Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27551.t1 | XP_003623706.2 | 92.1 | 328 | 26 | 0 | 1 | 328 | 38 | 365 | 7.90E-176 | 626.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27551.t1 | Q40316 | 68.0 | 328 | 103 | 1 | 1 | 328 | 1 | 326 | 1.7e-131 | 470.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27551.t1 | G7KZA8 | 92.1 | 328 | 26 | 0 | 1 | 328 | 1 | 328 | 5.7e-176 | 626.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene27551 | MS.gene56554 | PPI |
| MS.gene27551 | MS.gene006771 | PPI |
| MS.gene071401 | MS.gene27551 | PPI |
| MS.gene27551 | MS.gene40154 | PPI |
| MS.gene27551 | MS.gene028567 | PPI |
| MS.gene27551 | MS.gene96808 | PPI |
| MS.gene27551 | MS.gene031525 | PPI |
| MS.gene27551 | MS.gene40148 | PPI |
| MS.gene27551 | MS.gene071398 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27551.t1 | MTR_7g074730 | 92.073 | 328 | 26 | 0 | 1 | 328 | 1 | 328 | 0.0 | 634 |
| MS.gene27551.t1 | MTR_7g074820 | 86.322 | 329 | 44 | 1 | 1 | 328 | 1 | 329 | 0.0 | 589 |
| MS.gene27551.t1 | MTR_7g074850 | 85.714 | 329 | 46 | 1 | 1 | 328 | 1 | 329 | 0.0 | 587 |
| MS.gene27551.t1 | MTR_7g074880 | 78.354 | 328 | 69 | 1 | 1 | 328 | 1 | 326 | 0.0 | 550 |
| MS.gene27551.t1 | MTR_7g074710 | 67.683 | 328 | 104 | 1 | 1 | 328 | 1 | 326 | 2.52e-170 | 476 |
| MS.gene27551.t1 | MTR_7g074870 | 74.913 | 287 | 70 | 1 | 42 | 328 | 4 | 288 | 4.74e-161 | 451 |
| MS.gene27551.t1 | MTR_4g023730 | 50.606 | 330 | 160 | 3 | 1 | 328 | 1 | 329 | 1.61e-110 | 325 |
| MS.gene27551.t1 | MTR_1g022440 | 45.483 | 321 | 172 | 3 | 8 | 328 | 8 | 325 | 4.99e-99 | 296 |
| MS.gene27551.t1 | MTR_1g022445 | 44.785 | 326 | 167 | 4 | 8 | 328 | 8 | 325 | 4.75e-94 | 283 |
| MS.gene27551.t1 | MTR_4g092080 | 39.820 | 334 | 189 | 5 | 1 | 326 | 7 | 336 | 3.55e-79 | 245 |
| MS.gene27551.t1 | MTR_4g081440 | 36.471 | 340 | 192 | 7 | 6 | 328 | 22 | 354 | 9.26e-72 | 226 |
| MS.gene27551.t1 | MTR_4g081440 | 36.471 | 340 | 191 | 8 | 6 | 328 | 18 | 349 | 3.04e-70 | 222 |
| MS.gene27551.t1 | MTR_2g101330 | 37.615 | 327 | 188 | 9 | 7 | 328 | 4 | 319 | 6.79e-66 | 211 |
| MS.gene27551.t1 | MTR_5g056600 | 35.185 | 324 | 197 | 8 | 9 | 328 | 5 | 319 | 3.37e-61 | 198 |
| MS.gene27551.t1 | MTR_8g062110 | 36.061 | 330 | 194 | 8 | 1 | 325 | 2 | 319 | 4.83e-60 | 195 |
