Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26802.t1 | XP_003609850.1 | 95.7 | 300 | 13 | 0 | 1 | 300 | 1 | 300 | 1.70E-169 | 605.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26802.t1 | G7JQ18 | 95.7 | 300 | 13 | 0 | 1 | 300 | 1 | 300 | 1.2e-169 | 605.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049397 | MS.gene26802 | 0.803068 | 4.16E-49 | -1.69E-46 |
| MS.gene049418 | MS.gene26802 | 0.808619 | 2.83E-50 | -1.69E-46 |
| MS.gene049660 | MS.gene26802 | 0.828852 | 7.14E-55 | -1.69E-46 |
| MS.gene049989 | MS.gene26802 | 0.850051 | 2.18E-60 | -1.69E-46 |
| MS.gene050297 | MS.gene26802 | 0.875892 | 2.15E-68 | -1.69E-46 |
| MS.gene05054 | MS.gene26802 | 0.822925 | 1.82E-53 | -1.69E-46 |
| MS.gene051067 | MS.gene26802 | 0.809889 | 1.51E-50 | -1.69E-46 |
| MS.gene051629 | MS.gene26802 | 0.803106 | 4.08E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene26802 | 0.817187 | 3.75E-52 | -1.69E-46 |
| MS.gene052367 | MS.gene26802 | 0.819746 | 9.88E-53 | -1.69E-46 |
| MS.gene053536 | MS.gene26802 | 0.813049 | 3.12E-51 | -1.69E-46 |
| MS.gene053538 | MS.gene26802 | 0.81556 | 8.69E-52 | -1.69E-46 |
| MS.gene054643 | MS.gene26802 | 0.807067 | 6.06E-50 | -1.69E-46 |
| MS.gene054999 | MS.gene26802 | 0.825815 | 3.82E-54 | -1.69E-46 |
| MS.gene056041 | MS.gene26802 | 0.8038 | 2.93E-49 | -1.69E-46 |
| MS.gene056526 | MS.gene26802 | 0.81013 | 1.34E-50 | -1.69E-46 |
| MS.gene058196 | MS.gene26802 | 0.812502 | 4.11E-51 | -1.69E-46 |
| MS.gene058197 | MS.gene26802 | 0.830166 | 3.42E-55 | -1.69E-46 |
| MS.gene058198 | MS.gene26802 | 0.83147 | 1.64E-55 | -1.69E-46 |
| MS.gene059300 | MS.gene26802 | 0.85874 | 6.70E-63 | -1.69E-46 |
| MS.gene059424 | MS.gene26802 | 0.805394 | 1.36E-49 | -1.69E-46 |
| MS.gene060473 | MS.gene26802 | 0.830034 | 3.69E-55 | -1.69E-46 |
| MS.gene060565 | MS.gene26802 | 0.834524 | 2.85E-56 | -1.69E-46 |
| MS.gene06057 | MS.gene26802 | 0.847873 | 8.78E-60 | -1.69E-46 |
| MS.gene061260 | MS.gene26802 | 0.830444 | 2.93E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26802.t1 | MTR_4g123700 | 95.667 | 300 | 13 | 0 | 1 | 300 | 1 | 300 | 0.0 | 558 |
| MS.gene26802.t1 | MTR_4g105550 | 35.034 | 294 | 162 | 10 | 2 | 279 | 10 | 290 | 1.02e-49 | 167 |
| MS.gene26802.t1 | MTR_4g132450 | 32.567 | 261 | 149 | 13 | 34 | 276 | 38 | 289 | 4.29e-28 | 111 |
| MS.gene26802.t1 | MTR_5g037310 | 29.592 | 294 | 183 | 10 | 13 | 287 | 8 | 296 | 4.33e-28 | 110 |
