Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26923.t1 | XP_013466041.1 | 98.1 | 469 | 9 | 0 | 1 | 469 | 1 | 469 | 1.50E-281 | 978 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26923.t1 | P0C7Q8 | 56.7 | 533 | 164 | 7 | 1 | 468 | 1 | 531 | 1.3e-164 | 580.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26923.t1 | A0A072VE38 | 98.1 | 469 | 9 | 0 | 1 | 469 | 1 | 469 | 1.1e-281 | 978.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene26923.t1 | TR | Others |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049260 | MS.gene26923 | -0.833924 | 4.03E-56 | -1.69E-46 |
| MS.gene050301 | MS.gene26923 | -0.832884 | 7.33E-56 | -1.69E-46 |
| MS.gene05101 | MS.gene26923 | -0.803519 | 3.35E-49 | -1.69E-46 |
| MS.gene052178 | MS.gene26923 | -0.800265 | 1.56E-48 | -1.69E-46 |
| MS.gene052287 | MS.gene26923 | -0.811157 | 8.06E-51 | -1.69E-46 |
| MS.gene052344 | MS.gene26923 | 0.807398 | 5.15E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene26923 | -0.829567 | 4.79E-55 | -1.69E-46 |
| MS.gene054473 | MS.gene26923 | -0.816101 | 6.58E-52 | -1.69E-46 |
| MS.gene055277 | MS.gene26923 | -0.800341 | 1.51E-48 | -1.69E-46 |
| MS.gene055303 | MS.gene26923 | -0.855819 | 4.88E-62 | -1.69E-46 |
| MS.gene055390 | MS.gene26923 | -0.810149 | 1.33E-50 | -1.69E-46 |
| MS.gene055422 | MS.gene26923 | -0.813826 | 2.10E-51 | -1.69E-46 |
| MS.gene055428 | MS.gene26923 | -0.824037 | 1.00E-53 | -1.69E-46 |
| MS.gene056772 | MS.gene26923 | -0.822452 | 2.35E-53 | -1.69E-46 |
| MS.gene057121 | MS.gene26923 | -0.842131 | 3.12E-58 | -1.69E-46 |
| MS.gene057245 | MS.gene26923 | -0.808742 | 2.67E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene26923 | -0.821609 | 3.69E-53 | -1.69E-46 |
| MS.gene05811 | MS.gene26923 | -0.838667 | 2.51E-57 | -1.69E-46 |
| MS.gene05907 | MS.gene26923 | -0.803172 | 3.96E-49 | -1.69E-46 |
| MS.gene059518 | MS.gene26923 | -0.827764 | 1.31E-54 | -1.69E-46 |
| MS.gene05984 | MS.gene26923 | -0.826103 | 3.26E-54 | -1.69E-46 |
| MS.gene059894 | MS.gene26923 | -0.807553 | 4.78E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene26923 | -0.804855 | 1.77E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26923.t1 | MTR_1g021835 | 99.360 | 469 | 3 | 0 | 1 | 469 | 1 | 469 | 0.0 | 981 |
| MS.gene26923.t1 | MTR_1g021835 | 99.180 | 366 | 3 | 0 | 1 | 366 | 1 | 366 | 0.0 | 771 |
| MS.gene26923.t1 | MTR_1g021835 | 99.349 | 307 | 2 | 0 | 1 | 307 | 1 | 307 | 0.0 | 648 |
| MS.gene26923.t1 | MTR_5g018900 | 59.160 | 524 | 158 | 6 | 1 | 468 | 1 | 524 | 0.0 | 616 |
| MS.gene26923.t1 | MTR_8g078410 | 58.192 | 531 | 159 | 9 | 1 | 468 | 1 | 531 | 0.0 | 576 |
| MS.gene26923.t1 | MTR_5g081160 | 52.510 | 478 | 211 | 7 | 1 | 468 | 32 | 503 | 1.79e-172 | 494 |
| MS.gene26923.t1 | MTR_3g069410 | 51.313 | 495 | 201 | 12 | 1 | 468 | 31 | 512 | 3.04e-161 | 466 |
| MS.gene26923.t1 | MTR_5g018910 | 56.818 | 88 | 38 | 0 | 106 | 193 | 493 | 580 | 1.43e-31 | 128 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26923.t1 | AT1G19270 | 60.600 | 533 | 143 | 9 | 1 | 468 | 1 | 531 | 0.0 | 615 |
| MS.gene26923.t1 | AT1G19270 | 60.600 | 533 | 143 | 9 | 1 | 468 | 1 | 531 | 0.0 | 615 |
| MS.gene26923.t1 | AT4G36860 | 63.908 | 435 | 142 | 6 | 43 | 468 | 149 | 577 | 0.0 | 560 |
| MS.gene26923.t1 | AT4G36860 | 63.908 | 435 | 142 | 6 | 43 | 468 | 125 | 553 | 0.0 | 559 |
| MS.gene26923.t1 | AT2G39830 | 52.965 | 489 | 199 | 9 | 1 | 468 | 49 | 527 | 2.24e-171 | 492 |
| MS.gene26923.t1 | AT2G39830 | 53.125 | 480 | 203 | 7 | 1 | 468 | 49 | 518 | 6.67e-171 | 491 |
| MS.gene26923.t1 | AT2G39830 | 52.642 | 492 | 199 | 10 | 1 | 468 | 49 | 530 | 2.86e-169 | 487 |
| MS.gene26923.t1 | AT4G36860 | 64.329 | 328 | 108 | 4 | 43 | 365 | 125 | 448 | 9.42e-155 | 447 |
| MS.gene26923.t1 | AT2G39830 | 51.444 | 381 | 159 | 8 | 1 | 365 | 49 | 419 | 4.20e-130 | 384 |
| MS.gene26923.t1 | AT5G66610 | 46.556 | 421 | 202 | 8 | 54 | 462 | 15 | 424 | 2.34e-115 | 346 |
| MS.gene26923.t1 | AT5G66620 | 45.755 | 424 | 200 | 9 | 54 | 461 | 231 | 640 | 5.08e-115 | 352 |
| MS.gene26923.t1 | AT5G66610 | 45.824 | 443 | 218 | 9 | 35 | 462 | 116 | 551 | 6.69e-115 | 349 |
| MS.gene26923.t1 | AT5G66620 | 45.755 | 424 | 200 | 9 | 54 | 461 | 222 | 631 | 7.02e-115 | 352 |
| MS.gene26923.t1 | AT5G66620 | 45.755 | 424 | 200 | 9 | 54 | 461 | 222 | 631 | 7.02e-115 | 352 |
| MS.gene26923.t1 | AT5G66610 | 43.404 | 470 | 217 | 10 | 35 | 462 | 116 | 578 | 1.11e-109 | 337 |
| MS.gene26923.t1 | AT5G66630 | 46.995 | 366 | 167 | 10 | 110 | 461 | 346 | 698 | 2.35e-98 | 310 |
| MS.gene26923.t1 | AT5G17890 | 47.170 | 371 | 181 | 8 | 111 | 468 | 1240 | 1608 | 1.54e-94 | 313 |
| MS.gene26923.t1 | AT5G66640 | 39.062 | 448 | 230 | 12 | 39 | 461 | 9 | 438 | 1.25e-93 | 291 |
| MS.gene26923.t1 | AT5G66640 | 39.062 | 448 | 230 | 12 | 39 | 461 | 9 | 438 | 1.25e-93 | 291 |
| MS.gene26923.t1 | AT5G66640 | 39.062 | 448 | 231 | 12 | 39 | 461 | 40 | 470 | 3.50e-93 | 291 |
| MS.gene26923.t1 | AT5G66640 | 39.062 | 448 | 230 | 12 | 39 | 461 | 40 | 469 | 4.45e-93 | 290 |
| MS.gene26923.t1 | AT5G66640 | 45.511 | 323 | 156 | 6 | 158 | 461 | 10 | 331 | 1.71e-89 | 276 |
| MS.gene26923.t1 | AT5G66640 | 35.491 | 448 | 243 | 13 | 39 | 461 | 40 | 466 | 6.40e-77 | 248 |
| MS.gene26923.t1 | AT5G66640 | 35.491 | 448 | 242 | 13 | 39 | 461 | 40 | 465 | 7.96e-77 | 248 |
| MS.gene26923.t1 | AT5G66620 | 42.491 | 273 | 136 | 7 | 54 | 319 | 222 | 480 | 1.82e-66 | 222 |
Find 123 sgRNAs with CRISPR-Local
Find 452 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCCTTATAGCATGCTTTA+TGG | 0.147926 | 1.3:+3256579 | None:intergenic |
| GGAGATATCTATACTTAATA+TGG | 0.171031 | 1.3:+3253674 | None:intergenic |
| TCAGACATTTCCCCTGTTTA+TGG | 0.175438 | 1.3:-3253782 | MS.gene26923:CDS |
| TATTACTTGCCGTCAACTTC+AGG | 0.242107 | 1.3:-3259617 | MS.gene26923:CDS |
| TATGGTGAAGGGTCCTTTCT+AGG | 0.258048 | 1.3:+3253717 | None:intergenic |
| AGAGCTTCCTTCCATCCTTA+TGG | 0.265230 | 1.3:+3255751 | None:intergenic |
| CATGTTATCATTTCCATGTT+TGG | 0.271952 | 1.3:+3258673 | None:intergenic |
| AGAAGGTATTTGTCAGGTTT+TGG | 0.289094 | 1.3:-3253954 | MS.gene26923:CDS |
| AATATAGGGCACACCCATTC+TGG | 0.293148 | 1.3:-3255982 | MS.gene26923:CDS |
| ATGTTATCATTTCCATGTTT+GGG | 0.306036 | 1.3:+3258674 | None:intergenic |
| AATAGAAGAAAGTCTAAATT+TGG | 0.307251 | 1.3:-3258705 | MS.gene26923:CDS |
| TAAATTGCTTGGGTGCATTC+TGG | 0.307599 | 1.3:-3256798 | MS.gene26923:CDS |
| TCAGCAAGTTCCTCTACTTT+TGG | 0.312173 | 1.3:-3255628 | MS.gene26923:CDS |
| CTGCTGGTCTTATTGAATAT+AGG | 0.329484 | 1.3:-3255997 | MS.gene26923:CDS |
| CATGCATGGCTGCGGCTAAC+AGG | 0.330963 | 1.3:-3254198 | MS.gene26923:intron |
| TGCTGGTCTTATTGAATATA+GGG | 0.342259 | 1.3:-3255996 | MS.gene26923:CDS |
| CTAAACCCATCTCCATAAAC+AGG | 0.350411 | 1.3:+3253770 | None:intergenic |
| GCACGGCAACGGAAGCATTC+AGG | 0.350540 | 1.3:+3256772 | None:intergenic |
| CTTCTTCTAATTGTGATTTG+TGG | 0.366104 | 1.3:+3258747 | None:intergenic |
| TTTCCATAAAGCATGCTATA+AGG | 0.370626 | 1.3:-3256582 | MS.gene26923:CDS |
| TTCTTTCACAGATTACTTAC+CGG | 0.370788 | 1.3:-3254246 | MS.gene26923:intron |
| GAGCTTCCTTCCATCCTTAT+GGG | 0.381406 | 1.3:+3255752 | None:intergenic |
| AACTACCCGTCACCTTGATA+TGG | 0.383599 | 1.3:+3253699 | None:intergenic |