| MS.gene27551.t1 | MTR_8g062110 | 35.758 | 330 | 195 | 7 | 1 | 325 | 11 | 328 | 6.54e-60 | 195 |
| MS.gene27551.t1 | MTR_8g062110 | 37.370 | 289 | 169 | 5 | 1 | 286 | 2 | 281 | 2.32e-58 | 190 |
| MS.gene27551.t1 | MTR_8g062110 | 37.722 | 281 | 164 | 4 | 1 | 278 | 2 | 274 | 2.52e-58 | 189 |
| MS.gene27551.t1 | MTR_8g062440 | 35.736 | 333 | 198 | 7 | 1 | 328 | 1 | 322 | 3.57e-58 | 190 |
| MS.gene27551.t1 | MTR_3g005210 | 34.049 | 326 | 199 | 7 | 8 | 328 | 6 | 320 | 1.02e-57 | 189 |
| MS.gene27551.t1 | MTR_2g013230 | 34.943 | 352 | 193 | 9 | 1 | 328 | 1 | 340 | 1.14e-57 | 190 |
| MS.gene27551.t1 | MTR_8g062440 | 35.736 | 333 | 197 | 8 | 1 | 328 | 1 | 321 | 2.20e-57 | 188 |
| MS.gene27551.t1 | MTR_8g062440 | 38.434 | 281 | 162 | 5 | 1 | 278 | 1 | 273 | 1.09e-55 | 184 |
| MS.gene27551.t1 | MTR_4g077130 | 36.749 | 283 | 168 | 8 | 1 | 279 | 1 | 276 | 1.36e-53 | 179 |
| MS.gene27551.t1 | MTR_3g005170 | 32.615 | 325 | 203 | 8 | 8 | 327 | 10 | 323 | 3.36e-53 | 177 |
| MS.gene27551.t1 | MTR_2g013250 | 34.006 | 347 | 195 | 8 | 3 | 326 | 2 | 337 | 4.14e-53 | 178 |
| MS.gene27551.t1 | MTR_3g005170 | 34.909 | 275 | 169 | 5 | 8 | 279 | 10 | 277 | 6.29e-53 | 176 |
| MS.gene27551.t1 | MTR_3g031650 | 34.743 | 331 | 190 | 11 | 8 | 328 | 5 | 319 | 6.86e-53 | 177 |
| MS.gene27551.t1 | MTR_5g072620 | 34.650 | 329 | 193 | 9 | 8 | 328 | 5 | 319 | 1.26e-50 | 171 |
| MS.gene27551.t1 | MTR_2g104960 | 36.000 | 325 | 189 | 13 | 8 | 328 | 20 | 329 | 3.27e-50 | 170 |
| MS.gene27551.t1 | MTR_2g013260 | 35.429 | 350 | 190 | 11 | 1 | 326 | 1 | 338 | 6.20e-50 | 170 |
| MS.gene27551.t1 | MTR_4g077100 | 33.451 | 284 | 176 | 6 | 1 | 279 | 3 | 278 | 1.36e-47 | 162 |
| MS.gene27551.t1 | MTR_4g077100 | 33.803 | 284 | 175 | 7 | 1 | 279 | 3 | 278 | 4.34e-47 | 162 |
| MS.gene27551.t1 | MTR_3g031650 | 34.783 | 276 | 166 | 7 | 8 | 278 | 5 | 271 | 1.27e-46 | 159 |
| MS.gene27551.t1 | MTR_7g117190 | 33.046 | 348 | 202 | 10 | 3 | 328 | 2 | 340 | 4.46e-46 | 159 |
| MS.gene27551.t1 | MTR_2g013260 | 36.213 | 301 | 161 | 8 | 1 | 278 | 1 | 293 | 1.03e-45 | 157 |
| MS.gene27551.t1 | MTR_4g009040 | 33.231 | 325 | 201 | 9 | 7 | 328 | 12 | 323 | 1.30e-45 | 158 |