| MS.gene26802.t1 | MTR_5g037310 | 29.592 | 294 | 183 | 10 | 13 | 287 | 8 | 296 | 5.44e-28 | 110 |
| MS.gene26802.t1 | MTR_8g090055 | 29.811 | 265 | 160 | 9 | 15 | 264 | 10 | 263 | 6.49e-28 | 110 |
| MS.gene26802.t1 | MTR_2g023970 | 33.202 | 253 | 134 | 13 | 34 | 264 | 24 | 263 | 9.23e-28 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26802.t1 | AT3G17350 | 63.115 | 244 | 80 | 3 | 32 | 266 | 29 | 271 | 2.10e-112 | 327 |
| MS.gene26802.t1 | AT3G17350 | 63.750 | 240 | 77 | 3 | 34 | 264 | 31 | 269 | 1.71e-111 | 324 |
| MS.gene26802.t1 | AT5G50290 | 33.582 | 268 | 159 | 8 | 13 | 263 | 1 | 266 | 1.28e-45 | 156 |
| MS.gene26802.t1 | AT1G10380 | 34.940 | 249 | 136 | 9 | 34 | 263 | 29 | 270 | 2.76e-32 | 121 |
| MS.gene26802.t1 | AT1G10380 | 34.940 | 249 | 136 | 9 | 34 | 263 | 29 | 270 | 2.97e-32 | 121 |
| MS.gene26802.t1 | AT1G11915 | 31.489 | 235 | 145 | 6 | 34 | 254 | 31 | 263 | 4.60e-30 | 116 |
Find 59 sgRNAs with CRISPR-Local
Find 92 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTCCTTTGGATTGGGTTTA+TGG | 0.099494 | 8.2:+10457608 | MS.gene26802:CDS |
| GTTTATGAGTATGAATATTT+TGG | 0.176981 | 8.2:+10457535 | MS.gene26802:CDS |
| GTCCTTTGGATTGGGTTTAT+GGG | 0.234143 | 8.2:+10457609 | MS.gene26802:CDS |
| TTATTCTTTCAAACTCCTTC+TGG | 0.239774 | 8.2:+10457182 | MS.gene26802:CDS |
| AAACCGAATGGGTAGTTTAT+AGG | 0.261528 | 8.2:-10457101 | None:intergenic |
| CACACTTGTGATGAGCTTTA+TGG | 0.305918 | 8.2:+10457431 | MS.gene26802:CDS |
| ATTGAGAGGTGTTGGTCCTT+TGG | 0.340253 | 8.2:+10457595 | MS.gene26802:CDS |
| TCCTTCTGATATCATGCTTC+CGG | 0.381010 | 8.2:-10458246 | None:intergenic |
| CAACTTTCACATCCAGTATC+AGG | 0.395675 | 8.2:-10457653 | None:intergenic |
| AAGGAGTGTACAATGCTCTT+TGG | 0.408970 | 8.2:+10458264 | MS.gene26802:CDS |
| CACAATCTGGTGGGATTTGT+GGG | 0.413624 | 8.2:+10457678 | MS.gene26802:CDS |
| TGGCTTGTAGTAGTTGTAGA+TGG | 0.416349 | 8.2:-10457031 | None:intergenic |
| TAAAACAAAGATATTTGTAA+TGG | 0.422370 | 8.2:-10457397 | None:intergenic |
| AGGTGTTGGTCCTTTGGATT+GGG | 0.424565 | 8.2:+10457601 | MS.gene26802:CDS |
| GAGGTGTTGGTCCTTTGGAT+TGG | 0.424668 | 8.2:+10457600 | MS.gene26802:CDS |
| TGTATCTCAGCTGCTGGAAC+CGG | 0.428657 | 8.2:+10458227 | MS.gene26802:intron |
| ATGGAGCAAGTTGACATTGA+TGG | 0.431134 | 8.2:-10457260 | None:intergenic |
| TATAAACTACCCATTCGGTT+TGG | 0.432975 | 8.2:+10457103 | MS.gene26802:CDS |