| CTCTGAGAGGCAGAGTCCTC+TGG | 0.389800 | 1.3:+3255170 | None:intergenic |
| ACTGCAATTCTCATTCTATA+CGG | 0.407169 | 1.3:-3254801 | MS.gene26923:CDS |
| CTATTTCCTGTGCCGAGTCT+AGG | 0.412169 | 1.3:+3254870 | None:intergenic |
| TGGCCGCTATCTAAATTGCT+TGG | 0.419143 | 1.3:-3256809 | MS.gene26923:CDS |
| TAGACTTTCTTCTATTGCTC+TGG | 0.423924 | 1.3:+3258712 | None:intergenic |
| ATTTCCCCTGTTTATGGAGA+TGG | 0.425346 | 1.3:-3253776 | MS.gene26923:CDS |
| TCGTGCTATTGCGTTGTCTT+TGG | 0.426970 | 1.3:-3259441 | MS.gene26923:CDS |
| TGCACCTCATAATCAGAGAT+TGG | 0.431937 | 1.3:+3256739 | None:intergenic |
| ATAAGACCAGCAGGGTTTGT+TGG | 0.433014 | 1.3:+3256007 | None:intergenic |
| GGCCGCTATCTAAATTGCTT+GGG | 0.433359 | 1.3:-3256808 | MS.gene26923:CDS |
| TGCTTGCAGACATCACATTT+CGG | 0.436101 | 1.3:+3256548 | None:intergenic |
| CAGCGCGCAGTCAGTTTGTA+TGG | 0.443392 | 1.3:+3254831 | None:intergenic |
| TTTCCCCTGTTTATGGAGAT+GGG | 0.444481 | 1.3:-3253775 | MS.gene26923:CDS |
| TCCCCAAGCTTCTTCTCAAA+AGG | 0.447372 | 1.3:+3253827 | None:intergenic |
| CCTACCAATCTCTGATTATG+AGG | 0.447976 | 1.3:-3256743 | MS.gene26923:intron |
| AGGCAGAGTCCTCTGGTCTC+AGG | 0.449022 | 1.3:+3255177 | None:intergenic |
| TGTTGAAGAAGGTATTTGTC+AGG | 0.458972 | 1.3:-3253960 | MS.gene26923:CDS |
| CCCATCGGGAAATACTGAAT+TGG | 0.458973 | 1.3:+3258644 | None:intergenic |
| TGCAATACTGAGATTGGTTA+TGG | 0.459883 | 1.3:-3256829 | MS.gene26923:CDS |
| CACTGAATGAAGCGAGGGAG+GGG | 0.460388 | 1.3:-3255593 | MS.gene26923:CDS |
| GTGTCTCGATTCTGCTATCA+TGG | 0.464850 | 1.3:-3255721 | MS.gene26923:CDS |
| TATAGCATGCTTTATGGAAA+GGG | 0.466425 | 1.3:+3256585 | None:intergenic |
| ATTACTTGCCGTCAACTTCA+GGG | 0.481116 | 1.3:-3259616 | MS.gene26923:CDS |
| AGTATTTCCCGATGGGGTAC+AGG | 0.482157 | 1.3:-3258637 | MS.gene26923:intron |
| AATAATGCTGGTTCCAGAAT+GGG | 0.483891 | 1.3:+3255969 | None:intergenic |
| CAATAATGCTGGTTCCAGAA+TGG | 0.490304 | 1.3:+3255968 | None:intergenic |
| TTATAGCATGCTTTATGGAA+AGG | 0.491264 | 1.3:+3256584 | None:intergenic |
| GACGGGATATATTGCCCATA+AGG | 0.491327 | 1.3:-3255766 | MS.gene26923:CDS |
| CTTCAGTATATCAGCATGAA+GGG | 0.492198 | 1.3:+3255680 | None:intergenic |
| ACTCATACCTGTACCCCATC+GGG | 0.492801 | 1.3:+3258630 | None:intergenic |
| GGGAAATGTCTGATTCAATC+TGG | 0.498038 | 1.3:+3253792 | None:intergenic |
| ACTTCAGTATATCAGCATGA+AGG | 0.502726 | 1.3:+3255679 | None:intergenic |
| GAGATATCTATACTTAATAT+GGG | 0.506138 | 1.3:+3253675 | None:intergenic |
| CTATATTCAATAAGACCAGC+AGG | 0.514177 | 1.3:+3255998 | None:intergenic |
| TCTGAGCTTTCTTCTGCACC+AGG | 0.519475 | 1.3:-3253914 | MS.gene26923:CDS |
| TTACATAATAGGATATGTGC+TGG | 0.519801 | 1.3:-3256853 | MS.gene26923:intron |
| AACTCATACCTGTACCCCAT+CGG | 0.520543 | 1.3:+3258629 | None:intergenic |
| CCAATTCAGTATTTCCCGAT+GGG | 0.521103 | 1.3:-3258644 | MS.gene26923:CDS |
| GGATATATTGCCCATAAGGA+TGG | 0.523228 | 1.3:-3255762 | MS.gene26923:CDS |
| TGGTCTCAGGCATATGATAG+TGG | 0.523864 | 1.3:+3255190 | None:intergenic |
| ACAAGTACCCCTGAAGTTGA+CGG | 0.527470 | 1.3:+3259608 | None:intergenic |
| CTCATGAGCTAGAATCGATC+CGG | 0.532124 | 1.3:+3254227 | None:intergenic |
| GCACTGAATGAAGCGAGGGA+GGG | 0.533144 | 1.3:-3255594 | MS.gene26923:CDS |
| CTAAGTCAAGATGTTGAAGA+AGG | 0.540521 | 1.3:-3253971 | MS.gene26923:CDS |
| CCTCATAATCAGAGATTGGT+AGG | 0.540834 | 1.3:+3256743 | None:intergenic |
| TTCGCAAGTATGGCCTAGAA+AGG | 0.547798 | 1.3:-3253730 | MS.gene26923:CDS |
| GCTGGCTGCAATACTGAGAT+TGG | 0.548263 | 1.3:-3256835 | MS.gene26923:CDS |
| TACATGCAGCCACAAGGGAC+GGG | 0.551584 | 1.3:-3255783 | MS.gene26923:intron |
| TATGGAGATGGGTTTAGAGC+CGG | 0.552548 | 1.3:-3253764 | MS.gene26923:CDS |
| ACCAATTCAGTATTTCCCGA+TGG | 0.560239 | 1.3:-3258645 | MS.gene26923:CDS |
| CTCATGAGATGATGCATGCA+TGG | 0.562277 | 1.3:-3254212 | MS.gene26923:CDS |
| GCTGATGAAAAGTTGCTGCC+TGG | 0.562692 | 1.3:+3253896 | None:intergenic |
| CAGATTCCAACAAACCCTGC+TGG | 0.563194 | 1.3:-3256013 | MS.gene26923:CDS |
| GCAATATATCCCGTCCCTTG+TGG | 0.568174 | 1.3:+3255774 | None:intergenic |
| CATGTGAAGGGCAATAATGC+TGG | 0.569427 | 1.3:+3255957 | None:intergenic |
| GTAGGTTGCAAGCACGGCAA+CGG | 0.571499 | 1.3:+3256761 | None:intergenic |
| GTGTTATCATGTTCATGTGA+AGG | 0.573567 | 1.3:+3255944 | None:intergenic |
| TCATTCTATACGGTCTTCCA+AGG | 0.573571 | 1.3:-3254791 | MS.gene26923:intron |
| TTACATGCAGCCACAAGGGA+CGG | 0.574092 | 1.3:-3255784 | MS.gene26923:intron |
| GCATCATATACATCTAAGAC+AGG | 0.574513 | 1.3:-3253860 | MS.gene26923:CDS |
| TCGCTCACAGCTACAACAGC+GGG | 0.574792 | 1.3:+3255919 | None:intergenic |
| TCTGATCATAAGGTTTCTGA+AGG | 0.579206 | 1.3:-3259665 | MS.gene26923:CDS |
| AAGGACCCTTCACCATATCA+AGG | 0.581020 | 1.3:-3253711 | MS.gene26923:CDS |
| CCGTCACCTTGATATGGTGA+AGG | 0.582188 | 1.3:+3253705 | None:intergenic |
| TTGGAGTCACCTCCCAAACA+TGG | 0.583689 | 1.3:-3258686 | MS.gene26923:CDS |
| CTGTTGTAGCTGTGAGCGAA+TGG | 0.584516 | 1.3:-3255915 | MS.gene26923:CDS |
| TGCAGACATCACATTTCGGA+TGG | 0.584761 | 1.3:+3256552 | None:intergenic |
| TTCGCTCACAGCTACAACAG+CGG | 0.587961 | 1.3:+3255918 | None:intergenic |
| TGTCTTTCAACCAAAAGTAG+AGG | 0.588772 | 1.3:+3255618 | None:intergenic |
| ACTGAATGAAGCGAGGGAGG+GGG | 0.590431 | 1.3:-3255592 | MS.gene26923:CDS |
| TCTCTTTACATGCAGCCACA+AGG | 0.590442 | 1.3:-3255789 | MS.gene26923:intron |
| AGCACTGAATGAAGCGAGGG+AGG | 0.591672 | 1.3:-3255595 | MS.gene26923:CDS |
| TGTTATCATGTTCATGTGAA+GGG | 0.592374 | 1.3:+3255945 | None:intergenic |
| TTATCATTTCCATGTTTGGG+AGG | 0.593608 | 1.3:+3258677 | None:intergenic |
| CTTCACCATATCAAGGTGAC+GGG | 0.594001 | 1.3:-3253704 | MS.gene26923:CDS |
| ATATTGCCCATAAGGATGGA+AGG | 0.594506 | 1.3:-3255758 | MS.gene26923:CDS |
| TTACTTGCCGTCAACTTCAG+GGG | 0.595492 | 1.3:-3259615 | MS.gene26923:intron |
| CGTCACCTTGATATGGTGAA+GGG | 0.595573 | 1.3:+3253706 | None:intergenic |
| CCAAGCTTCTTCTCAAAAGG+AGG | 0.596754 | 1.3:+3253830 | None:intergenic |
| AGATGATGCATGCATGGCTG+CGG | 0.598462 | 1.3:-3254206 | MS.gene26923:CDS |
| CCTTCACCATATCAAGGTGA+CGG | 0.608624 | 1.3:-3253705 | MS.gene26923:CDS |
| AGATTGGTAGGTTGCAAGCA+CGG | 0.611730 | 1.3:+3256755 | None:intergenic |
| CTCTTTACATGCAGCCACAA+GGG | 0.615445 | 1.3:-3255788 | MS.gene26923:intron |
| CACCCAAGCAATTTAGATAG+CGG | 0.630015 | 1.3:+3256806 | None:intergenic |
| AGAAGACCTAGACTCGGCAC+AGG | 0.630642 | 1.3:-3254876 | MS.gene26923:CDS |
| ATATGATGCAGATGAGGATG+AGG | 0.632065 | 1.3:+3253874 | None:intergenic |
| GACAAGCACTGAATGAAGCG+AGG | 0.639156 | 1.3:-3255599 | MS.gene26923:CDS |
| ACAAGCACTGAATGAAGCGA+GGG | 0.649587 | 1.3:-3255598 | MS.gene26923:CDS |
| TAAACCCATCTCCATAAACA+GGG | 0.651389 | 1.3:+3253771 | None:intergenic |
| TTCAGTATATCAGCATGAAG+GGG | 0.658616 | 1.3:+3255681 | None:intergenic |
| AGATGTATATGATGCAGATG+AGG | 0.664075 | 1.3:+3253868 | None:intergenic |
| CAATTCAGTATTTCCCGATG+GGG | 0.664407 | 1.3:-3258643 | MS.gene26923:CDS |
| TTGTAGCTGTGAGCGAATGG+AGG | 0.666039 | 1.3:-3255912 | MS.gene26923:intron |
| CAGAGGACTCTGCCTCTCAG+AGG | 0.667518 | 1.3:-3255169 | MS.gene26923:CDS |
| GAAAGGGTAATTTCCAGACG+TGG | 0.673323 | 1.3:+3256601 | None:intergenic |
| CAGTGCTGAGTTCCTCTGAG+AGG | 0.678909 | 1.3:+3255157 | None:intergenic |
| TATCATATGCCTGAGACCAG+AGG | 0.682286 | 1.3:-3255186 | MS.gene26923:CDS |