| MS.gene27551.t1 | MTR_4g006940 | 32.923 | 325 | 199 | 12 | 8 | 328 | 17 | 326 | 2.48e-45 | 157 |
| MS.gene27551.t1 | MTR_4g009040 | 32.727 | 330 | 200 | 10 | 7 | 328 | 12 | 327 | 1.08e-44 | 155 |
| MS.gene27551.t1 | MTR_4g006940 | 34.545 | 275 | 166 | 8 | 8 | 280 | 17 | 279 | 5.95e-43 | 149 |
| MS.gene27551.t1 | MTR_4g006940 | 34.545 | 275 | 166 | 8 | 8 | 280 | 17 | 279 | 5.95e-43 | 149 |
| MS.gene27551.t1 | MTR_2g028620 | 32.565 | 347 | 190 | 14 | 2 | 328 | 4 | 326 | 9.83e-43 | 150 |
| MS.gene27551.t1 | MTR_7g117190 | 34.343 | 297 | 169 | 8 | 3 | 278 | 2 | 293 | 9.27e-42 | 147 |
| MS.gene27551.t1 | MTR_4g009690 | 32.000 | 325 | 205 | 9 | 7 | 328 | 12 | 323 | 2.42e-40 | 144 |
| MS.gene27551.t1 | MTR_2g028620 | 34.386 | 285 | 169 | 9 | 2 | 278 | 4 | 278 | 3.00e-40 | 144 |
| MS.gene27551.t1 | MTR_4g009690 | 32.000 | 325 | 204 | 9 | 7 | 328 | 12 | 322 | 3.64e-40 | 144 |
| MS.gene27551.t1 | MTR_3g005170 | 29.231 | 325 | 183 | 9 | 8 | 327 | 10 | 292 | 5.98e-38 | 137 |
| MS.gene27551.t1 | MTR_2g013230 | 31.225 | 253 | 139 | 8 | 100 | 328 | 9 | 250 | 4.03e-26 | 104 |
| MS.gene27551.t1 | MTR_8g062110 | 32.301 | 226 | 137 | 7 | 105 | 325 | 19 | 233 | 5.76e-26 | 103 |
| MS.gene27551.t1 | MTR_0164s0070 | 38.281 | 128 | 77 | 2 | 7 | 133 | 4 | 130 | 9.94e-26 | 102 |
| MS.gene27551.t1 | MTR_5g029990 | 27.178 | 287 | 163 | 10 | 8 | 275 | 12 | 271 | 2.97e-24 | 100 |
| MS.gene27551.t1 | MTR_8g062110 | 33.898 | 177 | 107 | 3 | 105 | 278 | 19 | 188 | 4.25e-24 | 97.8 |
| MS.gene27551.t1 | MTR_6g406250 | 27.509 | 269 | 165 | 11 | 2 | 255 | 47 | 300 | 1.11e-22 | 97.4 |
| MS.gene27551.t1 | MTR_6g406250 | 27.826 | 230 | 136 | 8 | 2 | 216 | 47 | 261 | 3.10e-20 | 89.0 |
| MS.gene27551.t1 | MTR_7g074865 | 81.395 | 43 | 8 | 0 | 1 | 43 | 1 | 43 | 8.64e-20 | 82.4 |
| MS.gene27551.t1 | MTR_7g117190 | 30.508 | 236 | 134 | 9 | 115 | 328 | 3 | 230 | 5.98e-19 | 84.7 |
| MS.gene27551.t1 | MTR_2g013260 | 31.873 | 251 | 136 | 10 | 100 | 326 | 28 | 267 | 1.35e-18 | 84.7 |
| MS.gene27551.t1 | MTR_3g101500 | 25.263 | 285 | 174 | 10 | 7 | 279 | 3 | 260 | 8.62e-13 | 68.6 |
| MS.gene27551.t1 | MTR_3g101500 | 25.197 | 254 | 157 | 8 | 7 | 253 | 3 | 230 | 1.10e-12 | 67.8 |