| TACCCATTCGGTTTGGAAGA+TGG | 0.440399 | 8.2:+10457110 | MS.gene26802:CDS |
| TATTTGTAATGGTTAAGAAC+AGG | 0.444608 | 8.2:-10457386 | None:intergenic |
| ACACAATCTGGTGGGATTTG+TGG | 0.447706 | 8.2:+10457677 | MS.gene26802:CDS |
| TTCGGTTTGGAAGATGGTTG+TGG | 0.449681 | 8.2:+10457116 | MS.gene26802:CDS |
| GCAGGGTGAGAGTGTGTGAA+TGG | 0.463159 | 8.2:-10457057 | None:intergenic |
| TGCTATTATCCCTCCATCAC+AGG | 0.479220 | 8.2:+10457325 | MS.gene26802:CDS |
| ATTCCTATAAACTACCCATT+CGG | 0.492935 | 8.2:+10457098 | MS.gene26802:CDS |
| ATCATGATGAGGTTGAAGAA+TGG | 0.498307 | 8.2:-10457279 | None:intergenic |
| AACCATCTTCCAAACCGAAT+GGG | 0.514516 | 8.2:-10457112 | None:intergenic |
| TGGAGCAAGTTGACATTGAT+GGG | 0.527863 | 8.2:-10457259 | None:intergenic |
| TGTGAAAGTTGTACACAATC+TGG | 0.535884 | 8.2:+10457665 | MS.gene26802:CDS |
| AGTGATAAATTGAGAGGTGT+TGG | 0.537265 | 8.2:+10457587 | MS.gene26802:CDS |
| ATGAGTTTGAAGATTGTGAA+TGG | 0.557897 | 8.2:-10456996 | None:intergenic |
| CAGGGTGAGAGTGTGTGAAT+GGG | 0.561055 | 8.2:-10457056 | None:intergenic |
| CAAGTTTCACTAATTCAACA+AGG | 0.561620 | 8.2:+10457738 | MS.gene26802:CDS |
| TGAGAGTGTGTGAATGGGAA+TGG | 0.572032 | 8.2:-10457051 | None:intergenic |
| AAAACAGTGTCCTGTGATGG+AGG | 0.573412 | 8.2:-10457335 | None:intergenic |
| ACTAATTCAACAAGGGAATG+TGG | 0.573682 | 8.2:+10457746 | MS.gene26802:CDS |
| TATAGGAATGGTACCACATG+AGG | 0.575471 | 8.2:-10457084 | None:intergenic |
| CAACCATCTTCCAAACCGAA+TGG | 0.581667 | 8.2:-10457113 | None:intergenic |
| CTACAATAAGCAAAACCACT+TGG | 0.586476 | 8.2:-10458295 | None:intergenic |
| ATCCCATAAACCCAATCCAA+AGG | 0.604071 | 8.2:-10457611 | None:intergenic |
| ACCGGAAGCATGATATCAGA+AGG | 0.604148 | 8.2:+10458245 | MS.gene26802:CDS |
| TGTACAATGCTCTTTGGACA+CGG | 0.610218 | 8.2:+10458270 | MS.gene26802:CDS |
| GAATGGGTAGTTTATAGGAA+TGG | 0.619390 | 8.2:-10457096 | None:intergenic |
| TGAACTTTGTAAGAACCAGA+AGG | 0.628532 | 8.2:-10457197 | None:intergenic |
| TCACCCTGCAAAACCTCATG+TGG | 0.633355 | 8.2:+10457071 | MS.gene26802:CDS |
| AAACAGTGTCCTGTGATGGA+GGG | 0.633615 | 8.2:-10457334 | None:intergenic |
| TTTAATAGTGATAAATTGAG+AGG | 0.647028 | 8.2:+10457581 | MS.gene26802:CDS |
| TTGAACATGTTTCTGAACTG+TGG | 0.654643 | 8.2:-10457143 | None:intergenic |
| TTATAGCTCGTGAAACAACA+AGG | 0.671730 | 8.2:-10457503 | None:intergenic |
| TCTTTGGACACGGCACCAAG+TGG | 0.673512 | 8.2:+10458280 | MS.gene26802:CDS |
| TGATGGGTCGTAGAGTACCA+TGG | 0.674328 | 8.2:-10457243 | None:intergenic |