| TATATTCAATAAGACCAGCA+GGG | 0.688376 | 1.3:+3255999 | None:intergenic |
| CTGATCATAAGGTTTCTGAA+GGG | 0.689401 | 1.3:-3259664 | MS.gene26923:CDS |
| AAACCCATCTCCATAAACAG+GGG | 0.693477 | 1.3:+3253772 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCTAATTATTTACATAAT+AGG | - | chr1.3:3256519-3256538 | MS.gene26923:intron | 10.0% |
| !! | AATTAATAATTTGATTGTAA+CGG | - | chr1.3:3257862-3257881 | MS.gene26923:intron | 10.0% |
| !! | TAATATAAAAATATTTAAGC+TGG | + | chr1.3:3257502-3257521 | None:intergenic | 10.0% |
| !! | TATATATTACCAAAAATTAA+CGG | + | chr1.3:3257341-3257360 | None:intergenic | 10.0% |
| !! | TATATTTATATATGTATGTT+AGG | + | chr1.3:3258278-3258297 | None:intergenic | 10.0% |
| !!! | AAAAAACAAAAAAATGATTT+TGG | + | chr1.3:3255868-3255887 | None:intergenic | 10.0% |
| !!! | AAAAAACAAAAAATTGATTT+TGG | - | chr1.3:3255166-3255185 | MS.gene26923:CDS | 10.0% |
| !!! | ACCAAAAATATATTAATTTT+AGG | + | chr1.3:3254487-3254506 | None:intergenic | 10.0% |
| !!! | CCAAAAATATATTAATTTTA+GGG | + | chr1.3:3254486-3254505 | None:intergenic | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+AGG | - | chr1.3:3256062-3256081 | MS.gene26923:intron | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr1.3:3256062-3256081 | MS.gene26923:intron | 100.0% |
| !! | AAAATAAACAGAAAATTGAT+GGG | + | chr1.3:3256408-3256427 | None:intergenic | 15.0% |
| !! | ATATAAATATATAAGTGACA+TGG | - | chr1.3:3258287-3258306 | MS.gene26923:intron | 15.0% |
| !! | CTATTAAAATGAATAAATGA+TGG | + | chr1.3:3259300-3259319 | None:intergenic | 15.0% |
| !! | GTTGAACAAAAAATAAAAAA+AGG | - | chr1.3:3258893-3258912 | MS.gene26923:intron | 15.0% |
| !!! | ATTAATTTTAGGGTTTATAT+TGG | + | chr1.3:3254476-3254495 | None:intergenic | 15.0% |
| !!! | CCCTAAAATTAATATATTTT+TGG | - | chr1.3:3254483-3254502 | MS.gene26923:intron | 15.0% |
| !!! | TACTTTTTGATATGTAAAAA+TGG | - | chr1.3:3256932-3256951 | MS.gene26923:intron | 15.0% |
| !!! | TGATTTTGGAAATTAAAAAA+GGG | - | chr1.3:3255180-3255199 | MS.gene26923:CDS | 15.0% |
| !!! | TTGATTTTGGAAATTAAAAA+AGG | - | chr1.3:3255179-3255198 | MS.gene26923:CDS | 15.0% |
| !!! | TTTTACATATCAAAAAGTAA+AGG | + | chr1.3:3256931-3256950 | None:intergenic | 15.0% |
| !!! | TTTTGGTTTTTTTTTACTAT+GGG | - | chr1.3:3254500-3254519 | MS.gene26923:intron | 15.0% |
| !!! | TTTTTGGTTTTTTTTTACTA+TGG | - | chr1.3:3254499-3254518 | MS.gene26923:intron | 15.0% |
| !! | AAAAATTACATTTACACACA+TGG | - | chr1.3:3255888-3255907 | MS.gene26923:intron | 20.0% |
| !! | AAAAATTACATTTACACACA+TGG | + | chr1.3:3255907-3255888 | None:intergenic | 20.0% |
| !! | AAATCTAACACTAACAAAAA+TGG | + | chr1.3:3257924-3257943 | None:intergenic | 20.0% |
| !! | AACCTTCATATATACAAAAT+TGG | + | chr1.3:3259384-3259403 | None:intergenic | 20.0% |
| !! | AAGAATGTAAAAAGTTGTTA+AGG | + | chr1.3:3256877-3256896 | None:intergenic | 20.0% |
| !! | AATAAACATCATGAATGAAA+TGG | + | chr1.3:3257238-3257257 | None:intergenic | 20.0% |
| !! | AATAGAAGAAAGTCTAAATT+TGG | - | chr1.3:3254678-3254697 | MS.gene26923:intron | 20.0% |
| !! | AATTTATGAACAAATAACCA+TGG | - | chr1.3:3256287-3256306 | MS.gene26923:intron | 20.0% |
| !! | ACAAACGTAAAATATTATCT+GGG | + | chr1.3:3258696-3258715 | None:intergenic | 20.0% |
| !! | AGAATGTAAAAAGTTGTTAA+GGG | + | chr1.3:3256876-3256895 | None:intergenic | 20.0% |
| !! | AGATACAAACAAATCTAATT+TGG | - | chr1.3:3258040-3258059 | MS.gene26923:intron | 20.0% |
| !! | ATATTAATCTGAAAGTTACA+TGG | - | chr1.3:3258757-3258776 | MS.gene26923:intron | 20.0% |
| !! | ATTAAAATGAGAAATTTGAC+TGG | + | chr1.3:3256684-3256703 | None:intergenic | 20.0% |
| !! | ATTATTCTATTATTTCAGCT+TGG | - | chr1.3:3256442-3256461 | MS.gene26923:intron | 20.0% |
| !! | ATTTATGAACAAATAACCAT+GGG | - | chr1.3:3256288-3256307 | MS.gene26923:intron | 20.0% |
| !! | GAAAATAAACAGAAAATTGA+TGG | + | chr1.3:3256409-3256428 | None:intergenic | 20.0% |
| !! | TATTACTTATTACAAGCATT+AGG | + | chr1.3:3258069-3258088 | None:intergenic | 20.0% |
| !! | TCCATGTTACAATTAAATTA+AGG | - | chr1.3:3257263-3257282 | MS.gene26923:intron | 20.0% |
| !! | TGAAGATAAAGAATAAGATA+CGG | + | chr1.3:3258168-3258187 | None:intergenic | 20.0% |
| !! | TTTCTAAATGATTTCAAACA+TGG | + | chr1.3:3254442-3254461 | None:intergenic | 20.0% |
| !! | TTTGATATGTAAAAATGGAT+GGG | - | chr1.3:3256937-3256956 | MS.gene26923:intron | 20.0% |
| !!! | ATTTTGGAAATTAAGAGAAA+AGG | + | chr1.3:3255852-3255871 | None:intergenic | 20.0% |
| !!! | CATTTTAATGTTTTTGTAAC+TGG | - | chr1.3:3256695-3256714 | MS.gene26923:intron | 20.0% |
| !!! | GTTTGAAATCATTTAGAAAT+TGG | - | chr1.3:3254443-3254462 | MS.gene26923:intron | 20.0% |
| !!! | TTTGTATATATGAAGGTTTT+CGG | - | chr1.3:3259386-3259405 | MS.gene26923:intron | 20.0% |
| !!! | TTTTGATATGTAAAAATGGA+TGG | - | chr1.3:3256936-3256955 | MS.gene26923:intron | 20.0% |
| ! | AAAACATCGAATTATTACCT+TGG | + | chr1.3:3258612-3258631 | None:intergenic | 25.0% |
| ! | AAATCGCTCAATTAAAAACA+TGG | - | chr1.3:3256008-3256027 | MS.gene26923:CDS | 25.0% |
| ! | AAATCGCTCAATTAAAAACA+TGG | + | chr1.3:3256027-3256008 | None:intergenic | 25.0% |
| ! | AATCACAATTCGATGATAAA+AGG | + | chr1.3:3254192-3254211 | None:intergenic | 25.0% |
| ! | AATCGCTCAATTAAAAACAT+GGG | - | chr1.3:3256009-3256028 | MS.gene26923:CDS | 25.0% |
| ! | AATCGCTCAATTAAAAACAT+GGG | + | chr1.3:3256028-3256009 | None:intergenic | 25.0% |
| ! | ATCTTATTCTTTATCTTCAC+AGG | - | chr1.3:3258169-3258188 | MS.gene26923:intron | 25.0% |
| ! | ATGATAACTGATAGTAAATG+TGG | - | chr1.3:3254305-3254324 | MS.gene26923:intron | 25.0% |
| ! | ATGTTATCATTTCCATGTTT+GGG | + | chr1.3:3254712-3254731 | None:intergenic | 25.0% |
| ! | ATTAATCATATGCTTGCTTA+GGG | - | chr1.3:3257518-3257537 | MS.gene26923:intron | 25.0% |
| ! | ATTCAATGCTCATAAACAAA+GGG | - | chr1.3:3256370-3256389 | MS.gene26923:intron | 25.0% |
| ! | ATTTCATGCTTGAATGTAAT+AGG | - | chr1.3:3254282-3254301 | MS.gene26923:intron | 25.0% |
| ! | ATTTGAAGAGGATAAAAAGA+AGG | + | chr1.3:3256107-3256126 | None:intergenic | 25.0% |
| ! | CAGAAAGTGAAAAATGTAAA+AGG | - | chr1.3:3253976-3253995 | MS.gene26923:CDS | 25.0% |
| ! | CTAGTATCTAAATTAGCATT+TGG | + | chr1.3:3257027-3257046 | None:intergenic | 25.0% |
| ! | CTTAACTAGTTCACAATTAA+AGG | - | chr1.3:3258129-3258148 | MS.gene26923:intron | 25.0% |
| ! | CTTGTTAATGCAATTTGTAA+TGG | - | chr1.3:3253793-3253812 | MS.gene26923:CDS | 25.0% |
| ! | GAATGTAAAAAGTTGTTAAG+GGG | + | chr1.3:3256875-3256894 | None:intergenic | 25.0% |
| ! | GACAAACGTAAAATATTATC+TGG | + | chr1.3:3258697-3258716 | None:intergenic | 25.0% |
| ! | GATATTGTAGCTATCATATA+CGG | + | chr1.3:3254384-3254403 | None:intergenic | 25.0% |
| ! | GCCTTAATTTAATTGTAACA+TGG | + | chr1.3:3257267-3257286 | None:intergenic | 25.0% |
| ! | TATTAATCATATGCTTGCTT+AGG | - | chr1.3:3257517-3257536 | MS.gene26923:intron | 25.0% |
| ! | TCCTTTATGATAAAATCCAA+TGG | - | chr1.3:3258333-3258352 | MS.gene26923:intron | 25.0% |
| ! | TCTTATTCTTTATCTTCACA+GGG | - | chr1.3:3258170-3258189 | MS.gene26923:intron | 25.0% |
| ! | TGAAAACTGATCAAGTTTAA+AGG | + | chr1.3:3258487-3258506 | None:intergenic | 25.0% |
| ! | TTATATATGTATGTTAGGAC+AGG | + | chr1.3:3258273-3258292 | None:intergenic | 25.0% |