| MS.gene27551.t1 | MTR_3g101500 | 27.225 | 191 | 119 | 6 | 7 | 197 | 3 | 173 | 1.99e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27551.t1 | AT2G45400 | 52.108 | 332 | 151 | 5 | 3 | 328 | 35 | 364 | 1.06e-112 | 331 |
| MS.gene27551.t1 | AT2G45400 | 52.817 | 284 | 127 | 4 | 3 | 280 | 35 | 317 | 2.86e-99 | 296 |
| MS.gene27551.t1 | AT5G42800 | 45.994 | 337 | 161 | 5 | 1 | 328 | 1 | 325 | 2.51e-97 | 293 |
| MS.gene27551.t1 | AT2G45400 | 51.877 | 293 | 134 | 4 | 41 | 328 | 17 | 307 | 1.47e-94 | 283 |
| MS.gene27551.t1 | AT4G35420 | 39.275 | 331 | 188 | 8 | 1 | 328 | 1 | 321 | 1.09e-79 | 246 |
| MS.gene27551.t1 | AT2G45400 | 54.545 | 220 | 94 | 3 | 3 | 216 | 35 | 254 | 5.91e-78 | 239 |
| MS.gene27551.t1 | AT1G61720 | 40.000 | 330 | 186 | 6 | 7 | 328 | 12 | 337 | 2.60e-75 | 235 |
| MS.gene27551.t1 | AT1G68540 | 37.037 | 324 | 191 | 8 | 10 | 328 | 6 | 321 | 7.11e-61 | 197 |
| MS.gene27551.t1 | AT2G02400 | 37.425 | 334 | 181 | 13 | 5 | 328 | 3 | 318 | 1.63e-58 | 191 |
| MS.gene27551.t1 | AT1G09480 | 36.420 | 324 | 194 | 7 | 8 | 328 | 8 | 322 | 8.44e-58 | 189 |
| MS.gene27551.t1 | AT1G09480 | 37.294 | 303 | 179 | 6 | 8 | 307 | 55 | 349 | 1.61e-57 | 190 |
| MS.gene27551.t1 | AT1G51410 | 33.131 | 329 | 208 | 7 | 3 | 328 | 4 | 323 | 6.51e-57 | 187 |
| MS.gene27551.t1 | AT5G58490 | 35.484 | 341 | 188 | 10 | 1 | 328 | 2 | 323 | 2.37e-56 | 186 |
| MS.gene27551.t1 | AT4G27250 | 31.250 | 336 | 210 | 4 | 2 | 320 | 7 | 338 | 2.40e-56 | 187 |
| MS.gene27551.t1 | AT1G09490 | 37.276 | 279 | 165 | 5 | 8 | 283 | 8 | 279 | 2.99e-56 | 185 |
| MS.gene27551.t1 | AT4G27250 | 31.515 | 330 | 207 | 4 | 2 | 320 | 7 | 328 | 3.70e-56 | 186 |
| MS.gene27551.t1 | AT1G09510 | 37.072 | 321 | 190 | 8 | 8 | 325 | 8 | 319 | 2.08e-55 | 183 |
| MS.gene27551.t1 | AT1G25460 | 35.294 | 323 | 196 | 7 | 10 | 328 | 6 | 319 | 2.94e-55 | 183 |
| MS.gene27551.t1 | AT5G19440 | 34.769 | 325 | 196 | 8 | 8 | 327 | 10 | 323 | 7.35e-55 | 182 |
| MS.gene27551.t1 | AT1G66800 | 36.957 | 276 | 166 | 5 | 1 | 276 | 1 | 268 | 2.66e-53 | 177 |
| MS.gene27551.t1 | AT1G76470 | 36.593 | 317 | 192 | 6 | 5 | 319 | 4 | 313 | 4.83e-53 | 177 |
| MS.gene27551.t1 | AT1G15950 | 36.391 | 327 | 185 | 14 | 8 | 328 | 13 | 322 | 7.22e-51 | 172 |
| MS.gene27551.t1 | AT1G15950 | 36.391 | 327 | 185 | 14 | 8 | 328 | 13 | 322 | 7.22e-51 | 172 |