| ACTTGTGATGAGCTTTATGG+TGG | 0.679797 | 8.2:+10457434 | MS.gene26802:CDS |
| GGGTTTGATACTGAAACTGA+AGG | 0.680082 | 8.2:+10457698 | MS.gene26802:CDS |
| AAGTTTCACTAATTCAACAA+GGG | 0.686221 | 8.2:+10457739 | MS.gene26802:CDS |
| GAAAGTTGTACACAATCTGG+TGG | 0.691833 | 8.2:+10457668 | MS.gene26802:CDS |
| GTCATGAGAAAATCATGATG+AGG | 0.693658 | 8.2:-10457290 | None:intergenic |
| AAAGTTGTACACAATCTGGT+GGG | 0.724462 | 8.2:+10457669 | MS.gene26802:CDS |
| AGTTTGAAAGAATAACTCAG+TGG | 0.732725 | 8.2:-10457174 | None:intergenic |
| TAGCTCGTGAAACAACAAGG+TGG | 0.804087 | 8.2:-10457500 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCTTTTTTAGAAATTAAAA+AGG | + | chr8.2:10457904-10457923 | MS.gene26802:intron | 10.0% |
| !! | TAAAACAAAGATATTTGTAA+TGG | - | chr8.2:10457400-10457419 | None:intergenic | 15.0% |
| !! | TTTAATAGTGATAAATTGAG+AGG | + | chr8.2:10457581-10457600 | MS.gene26802:CDS | 20.0% |
| !!! | GTTTATGAGTATGAATATTT+TGG | + | chr8.2:10457535-10457554 | MS.gene26802:CDS | 20.0% |
| !!! | TATCTTTGTTTTAACTTTGA+AGG | + | chr8.2:10457407-10457426 | MS.gene26802:CDS | 20.0% |
| !!! | TATTTGGATTTTGAATCATT+TGG | + | chr8.2:10457789-10457808 | MS.gene26802:intron | 20.0% |
| ! | AAATAGAATACGGAAACTTA+CGG | - | chr8.2:10458207-10458226 | None:intergenic | 25.0% |
| ! | AAGTTTCACTAATTCAACAA+GGG | + | chr8.2:10457739-10457758 | MS.gene26802:CDS | 25.0% |
| ! | CTGAGATACAAAATAGAATA+CGG | - | chr8.2:10458217-10458236 | None:intergenic | 25.0% |
| ! | TATTTGTAATGGTTAAGAAC+AGG | - | chr8.2:10457389-10457408 | None:intergenic | 25.0% |
| !!! | CTTTTTTAGTTGATAACAGT+AGG | + | chr8.2:10458071-10458090 | MS.gene26802:intron | 25.0% |
| !!! | TAAGTTTTATCTGAGTTGTT+AGG | + | chr8.2:10458099-10458118 | MS.gene26802:intron | 25.0% |
| AGTTTGAAAGAATAACTCAG+TGG | - | chr8.2:10457177-10457196 | None:intergenic | 30.0% | |
| ATGAGTTTGAAGATTGTGAA+TGG | - | chr8.2:10456999-10457018 | None:intergenic | 30.0% | |
| ATTCCTATAAACTACCCATT+CGG | + | chr8.2:10457098-10457117 | MS.gene26802:CDS | 30.0% | |
| CAAGTTTCACTAATTCAACA+AGG | + | chr8.2:10457738-10457757 | MS.gene26802:CDS | 30.0% | |
| CTACTACTTGGTTTCTTATT+TGG | + | chr8.2:10457773-10457792 | MS.gene26802:intron | 30.0% | |
| GGTGCTAGTTAATATGAATA+GGG | + | chr8.2:10457810-10457829 | MS.gene26802:intron | 30.0% | |
| TGACTACAACAAAAAAACCA+TGG | + | chr8.2:10457226-10457245 | MS.gene26802:CDS | 30.0% | |
