MS.gene42837.t1 AT1G59750 49.727 366 169 5 56 418 22 375 3.36e-117 369
MS.gene42837.t1 AT1G59750 56.122 98 43 0 673 770 529 626 4.11e-28 121
MS.gene42837.t1 AT1G59750 49.727 366 169 5 56 418 22 375 3.78e-117 369
MS.gene42837.t1 AT1G59750 55.000 100 45 0 671 770 529 628 4.14e-28 121
MS.gene42837.t1 AT1G59750 49.727 366 169 5 56 418 22 375 5.13e-117 369
MS.gene42837.t1 AT1G59750 56.122 98 43 0 673 770 534 631 4.24e-28 121
MS.gene42837.t1 AT1G59750 49.727 366 169 5 56 418 22 375 5.13e-117 369
MS.gene42837.t1 AT1G59750 56.122 98 43 0 673 770 534 631 4.24e-28 121
MS.gene42837.t1 AT2G33860 50.413 363 150 5 167 529 1 333 8.63e-113 351
MS.gene42837.t1 AT2G46530 47.425 369 175 8 54 418 19 372 1.00e-110 351
MS.gene42837.t1 AT2G46530 43.200 125 66 2 645 769 458 577 5.14e-24 108
MS.gene42837.t1 AT5G37020 51.374 364 163 6 56 416 22 374 1.12e-110 356
MS.gene42837.t1 AT5G37020 50.725 69 32 2 681 748 705 772 2.79e-15 80.9
MS.gene42837.t1 AT2G46530 47.425 369 175 8 54 418 40 393 2.83e-110 350
MS.gene42837.t1 AT2G46530 43.200 125 66 2 645 769 479 598 6.94e-24 107
MS.gene42837.t1 AT5G37020 51.226 367 159 7 56 416 22 374 4.12e-110 355
MS.gene42837.t1 AT5G37020 46.667 90 46 2 681 769 705 793 2.05e-18 90.9
MS.gene42837.t1 AT1G30330 49.227 388 169 7 56 426 25 401 4.38e-110 358
MS.gene42837.t1 AT1G30330 45.098 102 52 3 671 769 784 884 9.07e-20 95.5
MS.gene42837.t1 AT1G30330 49.227 388 169 7 56 426 25 401 4.38e-110 358
MS.gene42837.t1 AT1G30330 45.098 102 52 3 671 769 784 884 9.07e-20 95.5
MS.gene42837.t1 AT1G30330 49.227 388 169 7 56 426 23 399 6.85e-110 358
MS.gene42837.t1 AT1G30330 45.098 102 52 3 671 769 782 882 9.45e-20 95.1
MS.gene42837.t1 AT4G23980 49.573 351 155 8 54 399 10 343 1.04e-104 336
MS.gene42837.t1 AT4G23980 52.000 100 47 1 673 772 515 613 5.18e-25 111
MS.gene42837.t1 AT4G23980 49.573 351 155 8 54 399 10 343 1.16e-104 336
MS.gene42837.t1 AT4G23980 52.000 100 47 1 673 772 513 611 4.96e-25 111
MS.gene42837.t1 AT3G61830 46.957 345 162 6 92 430 12 341 2.42e-102 327
MS.gene42837.t1 AT3G61830 48.039 102 52 1 672 773 429 529 2.24e-23 105
MS.gene42837.t1 AT1G19850 50.284 352 159 7 56 403 43 382 4.09e-102 336
MS.gene42837.t1 AT1G19850 43.434 99 54 2 673 770 774 871 1.67e-17 88.2
MS.gene42837.t1 AT1G19850 50.284 352 159 7 56 403 54 393 4.33e-102 336
MS.gene42837.t1 AT1G19850 43.434 99 54 2 673 770 785 882 1.72e-17 87.8
MS.gene42837.t1 AT1G19220 51.585 347 152 5 56 399 23 356 5.94e-100 334
MS.gene42837.t1 AT1G19220 45.133 113 56 3 676 783 953 1064 8.05e-22 102
MS.gene42837.t1 AT5G20730 51.009 347 154 5 56 399 24 357 2.69e-97 328
MS.gene42837.t1 AT5G20730 36.970 165 80 6 610 771 984 1127 7.68e-21 99.0
MS.gene42837.t1 AT5G20730 50.862 348 154 6 56 399 24 358 1.43e-95 323
MS.gene42837.t1 AT5G20730 36.970 165 80 6 610 771 985 1128 7.75e-21 99.0
MS.gene42837.t1 AT5G20730 50.862 348 154 6 56 399 24 358 1.56e-95 323
MS.gene42837.t1 AT5G20730 36.970 165 80 6 610 771 985 1128 8.75e-21 99.0
MS.gene42837.t1 AT1G35540 41.892 370 194 6 51 419 22 371 8.07e-90 296
MS.gene42837.t1 AT1G35540 29.885 261 127 7 515 769 387 597 5.80e-23 104
MS.gene42837.t1 AT1G34310 41.240 371 196 7 51 417 22 374 2.72e-87 288
MS.gene42837.t1 AT1G34310 47.706 109 55 2 653 760 482 589 1.03e-21 100
MS.gene42837.t1 AT1G34410 40.323 372 198 8 51 417 22 374 4.13e-86 286
MS.gene42837.t1 AT1G34410 51.579 95 45 1 673 767 503 596 3.38e-22 102
MS.gene42837.t1 AT5G37020 54.651 258 115 2 160 416 23 279 1.42e-85 287
MS.gene42837.t1 AT5G37020 46.667 90 46 2 681 769 610 698 1.56e-18 90.9
MS.gene42837.t1 AT1G35240 41.463 369 195 7 51 418 22 370 1.97e-85 283
MS.gene42837.t1 AT1G35240 50.526 95 46 1 673 767 489 582 8.95e-22 100
MS.gene42837.t1 AT1G34170 40.214 373 199 8 54 423 23 374 3.13e-85 280
MS.gene42837.t1 AT1G35520 41.463 369 195 7 51 418 22 370 3.78e-84 280
MS.gene42837.t1 AT1G35520 44.954 109 58 2 653 760 482 589 1.98e-20 96.7
MS.gene42837.t1 AT1G34390 41.667 384 198 10 51 430 22 383 1.24e-82 276
MS.gene42837.t1 AT1G34390 45.455 110 58 2 653 761 480 588 8.37e-20 94.7
MS.gene42837.t1 AT2G46530 48.659 261 128 4 160 418 29 285 2.15e-81 270
MS.gene42837.t1 AT2G46530 43.200 125 66 2 645 769 371 490 2.74e-24 108
MS.gene42837.t1 AT2G28350 38.795 415 199 7 56 428 10 411 2.88e-80 271
MS.gene42837.t1 AT2G28350 38.795 415 199 7 56 428 10 411 4.68e-80 272
MS.gene42837.t1 AT4G30080 38.776 392 188 8 56 410 19 395 4.70e-78 266
MS.gene42837.t1 AT1G34170 38.070 373 181 8 54 423 23 348 7.89e-74 249
MS.gene42837.t1 AT1G34170 38.070 373 181 8 54 423 23 348 6.29e-73 248
MS.gene42837.t1 AT1G34170 39.623 106 56 2 673 771 418 522 3.85e-17 86.3
MS.gene42837.t1 AT1G77850 29.461 482 278 10 57 502 20 475 6.02e-55 200
MS.gene42837.t1 AT1G77850 29.461 482 278 10 57 502 20 475 7.12e-55 199
MS.gene42837.t1 AT1G43950 44.037 218 104 5 51 267 22 222 6.34e-49 172
MS.gene42837.t1 AT4G01500 38.043 92 54 1 166 257 34 122 8.98e-12 67.8
MS.gene42837.t1 AT2G46870 32.353 170 93 6 143 309 10 160 9.87e-12 67.4
MS.gene42837.t1 AT1G01030 36.735 98 61 1 160 257 48 144 1.28e-11 67.4
MS.gene42837.t1 AT1G01030 36.735 98 61 1 160 257 48 144 1.61e-11 67.4
MS.gene42837.t1 AT1G13260 34.711 121 75 2 149 265 167 287 3.49e-11 66.2

Find 187 sgRNAs with CRISPR-Local

Find 302 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTATAGCTGACCTTCTTTC+TGG 0.139715 2.3:-7963806 None:intergenic
GTAAATCCTTGTAGACTATT+TGG 0.158429 2.3:+7965082 MS.gene42837:CDS
AACCTCATCATTCTCCTTAT+TGG 0.160497 2.3:-7962204 None:intergenic
CTTCTTCTTGTGTATATATA+TGG 0.165929 2.3:-7965902 None:intergenic
AGCCAAAAGAATCTTGTTTC+TGG 0.202166 2.3:+7963272 MS.gene42837:CDS
AACATTCTCTAGTTGGAAAT+TGG 0.212031 2.3:-7964897 None:intergenic
AGAAATGAAGTTGGAATATC+AGG 0.255023 2.3:+7964956 MS.gene42837:CDS
TCATTGGAAATTCCAACTTA+TGG 0.267049 2.3:+7962016 MS.gene42837:CDS
CTTCATCTTATCTTGAACTA+TGG 0.268353 2.3:+7961888 MS.gene42837:CDS
AGCTGGAGACAGTGGGTTTA+TGG 0.268758 2.3:+7964412 MS.gene42837:intron