| MS.gene27551.t1 | AT1G09500 | 35.273 | 275 | 167 | 5 | 8 | 278 | 8 | 275 | 6.82e-50 | 167 |
| MS.gene27551.t1 | AT1G09500 | 35.357 | 280 | 170 | 6 | 8 | 283 | 8 | 280 | 1.08e-49 | 169 |
| MS.gene27551.t1 | AT1G15950 | 36.102 | 313 | 182 | 10 | 8 | 316 | 13 | 311 | 7.57e-49 | 167 |
| MS.gene27551.t1 | AT1G15950 | 38.628 | 277 | 152 | 10 | 8 | 280 | 13 | 275 | 2.28e-47 | 161 |
| MS.gene27551.t1 | AT1G15950 | 38.489 | 278 | 153 | 10 | 8 | 281 | 13 | 276 | 2.58e-47 | 161 |
| MS.gene27551.t1 | AT1G15950 | 38.489 | 278 | 153 | 10 | 8 | 281 | 13 | 276 | 4.55e-47 | 160 |
| MS.gene27551.t1 | AT1G80820 | 34.862 | 327 | 190 | 14 | 8 | 328 | 8 | 317 | 1.58e-45 | 158 |
| MS.gene27551.t1 | AT2G33590 | 32.817 | 323 | 194 | 10 | 5 | 320 | 6 | 312 | 1.97e-45 | 157 |
| MS.gene27551.t1 | AT2G33600 | 35.625 | 320 | 191 | 11 | 4 | 320 | 5 | 312 | 6.27e-44 | 153 |
| MS.gene27551.t1 | AT1G80820 | 36.462 | 277 | 158 | 10 | 8 | 280 | 8 | 270 | 2.14e-42 | 148 |
| MS.gene27551.t1 | AT1G09490 | 33.730 | 252 | 158 | 4 | 35 | 283 | 3 | 248 | 7.25e-41 | 144 |
| MS.gene27551.t1 | AT1G09500 | 32.129 | 249 | 159 | 5 | 39 | 283 | 4 | 246 | 5.63e-35 | 129 |
| MS.gene27551.t1 | AT1G68540 | 34.389 | 221 | 134 | 6 | 112 | 328 | 1 | 214 | 2.29e-31 | 117 |
| MS.gene27551.t1 | AT2G23910 | 26.645 | 304 | 204 | 9 | 9 | 305 | 11 | 302 | 9.35e-29 | 113 |
| MS.gene27551.t1 | AT2G23910 | 26.224 | 286 | 194 | 8 | 1 | 281 | 1 | 274 | 1.70e-26 | 106 |
| MS.gene27551.t1 | AT2G23910 | 26.056 | 284 | 193 | 8 | 1 | 279 | 1 | 272 | 2.77e-26 | 105 |
| MS.gene27551.t1 | AT4G30470 | 25.987 | 304 | 203 | 9 | 9 | 304 | 11 | 300 | 1.13e-24 | 102 |
| MS.gene27551.t1 | AT1G15950 | 32.609 | 230 | 138 | 10 | 105 | 328 | 6 | 224 | 2.62e-22 | 94.4 |
| MS.gene27551.t1 | AT5G14700 | 28.364 | 275 | 162 | 10 | 8 | 263 | 55 | 313 | 1.29e-21 | 94.4 |
| MS.gene27551.t1 | AT5G14700 | 28.641 | 206 | 120 | 7 | 8 | 197 | 55 | 249 | 1.10e-18 | 85.1 |
| MS.gene27551.t1 | AT2G23910 | 25.000 | 264 | 180 | 8 | 49 | 305 | 16 | 268 | 1.20e-18 | 84.7 |
| MS.gene27551.t1 | AT4G33360 | 27.083 | 288 | 175 | 10 | 2 | 279 | 9 | 271 | 2.97e-18 | 84.0 |
| MS.gene27551.t1 | AT4G33360 | 27.083 | 288 | 175 | 10 | 2 | 279 | 9 | 271 | 4.63e-18 | 84.0 |