| TTATTCTTTCAAACTCCTTC+TGG | + | chr8.2:10457182-10457201 | MS.gene26802:CDS | 30.0% | |
| ! | AGTTTTTCTTCACAAGATGA+GGG | + | chr8.2:10458316-10458335 | MS.gene26802:CDS | 30.0% |
| ! | TAGTTTTTCTTCACAAGATG+AGG | + | chr8.2:10458315-10458334 | MS.gene26802:CDS | 30.0% |
| ! | TCACCAACAACAATTTTGAA+AGG | - | chr8.2:10458039-10458058 | None:intergenic | 30.0% |
| ! | TGGTGCTAGTTAATATGAAT+AGG | + | chr8.2:10457809-10457828 | MS.gene26802:intron | 30.0% |
| !! | CACCAACAACAATTTTGAAA+GGG | - | chr8.2:10458038-10458057 | None:intergenic | 30.0% |
| !!! | GGTTTTTTTGTTGTAGTCAA+TGG | - | chr8.2:10457225-10457244 | None:intergenic | 30.0% |
| AAACCGAATGGGTAGTTTAT+AGG | - | chr8.2:10457104-10457123 | None:intergenic | 35.0% | |
| AAAGTTGTACACAATCTGGT+GGG | + | chr8.2:10457669-10457688 | MS.gene26802:CDS | 35.0% | |
| ACTAATTCAACAAGGGAATG+TGG | + | chr8.2:10457746-10457765 | MS.gene26802:CDS | 35.0% | |
| ATCATGATGAGGTTGAAGAA+TGG | - | chr8.2:10457282-10457301 | None:intergenic | 35.0% | |
| CACCCTTTCAAAATTGTTGT+TGG | + | chr8.2:10458033-10458052 | MS.gene26802:intron | 35.0% | |
| CTACAATAAGCAAAACCACT+TGG | - | chr8.2:10458298-10458317 | None:intergenic | 35.0% | |
| GAAAATCATACAGCACTAAC+TGG | + | chr8.2:10457926-10457945 | MS.gene26802:intron | 35.0% | |
| GAATGGGTAGTTTATAGGAA+TGG | - | chr8.2:10457099-10457118 | None:intergenic | 35.0% | |
| GTCATGAGAAAATCATGATG+AGG | - | chr8.2:10457293-10457312 | None:intergenic | 35.0% | |
| TATAAACTACCCATTCGGTT+TGG | + | chr8.2:10457103-10457122 | MS.gene26802:CDS | 35.0% | |
| TGAACTTTGTAAGAACCAGA+AGG | - | chr8.2:10457200-10457219 | None:intergenic | 35.0% | |
| TGTGAAAGTTGTACACAATC+TGG | + | chr8.2:10457665-10457684 | MS.gene26802:CDS | 35.0% | |
| TTATAGCTCGTGAAACAACA+AGG | - | chr8.2:10457506-10457525 | None:intergenic | 35.0% | |
| ! | AGTGATAAATTGAGAGGTGT+TGG | + | chr8.2:10457587-10457606 | MS.gene26802:CDS | 35.0% |
| ! | GTTTTTCTTCACAAGATGAG+GGG | + | chr8.2:10458317-10458336 | MS.gene26802:CDS | 35.0% |
| ! | TTGAACATGTTTCTGAACTG+TGG | - | chr8.2:10457146-10457165 | None:intergenic | 35.0% |
| ! | TTTTTCTTCACAAGATGAGG+GGG | + | chr8.2:10458318-10458337 | MS.gene26802:CDS | 35.0% |
| AACCATCTTCCAAACCGAAT+GGG | - | chr8.2:10457115-10457134 | None:intergenic | 40.0% | |
| ACAAAAACAGTGTCCTGTGA+TGG | - | chr8.2:10457341-10457360 | None:intergenic | 40.0% | |
| ATCCCATAAACCCAATCCAA+AGG | - | chr8.2:10457614-10457633 | None:intergenic | 40.0% | |