ACTACAACATTCCCTTTCTT+TGG 0.271823 2.3:-7961941 None:intergenic
TTCTTTGGAAGTGATGTTAA+AGG 0.285859 2.3:-7961926 None:intergenic
CCTGCAGCTTCTGCTTGTTT+CGG 0.298110 2.3:-7964988 None:intergenic
TTTGACTTGGGCCATTTATA+GGG 0.298149 2.3:-7963934 None:intergenic
CCCCAGAAACAAGATTCTTT+TGG 0.320379 2.3:-7963274 None:intergenic
AAACTTAACTTTCACTCATT+AGG 0.322689 2.3:+7964788 MS.gene42837:CDS
AGTGAACTAGAGAGACTATT+TGG 0.331029 2.3:+7965343 MS.gene42837:CDS
GTGATTTGGATCCCTATAAA+TGG 0.335220 2.3:+7963923 MS.gene42837:CDS
TTTCCATTAACAGGCCAATA+AGG 0.336836 2.3:+7962190 MS.gene42837:intron
GAAGTGGAGAAGATGACAAT+TGG 0.348700 2.3:+7965921 MS.gene42837:CDS
CGGAAACGAACCGGTTTCCT+AGG 0.350274 2.3:+7964645 MS.gene42837:CDS
TAGTTGGAAATTGGTTGGTT+TGG 0.350673 2.3:-7964888 None:intergenic
TGGTTACCAACAATTGATTC+AGG 0.358579 2.3:-7963489 None:intergenic
TTCACCTACCTCGATAAATA+TGG 0.367329 2.3:-7963125 None:intergenic
CTGCAGTGAGTTCTGTGTTA+TGG 0.372350 2.3:+7965869 MS.gene42837:intron
ATTCAAAATGAAATTTGAAA+TGG 0.374517 2.3:+7963775 MS.gene42837:CDS
TTGATCTAAACCTTAACTCT+TGG 0.379579 2.3:+7964717 MS.gene42837:CDS
CCACCTGCTTCTAAACCTTC+AGG 0.382333 2.3:-7962671 None:intergenic
ATAAATGGCCCAAGTCAAAA+TGG 0.382489 2.3:+7963938 MS.gene42837:CDS
GCCAAAAGAATCTTGTTTCT+GGG 0.385570 2.3:+7963273 MS.gene42837:CDS
GGGACGCAGTGCTCTTTCTA+AGG 0.386238 2.3:+7963294 MS.gene42837:CDS
TGATCTAAACCTTAACTCTT+GGG 0.391011 2.3:+7964718 MS.gene42837:CDS
TAAATGAAACATTCTCTAGT+TGG 0.401148 2.3:-7964904 None:intergenic
ATGTGAGAAGCTAACTTTGT+AGG 0.405019 2.3:-7962713 None:intergenic
TGACAGTGAAAATGACATTA+TGG 0.405346 2.3:+7965417 MS.gene42837:CDS
TCAGTTAGCAGGGATGTGTT+TGG 0.410443 2.3:+7962637 MS.gene42837:intron
GGTTTAGAAGCAGGTGGAGA+GGG 0.411642 2.3:+7962677 MS.gene42837:CDS
ATTTCTGCTGCTGCTTCTCT+AGG 0.415866 2.3:+7965016 MS.gene42837:CDS
TTGGTAAGGCACAACGAAAT+CGG 0.417321 2.3:-7963708 None:intergenic
CATACTAATCTTGCATCAAA+TGG 0.420961 2.3:+7964560 MS.gene42837:CDS
TAATGAGTGAAAGTTAAGTT+TGG 0.421167 2.3:-7964786 None:intergenic
GATTCAGGAAGACCGTTTCT+CGG 0.422054 2.3:-7963474 None:intergenic
CACAAACAAAGGAGCTTAGT+TGG 0.424467 2.3:+7965274 MS.gene42837:CDS
TTAACATCACTTCCAAAGAA+AGG 0.425871 2.3:+7961929 MS.gene42837:CDS
TGATGATAACCAGAGTTGTT+TGG 0.426706 2.3:+7965953 MS.gene42837:CDS
TTGTGTTGCATTCAGTTAGC+AGG 0.431661 2.3:+7962626 MS.gene42837:intron
GTCAAAATGGAGATGCTTGA+TGG 0.432058 2.3:+7963951 MS.gene42837:CDS
AAAATGACATTATGGTTGTT+GGG 0.432406 2.3:+7965425 MS.gene42837:CDS
AGGATTCTCCATCCTTTGTC+AGG 0.432653 2.3:-7965388 None:intergenic
AAGTGGAGAAGATGACAATT+GGG 0.436343 2.3:+7965922 MS.gene42837:CDS
GAACTATGGCATTCTTGTGC+TGG 0.437430 2.3:+7961902 MS.gene42837:CDS
AATACTCCTTCAGCTCAGAT+AGG 0.438938 2.3:+7964926 MS.gene42837:CDS
TTCTAGTTATGCAGACTTCA+CGG 0.440375 2.3:+7964625 MS.gene42837:CDS
CAGACTTCACGGAAACGAAC+CGG 0.444346 2.3:+7964636 MS.gene42837:CDS
ACTACTGTTGGAGAAGAATC+TGG 0.448069 2.3:-7966026 None:intergenic
TTAGATCAACCTTTCCTGCC+AGG 0.450136 2.3:-7964703 None:intergenic
AGTGACTGGAATGAGTGATT+TGG 0.450736 2.3:+7963909 MS.gene42837:CDS
TTCTTGACCTTGCAAGACCT+TGG 0.450899 2.3:-7964459 None:intergenic
TCGACAAGATTGAATGTTCA+AGG 0.452440 2.3:-7964251 None:intergenic
ATCAAGATAGAGTCTCTCCT+TGG 0.455503 2.3:+7964200 MS.gene42837:CDS
GGTCTTCCTGAATCAATTGT+TGG 0.457519 2.3:+7963483 MS.gene42837:CDS
TTGGATTCATACCAGTGATA+AGG 0.459048 2.3:-7964321 None:intergenic
GCCTCTGATACCAGCACTCA+TGG 0.459057 2.3:+7962755 MS.gene42837:CDS
GTGAAGTCTGCATAACTAGA+AGG 0.460590 2.3:-7964623 None:intergenic
AAAAGTATGCTAAAAGCATC+AGG 0.463277 2.3:+7963729 MS.gene42837:CDS
TAAGTTTGGTTGCATTATGC+AGG 0.464035 2.3:-7964772 None:intergenic
GAAGCAGGTGGAGAGGGAGA+TGG 0.465289 2.3:+7962683 MS.gene42837:CDS
ACAACCCTACAAAAGATTTG+TGG 0.468787 2.3:-7962046 None:intergenic
GGTGGTTTCCGCCGCCGATA+AGG 0.472069 2.3:-7965110 None:intergenic
TAACATCACTTCCAAAGAAA+GGG 0.474815 2.3:+7961930 MS.gene42837:CDS
GTAGTGAGCAGATGCCTCCT+TGG 0.475837 2.3:-7963230 None:intergenic
TTCTCTAGTTGGAAATTGGT+TGG 0.476906 2.3:-7964893 None:intergenic
ACTTTGTGTATATCACCATA+TGG 0.477775 2.3:-7964839 None:intergenic
GAAAATGACATTATGGTTGT+TGG 0.484036 2.3:+7965424 MS.gene42837:CDS
CTTGCAAGACCCTAGGAAAC+CGG 0.485163 2.3:-7964655 None:intergenic
TTTGAAGCCTCCACAATCAA+TGG 0.488117 2.3:-7965984 None:intergenic
TCCTAGTTTCCTTTCTTCAG+TGG 0.491250 2.3:+7963521 MS.gene42837:CDS
TTTAGTAAAACTTACTGCCA+TGG 0.494050 2.3:-7965454 None:intergenic
TACTTTGCTTCCACAGGCAG+AGG 0.504284 2.3:+7962238 MS.gene42837:CDS
AGGAGGCATCTGCTCACTAC+TGG 0.505121 2.3:+7963233 MS.gene42837:CDS
CATACCAGTGATAAGGTGAC+TGG 0.506398 2.3:-7964314 None:intergenic
GGCATCTGCTCACTACTGGC+TGG 0.509364 2.3:+7963237 MS.gene42837:CDS
AACTAGATTCTAACTACTGT+TGG 0.511297 2.3:-7966038 None:intergenic
TATATCACCATATGGAAAAG+AGG 0.512064 2.3:-7964831 None:intergenic
ATCTTGTCCCTATGGTCAGT+GGG 0.513478 2.3:-7963754 None:intergenic
TGTGGTTGAAGACCATAAGT+TGG 0.513554 2.3:-7962028 None:intergenic
GAGCCTGAAGGTTTAGAAGC+AGG 0.515631 2.3:+7962668 MS.gene42837:CDS
GTGATATTACACAGGTCCGA+TGG 0.515735 2.3:+7964155 MS.gene42837:intron
ATTCTTCTTAACTTGTGTTG+TGG 0.515801 2.3:-7961759 None:intergenic
ATAATTTGTGTAACTAACAT+TGG 0.517422 2.3:-7964747 None:intergenic
AATCTTGTCCCTATGGTCAG+TGG 0.518063 2.3:-7963755 None:intergenic
ATTGAGCAGCTACAATGATC+TGG 0.518918 2.3:+7965318 MS.gene42837:CDS
TGAAAACGGAGAGTTAAGAT+TGG 0.519467 2.3:+7963431 MS.gene42837:CDS
AGAGCTGCTCGACCGAGAAA+CGG 0.520377 2.3:+7963462 MS.gene42837:CDS
TAAGAGATCCTGACAAAGGA+TGG 0.521003 2.3:+7965380 MS.gene42837:CDS
CTTCTCTAGGTGCAAACTTG+AGG 0.522379 2.3:+7965029 MS.gene42837:CDS
ATTGAGATCCCTGGCAGGAA+AGG 0.523346 2.3:+7964694 MS.gene42837:CDS
TCTTGACCTTGCAAGACCCT+AGG 0.523482 2.3:-7964662 None:intergenic
GGTGCATTGAGAAATGAAGT+TGG 0.523787 2.3:+7964947 MS.gene42837:CDS
TATATATACACAAGAAGAAG+TGG 0.530321 2.3:+7965905 MS.gene42837:CDS
TCTCTATGTAGGGGTGAAAA+CGG 0.532577 2.3:+7963417 MS.gene42837:intron
TCAAGATAGAGTCTCTCCTT+GGG 0.533378 2.3:+7964201 MS.gene42837:CDS