| ! | TTCATAAATTCATCTCATCA+TGG | + | chr1.3:3256277-3256296 | None:intergenic | 25.0% |
| ! | TTGATATGTAAAAATGGATG+GGG | - | chr1.3:3256938-3256957 | MS.gene26923:intron | 25.0% |
| ! | TTTATCATCGAATTGTGATT+AGG | - | chr1.3:3254192-3254211 | MS.gene26923:intron | 25.0% |
| ! | TTTATGAACAAATAACCATG+GGG | - | chr1.3:3256289-3256308 | MS.gene26923:intron | 25.0% |
| !! | ACCATTGGATTTTATCATAA+AGG | + | chr1.3:3258337-3258356 | None:intergenic | 25.0% |
| !! | ATACACTGTTCATTCTTTTT+AGG | - | chr1.3:3254949-3254968 | MS.gene26923:intron | 25.0% |
| !! | ATGAATCATCAAGGATATTT+TGG | - | chr1.3:3254853-3254872 | MS.gene26923:CDS | 25.0% |
| !! | CTTTCTCGATTTCTTTTTAT+TGG | - | chr1.3:3259215-3259234 | MS.gene26923:intron | 25.0% |
| !! | GGCTTAGTAGAATTTTTAAA+GGG | - | chr1.3:3253695-3253714 | MS.gene26923:CDS | 25.0% |
| !! | GTAAGTTGAATGAAAATGTA+TGG | - | chr1.3:3257540-3257559 | MS.gene26923:intron | 25.0% |
| !! | TGCCAATTTTGTATATATGA+AGG | - | chr1.3:3259379-3259398 | MS.gene26923:intron | 25.0% |
| !! | TGGCTTAGTAGAATTTTTAA+AGG | - | chr1.3:3253694-3253713 | MS.gene26923:CDS | 25.0% |
| !!! | AATCCCATTTTATTTCATTG+CGG | - | chr1.3:3259342-3259361 | MS.gene26923:intron | 25.0% |
| !!! | ATGGTTTAGAATTTTTTGTC+TGG | - | chr1.3:3253812-3253831 | MS.gene26923:CDS | 25.0% |
| !!! | CTTGATATTTTAGAGCATTT+TGG | + | chr1.3:3258101-3258120 | None:intergenic | 25.0% |
| !!! | GAATGTAGCTTTAAAAAAAC+TGG | - | chr1.3:3254909-3254928 | MS.gene26923:intron | 25.0% |
| !!! | TTCTGTTTATTTTCAGTTGA+TGG | - | chr1.3:3256415-3256434 | MS.gene26923:intron | 25.0% |
| AAAGGAGAAATGGAAAAAAC+AGG | + | chr1.3:3254174-3254193 | None:intergenic | 30.0% | |
| ACATCATCACTAAAACACAT+GGG | - | chr1.3:3255947-3255966 | MS.gene26923:CDS | 30.0% | |
| ACATCATCACTAAAACACAT+GGG | + | chr1.3:3255966-3255947 | None:intergenic | 30.0% | |
| ACATGGCTGAATAAAAAAAG+AGG | - | chr1.3:3258774-3258793 | MS.gene26923:intron | 30.0% | |
| ACCTCACAAAATATCTACAA+CGG | + | chr1.3:3259032-3259051 | None:intergenic | 30.0% | |
| ACTGCAATTCTCATTCTATA+CGG | - | chr1.3:3258582-3258601 | MS.gene26923:intron | 30.0% | |
| AGATAAAGAATAAGATACGG+AGG | + | chr1.3:3258165-3258184 | None:intergenic | 30.0% | |
| ATCGCTCAATTAAAAACATG+GGG | + | chr1.3:3256029-3256010 | None:intergenic | 30.0% | |
| ATCTAAATTAGCATTTGGCA+TGG | + | chr1.3:3257022-3257041 | None:intergenic | 30.0% | |
| ATGGTTATACTCATAAGGTA+TGG | + | chr1.3:3257003-3257022 | None:intergenic | 30.0% | |
| CATGTTATCATTTCCATGTT+TGG | + | chr1.3:3254713-3254732 | None:intergenic | 30.0% | |
| CATTCAATGCTCATAAACAA+AGG | - | chr1.3:3256369-3256388 | MS.gene26923:intron | 30.0% | |
| CTGAGATTGAAGTTAAGTTA+TGG | - | chr1.3:3254080-3254099 | MS.gene26923:intron | 30.0% | |
| CTTCTTCTAATTGTGATTTG+TGG | + | chr1.3:3254639-3254658 | None:intergenic | 30.0% | |
| GAAATTCAATAGTAAGCAAC+TGG | + | chr1.3:3254267-3254286 | None:intergenic | 30.0% | |
| GATGATCTTATGAATCATCA+AGG | - | chr1.3:3254844-3254863 | MS.gene26923:CDS | 30.0% | |
| GATTATTGCATCTTCTTGAA+AGG | - | chr1.3:3254019-3254038 | MS.gene26923:intron | 30.0% | |
| GATTTGAAAATGCTATTCTC+TGG | - | chr1.3:3257939-3257958 | MS.gene26923:intron | 30.0% | |
| GGAATTTCTGCTTATATTGA+TGG | - | chr1.3:3254521-3254540 | MS.gene26923:intron | 30.0% | |
| TATAGCATGCTTTATGGAAA+GGG | + | chr1.3:3256801-3256820 | None:intergenic | 30.0% | |
| TATATTCAATAAGACCAGCA+GGG | + | chr1.3:3257387-3257406 | None:intergenic | 30.0% | |
| TCTCAACAATAAGTGAAGAT+TGG | - | chr1.3:3255727-3255746 | MS.gene26923:CDS | 30.0% | |
| TGTTATCATGTTCATGTGAA+GGG | + | chr1.3:3257441-3257460 | None:intergenic | 30.0% | |
| TTACATAATAGGATATGTGC+TGG | - | chr1.3:3256530-3256549 | MS.gene26923:intron | 30.0% | |
| TTATAGCATGCTTTATGGAA+AGG | + | chr1.3:3256802-3256821 | None:intergenic | 30.0% | |
| TTCGATGATAAAAGGAGAAA+TGG | + | chr1.3:3254184-3254203 | None:intergenic | 30.0% | |
| TTCTTTCACAGATTACTTAC+CGG | - | chr1.3:3259137-3259156 | MS.gene26923:intron | 30.0% | |
| TTTCCATAAAGCATGCTATA+AGG | - | chr1.3:3256801-3256820 | MS.gene26923:CDS | 30.0% | |
| TTTCCTTATAGCATGCTTTA+TGG | + | chr1.3:3256807-3256826 | None:intergenic | 30.0% | |
| ! | TCTGTACTCAAGGTTTTTAT+TGG | - | chr1.3:3256725-3256744 | MS.gene26923:intron | 30.0% |
| ! | TGGTTTTTATTCTGTACTCA+AGG | - | chr1.3:3256715-3256734 | MS.gene26923:intron | 30.0% |
| ! | TTAGTACAAGGTATTTGAAG+AGG | + | chr1.3:3256119-3256138 | None:intergenic | 30.0% |
| !! | TGCTGGTCTTATTGAATATA+GGG | - | chr1.3:3257387-3257406 | MS.gene26923:intron | 30.0% |
| !! | TTTTAAAGGGTCTGATCATA+AGG | - | chr1.3:3253708-3253727 | MS.gene26923:CDS | 30.0% |
| !!! | AAGGATATTTTGGTAGGAAA+GGG | - | chr1.3:3254863-3254882 | MS.gene26923:CDS | 30.0% |
| !!! | ATATTTTAGAGCATTTTGGC+AGG | + | chr1.3:3258097-3258116 | None:intergenic | 30.0% |
| !!! | ATCATCAAGGATATTTTGGT+AGG | - | chr1.3:3254857-3254876 | MS.gene26923:CDS | 30.0% |
| !!! | TAGAATTTTTTGTCTGGTGT+TGG | - | chr1.3:3253818-3253837 | MS.gene26923:CDS | 30.0% |
| !!! | TATTTTAGAGCATTTTGGCA+GGG | + | chr1.3:3258096-3258115 | None:intergenic | 30.0% |
| !!! | TTCTGAGGAACTATTTTTTG+TGG | - | chr1.3:3257895-3257914 | MS.gene26923:intron | 30.0% |
| !!! | TTTGATAGGGTTTTGAATGT+AGG | - | chr1.3:3253885-3253904 | MS.gene26923:CDS | 30.0% |
| ACAATTGACAAAAGATAGGG+GGG | + | chr1.3:3254990-3255009 | None:intergenic | 35.0% | |
| ACAATTGACAAAAGATGTGG+GGG | - | chr1.3:3256044-3256063 | MS.gene26923:intron | 35.0% | |
| ACAGCCGCAATGAAATAAAA+TGG | + | chr1.3:3259349-3259368 | None:intergenic | 35.0% | |
| ACTTCAGTATATCAGCATGA+AGG | + | chr1.3:3257707-3257726 | None:intergenic | 35.0% | |
| AGATGTATATGATGCAGATG+AGG | + | chr1.3:3259518-3259537 | None:intergenic | 35.0% | |
| ATCAAGATCGAACACATTGA+CGG | - | chr1.3:3255468-3255487 | MS.gene26923:intron | 35.0% | |
| ATCATCACTAAAACACATGG+GGG | - | chr1.3:3255949-3255968 | MS.gene26923:CDS | 35.0% | |
| ATCATCACTAAAACACATGG+GGG | + | chr1.3:3255968-3255949 | None:intergenic | 35.0% | |
| CACAATTGACAAAAGATAGG+GGG | + | chr1.3:3254991-3255010 | None:intergenic | 35.0% | |
| CACAATTGACAAAAGATGTG+GGG | - | chr1.3:3256043-3256062 | MS.gene26923:intron | 35.0% | |
| CACATCATCACTAAAACACA+TGG | - | chr1.3:3255946-3255965 | MS.gene26923:CDS | 35.0% | |
| CACATCATCACTAAAACACA+TGG | + | chr1.3:3255965-3255946 | None:intergenic | 35.0% | |
| CAGCCGCAATGAAATAAAAT+GGG | + | chr1.3:3259348-3259367 | None:intergenic | 35.0% | |
| CATCATCACTAAAACACATG+GGG | - | chr1.3:3255948-3255967 | MS.gene26923:CDS | 35.0% | |
| CATCATCACTAAAACACATG+GGG | + | chr1.3:3255967-3255948 | None:intergenic | 35.0% | |
| CGCACAATTGACAAAAGATA+GGG | + | chr1.3:3254993-3255012 | None:intergenic | 35.0% | |
| CTAAGTCAAGATGTTGAAGA+AGG | - | chr1.3:3259412-3259431 | MS.gene26923:CDS | 35.0% | |
| CTATATTCAATAAGACCAGC+AGG | + | chr1.3:3257388-3257407 | None:intergenic | 35.0% | |
| CTGATCATAAGGTTTCTGAA+GGG | - | chr1.3:3253719-3253738 | MS.gene26923:CDS | 35.0% | |
| CTTCAGTATATCAGCATGAA+GGG | + | chr1.3:3257706-3257725 | None:intergenic | 35.0% | |
| GAAGAGTTAATCTTGACCAT+TGG | + | chr1.3:3258352-3258371 | None:intergenic | 35.0% | |
| GCACAATTGACAAAAGATAG+GGG | + | chr1.3:3254992-3255011 | None:intergenic | 35.0% | |
| GCACAATTGACAAAAGATGT+GGG | - | chr1.3:3256042-3256061 | MS.gene26923:intron | 35.0% | |