| CAACTTTCACATCCAGTATC+AGG | - | chr8.2:10457656-10457675 | None:intergenic | 40.0% | |
| CACACTTGTGATGAGCTTTA+TGG | + | chr8.2:10457431-10457450 | MS.gene26802:CDS | 40.0% | |
| GAAAGTTGTACACAATCTGG+TGG | + | chr8.2:10457668-10457687 | MS.gene26802:CDS | 40.0% | |
| GAATACGGAAACTTACGGTT+AGG | - | chr8.2:10458202-10458221 | None:intergenic | 40.0% | |
| GAATGTGGTAAGCTACTACT+TGG | + | chr8.2:10457761-10457780 | MS.gene26802:intron | 40.0% | |
| GGGTTTGATACTGAAACTGA+AGG | + | chr8.2:10457698-10457717 | MS.gene26802:CDS | 40.0% | |
| TATAGGAATGGTACCACATG+AGG | - | chr8.2:10457087-10457106 | None:intergenic | 40.0% | |
| TCCTTCTGATATCATGCTTC+CGG | - | chr8.2:10458249-10458268 | None:intergenic | 40.0% | |
| TGTACAATGCTCTTTGGACA+CGG | + | chr8.2:10458270-10458289 | MS.gene26802:CDS | 40.0% | |
| TTGCTTCGAGCTTAGAGTTA+AGG | - | chr8.2:10458159-10458178 | None:intergenic | 40.0% | |
| ! | AAGGAGTGTACAATGCTCTT+TGG | + | chr8.2:10458264-10458283 | MS.gene26802:CDS | 40.0% |
| ! | ACTTGTGATGAGCTTTATGG+TGG | + | chr8.2:10457434-10457453 | MS.gene26802:CDS | 40.0% |
| ! | ATGGAGCAAGTTGACATTGA+TGG | - | chr8.2:10457263-10457282 | None:intergenic | 40.0% |
| ! | ATGGTGGTTGCAATGCTTTT+AGG | + | chr8.2:10457450-10457469 | MS.gene26802:CDS | 40.0% |
| ! | CTATTTTGTATCTCAGCTGC+TGG | + | chr8.2:10458221-10458240 | MS.gene26802:intron | 40.0% |
| ! | GTCCTTTGGATTGGGTTTAT+GGG | + | chr8.2:10457609-10457628 | MS.gene26802:CDS | 40.0% |
| ! | TCTTTTAGTGTGCCTGATAC+TGG | + | chr8.2:10457641-10457660 | MS.gene26802:CDS | 40.0% |
| ! | TGGAGCAAGTTGACATTGAT+GGG | - | chr8.2:10457262-10457281 | None:intergenic | 40.0% |
| ! | TGGCTTGTAGTAGTTGTAGA+TGG | - | chr8.2:10457034-10457053 | None:intergenic | 40.0% |
| ! | TGGTGGTTGCAATGCTTTTA+GGG | + | chr8.2:10457451-10457470 | MS.gene26802:CDS | 40.0% |
| AAAACAGTGTCCTGTGATGG+AGG | - | chr8.2:10457338-10457357 | None:intergenic | 45.0% | |
| ACACAATCTGGTGGGATTTG+TGG | + | chr8.2:10457677-10457696 | MS.gene26802:CDS | 45.0% | |
| CAACCATCTTCCAAACCGAA+TGG | - | chr8.2:10457116-10457135 | None:intergenic | 45.0% | |
| CACAATCTGGTGGGATTTGT+GGG | + | chr8.2:10457678-10457697 | MS.gene26802:CDS | 45.0% | |
| GCAATTGAGCTACCAAAACC+TGG | + | chr8.2:10458175-10458194 | MS.gene26802:intron | 45.0% | |
| TAGCTCGTGAAACAACAAGG+TGG | - | chr8.2:10457503-10457522 | None:intergenic | 45.0% | |