TTCATCTTCTAGTTCCACTT+CGG 0.534499 2.3:+7961856 MS.gene42837:CDS
TCAGGAACCCACTGACCATA+GGG 0.535798 2.3:+7963747 MS.gene42837:CDS
TAGCATTAGCCACTGAAGAA+AGG 0.540509 2.3:-7963530 None:intergenic
CCGAAACAAGCAGAAGCTGC+AGG 0.542656 2.3:+7964988 MS.gene42837:CDS
ACAGGTTACTTTGCTTCCAC+AGG 0.543725 2.3:+7962232 MS.gene42837:CDS
TAGATCAACCTTTCCTGCCA+GGG 0.544208 2.3:-7964702 None:intergenic
TGTAGTAGCGGTATAGTGAC+TGG 0.545183 2.3:+7963895 MS.gene42837:CDS
TATGGTGATATACACAAAGT+TGG 0.548146 2.3:+7964842 MS.gene42837:CDS
GAAAACGGAGAGTTAAGATT+GGG 0.548310 2.3:+7963432 MS.gene42837:CDS
TGGATGAATCTCCAGAAAGA+AGG 0.548781 2.3:+7963795 MS.gene42837:CDS
TTTCCTGCCAGGGATCTCAA+TGG 0.549270 2.3:-7964692 None:intergenic
GAGAGACTATTTGGCATGGA+AGG 0.550692 2.3:+7965352 MS.gene42837:CDS
GCTCAATCTTGAGAGATCAA+TGG 0.551608 2.3:-7965302 None:intergenic
TGAAGAAACAAGAGCCGAAG+TGG 0.552863 2.3:-7961870 None:intergenic
AATATATCCATTGAGATCCC+TGG 0.553252 2.3:+7964685 MS.gene42837:CDS
GGAACATACACCATTGATTG+TGG 0.553625 2.3:+7965974 MS.gene42837:CDS
AGGCTGAAGAAACTGCGGAC+GGG 0.554562 2.3:+7964274 MS.gene42837:CDS
TACACAGGTCCGATGGGATG+AGG 0.555224 2.3:+7964162 MS.gene42837:intron
GGAAACTAGGAGAACAACTC+TGG 0.556326 2.3:-7963509 None:intergenic
TGAACATTCAATCTTGTCGA+AGG 0.558866 2.3:+7964254 MS.gene42837:CDS
AGGCTGAACCCTCGTAAACT+CGG 0.559216 2.3:-7964603 None:intergenic
AGAAAACCCTCCATGAGTGC+TGG 0.560225 2.3:-7962765 None:intergenic
AAGAAGAATATATGTTGCAA+TGG 0.561906 2.3:+7961773 MS.gene42837:CDS
TGTGTTGCATTCAGTTAGCA+GGG 0.565461 2.3:+7962627 MS.gene42837:intron
GAAAATCCAAATAGTCTACA+AGG 0.566058 2.3:-7965088 None:intergenic
GCTTCAAAGTCTTCCTCAGT+GGG 0.567657 2.3:+7965999 MS.gene42837:CDS
CCAAAAGAATCTTGTTTCTG+GGG 0.569533 2.3:+7963274 MS.gene42837:CDS
TGATATTACACAGGTCCGAT+GGG 0.571325 2.3:+7964156 MS.gene42837:intron
CCGATGGGATGAGGATATTG+AGG 0.572780 2.3:+7964171 MS.gene42837:CDS
GCCACTGAAGAAAGGAAACT+AGG 0.575196 2.3:-7963522 None:intergenic
CGACAAGATTGAATGTTCAA+GGG 0.577787 2.3:-7964250 None:intergenic
GTGTATGTTCCAAACAACTC+TGG 0.578457 2.3:-7965962 None:intergenic
TGGTTGTTGGGGATGATCCA+TGG 0.581281 2.3:+7965437 MS.gene42837:CDS
GAATGAAGGTTCACAAACAA+AGG 0.584254 2.3:+7965263 MS.gene42837:intron
TCACCCAGTCACCTTATCAC+TGG 0.584443 2.3:+7964310 MS.gene42837:CDS
ATCAGGAACCCACTGACCAT+AGG 0.589785 2.3:+7963746 MS.gene42837:CDS
TATCCATTGAGATCCCTGGC+AGG 0.592828 2.3:+7964689 MS.gene42837:CDS
TTCATCGCAGCTGGAGACAG+TGG 0.594260 2.3:+7964404 MS.gene42837:intron
AGGTTTAGAAGCAGGTGGAG+AGG 0.594537 2.3:+7962676 MS.gene42837:CDS
ATTTCCACTCCACACCATGC+AGG 0.596067 2.3:-7963098 None:intergenic
TCATCGCAGCTGGAGACAGT+GGG 0.597361 2.3:+7964405 MS.gene42837:intron
AATGCACCTATCTGAGCTGA+AGG 0.597701 2.3:-7964932 None:intergenic
CGGTTTCCTAGGGTCTTGCA+AGG 0.598452 2.3:+7964656 MS.gene42837:CDS
AATCTTTGTCAGGTCAGCCA+AGG 0.599067 2.3:+7963213 MS.gene42837:intron
AAGATTGAATGTTCAAGGGA+GGG 0.602810 2.3:-7964246 None:intergenic
TCCATGAGTGCTGGTATCAG+AGG 0.602998 2.3:-7962756 None:intergenic
TTACTTCTTCCGAGTTTACG+AGG 0.603395 2.3:+7964594 MS.gene42837:CDS
GATATACACAAAGTTGGTCA+AGG 0.608483 2.3:+7964848 MS.gene42837:CDS
GATCTAAACCTTAACTCTTG+GGG 0.609198 2.3:+7964719 MS.gene42837:CDS
AAATGACATTATGGTTGTTG+GGG 0.611574 2.3:+7965426 MS.gene42837:CDS
TTTGCAACAAGCTCTTGAGA+GGG 0.613596 2.3:-7963072 None:intergenic
GGCTTCAAAGTCTTCCTCAG+TGG 0.617874 2.3:+7965998 MS.gene42837:CDS
GGAAACGAACCGGTTTCCTA+GGG 0.618178 2.3:+7964646 MS.gene42837:CDS
AGATCGACCAAGGTCTTGCA+AGG 0.618905 2.3:+7964452 MS.gene42837:CDS
TGTCATACTCATACCAAAGG+AGG 0.620459 2.3:-7962818 None:intergenic
CTGATACCAGCACTCATGGA+GGG 0.625106 2.3:+7962759 MS.gene42837:CDS
CCTCAATATCCTCATCCCAT+CGG 0.625293 2.3:-7964171 None:intergenic
ATAAAACCTACCTCTGCCTG+TGG 0.625761 2.3:-7962248 None:intergenic
CTTTGTCAGGTCAGCCAAGG+AGG 0.625815 2.3:+7963216 MS.gene42837:intron
ACTTGTTCCAAATGACCTTG+TGG 0.628653 2.3:-7961971 None:intergenic
TTGGATGACAAAGAGCCTGA+AGG 0.629150 2.3:+7962656 MS.gene42837:CDS
CAAGATTGAATGTTCAAGGG+AGG 0.630768 2.3:-7964247 None:intergenic
ACTAGAGAGACTATTTGGCA+TGG 0.631155 2.3:+7965348 MS.gene42837:CDS
TACTTCTTCCGAGTTTACGA+GGG 0.633533 2.3:+7964595 MS.gene42837:CDS
CCTGAAGGTTTAGAAGCAGG+TGG 0.635598 2.3:+7962671 MS.gene42837:CDS
AAGGGAGGGAGAGAAGTAGA+CGG 0.635894 2.3:-7964232 None:intergenic
GAATGATGAGGTTTACACAC+AGG 0.638216 2.3:+7962214 MS.gene42837:CDS
TGCAAAAGACCTGCATGGTG+TGG 0.639765 2.3:+7963089 MS.gene42837:CDS
AAGACCTGCATGGTGTGGAG+TGG 0.642527 2.3:+7963094 MS.gene42837:CDS
ACATACACCATTGATTGTGG+AGG 0.643124 2.3:+7965977 MS.gene42837:CDS
ATGTCTTGCAGGTGTAGTAG+CGG 0.648254 2.3:+7963883 MS.gene42837:intron
CTTCTAAGAGATCCTGACAA+AGG 0.649192 2.3:+7965376 MS.gene42837:CDS
GAACTAGAAGATGAACATGT+TGG 0.654160 2.3:-7961848 None:intergenic
AAGGCTGAAGAAACTGCGGA+CGG 0.656866 2.3:+7964273 MS.gene42837:CDS
TGCTAAAAGAAGTTGCACGA+AGG 0.662737 2.3:+7965153 MS.gene42837:CDS
AAATTTCGCCATATTTATCG+AGG 0.663380 2.3:+7963117 MS.gene42837:CDS
GTAGACGGATCGATCTCCCA+AGG 0.663808 2.3:-7964217 None:intergenic
GGCCAATAAGGAGAATGATG+AGG 0.666485 2.3:+7962202 MS.gene42837:intron
ATACCAGTGATAAGGTGACT+GGG 0.667650 2.3:-7964313 None:intergenic
GTCGAAGGCTGAAGAAACTG+CGG 0.672621 2.3:+7964269 MS.gene42837:CDS
CAATCTTCAGCAGCTCGACG+AGG 0.685556 2.3:-7962791 None:intergenic
TCTGATACCAGCACTCATGG+AGG 0.685802 2.3:+7962758 MS.gene42837:CDS
TGAGTCTATAAGATCGACCA+AGG 0.694503 2.3:+7964442 MS.gene42837:CDS
CTTGTTGCAAAAGACCTGCA+TGG 0.711702 2.3:+7963084 MS.gene42837:CDS
AGAATCTGGCTGTCCCACTG+AGG 0.716343 2.3:-7966012 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATATTTATACTGATTTAA+TGG - chr2.3:7965529-7965548 None:intergenic 10.0%
!! AAACATATTAAATATACATG+TGG - chr2.3:7963659-7963678 None:intergenic 15.0%
!! AACATATTAAATATACATGT+GGG - chr2.3:7963658-7963677 None:intergenic 15.0%
!! ATTCAAAATGAAATTTGAAA+TGG + chr2.3:7963775-7963794 MS.gene42837:CDS 15.0%
!! TATTAATGTAATGTTTAGAA+AGG - chr2.3:7964091-7964110 None:intergenic 15.0%