| GCTGCACAAAAACGAATTTA+CGG | - | chr1.3:3256159-3256178 | MS.gene26923:intron | 35.0% | |
| GGAAAACGTTATCCAGATTA+CGG | - | chr1.3:3256966-3256985 | MS.gene26923:intron | 35.0% | |
| GGATATGGAATTGTATACAG+AGG | - | chr1.3:3255666-3255685 | MS.gene26923:CDS | 35.0% | |
| GTGGTATAGTTTGAAGGAAT+TGG | - | chr1.3:3255596-3255615 | MS.gene26923:CDS | 35.0% | |
| GTGTTATCATGTTCATGTGA+AGG | + | chr1.3:3257442-3257461 | None:intergenic | 35.0% | |
| TAAACCCATCTCCATAAACA+GGG | + | chr1.3:3259615-3259634 | None:intergenic | 35.0% | |
| TACAAAAGCTATCCCTTCTT+TGG | + | chr1.3:3256337-3256356 | None:intergenic | 35.0% | |
| TACAGAGGAATTCTTCAAGA+TGG | - | chr1.3:3255681-3255700 | MS.gene26923:CDS | 35.0% | |
| TACCAAAAATTAACGGCAAC+AGG | + | chr1.3:3257334-3257353 | None:intergenic | 35.0% | |
| TAGACTTTCTTCTATTGCTC+TGG | + | chr1.3:3254674-3254693 | None:intergenic | 35.0% | |
| TCGCACAATTGACAAAAGAT+AGG | + | chr1.3:3256059-3256040 | None:intergenic | 35.0% | |
| TCTGATCATAAGGTTTCTGA+AGG | - | chr1.3:3253718-3253737 | MS.gene26923:CDS | 35.0% | |
| TGCATCTTCTTGAAAGGATA+TGG | - | chr1.3:3254025-3254044 | MS.gene26923:intron | 35.0% | |
| TGTCTTTCAACCAAAAGTAG+AGG | + | chr1.3:3257768-3257787 | None:intergenic | 35.0% | |
| TTATCATTTCCATGTTTGGG+AGG | + | chr1.3:3254709-3254728 | None:intergenic | 35.0% | |
| TTATCCAGATTACGGTCTTA+TGG | - | chr1.3:3256974-3256993 | MS.gene26923:intron | 35.0% | |
| TTCAGTATATCAGCATGAAG+GGG | + | chr1.3:3257705-3257724 | None:intergenic | 35.0% | |
| TTGGCATGGTTATACTCATA+AGG | + | chr1.3:3257008-3257027 | None:intergenic | 35.0% | |
| TTTGTGCAGCAGTCTATATT+CGG | + | chr1.3:3256149-3256168 | None:intergenic | 35.0% | |
| ! | ATAGTAAGCAACTGGTTTCT+TGG | + | chr1.3:3254259-3254278 | None:intergenic | 35.0% |
| ! | CTGAACAAGCTTTTATCTCT+GGG | - | chr1.3:3257121-3257140 | MS.gene26923:intron | 35.0% |
| ! | GCATCATATACATCTAAGAC+AGG | - | chr1.3:3259523-3259542 | MS.gene26923:intron | 35.0% |
| ! | GTAGAATTTGAAACCTGCAA+TGG | + | chr1.3:3255271-3255290 | None:intergenic | 35.0% |
| ! | TATCCAGATTACGGTCTTAT+GGG | - | chr1.3:3256975-3256994 | MS.gene26923:intron | 35.0% |
| ! | TCCGTTGTAGATATTTTGTG+AGG | - | chr1.3:3259028-3259047 | MS.gene26923:intron | 35.0% |
| ! | TCTGAACAAGCTTTTATCTC+TGG | - | chr1.3:3257120-3257139 | MS.gene26923:intron | 35.0% |
| ! | TCTTGAAAGGATATGGATTG+CGG | - | chr1.3:3254032-3254051 | MS.gene26923:intron | 35.0% |
| ! | TGAGAAATTTGACTGGTCAA+AGG | + | chr1.3:3256677-3256696 | None:intergenic | 35.0% |
| ! | TGCAATACTGAGATTGGTTA+TGG | - | chr1.3:3256554-3256573 | MS.gene26923:CDS | 35.0% |
| ! | TTTTTATGCCTGCAATTGGA+GGG | - | chr1.3:3257191-3257210 | MS.gene26923:intron | 35.0% |
| !! | AACGGCATTAATTTGTTCTG+AGG | - | chr1.3:3257880-3257899 | MS.gene26923:intron | 35.0% |
| !! | AATAATGCTGGTTCCAGAAT+GGG | + | chr1.3:3257417-3257436 | None:intergenic | 35.0% |
| !! | CTGCTGGTCTTATTGAATAT+AGG | - | chr1.3:3257386-3257405 | MS.gene26923:intron | 35.0% |
| !! | TGTTGAAGAAGGTATTTGTC+AGG | - | chr1.3:3259423-3259442 | MS.gene26923:CDS | 35.0% |
| !! | TTTTCAAGAAGACCTAGACT+CGG | - | chr1.3:3258501-3258520 | MS.gene26923:intron | 35.0% |
| !!! | AGAAGGTATTTGTCAGGTTT+TGG | - | chr1.3:3259429-3259448 | MS.gene26923:CDS | 35.0% |
| !!! | ATTTTAGAGCATTTTGGCAG+GGG | + | chr1.3:3258095-3258114 | None:intergenic | 35.0% |
| !!! | CAAGGATATTTTGGTAGGAA+AGG | - | chr1.3:3254862-3254881 | MS.gene26923:CDS | 35.0% |
| !!! | GCATTTTTTATGCCTGCAAT+TGG | - | chr1.3:3257187-3257206 | MS.gene26923:intron | 35.0% |
| !!! | GGTTTTGAATGTAGGATGAT+TGG | - | chr1.3:3253893-3253912 | MS.gene26923:CDS | 35.0% |
| !!! | TTTTTTATGCCTGCAATTGG+AGG | - | chr1.3:3257190-3257209 | MS.gene26923:intron | 35.0% |
| AAACCCATCTCCATAAACAG+GGG | + | chr1.3:3259614-3259633 | None:intergenic | 40.0% | |
| AAAGATGCTGATGCGATAAG+AGG | + | chr1.3:3259068-3259087 | None:intergenic | 40.0% | |
| AAGATGCTGATGCGATAAGA+GGG | + | chr1.3:3259067-3259086 | None:intergenic | 40.0% | |
| AATTATTCAGGACCAGGAAC+AGG | + | chr1.3:3257073-3257092 | None:intergenic | 40.0% | |
| AATTGACAAAAGATGTGGGG+GGG | - | chr1.3:3256046-3256065 | MS.gene26923:intron | 40.0% | |
| ACCAATTCAGTATTTCCCGA+TGG | - | chr1.3:3254738-3254757 | MS.gene26923:intron | 40.0% | |
| ACTTAGTTCATAGTACCCCA+TGG | + | chr1.3:3256307-3256326 | None:intergenic | 40.0% | |
| AGAACGCAAAGGTTCTTTCA+TGG | + | chr1.3:3258854-3258873 | None:intergenic | 40.0% | |
| ATATGATGCAGATGAGGATG+AGG | + | chr1.3:3259512-3259531 | None:intergenic | 40.0% | |
| ATATTGCCCATAAGGATGGA+AGG | - | chr1.3:3257625-3257644 | MS.gene26923:intron | 40.0% | |
| ATGTAATGCAGACTCAGTTG+TGG | - | chr1.3:3256490-3256509 | MS.gene26923:intron | 40.0% | |
| ATTACTTGCCGTCAACTTCA+GGG | - | chr1.3:3253767-3253786 | MS.gene26923:CDS | 40.0% | |
| ATTTCCCCTGTTTATGGAGA+TGG | - | chr1.3:3259607-3259626 | MS.gene26923:intron | 40.0% | |
| ATTTGCCAAGTCAGAAAGTG+TGG | - | chr1.3:3256220-3256239 | MS.gene26923:intron | 40.0% | |
| CAAAAAGCAGTTCGCAAGTA+TGG | - | chr1.3:3259643-3259662 | MS.gene26923:CDS | 40.0% | |
| CAATTCAGTATTTCCCGATG+GGG | - | chr1.3:3254740-3254759 | MS.gene26923:intron | 40.0% | |
| CAATTGACAAAAGATGTGGG+GGG | - | chr1.3:3256045-3256064 | MS.gene26923:intron | 40.0% | |
| CACAATTCCACTCGTTTCTA+AGG | - | chr1.3:3255431-3255450 | MS.gene26923:intron | 40.0% | |
| CACCCAAGCAATTTAGATAG+CGG | + | chr1.3:3256580-3256599 | None:intergenic | 40.0% | |
| CACTTGATTCTTCATCCTTG+AGG | + | chr1.3:3255502-3255521 | None:intergenic | 40.0% | |
| CCAATTCAGTATTTCCCGAT+GGG | - | chr1.3:3254739-3254758 | MS.gene26923:intron | 40.0% | |
| CCTACCAATCTCTGATTATG+AGG | - | chr1.3:3256640-3256659 | MS.gene26923:intron | 40.0% | |
| CCTCATAATCAGAGATTGGT+AGG | + | chr1.3:3256643-3256662 | None:intergenic | 40.0% | |
| CGCACAATTGACAAAAGATG+TGG | - | chr1.3:3256041-3256060 | MS.gene26923:intron | 40.0% | |
| CGTGGAAAACTACAAAAGCA+AGG | + | chr1.3:3256767-3256786 | None:intergenic | 40.0% | |
| CTAAACCCATCTCCATAAAC+AGG | + | chr1.3:3259616-3259635 | None:intergenic | 40.0% | |
| CTAACTGCAAAAGAACGCAA+AGG | + | chr1.3:3258865-3258884 | None:intergenic | 40.0% | |
| CTACGATTGCAAGGAAAATG+AGG | + | chr1.3:3255302-3255321 | None:intergenic | 40.0% | |
| CTCAAGGATGAAGAATCAAG+TGG | - | chr1.3:3255500-3255519 | MS.gene26923:intron | 40.0% | |
| CTGGTTTCTTGGTTGATCAA+AGG | + | chr1.3:3254248-3254267 | None:intergenic | 40.0% | |
| GAATTGGAGAATGTGACAGA+TGG | - | chr1.3:3255612-3255631 | MS.gene26923:CDS | 40.0% | |
| GACTGCAGACATATATCTCA+TGG | - | chr1.3:3257308-3257327 | MS.gene26923:intron | 40.0% | |
| GAGATATATGTCTGCAGTCA+AGG | + | chr1.3:3257307-3257326 | None:intergenic | 40.0% | |
| GGATATATTGCCCATAAGGA+TGG | - | chr1.3:3257621-3257640 | MS.gene26923:intron | 40.0% | |
| GGCAAACGAAAGTCTATGAT+AGG | + | chr1.3:3256910-3256929 | None:intergenic | 40.0% | |
| GGGAAATGTCTGATTCAATC+TGG | + | chr1.3:3259594-3259613 | None:intergenic | 40.0% | |
| GTAAAAATGGATGGGGAGAA+TGG | - | chr1.3:3256945-3256964 | MS.gene26923:intron | 40.0% | |
| GTAACCAAGAAAATGTACGC+TGG | + | chr1.3:3259267-3259286 | None:intergenic | 40.0% | |
| TAAATTGCTTGGGTGCATTC+TGG | - | chr1.3:3256585-3256604 | MS.gene26923:CDS | 40.0% | |
| TAAGTTCCGCATCCAAAGAA+GGG | - | chr1.3:3256322-3256341 | MS.gene26923:intron | 40.0% | |