| TGCTATTATCCCTCCATCAC+AGG | + | chr8.2:10457325-10457344 | MS.gene26802:CDS | 45.0% | |
| ! | AAACAGTGTCCTGTGATGGA+GGG | - | chr8.2:10457337-10457356 | None:intergenic | 45.0% |
| ! | ACCGGAAGCATGATATCAGA+AGG | + | chr8.2:10458245-10458264 | MS.gene26802:CDS | 45.0% |
| ! | GGTCCTTTGGATTGGGTTTA+TGG | + | chr8.2:10457608-10457627 | MS.gene26802:CDS | 45.0% |
| ! | GTACCACATGAGGTTTTGCA+GGG | - | chr8.2:10457077-10457096 | None:intergenic | 45.0% |
| ! | TGAGAGTGTGTGAATGGGAA+TGG | - | chr8.2:10457054-10457073 | None:intergenic | 45.0% |
| ! | TTACGGTTAGGACCAGGTTT+TGG | - | chr8.2:10458190-10458209 | None:intergenic | 45.0% |
| !! | AGGTGTTGGTCCTTTGGATT+GGG | + | chr8.2:10457601-10457620 | MS.gene26802:CDS | 45.0% |
| !! | ATTGAGAGGTGTTGGTCCTT+TGG | + | chr8.2:10457595-10457614 | MS.gene26802:CDS | 45.0% |
| !! | TACCCATTCGGTTTGGAAGA+TGG | + | chr8.2:10457110-10457129 | MS.gene26802:CDS | 45.0% |
| !! | TTCGGTTTGGAAGATGGTTG+TGG | + | chr8.2:10457116-10457135 | MS.gene26802:CDS | 45.0% |
| GGAAACTTACGGTTAGGACC+AGG | - | chr8.2:10458196-10458215 | None:intergenic | 50.0% | |
| TCACCCTGCAAAACCTCATG+TGG | + | chr8.2:10457071-10457090 | MS.gene26802:CDS | 50.0% | |
| TGTATCTCAGCTGCTGGAAC+CGG | + | chr8.2:10458227-10458246 | MS.gene26802:intron | 50.0% | |
| ! | CAGGGTGAGAGTGTGTGAAT+GGG | - | chr8.2:10457059-10457078 | None:intergenic | 50.0% |
| ! | GGTACCACATGAGGTTTTGC+AGG | - | chr8.2:10457078-10457097 | None:intergenic | 50.0% |
| ! | TGATGGGTCGTAGAGTACCA+TGG | - | chr8.2:10457246-10457265 | None:intergenic | 50.0% |
| !! | GAGGTGTTGGTCCTTTGGAT+TGG | + | chr8.2:10457600-10457619 | MS.gene26802:CDS | 50.0% |
| TCTTTGGACACGGCACCAAG+TGG | + | chr8.2:10458280-10458299 | MS.gene26802:CDS | 55.0% | |
| ! | GCAGGGTGAGAGTGTGTGAA+TGG | - | chr8.2:10457060-10457079 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 10456978 | 10458349 | 10456978 | ID=MS.gene26802 |
| chr8.2 | mRNA | 10456978 | 10458349 | 10456978 | ID=MS.gene26802.t1;Parent=MS.gene26802 |
| chr8.2 | exon | 10456978 | 10457767 | 10456978 | ID=MS.gene26802.t1.exon1;Parent=MS.gene26802.t1 |
| chr8.2 | CDS | 10456978 | 10457767 | 10456978 | ID=cds.MS.gene26802.t1;Parent=MS.gene26802.t1 |
| chr8.2 | exon | 10458237 | 10458349 | 10458237 | ID=MS.gene26802.t1.exon2;Parent=MS.gene26802.t1 |
| chr8.2 | CDS | 10458237 | 10458349 | 10458237 | ID=cds.MS.gene26802.t1;Parent=MS.gene26802.t1 |
| Gene Sequence |
| Protein sequence |