!! TGATATTATATTTCAAATGT+CGG + chr2.3:7965753-7965772 MS.gene42837:intron 15.0%
!!! ATTTGAAATATAATATCACA+AGG - chr2.3:7965751-7965770 None:intergenic 15.0%
!!! GTTTTATGGTTTAATATATT+TGG + chr2.3:7962264-7962283 MS.gene42837:intron 15.0%
!! ACCATATGATATTTATTCAA+TGG - chr2.3:7965674-7965693 None:intergenic 20.0%
!! ACCATTGAATAAATATCATA+TGG + chr2.3:7965670-7965689 MS.gene42837:intron 20.0%
!! ATGTAATATACAATGAATGA+AGG + chr2.3:7965249-7965268 MS.gene42837:intron 20.0%
!! ATTCATATCACAATATAACT+CGG - chr2.3:7965195-7965214 None:intergenic 20.0%
!! ATTTCAAAATATCGATCTAA+TGG + chr2.3:7965545-7965564 MS.gene42837:intron 20.0%
!! GATATTATATTTCAAATGTC+GGG + chr2.3:7965754-7965773 MS.gene42837:intron 20.0%
!!! AGTTTTATGTCACTATATTA+TGG + chr2.3:7964488-7964507 MS.gene42837:CDS 20.0%
!!! ATAATTTGTGTAACTAACAT+TGG - chr2.3:7964750-7964769 None:intergenic 20.0%
!!! ATTTCTTTTTTGATGCATTT+TGG + chr2.3:7962291-7962310 MS.gene42837:intron 20.0%
!!! GTATATTTTTTTCCATTAAC+AGG + chr2.3:7962181-7962200 MS.gene42837:intron 20.0%
!!! GTTTGGTTTTCATTAAAAAT+TGG + chr2.3:7962313-7962332 MS.gene42837:intron 20.0%
!!! TTCTTTTGTCTATTTGTAAA+TGG + chr2.3:7965482-7965501 MS.gene42837:intron 20.0%
! AAAATGACATTATGGTTGTT+GGG + chr2.3:7965425-7965444 MS.gene42837:CDS 25.0%
! AAACTTAACTTTCACTCATT+AGG + chr2.3:7964788-7964807 MS.gene42837:CDS 25.0%
! AAGAAGAATATATGTTGCAA+TGG + chr2.3:7961773-7961792 MS.gene42837:CDS 25.0%
! ATAGGATAGAATGATTCAAT+AGG - chr2.3:7965794-7965813 None:intergenic 25.0%
! ATGTTGTAGAATACAGATAA+TGG - chr2.3:7963851-7963870 None:intergenic 25.0%
! ATTGTATATTACATATGCGT+TGG - chr2.3:7965243-7965262 None:intergenic 25.0%
! ATTTAGTTATCTCGTACATT+TGG - chr2.3:7964343-7964362 None:intergenic 25.0%
! CTATCCTATGTAACATATTA+TGG + chr2.3:7965805-7965824 MS.gene42837:intron 25.0%
! CTTCTTCTTGTGTATATATA+TGG - chr2.3:7965905-7965924 None:intergenic 25.0%
! TAAATGAAACATTCTCTAGT+TGG - chr2.3:7964907-7964926 None:intergenic 25.0%
! TAATGAGTGAAAGTTAAGTT+TGG - chr2.3:7964789-7964808 None:intergenic 25.0%
! TATATATACACAAGAAGAAG+TGG + chr2.3:7965905-7965924 MS.gene42837:CDS 25.0%
! TCATCCATAATATGTTACAT+AGG - chr2.3:7965812-7965831 None:intergenic 25.0%
! TCATGTATAACACTAGTATT+TGG - chr2.3:7962559-7962578 None:intergenic 25.0%
! TGAAACAGAAATATTGTGAT+TGG + chr2.3:7963144-7963163 MS.gene42837:intron 25.0%
! TTACGATCGTATTATACATT+TGG + chr2.3:7964016-7964035 MS.gene42837:intron 25.0%
!! ACTATTTGGATTTTCCTTAT+CGG + chr2.3:7965096-7965115 MS.gene42837:CDS 25.0%
!! CATTAAAAATTGGCAAGTTT+TGG + chr2.3:7962323-7962342 MS.gene42837:intron 25.0%
!!! CTGTTTATTTTCACTTCTTT+AGG + chr2.3:7963032-7963051 MS.gene42837:intron 25.0%
!!! TTTCTTGTTTTGCAAAATGT+TGG + chr2.3:7963615-7963634 MS.gene42837:intron 25.0%
!!! TTTTTTGATGCATTTTGGTT+TGG + chr2.3:7962296-7962315 MS.gene42837:intron 25.0%
AAATGACATTATGGTTGTTG+GGG + chr2.3:7965426-7965445 MS.gene42837:CDS 30.0%
AAATTTCGCCATATTTATCG+AGG + chr2.3:7963117-7963136 MS.gene42837:CDS 30.0%
AACATTCTCTAGTTGGAAAT+TGG - chr2.3:7964900-7964919 None:intergenic 30.0%
ACAGAAATATTGTGATTGGT+TGG + chr2.3:7963148-7963167 MS.gene42837:intron 30.0%
ACTTTGTGTATATCACCATA+TGG - chr2.3:7964842-7964861 None:intergenic 30.0%
AGAAATGAAGTTGGAATATC+AGG + chr2.3:7964956-7964975 MS.gene42837:CDS 30.0%
AGATTCATAGTTACCTTATG+AGG - chr2.3:7962607-7962626 None:intergenic 30.0%
CATACTAATCTTGCATCAAA+TGG + chr2.3:7964560-7964579 MS.gene42837:CDS 30.0%
CTTCATCTTATCTTGAACTA+TGG + chr2.3:7961888-7961907 MS.gene42837:CDS 30.0%
GAAAATCCAAATAGTCTACA+AGG - chr2.3:7965091-7965110 None:intergenic 30.0%
GAAAATGACATTATGGTTGT+TGG + chr2.3:7965424-7965443 MS.gene42837:CDS 30.0%
GTAAATCCTTGTAGACTATT+TGG + chr2.3:7965082-7965101 MS.gene42837:CDS 30.0%
TAACATCACTTCCAAAGAAA+GGG + chr2.3:7961930-7961949 MS.gene42837:CDS 30.0%
TATATCACCATATGGAAAAG+AGG - chr2.3:7964834-7964853 None:intergenic 30.0%
TATGGTGATATACACAAAGT+TGG + chr2.3:7964842-7964861 MS.gene42837:CDS 30.0%
TCATTGGAAATTCCAACTTA+TGG + chr2.3:7962016-7962035 MS.gene42837:CDS 30.0%
TGACAGTGAAAATGACATTA+TGG + chr2.3:7965417-7965436 MS.gene42837:CDS 30.0%
TGATACACATCATTGATGAA+TGG + chr2.3:7962421-7962440 MS.gene42837:intron 30.0%
TGATCTAAACCTTAACTCTT+GGG + chr2.3:7964718-7964737 MS.gene42837:CDS 30.0%
TTAACATCACTTCCAAAGAA+AGG + chr2.3:7961929-7961948 MS.gene42837:CDS 30.0%
TTAGGACACAATAAGTTTAG+TGG - chr2.3:7964374-7964393 None:intergenic 30.0%
TTGATCTAAACCTTAACTCT+TGG + chr2.3:7964717-7964736 MS.gene42837:CDS 30.0%
TTGATTAAGCTCTCATCATT+TGG - chr2.3:7964123-7964142 None:intergenic 30.0%
TTTAGTAAAACTTACTGCCA+TGG - chr2.3:7965457-7965476 None:intergenic 30.0%
! AATGGTTTTCTAACTTACAC+TGG - chr2.3:7965656-7965675 None:intergenic 30.0%
! ATATCATTTTCATGTCTTGC+AGG + chr2.3:7963872-7963891 MS.gene42837:intron 30.0%
! ATTTTCTGACCTGAAATTGT+TGG + chr2.3:7962985-7963004 MS.gene42837:intron 30.0%
! CAAAATTCCTCTTTTCCATA+TGG + chr2.3:7964824-7964843 MS.gene42837:CDS 30.0%
! CTTTTAGCATACTTTTGGTA+AGG - chr2.3:7963725-7963744 None:intergenic 30.0%
! GCTTATTTGAGTTTATCTAC+TGG + chr2.3:7962861-7962880 MS.gene42837:intron 30.0%
! TCAACCACAAATCTTTTGTA+GGG + chr2.3:7962042-7962061 MS.gene42837:CDS 30.0%
! TGATGCTTTTAGCATACTTT+TGG - chr2.3:7963730-7963749 None:intergenic 30.0%
! TTATTTTCCACAAGGTCATT+TGG + chr2.3:7961964-7961983 MS.gene42837:CDS 30.0%
! TTCAACCACAAATCTTTTGT+AGG + chr2.3:7962041-7962060 MS.gene42837:CDS 30.0%
! TTCTTTGGAAGTGATGTTAA+AGG - chr2.3:7961929-7961948 None:intergenic 30.0%
! TTTGTCTCTCTTTTCTTCAT+TGG + chr2.3:7962000-7962019 MS.gene42837:CDS 30.0%
!! AAAAGTATGCTAAAAGCATC+AGG + chr2.3:7963729-7963748 MS.gene42837:CDS 30.0%
!! AACATGAAACATGCTTTTTG+CGG - chr2.3:7963559-7963578 None:intergenic 30.0%
!! ATTCTTCTTAACTTGTGTTG+TGG - chr2.3:7961762-7961781 None:intergenic 30.0%
!! GTTGTAGTTTATTTTCCACA+AGG + chr2.3:7961956-7961975 MS.gene42837:CDS 30.0%
!!! TTTTTTGAGTTCAGCTATTG+AGG - chr2.3:7962486-7962505 None:intergenic 30.0%
AACCTCATCATTCTCCTTAT+TGG - chr2.3:7962207-7962226 None:intergenic 35.0%