| TATTACTTGCCGTCAACTTC+AGG | - | chr1.3:3253766-3253785 | MS.gene26923:CDS | 40.0% | |
| TATTTATACGTGTGCGTGTG+TGG | - | chr1.3:3256186-3256205 | MS.gene26923:intron | 40.0% | |
| TCAGACATTTCCCCTGTTTA+TGG | - | chr1.3:3259601-3259620 | MS.gene26923:intron | 40.0% | |
| TCATTCTATACGGTCTTCCA+AGG | - | chr1.3:3258592-3258611 | MS.gene26923:intron | 40.0% | |
| TGATTGTGACTACGATTGCA+AGG | + | chr1.3:3255311-3255330 | None:intergenic | 40.0% | |
| TGCACCTCATAATCAGAGAT+TGG | + | chr1.3:3256647-3256666 | None:intergenic | 40.0% | |
| TGCTTGCAGACATCACATTT+CGG | + | chr1.3:3256838-3256857 | None:intergenic | 40.0% | |
| TGTTCCTGGTCCTGAATAAT+TGG | - | chr1.3:3257072-3257091 | MS.gene26923:intron | 40.0% | |
| TTAGGACAGGAGAACATAAC+AGG | + | chr1.3:3258260-3258279 | None:intergenic | 40.0% | |
| TTCACAAAAGCTAAACCCCA+TGG | + | chr1.3:3258826-3258845 | None:intergenic | 40.0% | |
| TTCGGCTAGTGTTTAGTACA+AGG | + | chr1.3:3256131-3256150 | None:intergenic | 40.0% | |
| TTTCCCCTGTTTATGGAGAT+GGG | - | chr1.3:3259608-3259627 | MS.gene26923:intron | 40.0% | |
| ! | AAATTGATTCTCCCAAGGGA+TGG | + | chr1.3:3259099-3259118 | None:intergenic | 40.0% |
| ! | ACGCATTTTGCTCTTCTTTG+AGG | + | chr1.3:3255391-3255410 | None:intergenic | 40.0% |
| ! | AGTTCCAGCGTACATTTTCT+TGG | - | chr1.3:3259260-3259279 | MS.gene26923:intron | 40.0% |
| ! | CGTTCTTTTGCAGTTAGGAA+AGG | - | chr1.3:3258868-3258887 | MS.gene26923:intron | 40.0% |
| ! | CTTTGCGTTCTTTTGCAGTT+AGG | - | chr1.3:3258863-3258882 | MS.gene26923:intron | 40.0% |
| ! | CTTTTGTAGTTTTCCACGTC+TGG | - | chr1.3:3256769-3256788 | MS.gene26923:CDS | 40.0% |
| ! | GAATGTGACAGATGGATTTG+CGG | - | chr1.3:3255620-3255639 | MS.gene26923:CDS | 40.0% |
| ! | GAATTTGAAACCTGCAATGG+AGG | + | chr1.3:3255268-3255287 | None:intergenic | 40.0% |
| ! | GCACAAATTGATTCTCCCAA+GGG | + | chr1.3:3259103-3259122 | None:intergenic | 40.0% |
| ! | GTAGATTGTTTTCCTGTTCC+TGG | - | chr1.3:3257058-3257077 | MS.gene26923:intron | 40.0% |
| ! | GTGATTTGTGGTCTGTAAGA+TGG | + | chr1.3:3254627-3254646 | None:intergenic | 40.0% |
| ! | TCAGCAAGTTCCTCTACTTT+TGG | - | chr1.3:3257755-3257774 | MS.gene26923:intron | 40.0% |
| ! | TGCACAAATTGATTCTCCCA+AGG | + | chr1.3:3259104-3259123 | None:intergenic | 40.0% |
| ! | TTTGCCAAGTCAGAAAGTGT+GGG | - | chr1.3:3256221-3256240 | MS.gene26923:intron | 40.0% |
| !! | CAATAATGCTGGTTCCAGAA+TGG | + | chr1.3:3257418-3257437 | None:intergenic | 40.0% |
| !! | CTCCTTTTGAGAAGAAGCTT+GGG | - | chr1.3:3259554-3259573 | MS.gene26923:intron | 40.0% |
| !! | TCCTTTTGAGAAGAAGCTTG+GGG | - | chr1.3:3259555-3259574 | MS.gene26923:intron | 40.0% |
| !! | TCTTCTTTGAGGTTCTGTTC+CGG | + | chr1.3:3255380-3255399 | None:intergenic | 40.0% |
| !!! | ATTGTGTCGCGTGTTTTGAT+AGG | - | chr1.3:3253871-3253890 | MS.gene26923:CDS | 40.0% |
| !!! | CAGAAGCACTGTGTTTTACA+TGG | - | chr1.3:3258716-3258735 | MS.gene26923:CDS | 40.0% |
| !!! | TTGTGTCGCGTGTTTTGATA+GGG | - | chr1.3:3253872-3253891 | MS.gene26923:CDS | 40.0% |
| AAAGGGAGCTAGCACAGTAA+TGG | - | chr1.3:3255197-3255216 | MS.gene26923:intron | 45.0% | |
| AACTACCCGTCACCTTGATA+TGG | + | chr1.3:3259687-3259706 | None:intergenic | 45.0% | |
| AACTCATACCTGTACCCCAT+CGG | + | chr1.3:3254757-3254776 | None:intergenic | 45.0% | |
| AAGGACCCTTCACCATATCA+AGG | - | chr1.3:3259672-3259691 | MS.gene26923:CDS | 45.0% | |
| AATATAGGGCACACCCATTC+TGG | - | chr1.3:3257401-3257420 | MS.gene26923:intron | 45.0% | |
| ACAAGACCAGCACGAATAAG+TGG | + | chr1.3:3254807-3254826 | None:intergenic | 45.0% | |
| ACAAGTACCCCTGAAGTTGA+CGG | + | chr1.3:3253778-3253797 | None:intergenic | 45.0% | |
| ACCAGAAAGGGGGAAAAAGA+TGG | + | chr1.3:3255055-3255074 | None:intergenic | 45.0% | |
| ACCAGAATGGGGGAAAAAGA+TGG | - | chr1.3:3255979-3255998 | MS.gene26923:CDS | 45.0% | |
| ACGATCTCCTTAGAAACGAG+TGG | + | chr1.3:3255441-3255460 | None:intergenic | 45.0% | |
| AGAAACGAGTGGAATTGTGC+TGG | + | chr1.3:3255430-3255449 | None:intergenic | 45.0% | |
| AGAGCTTCCTTCCATCCTTA+TGG | + | chr1.3:3257635-3257654 | None:intergenic | 45.0% | |
| AGATTGGTAGGTTGCAAGCA+CGG | + | chr1.3:3256631-3256650 | None:intergenic | 45.0% | |
| AGCTATCCCTTCTTTGGATG+CGG | + | chr1.3:3256331-3256350 | None:intergenic | 45.0% | |
| ATAAGACCAGCAGGGTTTGT+TGG | + | chr1.3:3257379-3257398 | None:intergenic | 45.0% | |
| ATTGACAAAAGATGTGGGGG+GGG | - | chr1.3:3256047-3256066 | MS.gene26923:intron | 45.0% | |
| CAAGACCAGCACGAATAAGT+GGG | + | chr1.3:3254806-3254825 | None:intergenic | 45.0% | |
| CAATTCCCACTTATTCGTGC+TGG | - | chr1.3:3254798-3254817 | MS.gene26923:CDS | 45.0% | |
| CACACCAATTATTCAGGACC+AGG | + | chr1.3:3257079-3257098 | None:intergenic | 45.0% | |
| CACTCGCACACCAATTATTC+AGG | + | chr1.3:3257085-3257104 | None:intergenic | 45.0% | |
| CAGAAAGGGGGAAAAAGATG+GGG | + | chr1.3:3255053-3255072 | None:intergenic | 45.0% | |
| CAGAATGGGGGAAAAAGATG+GGG | - | chr1.3:3255981-3256000 | MS.gene26923:CDS | 45.0% | |
| CATGTGAAGGGCAATAATGC+TGG | + | chr1.3:3257429-3257448 | None:intergenic | 45.0% | |
| CCAAGCTTCTTCTCAAAAGG+AGG | + | chr1.3:3259556-3259575 | None:intergenic | 45.0% | |
| CCAGAAAGGGGGAAAAAGAT+GGG | + | chr1.3:3255054-3255073 | None:intergenic | 45.0% | |
| CCAGAATGGGGGAAAAAGAT+GGG | - | chr1.3:3255980-3255999 | MS.gene26923:CDS | 45.0% | |
| CCCATCGGGAAATACTGAAT+TGG | + | chr1.3:3254742-3254761 | None:intergenic | 45.0% | |
| CCTTCACCATATCAAGGTGA+CGG | - | chr1.3:3259678-3259697 | MS.gene26923:CDS | 45.0% | |
| CGAAGAGAGTAGTAGTGTGT+CGG | - | chr1.3:3255533-3255552 | MS.gene26923:intron | 45.0% | |
| CGTCACCTTGATATGGTGAA+GGG | + | chr1.3:3259680-3259699 | None:intergenic | 45.0% | |
| CTAAACCCCATGGATATCAC+GGG | + | chr1.3:3258816-3258835 | None:intergenic | 45.0% | |
| CTAAGTTCCGCATCCAAAGA+AGG | - | chr1.3:3256321-3256340 | MS.gene26923:intron | 45.0% | |
| CTCATGAGATGATGCATGCA+TGG | - | chr1.3:3259171-3259190 | MS.gene26923:intron | 45.0% | |
| CTCATGAGCTAGAATCGATC+CGG | + | chr1.3:3259159-3259178 | None:intergenic | 45.0% | |
| CTCTTTACATGCAGCCACAA+GGG | - | chr1.3:3257595-3257614 | MS.gene26923:intron | 45.0% | |
| CTTCACCATATCAAGGTGAC+GGG | - | chr1.3:3259679-3259698 | MS.gene26923:CDS | 45.0% | |
| GAAAGGGTAATTTCCAGACG+TGG | + | chr1.3:3256785-3256804 | None:intergenic | 45.0% | |
| GACGGGATATATTGCCCATA+AGG | - | chr1.3:3257617-3257636 | MS.gene26923:intron | 45.0% | |
| GAGCTTCCTTCCATCCTTAT+GGG | + | chr1.3:3257634-3257653 | None:intergenic | 45.0% | |
| GCTAAACCCCATGGATATCA+CGG | + | chr1.3:3258817-3258836 | None:intergenic | 45.0% | |
| GGCCGCTATCTAAATTGCTT+GGG | - | chr1.3:3256575-3256594 | MS.gene26923:CDS | 45.0% | |
| GTGATAGGAGAAGGAGGATA+TGG | - | chr1.3:3255651-3255670 | MS.gene26923:CDS | 45.0% | |
| GTGTCTCGATTCTGCTATCA+TGG | - | chr1.3:3257662-3257681 | MS.gene26923:intron | 45.0% | |
| TAAACCCCATGGATATCACG+GGG | + | chr1.3:3258815-3258834 | None:intergenic | 45.0% | |
| TATCATATGCCTGAGACCAG+AGG | - | chr1.3:3258197-3258216 | MS.gene26923:intron | 45.0% | |
| TATGGTGAAGGGTCCTTTCT+AGG | + | chr1.3:3259669-3259688 | None:intergenic | 45.0% | |
| TCAAAACCGCAACACATGCT+TGG | + | chr1.3:3258929-3258948 | None:intergenic | 45.0% | |
| TCCCCAAGCTTCTTCTCAAA+AGG | + | chr1.3:3259559-3259578 | None:intergenic | 45.0% | |