AAGATTGAATGTTCAAGGGA+GGG - chr2.3:7964249-7964268 None:intergenic 35.0%
AAGTGGAGAAGATGACAATT+GGG + chr2.3:7965922-7965941 MS.gene42837:CDS 35.0%
AATATATCCATTGAGATCCC+TGG + chr2.3:7964685-7964704 MS.gene42837:CDS 35.0%
ACAACCCTACAAAAGATTTG+TGG - chr2.3:7962049-7962068 None:intergenic 35.0%
ACCTGACAAAGATTACAACA+TGG - chr2.3:7963207-7963226 None:intergenic 35.0%
ACTACAACATTCCCTTTCTT+TGG - chr2.3:7961944-7961963 None:intergenic 35.0%
AGCTATCTGTGATATTACAC+AGG + chr2.3:7964147-7964166 MS.gene42837:intron 35.0%
AGTGAACTAGAGAGACTATT+TGG + chr2.3:7965343-7965362 MS.gene42837:CDS 35.0%
ATAAATGGCCCAAGTCAAAA+TGG + chr2.3:7963938-7963957 MS.gene42837:CDS 35.0%
ATGTGAGAAGCTAACTTTGT+AGG - chr2.3:7962716-7962735 None:intergenic 35.0%
CGACAAGATTGAATGTTCAA+GGG - chr2.3:7964253-7964272 None:intergenic 35.0%
GAAAACGGAGAGTTAAGATT+GGG + chr2.3:7963432-7963451 MS.gene42837:CDS 35.0%
GAAATTGTTGGAAAGTTCGA+AGG + chr2.3:7962997-7963016 MS.gene42837:intron 35.0%
GAACTAGAAGATGAACATGT+TGG - chr2.3:7961851-7961870 None:intergenic 35.0%
GAATGAAGGTTCACAAACAA+AGG + chr2.3:7965263-7965282 MS.gene42837:intron 35.0%
GATCTAAACCTTAACTCTTG+GGG + chr2.3:7964719-7964738 MS.gene42837:CDS 35.0%
GATTTAATGGCTGAAACAGA+TGG - chr2.3:7965516-7965535 None:intergenic 35.0%
TAAGTTTGGTTGCATTATGC+AGG - chr2.3:7964775-7964794 None:intergenic 35.0%
TACATACTTGTGACACTGTT+TGG + chr2.3:7962886-7962905 MS.gene42837:intron 35.0%
TAGTGTCATACTCATACCAA+AGG - chr2.3:7962824-7962843 None:intergenic 35.0%
TATCTGCTAATCAAGTACCT+TGG - chr2.3:7963591-7963610 None:intergenic 35.0%
TATGACACTATGAGTCTGTT+TGG + chr2.3:7962834-7962853 MS.gene42837:intron 35.0%
TCATAGTTACCTTATGAGGT+AGG - chr2.3:7962603-7962622 None:intergenic 35.0%
TCCAACAGTAGTTAGAATCT+AGG + chr2.3:7966037-7966056 MS.gene42837:CDS 35.0%
TCCATGTTGTAATCTTTGTC+AGG + chr2.3:7963203-7963222 MS.gene42837:intron 35.0%
TCGAACTTTCCAACAATTTC+AGG - chr2.3:7962997-7963016 None:intergenic 35.0%
TCGACAAGATTGAATGTTCA+AGG - chr2.3:7964254-7964273 None:intergenic 35.0%
TGAAAACGGAGAGTTAAGAT+TGG + chr2.3:7963431-7963450 MS.gene42837:CDS 35.0%
TGAACATTCAATCTTGTCGA+AGG + chr2.3:7964254-7964273 MS.gene42837:CDS 35.0%
TGACAAAAATTTCAACGCGA+AGG + chr2.3:7965060-7965079 MS.gene42837:CDS 35.0%
TGATGATAACCAGAGTTGTT+TGG + chr2.3:7965953-7965972 MS.gene42837:CDS 35.0%
TTCAATAGGACAACTCATTC+AGG - chr2.3:7965780-7965799 None:intergenic 35.0%
TTCACCTACCTCGATAAATA+TGG - chr2.3:7963128-7963147 None:intergenic 35.0%
TTCTCTAGTTGGAAATTGGT+TGG - chr2.3:7964896-7964915 None:intergenic 35.0%
TTGGATTCATACCAGTGATA+AGG - chr2.3:7964324-7964343 None:intergenic 35.0%
TTTCCATTAACAGGCCAATA+AGG + chr2.3:7962190-7962209 MS.gene42837:intron 35.0%
! AGAGTTCTGTAGATTTTGTG+AGG - chr2.3:7965134-7965153 None:intergenic 35.0%
! AGCCAAAAGAATCTTGTTTC+TGG + chr2.3:7963272-7963291 MS.gene42837:CDS 35.0%
! ATTTGGATTTTCCTTATCGG+CGG + chr2.3:7965099-7965118 MS.gene42837:CDS 35.0%
! CATTTTGAATCTTGTCCCTA+TGG - chr2.3:7963765-7963784 None:intergenic 35.0%
! GATATACACAAAGTTGGTCA+AGG + chr2.3:7964848-7964867 MS.gene42837:CDS 35.0%
! GCCAAAAGAATCTTGTTTCT+GGG + chr2.3:7963273-7963292 MS.gene42837:CDS 35.0%
! GTGATTTGGATCCCTATAAA+TGG + chr2.3:7963923-7963942 MS.gene42837:CDS 35.0%
! TAGTTGGAAATTGGTTGGTT+TGG - chr2.3:7964891-7964910 None:intergenic 35.0%
! TGAACTGAGAGCTTTTGAAT+TGG + chr2.3:7963330-7963349 MS.gene42837:intron 35.0%
! TGAAGATTGTTTTCCTCCTT+TGG + chr2.3:7962805-7962824 MS.gene42837:CDS 35.0%
! TGGTTACCAACAATTGATTC+AGG - chr2.3:7963492-7963511 None:intergenic 35.0%
! TTCATGTTTTCTACAGTCCA+AGG + chr2.3:7963571-7963590 MS.gene42837:CDS 35.0%
! TTCTAGTTATGCAGACTTCA+CGG + chr2.3:7964625-7964644 MS.gene42837:CDS 35.0%
!! AAGGTGCATCCGTTTTTAAT+TGG - chr2.3:7965596-7965615 None:intergenic 35.0%
!! CCAAAAGAATCTTGTTTCTG+GGG + chr2.3:7963274-7963293 MS.gene42837:CDS 35.0%
!! TCCGTTTTTAATTGGTGTAC+CGG - chr2.3:7965588-7965607 None:intergenic 35.0%
!! TTCATCTTCTAGTTCCACTT+CGG + chr2.3:7961856-7961875 MS.gene42837:CDS 35.0%
!! TTTGACTTGGGCCATTTATA+GGG - chr2.3:7963937-7963956 None:intergenic 35.0%
!!! AAGCATCTCCATTTTGACTT+GGG - chr2.3:7963949-7963968 None:intergenic 35.0%
!!! TTTTGACTTGGGCCATTTAT+AGG - chr2.3:7963938-7963957 None:intergenic 35.0%
AATACTCCTTCAGCTCAGAT+AGG + chr2.3:7964926-7964945 MS.gene42837:CDS 40.0%
ACACTAGTATTTGGATCCCA+AGG - chr2.3:7962550-7962569 None:intergenic 40.0%
ACTACTGTTGGAGAAGAATC+TGG - chr2.3:7966029-7966048 None:intergenic 40.0%
ACTAGAGAGACTATTTGGCA+TGG + chr2.3:7965348-7965367 MS.gene42837:CDS 40.0%
ACTTGTTCCAAATGACCTTG+TGG - chr2.3:7961974-7961993 None:intergenic 40.0%
AGTGACTGGAATGAGTGATT+TGG + chr2.3:7963909-7963928 MS.gene42837:CDS 40.0%
ATACCAGTGATAAGGTGACT+GGG - chr2.3:7964316-7964335 None:intergenic 40.0%
ATAGAGATCCATGAGCAGTA+AGG - chr2.3:7963404-7963423 None:intergenic 40.0%
ATCAAGATAGAGTCTCTCCT+TGG + chr2.3:7964200-7964219 MS.gene42837:CDS 40.0%
ATTGAGCAGCTACAATGATC+TGG + chr2.3:7965318-7965337 MS.gene42837:CDS 40.0%
ATTGTTGGAAAGTTCGAAGG+TGG + chr2.3:7963000-7963019 MS.gene42837:intron 40.0%
CAAGATTGAATGTTCAAGGG+AGG - chr2.3:7964250-7964269 None:intergenic 40.0%
CACAAACAAAGGAGCTTAGT+TGG + chr2.3:7965274-7965293 MS.gene42837:CDS 40.0%
CACTATGAGTCTGTTTGGAT+TGG + chr2.3:7962839-7962858 MS.gene42837:intron 40.0%
CCCGGTACACCAATTAAAAA+CGG + chr2.3:7965584-7965603 MS.gene42837:intron 40.0%
CCTTTGTCGAATTTCTCCTT+GGG + chr2.3:7962531-7962550 MS.gene42837:intron 40.0%
GAAGTGGAGAAGATGACAAT+TGG + chr2.3:7965921-7965940 MS.gene42837:CDS 40.0%
GAATGATGAGGTTTACACAC+AGG + chr2.3:7962214-7962233 MS.gene42837:CDS 40.0%
GCTCAATCTTGAGAGATCAA+TGG - chr2.3:7965305-7965324 None:intergenic 40.0%
GGTCTTCCTGAATCAATTGT+TGG + chr2.3:7963483-7963502 MS.gene42837:CDS 40.0%
GGTGCATTGAGAAATGAAGT+TGG + chr2.3:7964947-7964966 MS.gene42837:CDS 40.0%
GTCAAAATGGAGATGCTTGA+TGG + chr2.3:7963951-7963970 MS.gene42837:CDS 40.0%
GTGAAGTCTGCATAACTAGA+AGG - chr2.3:7964626-7964645 None:intergenic 40.0%
GTGTATGTTCCAAACAACTC+TGG - chr2.3:7965965-7965984 None:intergenic 40.0%
GTTATAGCTGACCTTCTTTC+TGG - chr2.3:7963809-7963828 None:intergenic 40.0%
TAAGAGATCCTGACAAAGGA+TGG + chr2.3:7965380-7965399 MS.gene42837:CDS 40.0%
TACTTCTTCCGAGTTTACGA+GGG + chr2.3:7964595-7964614 MS.gene42837:CDS 40.0%
TAGCATTAGCCACTGAAGAA+AGG - chr2.3:7963533-7963552 None:intergenic 40.0%
TCAAGATAGAGTCTCTCCTT+GGG + chr2.3:7964201-7964220 MS.gene42837:CDS 40.0%
TCCTAGTTTCCTTTCTTCAG+TGG + chr2.3:7963521-7963540 MS.gene42837:CDS 40.0%
TCCTTTGTCGAATTTCTCCT+TGG + chr2.3:7962530-7962549 MS.gene42837:intron 40.0%
TCTCTATGTAGGGGTGAAAA+CGG + chr2.3:7963417-7963436 MS.gene42837:intron 40.0%
TGAGTCTATAAGATCGACCA+AGG + chr2.3:7964442-7964461 MS.gene42837:CDS 40.0%
TGATATTACACAGGTCCGAT+GGG + chr2.3:7964156-7964175 MS.gene42837:intron 40.0%
TGCTAAAAGAAGTTGCACGA+AGG + chr2.3:7965153-7965172 MS.gene42837:CDS 40.0%
TGCTCATGGATCTCTATGTA+GGG + chr2.3:7963407-7963426 MS.gene42837:intron 40.0%
TGGATGAATCTCCAGAAAGA+AGG + chr2.3:7963795-7963814 MS.gene42837:CDS 40.0%
TGTCATACTCATACCAAAGG+AGG - chr2.3:7962821-7962840 None:intergenic 40.0%
TGTGGTTGAAGACCATAAGT+TGG - chr2.3:7962031-7962050 None:intergenic 40.0%
TGTGTTGCATTCAGTTAGCA+GGG + chr2.3:7962627-7962646 MS.gene42837:intron 40.0%
TTACTTCTTCCGAGTTTACG+AGG + chr2.3:7964594-7964613 MS.gene42837:CDS 40.0%
TTCGCCATATTTATCGAGGT+AGG + chr2.3:7963121-7963140 MS.gene42837:intron 40.0%
TTCTTTGCTCCTACCTCATA+AGG + chr2.3:7962591-7962610 MS.gene42837:intron 40.0%
TTGGTAAGGCACAACGAAAT+CGG - chr2.3:7963711-7963730 None:intergenic 40.0%
TTGTGTTGCATTCAGTTAGC+AGG + chr2.3:7962626-7962645 MS.gene42837:intron 40.0%
TTTGCAACAAGCTCTTGAGA+GGG - chr2.3:7963075-7963094 None:intergenic 40.0%
! ACATACACCATTGATTGTGG+AGG + chr2.3:7965977-7965996 MS.gene42837:CDS 40.0%
! ATGCGTTGGCAAATTGTCAA+AGG - chr2.3:7965229-7965248 None:intergenic 40.0%
! CATTTTCACTGTCAGTGTAG+AGG - chr2.3:7965411-7965430 None:intergenic 40.0%
! CCCCAGAAACAAGATTCTTT+TGG - chr2.3:7963277-7963296 None:intergenic 40.0%
! CTTCTAAGAGATCCTGACAA+AGG + chr2.3:7965376-7965395 MS.gene42837:CDS 40.0%
! GGAACATACACCATTGATTG+TGG + chr2.3:7965974-7965993 MS.gene42837:CDS 40.0%
! GTTCTGTAGATTTTGTGAGG+TGG - chr2.3:7965131-7965150 None:intergenic 40.0%
! TCTCCTTATTGGCCTGTTAA+TGG - chr2.3:7962196-7962215 None:intergenic 40.0%
! TTTGAAGCCTCCACAATCAA+TGG - chr2.3:7965987-7966006 None:intergenic 40.0%
! TTTTGCAACAAGCTCTTGAG+AGG - chr2.3:7963076-7963095 None:intergenic 40.0%
!! CCGTTTTTAATTGGTGTACC+GGG - chr2.3:7965587-7965606 None:intergenic 40.0%
!! TGGTTTTACCCCAAGAGTTA+AGG - chr2.3:7964730-7964749 None:intergenic 40.0%
!!! CAAGCATCTCCATTTTGACT+TGG - chr2.3:7963950-7963969 None:intergenic 40.0%
AATCTTGTCCCTATGGTCAG+TGG - chr2.3:7963758-7963777 None:intergenic 45.0%
AATCTTTGTCAGGTCAGCCA+AGG + chr2.3:7963213-7963232 MS.gene42837:intron 45.0%
AATGCACCTATCTGAGCTGA+AGG - chr2.3:7964935-7964954 None:intergenic 45.0%
ACAGCAGACAATCGAAGTCA+AGG - chr2.3:7965615-7965634 None:intergenic 45.0%
AGAACTCACTGCAGGCAAAA+GGG - chr2.3:7965863-7965882 None:intergenic 45.0%
AGGATTCTCCATCCTTTGTC+AGG - chr2.3:7965391-7965410 None:intergenic 45.0%
ATAAAACCTACCTCTGCCTG+TGG - chr2.3:7962251-7962270 None:intergenic 45.0%
ATCTTGTCCCTATGGTCAGT+GGG - chr2.3:7963757-7963776 None:intergenic 45.0%
ATGTCTTGCAGGTGTAGTAG+CGG + chr2.3:7963883-7963902 MS.gene42837:intron 45.0%
CATAACACAGAACTCACTGC+AGG - chr2.3:7965871-7965890 None:intergenic 45.0%
CATACCAGTGATAAGGTGAC+TGG - chr2.3:7964317-7964336 None:intergenic 45.0%
CCCAAGGAGAAATTCGACAA+AGG - chr2.3:7962534-7962553 None:intergenic 45.0%
CCTCAATATCCTCATCCCAT+CGG - chr2.3:7964174-7964193 None:intergenic 45.0%
CTGCAGTGAGTTCTGTGTTA+TGG + chr2.3:7965869-7965888 MS.gene42837:intron 45.0%
CTGCTCATGGATCTCTATGT+AGG + chr2.3:7963406-7963425 MS.gene42837:intron 45.0%
CTTCTCTAGGTGCAAACTTG+AGG + chr2.3:7965029-7965048 MS.gene42837:CDS 45.0%
CTTGTTGCAAAAGACCTGCA+TGG + chr2.3:7963084-7963103 MS.gene42837:CDS 45.0%
GAACTATGGCATTCTTGTGC+TGG + chr2.3:7961902-7961921 MS.gene42837:CDS 45.0%
GAGAGACTATTTGGCATGGA+AGG + chr2.3:7965352-7965371 MS.gene42837:CDS 45.0%
GATTCAGGAAGACCGTTTCT+CGG - chr2.3:7963477-7963496 None:intergenic 45.0%
GCCACTGAAGAAAGGAAACT+AGG - chr2.3:7963525-7963544 None:intergenic 45.0%
GCTCATGGATCTCTATGTAG+GGG + chr2.3:7963408-7963427 MS.gene42837:intron 45.0%
GCTTCAAAGTCTTCCTCAGT+GGG + chr2.3:7965999-7966018 MS.gene42837:CDS 45.0%
GGAAACTAGGAGAACAACTC+TGG - chr2.3:7963512-7963531 None:intergenic 45.0%
GGCCAATAAGGAGAATGATG+AGG + chr2.3:7962202-7962221 MS.gene42837:intron 45.0%
GGCTATGACTTATGTTGTCC+CGG + chr2.3:7965566-7965585 MS.gene42837:intron 45.0%
GTCGTCGGATCATCATTCAA+TGG + chr2.3:7965707-7965726 MS.gene42837:intron 45.0%
GTGATATTACACAGGTCCGA+TGG + chr2.3:7964155-7964174 MS.gene42837:intron 45.0%
GTTCATCCAGAATGAGTCGT+CGG + chr2.3:7965692-7965711 MS.gene42837:intron 45.0%
TAGATCAACCTTTCCTGCCA+GGG - chr2.3:7964705-7964724 None:intergenic 45.0%
TCAGTTAGCAGGGATGTGTT+TGG + chr2.3:7962637-7962656 MS.gene42837:intron 45.0%
TGAAGAAACAAGAGCCGAAG+TGG - chr2.3:7961873-7961892 None:intergenic 45.0%
TGTAGTAGCGGTATAGTGAC+TGG + chr2.3:7963895-7963914 MS.gene42837:CDS 45.0%
TTAGATCAACCTTTCCTGCC+AGG - chr2.3:7964706-7964725 None:intergenic 45.0%
TTCTTGACCTTGCAAGACCT+TGG - chr2.3:7964462-7964481 None:intergenic 45.0%
TTGGATGACAAAGAGCCTGA+AGG + chr2.3:7962656-7962675 MS.gene42837:CDS 45.0%
! ACAGGCAGAGGTAGGTTTTA+TGG + chr2.3:7962250-7962269 MS.gene42837:intron 45.0%
! ACAGGTTACTTTGCTTCCAC+AGG + chr2.3:7962232-7962251 MS.gene42837:CDS 45.0%
! ATTTCTGCTGCTGCTTCTCT+AGG + chr2.3:7965016-7965035 MS.gene42837:CDS 45.0%
! TAGAAAGGCGTACGCTTCAA+CGG - chr2.3:7964076-7964095 None:intergenic 45.0%
AAGGCTGAAGAAACTGCGGA+CGG + chr2.3:7964273-7964292 MS.gene42837:CDS 50.0%
AAGGGAGGGAGAGAAGTAGA+CGG - chr2.3:7964235-7964254 None:intergenic 50.0%
AGAAAACCCTCCATGAGTGC+TGG - chr2.3:7962768-7962787 None:intergenic 50.0%
AGATCGACCAAGGTCTTGCA+AGG + chr2.3:7964452-7964471 MS.gene42837:CDS 50.0%