| TCTAACAGTCTGCAACTAGG+AGG | + | chr1.3:3258673-3258692 | None:intergenic | 45.0% | |
| TCTCTTTACATGCAGCCACA+AGG | - | chr1.3:3257594-3257613 | MS.gene26923:intron | 45.0% | |
| TGACAAAAGATAGGGGGGAA+AGG | + | chr1.3:3254985-3255004 | None:intergenic | 45.0% | |
| TGCAGACATCACATTTCGGA+TGG | + | chr1.3:3256834-3256853 | None:intergenic | 45.0% | |
| TGGCCGCTATCTAAATTGCT+TGG | - | chr1.3:3256574-3256593 | MS.gene26923:CDS | 45.0% | |
| TGGTCTCAGGCATATGATAG+TGG | + | chr1.3:3258196-3258215 | None:intergenic | 45.0% | |
| TTACTTGCCGTCAACTTCAG+GGG | - | chr1.3:3253768-3253787 | MS.gene26923:CDS | 45.0% | |
| TTCGCAAGTATGGCCTAGAA+AGG | - | chr1.3:3259653-3259672 | MS.gene26923:CDS | 45.0% | |
| TTGACGGTGATGAATCCTCA+AGG | - | chr1.3:3255484-3255503 | MS.gene26923:intron | 45.0% | |
| TTTGTTTCCGTCCATCCCTT+GGG | - | chr1.3:3259085-3259104 | MS.gene26923:intron | 45.0% | |
| ! | ACTCGTTTCTAAGGAGATCG+TGG | - | chr1.3:3255440-3255459 | MS.gene26923:intron | 45.0% |
| ! | CTGGTGTTGGAAAATGTTGC+AGG | - | chr1.3:3253831-3253850 | MS.gene26923:CDS | 45.0% |
| ! | GGCCTGTTGCCGTTAATTTT+TGG | - | chr1.3:3257329-3257348 | MS.gene26923:intron | 45.0% |
| ! | TATGGAGATGGGTTTAGAGC+CGG | - | chr1.3:3259619-3259638 | MS.gene26923:CDS | 45.0% |
| ! | TCGTGCTATTGCGTTGTCTT+TGG | - | chr1.3:3253942-3253961 | MS.gene26923:CDS | 45.0% |
| ! | TGACAGATGGATTTGCGGAA+GGG | - | chr1.3:3255625-3255644 | MS.gene26923:CDS | 45.0% |
| ! | TTGCCAAGTCAGAAAGTGTG+GGG | - | chr1.3:3256222-3256241 | MS.gene26923:intron | 45.0% |
| ! | TTTGAAACCTGCAATGGAGG+TGG | + | chr1.3:3255265-3255284 | None:intergenic | 45.0% |
| !! | ACAAGCACTGAATGAAGCGA+GGG | - | chr1.3:3257785-3257804 | MS.gene26923:intron | 45.0% |
| !! | CCTCCTTTTGAGAAGAAGCT+TGG | - | chr1.3:3259553-3259572 | MS.gene26923:intron | 45.0% |
| !! | TTTCCCCCTTTCTGGTTTGA+AGG | - | chr1.3:3255059-3255078 | MS.gene26923:intron | 45.0% |
| !!! | CTTGCGAACTGCTTTTTGAC+CGG | + | chr1.3:3259641-3259660 | None:intergenic | 45.0% |
| AAACCCCATGGATATCACGG+GGG | + | chr1.3:3258814-3258833 | None:intergenic | 50.0% | |
| ACTCATACCTGTACCCCATC+GGG | + | chr1.3:3254756-3254775 | None:intergenic | 50.0% | |
| AGAGAGTAGTAGTGTGTCGG+TGG | - | chr1.3:3255536-3255555 | MS.gene26923:intron | 50.0% | |
| AGATGATGCATGCATGGCTG+CGG | - | chr1.3:3259177-3259196 | MS.gene26923:intron | 50.0% | |
| AGGGCTGATGTGATGTACAC+TGG | - | chr1.3:3254882-3254901 | MS.gene26923:CDS | 50.0% | |
| AGTATTTCCCGATGGGGTAC+AGG | - | chr1.3:3254746-3254765 | MS.gene26923:intron | 50.0% | |
| CAACCCCACACTTTCTGACT+TGG | + | chr1.3:3256228-3256247 | None:intergenic | 50.0% | |
| CAGATTCCAACAAACCCTGC+TGG | - | chr1.3:3257370-3257389 | MS.gene26923:intron | 50.0% | |
| CCGTCACCTTGATATGGTGA+AGG | + | chr1.3:3259681-3259700 | None:intergenic | 50.0% | |
| CCTGCAATTGGAGGGAGAAT+GGG | - | chr1.3:3257199-3257218 | MS.gene26923:intron | 50.0% | |
| CTACTGCCAAGCATGTGTTG+CGG | - | chr1.3:3258920-3258939 | MS.gene26923:intron | 50.0% | |
| CTATTTCCTGTGCCGAGTCT+AGG | + | chr1.3:3258516-3258535 | None:intergenic | 50.0% | |
| CTGTTGTAGCTGTGAGCGAA+TGG | - | chr1.3:3257468-3257487 | MS.gene26923:intron | 50.0% | |
| GAAGGGAACGTGATAGGAGA+AGG | - | chr1.3:3255642-3255661 | MS.gene26923:CDS | 50.0% | |
| GCAATATATCCCGTCCCTTG+TGG | + | chr1.3:3257612-3257631 | None:intergenic | 50.0% | |
| GCAATGGAGGTGGTTAGCAA+CGG | + | chr1.3:3255255-3255274 | None:intergenic | 50.0% | |
| GCTCCCATAAGACCGTAATC+TGG | + | chr1.3:3256981-3257000 | None:intergenic | 50.0% | |
| GCTGATGAAAAGTTGCTGCC+TGG | + | chr1.3:3259490-3259509 | None:intergenic | 50.0% | |
| GCTGGCTGCAATACTGAGAT+TGG | - | chr1.3:3256548-3256567 | MS.gene26923:CDS | 50.0% | |
| GGGGGTCTTCAAACCAGAAT+GGG | - | chr1.3:3255967-3255986 | MS.gene26923:CDS | 50.0% | |
| GGGGTACAGGTATGAGTTAG+AGG | - | chr1.3:3254759-3254778 | MS.gene26923:intron | 50.0% | |
| GGGGTCTTCAAACCAGAATG+GGG | - | chr1.3:3255968-3255987 | MS.gene26923:CDS | 50.0% | |
| GGGTCGGTGGTATAGTTTGA+AGG | - | chr1.3:3255590-3255609 | MS.gene26923:CDS | 50.0% | |
| GGGTCTAACAGTCTGCAACT+AGG | + | chr1.3:3258676-3258695 | None:intergenic | 50.0% | |
| GGGTCTTCAAACCAGAATGG+GGG | - | chr1.3:3255969-3255988 | MS.gene26923:CDS | 50.0% | |
| GGTGATGCGAATGCAGAGAA+CGG | + | chr1.3:3255343-3255362 | None:intergenic | 50.0% | |
| TCTGAGCTTTCTTCTGCACC+AGG | - | chr1.3:3259469-3259488 | MS.gene26923:CDS | 50.0% | |
| TGATGCAAAGGACAGGACCA+AGG | + | chr1.3:3255803-3255822 | None:intergenic | 50.0% | |
| TGATTCTCCCAAGGGATGGA+CGG | + | chr1.3:3259095-3259114 | None:intergenic | 50.0% | |
| TGGGGGTCTTCAAACCAGAA+TGG | - | chr1.3:3255966-3255985 | MS.gene26923:CDS | 50.0% | |
| TGGTCCTGTCCTTTGCATCA+CGG | - | chr1.3:3255803-3255822 | MS.gene26923:intron | 50.0% | |
| TTACATGCAGCCACAAGGGA+CGG | - | chr1.3:3257599-3257618 | MS.gene26923:intron | 50.0% | |
| TTCGCTCACAGCTACAACAG+CGG | + | chr1.3:3257468-3257487 | None:intergenic | 50.0% | |
| TTGACAAAAGATGTGGGGGG+GGG | - | chr1.3:3256048-3256067 | MS.gene26923:intron | 50.0% | |
| TTGCTAACCACCTCCATTGC+AGG | - | chr1.3:3255255-3255274 | MS.gene26923:intron | 50.0% | |
| TTGGAGTCACCTCCCAAACA+TGG | - | chr1.3:3254697-3254716 | MS.gene26923:intron | 50.0% | |
| TTGTAGCTGTGAGCGAATGG+AGG | - | chr1.3:3257471-3257490 | MS.gene26923:intron | 50.0% | |
| TTTGCGGAAGGGAACGTGAT+AGG | - | chr1.3:3255636-3255655 | MS.gene26923:CDS | 50.0% | |
| ! | CCCATCTTTTTCCCCCATTC+TGG | + | chr1.3:3255983-3256002 | None:intergenic | 50.0% |
| ! | CCCATCTTTTTCCCCCTTTC+TGG | - | chr1.3:3255051-3255070 | MS.gene26923:intron | 50.0% |
| ! | CGTTTCTAAGGAGATCGTGG+AGG | - | chr1.3:3255443-3255462 | MS.gene26923:intron | 50.0% |
| ! | CTTTGTTTCCGTCCATCCCT+TGG | - | chr1.3:3259084-3259103 | MS.gene26923:intron | 50.0% |
| ! | GTGACAGATGGATTTGCGGA+AGG | - | chr1.3:3255624-3255643 | MS.gene26923:CDS | 50.0% |
| !! | GACAAGCACTGAATGAAGCG+AGG | - | chr1.3:3257784-3257803 | MS.gene26923:intron | 50.0% |
| !!! | GGTTTTGGCTCACATGTGGT+TGG | - | chr1.3:3259444-3259463 | MS.gene26923:CDS | 50.0% |
| !!! | GTCAGGTTTTGGCTCACATG+TGG | - | chr1.3:3259440-3259459 | MS.gene26923:CDS | 50.0% |
| ACCAAGGAAGCTGCAGAGAG+GGG | + | chr1.3:3255787-3255806 | None:intergenic | 55.0% | |
| ACTGAATGAAGCGAGGGAGG+GGG | - | chr1.3:3257791-3257810 | MS.gene26923:intron | 55.0% | |
| AGAAGACCTAGACTCGGCAC+AGG | - | chr1.3:3258507-3258526 | MS.gene26923:intron | 55.0% | |
| CACTGAATGAAGCGAGGGAG+GGG | - | chr1.3:3257790-3257809 | MS.gene26923:intron | 55.0% | |
| CAGCGCGCAGTCAGTTTGTA+TGG | + | chr1.3:3258555-3258574 | None:intergenic | 55.0% | |
| CCCATTCTCCCTCCAATTGC+AGG | + | chr1.3:3257202-3257221 | None:intergenic | 55.0% | |
| CTTCCCCCGTGATATCCATG+GGG | - | chr1.3:3258808-3258827 | MS.gene26923:intron | 55.0% | |
| GACCAAGGAAGCTGCAGAGA+GGG | + | chr1.3:3255788-3255807 | None:intergenic | 55.0% | |
| GCACTGAATGAAGCGAGGGA+GGG | - | chr1.3:3257789-3257808 | MS.gene26923:intron | 55.0% | |
| GCCTGCAATTGGAGGGAGAA+TGG | - | chr1.3:3257198-3257217 | MS.gene26923:intron | 55.0% | |
| GCTTCCCCCGTGATATCCAT+GGG | - | chr1.3:3258807-3258826 | MS.gene26923:intron | 55.0% | |
| GGGAACGTGATAGGAGAAGG+AGG | - | chr1.3:3255645-3255664 | MS.gene26923:CDS | 55.0% | |