AGGCTGAACCCTCGTAAACT+CGG - chr2.3:7964606-7964625 None:intergenic 50.0%
AGGTTTAGAAGCAGGTGGAG+AGG + chr2.3:7962676-7962695 MS.gene42837:CDS 50.0%
ATCAGGAACCCACTGACCAT+AGG + chr2.3:7963746-7963765 MS.gene42837:CDS 50.0%
ATTGAGATCCCTGGCAGGAA+AGG + chr2.3:7964694-7964713 MS.gene42837:CDS 50.0%
ATTTCCACTCCACACCATGC+AGG - chr2.3:7963101-7963120 None:intergenic 50.0%
CAGAACTCACTGCAGGCAAA+AGG - chr2.3:7965864-7965883 None:intergenic 50.0%
CAGACTTCACGGAAACGAAC+CGG + chr2.3:7964636-7964655 MS.gene42837:CDS 50.0%
CCACCTGCTTCTAAACCTTC+AGG - chr2.3:7962674-7962693 None:intergenic 50.0%
CCGATGGGATGAGGATATTG+AGG + chr2.3:7964171-7964190 MS.gene42837:CDS 50.0%
CCTGAAGGTTTAGAAGCAGG+TGG + chr2.3:7962671-7962690 MS.gene42837:CDS 50.0%
CCTGCAGCTTCTGCTTGTTT+CGG - chr2.3:7964991-7965010 None:intergenic 50.0%
CTGATACCAGCACTCATGGA+GGG + chr2.3:7962759-7962778 MS.gene42837:CDS 50.0%
CTTGCAAGACCCTAGGAAAC+CGG - chr2.3:7964658-7964677 None:intergenic 50.0%
GAGCCTGAAGGTTTAGAAGC+AGG + chr2.3:7962668-7962687 MS.gene42837:CDS 50.0%
GATGATCCGACGACTCATTC+TGG - chr2.3:7965701-7965720 None:intergenic 50.0%
GCAGTGTACCTTACTGCTCA+TGG + chr2.3:7963393-7963412 MS.gene42837:intron 50.0%
GCGATGAAGATGGGGTGATT+AGG - chr2.3:7964392-7964411 None:intergenic 50.0%
GGCTTCAAAGTCTTCCTCAG+TGG + chr2.3:7965998-7966017 MS.gene42837:CDS 50.0%
GGTTTAGAAGCAGGTGGAGA+GGG + chr2.3:7962677-7962696 MS.gene42837:CDS 50.0%
GTCGAAGGCTGAAGAAACTG+CGG + chr2.3:7964269-7964288 MS.gene42837:CDS 50.0%
TACTTTGCTTCCACAGGCAG+AGG + chr2.3:7962238-7962257 MS.gene42837:CDS 50.0%
TATCCATTGAGATCCCTGGC+AGG + chr2.3:7964689-7964708 MS.gene42837:CDS 50.0%
TCACCCAGTCACCTTATCAC+TGG + chr2.3:7964310-7964329 MS.gene42837:CDS 50.0%
TCAGGAACCCACTGACCATA+GGG + chr2.3:7963747-7963766 MS.gene42837:CDS 50.0%
TCTCCAGCTGCGATGAAGAT+GGG - chr2.3:7964401-7964420 None:intergenic 50.0%
TCTGATACCAGCACTCATGG+AGG + chr2.3:7962758-7962777 MS.gene42837:CDS 50.0%
TCTTGACCTTGCAAGACCCT+AGG - chr2.3:7964665-7964684 None:intergenic 50.0%
TGAGCAGTAAGGTACACTGC+AGG - chr2.3:7963393-7963412 None:intergenic 50.0%
TGCAAAAGACCTGCATGGTG+TGG + chr2.3:7963089-7963108 MS.gene42837:CDS 50.0%
TGGTTGTTGGGGATGATCCA+TGG + chr2.3:7965437-7965456 MS.gene42837:CDS 50.0%
TTTCCTGCCAGGGATCTCAA+TGG - chr2.3:7964695-7964714 None:intergenic 50.0%
! AGCTGGAGACAGTGGGTTTA+TGG + chr2.3:7964412-7964431 MS.gene42837:intron 50.0%
! GGAAACGAACCGGTTTCCTA+GGG + chr2.3:7964646-7964665 MS.gene42837:CDS 50.0%
! TGGATTTTCCTTATCGGCGG+CGG + chr2.3:7965102-7965121 MS.gene42837:CDS 50.0%
!! TCCATGAGTGCTGGTATCAG+AGG - chr2.3:7962759-7962778 None:intergenic 50.0%
AAGACCTGCATGGTGTGGAG+TGG + chr2.3:7963094-7963113 MS.gene42837:CDS 55.0%
AGAATCTGGCTGTCCCACTG+AGG - chr2.3:7966015-7966034 None:intergenic 55.0%
AGAGCTGCTCGACCGAGAAA+CGG + chr2.3:7963462-7963481 MS.gene42837:CDS 55.0%
AGGCTGAAGAAACTGCGGAC+GGG + chr2.3:7964274-7964293 MS.gene42837:CDS 55.0%
CAATCTTCAGCAGCTCGACG+AGG - chr2.3:7962794-7962813 None:intergenic 55.0%
CCGAAACAAGCAGAAGCTGC+AGG + chr2.3:7964988-7965007 MS.gene42837:CDS 55.0%
CGGTTTCCTAGGGTCTTGCA+AGG + chr2.3:7964656-7964675 MS.gene42837:CDS 55.0%
CTCCAGCTGCGATGAAGATG+GGG - chr2.3:7964400-7964419 None:intergenic 55.0%
CTTTGTCAGGTCAGCCAAGG+AGG + chr2.3:7963216-7963235 MS.gene42837:intron 55.0%
GCCTCTGATACCAGCACTCA+TGG + chr2.3:7962755-7962774 MS.gene42837:CDS 55.0%
GGGACGCAGTGCTCTTTCTA+AGG + chr2.3:7963294-7963313 MS.gene42837:CDS 55.0%
GTACGCTTCAACGGCACAGT+TGG - chr2.3:7964067-7964086 None:intergenic 55.0%
GTAGACGGATCGATCTCCCA+AGG - chr2.3:7964220-7964239 None:intergenic 55.0%
GTAGTGAGCAGATGCCTCCT+TGG - chr2.3:7963233-7963252 None:intergenic 55.0%
GTCTCCAGCTGCGATGAAGA+TGG - chr2.3:7964402-7964421 None:intergenic 55.0%
TACACAGGTCCGATGGGATG+AGG + chr2.3:7964162-7964181 MS.gene42837:intron 55.0%
TCATCGCAGCTGGAGACAGT+GGG + chr2.3:7964405-7964424 MS.gene42837:intron 55.0%
TTCATCGCAGCTGGAGACAG+TGG + chr2.3:7964404-7964423 MS.gene42837:intron 55.0%
TTGCTTCCACAGGCAGAGGT+AGG + chr2.3:7962242-7962261 MS.gene42837:intron 55.0%
! CGGAAACGAACCGGTTTCCT+AGG + chr2.3:7964645-7964664 MS.gene42837:CDS 55.0%
!! AGGAGGCATCTGCTCACTAC+TGG + chr2.3:7963233-7963252 MS.gene42837:CDS 55.0%
CACCCCATCTTCATCGCAGC+TGG + chr2.3:7964395-7964414 MS.gene42837:intron 60.0%
GAAGCAGGTGGAGAGGGAGA+TGG + chr2.3:7962683-7962702 MS.gene42837:CDS 60.0%
GGCATCTGCTCACTACTGGC+TGG + chr2.3:7963237-7963256 MS.gene42837:CDS 60.0%
GGTGGTTTCCGCCGCCGATA+AGG - chr2.3:7965113-7965132 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 7961737 7966058 7961737 ID=MS.gene42837
chr2.3 mRNA 7961737 7966058 7961737 ID=MS.gene42837.t1;Parent=MS.gene42837
chr2.3 exon 7961737 7962084 7961737 ID=MS.gene42837.t1.exon1;Parent=MS.gene42837.t1
chr2.3 CDS 7961737 7962084 7961737 ID=cds.MS.gene42837.t1;Parent=MS.gene42837.t1
chr2.3 exon 7962203 7962259 7962203 ID=MS.gene42837.t1.exon2;Parent=MS.gene42837.t1
chr2.3 CDS 7962203 7962259 7962203 ID=cds.MS.gene42837.t1;Parent=MS.gene42837.t1
chr2.3 exon 7962641 7962826 7962641 ID=MS.gene42837.t1.exon3;Parent=MS.gene42837.t1
chr2.3 CDS 7962641 7962826 7962641 ID=cds.MS.gene42837.t1;Parent=MS.gene42837.t1
chr2.3 exon 7963054 7963138 7963054 ID=MS.gene42837.t1.exon4;Parent=MS.gene42837.t1
chr2.3 CDS 7963054 7963138 7963054 ID=cds.MS.gene42837.t1;Parent=MS.gene42837.t1
chr2.3 exon 7963225 7963315 7963225 ID=MS.gene42837.t1.exon5;Parent=MS.gene42837.t1
chr2.3 CDS 7963225 7963315 7963225 ID=cds.MS.gene42837.t1;Parent=MS.gene42837.t1
chr2.3 exon 7963428 7963592 7963428 ID=MS.gene42837.t1.exon6;Parent=MS.gene42837.t1
chr2.3 CDS 7963428 7963592 7963428 ID=cds.MS.gene42837.t1;Parent=MS.gene42837.t1
chr2.3 exon 7963697 7963816 7963697 ID=MS.gene42837.t1.exon7;Parent=MS.gene42837.t1
chr2.3 CDS 7963697 7963816 7963697 ID=cds.MS.gene42837.t1;Parent=MS.gene42837.t1
chr2.3 exon 7963894 7963972 7963894 ID=MS.gene42837.t1.exon8;Parent=MS.gene42837.t1
chr2.3 CDS 7963894 7963972 7963894 ID=cds.MS.gene42837.t1;Parent=MS.gene42837.t1
chr2.3 exon 7964169 7964331 7964169 ID=MS.gene42837.t1.exon9;Parent=MS.gene42837.t1
chr2.3 CDS 7964169 7964331 7964169 ID=cds.MS.gene42837.t1;Parent=MS.gene42837.t1
chr2.3 exon 7964414 7965174 7964414 ID=MS.gene42837.t1.exon10;Parent=MS.gene42837.t1
chr2.3 CDS 7964414 7965174 7964414 ID=cds.MS.gene42837.t1;Parent=MS.gene42837.t1
chr2.3 exon 7965271 7965461 7965271 ID=MS.gene42837.t1.exon11;Parent=MS.gene42837.t1
chr2.3 CDS 7965271 7965461 7965271 ID=cds.MS.gene42837.t1;Parent=MS.gene42837.t1
chr2.3 exon 7965875 7966058 7965875 ID=MS.gene42837.t1.exon12;Parent=MS.gene42837.t1
chr2.3 CDS 7965875 7966058 7965875 ID=cds.MS.gene42837.t1;Parent=MS.gene42837.t1
Gene Sequence

>MS.gene42837

ATGGATATTGATCTGAATGATTCCACAACACAAGTTAAGAAGAATATATGTTGCAATGGTGAATGTGAGAAAAGTGTTTGTTGTGTTTGCACTTTATCTTCTTCTTCATCACCAACATGTTCATCTTCTAGTTCCACTTCGGCTCTTGTTTCTTCATCTTATCTTGAACTATGGCATTCTTGTGCTGGACCTTTAACATCACTTCCAAAGAAAGGGAATGTTGTAGTTTATTTTCCACAAGGTCATTTGGAACAAGTTGCATCTTTGTCTCTCTTTTCTTCATTGGAAATTCCAACTTATGGTCTTCAACCACAAATCTTTTGTAGGGTTGTCAATGTTCAATTACTTGTAAGCACTTAAATTTAGTTAACTTCACTCTTTCATTGAATTGTATATGCTTAATTCACATAGACTTTTTTCATTTGATTTTGTTTAATATTTTCTGTATATTTTTTTCCATTAACAGGCCAATAAGGAGAATGATGAGGTTTACACACAGGTTACTTTGCTTCCACAGGCAGAGGTAGGTTTTATGGTTTAATATATTTGGTCTTATTTCTTTTTTGATGCATTTTGGTTTGGTTTTCATTAAAAATTGGCAAGTTTTGGAATATTATTGTTTTTTTGCAAGTTATAGATTTATAAAAGATGTAATTAATTAGTAAAAAAAATGTACTTAACAATTGATACACATCATTGATGAATGGCTAATGTGATATTGTGATTTATCATTAAACTTTGTTGATCCTCAATAGCTGAACTCAAAAAAATTATAAATCATAACTTCATAGATTCCTTTGTCGAATTTCTCCTTGGGATCCAAATACTAGTGTTATACATGATGCAGCAATTGCTTCTTTGCTCCTACCTCATAAGGTAACTATGAATCTTGTGTTGCATTCAGTTAGCAGGGATGTGTTTGGATGACAAAGAGCCTGAAGGTTTAGAAGCAGGTGGAGAGGGAGATGGAAGATCGCCTACAAAGTTAGCTTCTCACATGTTTTGCAAAACACTCACTGCCTCTGATACCAGCACTCATGGAGGGTTTTCTGTTCCTCGTCGAGCTGCTGAAGATTGTTTTCCTCCTTTGGTATGAGTATGACACTATGAGTCTGTTTGGATTGGCTTATTTGAGTTTATCTACTGGCATACATACTTGTGACACTGTTTGGAAGAACATTTTATAGTAGCTTATAATGACATGTCTGTCAGCTATTTTCAGCTTATTTTCATTAGCTAATTTATTTAATTTTCTGACCTGAAATTGTTGGAAAGTTCGAAGGTGGTGATGAATTCTGTTTATTTTCACTTCTTTAGGATTATAAGCAGCAGAGACCCTCTCAAGAGCTTGTTGCAAAAGACCTGCATGGTGTGGAGTGGAAATTTCGCCATATTTATCGAGGTAGGTGAAACAGAAATATTGTGATTGGTTGGATTCAAATATTGACAATGAATGAAACAGAAATTCCATGTTGTAATCTTTGTCAGGTCAGCCAAGGAGGCATCTGCTCACTACTGGCTGGAGTGCTTTTGTTAGCCAAAAGAATCTTGTTTCTGGGGACGCAGTGCTCTTTCTAAGGTGTGTGTTTGTGTTGAACTGAGAGCTTTTGAATTGGCATTAATCTGTATATGCTAGATATTTCATATGTTGTTCCTGCAGTGTACCTTACTGCTCATGGATCTCTATGTAGGGGTGAAAACGGAGAGTTAAGATTGGGAATCAGAAGAGCTGCTCGACCGAGAAACGGTCTTCCTGAATCAATTGTTGGTAACCAGAGTTGTTCTCCTAGTTTCCTTTCTTCAGTGGCTAATGCTATCTCCGCAAAAAGCATGTTTCATGTTTTCTACAGTCCAAGGTACTTGATTAGCAGATACAGTTTTCTTGTTTTGCAAAATGTTGGATAAAGAGTTATTTTATCCCACATGTATATTTAATATGTTTGAATTTGATGTAATACAGAGCTAGTCATGCCGATTTCGTTGTGCCTTACCAAAAGTATGCTAAAAGCATCAGGAACCCACTGACCATAGGGACAAGATTCAAAATGAAATTTGAAATGGATGAATCTCCAGAAAGAAGGTCAGCTATAACATTAGTTATACATGTTTAGCCATTATCTGTATTCTACAACATGATATCATTTTCATGTCTTGCAGGTGTAGTAGCGGTATAGTGACTGGAATGAGTGATTTGGATCCCTATAAATGGCCCAAGTCAAAATGGAGATGCTTGATGGTATATTTTCTACTTTCTTTATACACTAATACTATGCAGTATGTTACGATCGTATTATACATTTGGTATTTGCTATAGATATTTATCATCACCAACTGTGCCGTTGAAGCGTACGCCTTTCTAAACATTACATTAATATATTAATAACCAAATGATGAGAGCTTAATCAATAAAAGCTATCTGTGATATTACACAGGTCCGATGGGATGAGGATATTGAGGCTAATCATCAAGATAGAGTCTCTCCTTGGGAGATCGATCCGTCTACTTCTCTCCCTCCCTTGAACATTCAATCTTGTCGAAGGCTGAAGAAACTGCGGACGGGTCTGCAAGTTGAATCACCCAGTCACCTTATCACTGGTATGAATCCAAATGTACGAGATAACTAAATAACATTAACCACTAAACTTATTGTGTCCTAATCACCCCATCTTCATCGCAGCTGGAGACAGTGGGTTTATGGACTTTGATGAGTCTATAAGATCGACCAAGGTCTTGCAAGGTCAAGAAAAAACAAGTTTTATGTCACTATATTATGGATGTGACACAGTAACTAAGCAGAAAGAATTTGATATCAATTCTCTAAGACATACTAATCTTGCATCAAATGGAGCAAGAAAGATTACTTCTTCCGAGTTTACGAGGGTTCAGCCTTCTAGTTATGCAGACTTCACGGAAACGAACCGGTTTCCTAGGGTCTTGCAAGGTCAAGAAATATATCCATTGAGATCCCTGGCAGGAAAGGTTGATCTAAACCTTAACTCTTGGGGTAAAACCAATGTTAGTTACACAAATTATAACCTGCATAATGCAACCAAACTTAACTTTCACTCATTAGGATCAGAAGTTCTTCAAAATTCCTCTTTTCCATATGGTGATATACACAAAGTTGGTCAAGGTAGCAGCATGCTGTGCTCCAAACCAACCAATTTCCAACTAGAGAATGTTTCATTTAATACTCCTTCAGCTCAGATAGGTGCATTGAGAAATGAAGTTGGAATATCAGGTTTCACAATCCGAAACAAGCAGAAGCTGCAGGACAATATTTCTGCTGCTGCTTCTCTAGGTGCAAACTTGAGGATTTCAAATGACAAAAATTTCAACGCGAAGGTAAATCCTTGTAGACTATTTGGATTTTCCTTATCGGCGGCGGAAACCACCTCACAAAATCTACAGAACTCTGCTAAAAGAAGTTGCACGAAGGTGAGCGACGATAGCAACCGAGTTATATTGTGATATGAATTTTTCTCTATTCCTTTGACAATTTGCCAACGCATATGTAATATACAATGAATGAAGGTTCACAAACAAAGGAGCTTAGTTGGAAGAGCCATTGATCTCTCAAGATTGAGCAGCTACAATGATCTGGTGAGTGAACTAGAGAGACTATTTGGCATGGAAGGTCTTCTAAGAGATCCTGACAAAGGATGGAGAATCCTCTACACTGACAGTGAAAATGACATTATGGTTGTTGGGGATGATCCATGGCAGTAAGTTTTACTAAAAATGCTTCTTTTGTCTATTTGTAAATGGTATACACACCATCTGTTTCAGCCATTAAATCAGTATAAATATTTCAAAATATCGATCTAATGGCTATGACTTATGTTGTCCCGGTACACCAATTAAAAACGGATGCACCTTGACTTCGATTGTCTGCTGTAACAATATCACACATTCACCAGTGTAAGTTAGAAAACCATTGAATAAATATCATATGGTTCATCCAGAATGAGTCGTCGGATCATCATTCAATGGTTTTTTTGACTGACTGTGCCTTGTGATATTATATTTCAAATGTCGGGCCTGAATGAGTTGTCCTATTGAATCATTCTATCCTATGTAACATATTATGGATGATATGATACATACTGAAAAAATACACTCACCCTTTTGCCTGCAGTGAGTTCTGTGTTATGGTATCAAAAATCCATATATATACACAAGAAGAAGTGGAGAAGATGACAATTGGGATGATGAATGATGATAACCAGAGTTGTTTGGAACATACACCATTGATTGTGGAGGCTTCAAAGTCTTCCTCAGTGGGACAGCCAGATTCTTCTCCAACAGTAGTTAGAATCTAG
Protein sequence

>MS.gene42837.t1

MDIDLNDSTTQVKKNICCNGECEKSVCCVCTLSSSSSPTCSSSSSTSALVSSSYLELWHSCAGPLTSLPKKGNVVVYFPQGHLEQVASLSLFSSLEIPTYGLQPQIFCRVVNVQLLANKENDEVYTQVTLLPQAELAGMCLDDKEPEGLEAGGEGDGRSPTKLASHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSAFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIVGNQSCSPSFLSSVANAISAKSMFHVFYSPRASHADFVVPYQKYAKSIRNPLTIGTRFKMKFEMDESPERRCSSGIVTGMSDLDPYKWPKSKWRCLMVRWDEDIEANHQDRVSPWEIDPSTSLPPLNIQSCRRLKKLRTGLQVESPSHLITAGDSGFMDFDESIRSTKVLQGQEKTSFMSLYYGCDTVTKQKEFDINSLRHTNLASNGARKITSSEFTRVQPSSYADFTETNRFPRVLQGQEIYPLRSLAGKVDLNLNSWGKTNVSYTNYNLHNATKLNFHSLGSEVLQNSSFPYGDIHKVGQGSSMLCSKPTNFQLENVSFNTPSAQIGALRNEVGISGFTIRNKQKLQDNISAAASLGANLRISNDKNFNAKVNPCRLFGFSLSAAETTSQNLQNSAKRSCTKVHKQRSLVGRAIDLSRLSSYNDLVSELERLFGMEGLLRDPDKGWRILYTDSENDIMVVGDDPWHEFCVMVSKIHIYTQEEVEKMTIGMMNDDNQSCLEHTPLIVEASKSSSVGQPDSSPTVVRI