| GGGCCTTCAAACCAGAAAGG+GGG | + | chr1.3:3255065-3255084 | None:intergenic | 55.0% | |
| GGGGCCTTCAAACCAGAAAG+GGG | + | chr1.3:3255066-3255085 | None:intergenic | 55.0% | |
| GGGGGCCTTCAAACCAGAAA+GGG | + | chr1.3:3255067-3255086 | None:intergenic | 55.0% | |
| GTAGGTTGCAAGCACGGCAA+CGG | + | chr1.3:3256625-3256644 | None:intergenic | 55.0% | |
| GTTCCGGCGAATGCAGAGAA+CGG | + | chr1.3:3255364-3255383 | None:intergenic | 55.0% | |
| TACATGCAGCCACAAGGGAC+GGG | - | chr1.3:3257600-3257619 | MS.gene26923:intron | 55.0% | |
| TCACCGTTCTCTGCATTCGC+CGG | - | chr1.3:3255337-3255356 | MS.gene26923:intron | 55.0% | |
| TCCTGTCCTTTGCATCACGG+CGG | - | chr1.3:3255806-3255825 | MS.gene26923:intron | 55.0% | |
| TCGCTCACAGCTACAACAGC+GGG | + | chr1.3:3257467-3257486 | None:intergenic | 55.0% | |
| TGACAAAAGATGTGGGGGGG+GGG | - | chr1.3:3256049-3256068 | MS.gene26923:intron | 55.0% | |
| TGCTTCCCCCGTGATATCCA+TGG | - | chr1.3:3258806-3258825 | MS.gene26923:intron | 55.0% | |
| TGGGGGCCTTCAAACCAGAA+AGG | + | chr1.3:3255068-3255087 | None:intergenic | 55.0% | |
| ! | AGCACTGAATGAAGCGAGGG+AGG | - | chr1.3:3257788-3257807 | MS.gene26923:intron | 55.0% |
| ! | CAGTGCTGAGTTCCTCTGAG+AGG | + | chr1.3:3258229-3258248 | None:intergenic | 55.0% |
| AACACCGCCGGAGGAATTGG+CGG | + | chr1.3:3255229-3255248 | None:intergenic | 60.0% | |
| ACAAAAGATGTGGGGGGGGG+GGG | - | chr1.3:3256051-3256070 | MS.gene26923:intron | 60.0% | |
| ACAGCTCCGCCGTGATGCAA+AGG | + | chr1.3:3255815-3255834 | None:intergenic | 60.0% | |
| AGGCAGAGTCCTCTGGTCTC+AGG | + | chr1.3:3258209-3258228 | None:intergenic | 60.0% | |
| CACAACACCGCCGGAGGAAT+TGG | + | chr1.3:3255232-3255251 | None:intergenic | 60.0% | |
| CAGAGGACTCTGCCTCTCAG+AGG | - | chr1.3:3258214-3258233 | MS.gene26923:intron | 60.0% | |
| CATGCATGGCTGCGGCTAAC+AGG | - | chr1.3:3259185-3259204 | MS.gene26923:intron | 60.0% | |
| GACAAAAGATGTGGGGGGGG+GGG | - | chr1.3:3256050-3256069 | MS.gene26923:intron | 60.0% | |
| GCACCTTCCGCCAATTCCTC+CGG | - | chr1.3:3255219-3255238 | MS.gene26923:intron | 60.0% | |
| GGACCAAGGAAGCTGCAGAG+AGG | + | chr1.3:3255789-3255808 | None:intergenic | 60.0% | |
| TAGCAACGGCACAACACCGC+CGG | + | chr1.3:3255241-3255260 | None:intergenic | 60.0% | |
| TCCCCTCTCTGCAGCTTCCT+TGG | - | chr1.3:3255783-3255802 | MS.gene26923:intron | 60.0% | |
| TCCGCCGTGATGCAAAGGAC+AGG | + | chr1.3:3255810-3255829 | None:intergenic | 60.0% | |
| ! | CTCTGAGAGGCAGAGTCCTC+TGG | + | chr1.3:3258216-3258235 | None:intergenic | 60.0% |
| !! | GCACGGCAACGGAAGCATTC+AGG | + | chr1.3:3256614-3256633 | None:intergenic | 60.0% |
| AAAAGATGTGGGGGGGGGGG+GGG | - | chr1.3:3256053-3256072 | MS.gene26923:intron | 65.0% | |
| CAAAAGATGTGGGGGGGGGG+GGG | - | chr1.3:3256052-3256071 | MS.gene26923:intron | 65.0% | |
| CACCCTATGTTCGCCGACGG+CGG | + | chr1.3:3255570-3255589 | None:intergenic | 65.0% | |
| CCCCACCCTATGTTCGCCGA+CGG | + | chr1.3:3255573-3255592 | None:intergenic | 65.0% | |
| CCGTCGGCGAACATAGGGTG+GGG | - | chr1.3:3255570-3255589 | MS.gene26923:intron | 65.0% | |
| CCTTCCGCCAATTCCTCCGG+CGG | - | chr1.3:3255222-3255241 | MS.gene26923:intron | 65.0% | |
| CGAACATAGGGTGGGGTCGG+TGG | - | chr1.3:3255577-3255596 | MS.gene26923:intron | 65.0% | |
| CGGCGAACATAGGGTGGGGT+CGG | - | chr1.3:3255574-3255593 | MS.gene26923:intron | 65.0% | |
| GCCGTCGGCGAACATAGGGT+GGG | - | chr1.3:3255569-3255588 | MS.gene26923:intron | 65.0% | |
| AAAGATGTGGGGGGGGGGGG+GGG | - | chr1.3:3256054-3256073 | MS.gene26923:intron | 70.0% | |
| CAACGGCACAACACCGCCGG+AGG | + | chr1.3:3255238-3255257 | None:intergenic | 70.0% | |
| CCGCCGGAGGAATTGGCGGA+AGG | + | chr1.3:3255225-3255244 | None:intergenic | 70.0% | |
| CCTATGTTCGCCGACGGCGG+CGG | + | chr1.3:3255567-3255586 | None:intergenic | 70.0% | |
| CGCCGCCGTCGGCGAACATA+GGG | - | chr1.3:3255565-3255584 | MS.gene26923:intron | 70.0% | |
| CGCCGTCGGCGAACATAGGG+TGG | - | chr1.3:3255568-3255587 | MS.gene26923:intron | 70.0% | |
| AAGATGTGGGGGGGGGGGGG+GGG | - | chr1.3:3256055-3256074 | MS.gene26923:intron | 75.0% | |
| CCGCCGCCGTCGGCGAACAT+AGG | - | chr1.3:3255564-3255583 | MS.gene26923:intron | 75.0% | |
| GGTGGAGTCACCGCCGCCGT+CGG | - | chr1.3:3255554-3255573 | MS.gene26923:intron | 75.0% | |
| ! | AGATGTGGGGGGGGGGGGGG+GGG | - | chr1.3:3256056-3256075 | MS.gene26923:intron | 80.0% |
| ! | ATGTGGGGGGGGGGGGGGGG+GGG | - | chr1.3:3256058-3256077 | MS.gene26923:intron | 85.0% |
| ! | GATGTGGGGGGGGGGGGGGG+GGG | - | chr1.3:3256057-3256076 | MS.gene26923:intron | 85.0% |
| ! | TGTGGGGGGGGGGGGGGGGG+GGG | - | chr1.3:3256059-3256078 | MS.gene26923:intron | 90.0% |
| ! | GGGGGGGGGGGGGGGGGGGA+GGG | - | chr1.3:3256069-3256088 | MS.gene26923:intron | 95.0% |
| ! | GTGGGGGGGGGGGGGGGGGG+GGG | - | chr1.3:3256060-3256079 | MS.gene26923:intron | 95.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | - | chr1.3:3256061-3256080 | MS.gene26923:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 3253688 | 3259717 | 3253688 | ID=MS.gene26923 |
| chr1.3 | mRNA | 3253688 | 3259717 | 3253688 | ID=MS.gene26923.t1;Parent=MS.gene26923 |
| chr1.3 | exon | 3259616 | 3259717 | 3259616 | ID=MS.gene26923.t1.exon1;Parent=MS.gene26923.t1 |
| chr1.3 | CDS | 3259616 | 3259717 | 3259616 | ID=cds.MS.gene26923.t1;Parent=MS.gene26923.t1 |
| chr1.3 | exon | 3259408 | 3259498 | 3259408 | ID=MS.gene26923.t1.exon2;Parent=MS.gene26923.t1 |
| chr1.3 | CDS | 3259408 | 3259498 | 3259408 | ID=cds.MS.gene26923.t1;Parent=MS.gene26923.t1 |
| chr1.3 | exon | 3258638 | 3258770 | 3258638 | ID=MS.gene26923.t1.exon3;Parent=MS.gene26923.t1 |
| chr1.3 | CDS | 3258638 | 3258770 | 3258638 | ID=cds.MS.gene26923.t1;Parent=MS.gene26923.t1 |
| chr1.3 | exon | 3256744 | 3256864 | 3256744 | ID=MS.gene26923.t1.exon4;Parent=MS.gene26923.t1 |
| chr1.3 | CDS | 3256744 | 3256864 | 3256744 | ID=cds.MS.gene26923.t1;Parent=MS.gene26923.t1 |
| chr1.3 | exon | 3256544 | 3256627 | 3256544 | ID=MS.gene26923.t1.exon5;Parent=MS.gene26923.t1 |
| chr1.3 | CDS | 3256544 | 3256627 | 3256544 | ID=cds.MS.gene26923.t1;Parent=MS.gene26923.t1 |
| chr1.3 | exon | 3255913 | 3256032 | 3255913 | ID=MS.gene26923.t1.exon6;Parent=MS.gene26923.t1 |
| chr1.3 | CDS | 3255913 | 3256032 | 3255913 | ID=cds.MS.gene26923.t1;Parent=MS.gene26923.t1 |
| chr1.3 | exon | 3255584 | 3255796 | 3255584 | ID=MS.gene26923.t1.exon7;Parent=MS.gene26923.t1 |
| chr1.3 | CDS | 3255584 | 3255796 | 3255584 | ID=cds.MS.gene26923.t1;Parent=MS.gene26923.t1 |
| chr1.3 | exon | 3255158 | 3255214 | 3255158 | ID=MS.gene26923.t1.exon8;Parent=MS.gene26923.t1 |
| chr1.3 | CDS | 3255158 | 3255214 | 3255158 | ID=cds.MS.gene26923.t1;Parent=MS.gene26923.t1 |
| chr1.3 | exon | 3254792 | 3254904 | 3254792 | ID=MS.gene26923.t1.exon9;Parent=MS.gene26923.t1 |
| chr1.3 | CDS | 3254792 | 3254904 | 3254792 | ID=cds.MS.gene26923.t1;Parent=MS.gene26923.t1 |
| chr1.3 | exon | 3254199 | 3254257 | 3254199 | ID=MS.gene26923.t1.exon10;Parent=MS.gene26923.t1 |
| chr1.3 | CDS | 3254199 | 3254257 | 3254199 | ID=cds.MS.gene26923.t1;Parent=MS.gene26923.t1 |
| chr1.3 | exon | 3253688 | 3254004 | 3253688 | ID=MS.gene26923.t1.exon11;Parent=MS.gene26923.t1 |
| chr1.3 | CDS | 3253688 | 3254004 | 3253688 | ID=cds.MS.gene26923.t1;Parent=MS.gene26923.t1 |
| Gene Sequence |
| Protein sequence |