| MS.gene27551.t1 | AT4G33360 | 26.855 | 283 | 172 | 10 | 7 | 279 | 2 | 259 | 1.88e-17 | 82.0 |
Find 59 sgRNAs with CRISPR-Local
Find 208 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGCTGCATTGAAACTTTC+TGG | 0.117961 | 7.2:+30685300 | None:intergenic |
| AATTCACTAGCTTTCTTATT+TGG | 0.119579 | 7.2:-30684880 | MS.gene27551:intron |
| GAGAAAGCTGTTCTTGAATT+TGG | 0.151014 | 7.2:-30684991 | MS.gene27551:CDS |
| TTCATATTCTAGAGAGCTTA+TGG | 0.191999 | 7.2:-30681749 | MS.gene27551:intron |
| GAGCAATTGTACCTCCCTTT+TGG | 0.241092 | 7.2:+30681950 | None:intergenic |
| TTCATTTGCCCTAAGCTTCC+TGG | 0.249284 | 7.2:-30684913 | MS.gene27551:CDS |
| GGTAGCTAACATCTTTCTTT+TGG | 0.266690 | 7.2:+30685382 | None:intergenic |
| ACAGGAGGTACAGGATTTAT+TGG | 0.272107 | 7.2:-30686391 | MS.gene27551:CDS |
| AGAGAGCTTATGGGAGTTAA+AGG | 0.273617 | 7.2:-30681739 | MS.gene27551:CDS |
| AAAGGAAGAGTTTGTGTAAC+AGG | 0.279492 | 7.2:-30686409 | MS.gene27551:CDS |
| AGAACCATTGATGGAGCATT+AGG | 0.319772 | 7.2:-30685198 | MS.gene27551:CDS |
| AGGTAATGGATGAAAGTTAT+TGG | 0.353449 | 7.2:-30685083 | MS.gene27551:CDS |
| GAAGTTAAATGTGGAAGCTT+AGG | 0.375861 | 7.2:+30681715 | None:intergenic |
| GTACAGGATTTATTGGTTCA+TGG | 0.376586 | 7.2:-30686384 | MS.gene27551:CDS |
| ATTTGGAGAACAACATGGTT+TGG | 0.377334 | 7.2:-30684974 | MS.gene27551:CDS |
| AATTGAATGTTGCAAGGAAA+AGG | 0.383505 | 7.2:-30681629 | MS.gene27551:CDS |
| TCATATTCTAGAGAGCTTAT+GGG | 0.397986 | 7.2:-30681748 | MS.gene27551:intron |
| TTGCTGCATTGAAACTTTCT+GGG | 0.400104 | 7.2:+30685301 | None:intergenic |
| TAAACTGAGCCAGGAAGCTT+AGG | 0.400902 | 7.2:+30684904 | None:intergenic |
| TCGTTCTCTTCAAAATCAAT+TGG | 0.419138 | 7.2:+30685243 | None:intergenic |
| CAAGTTCATGTATAGCTTTG+AGG | 0.424452 | 7.2:-30681668 | MS.gene27551:CDS |
| CTTGAACATCCTAATCCAAA+AGG | 0.439060 | 7.2:-30681965 | MS.gene27551:CDS |
| ATTAAGAAACTCCTTGAAGA+TGG | 0.440826 | 7.2:-30686358 | MS.gene27551:CDS |
| TCATCAATAGTTGCAATGAA+TGG | 0.444162 | 7.2:+30681926 | None:intergenic |
| CGTCATCAACATGCACCATA+TGG | 0.451162 | 7.2:+30682011 | None:intergenic |
| AATTCCTAATGCTCCATCAA+TGG | 0.462695 | 7.2:+30685194 | None:intergenic |
| AGTTTCAATGCAGCAATTGA+AGG | 0.465129 | 7.2:-30685294 | MS.gene27551:CDS |
| GGCAGCCTCTCGTCTCCATA+TGG | 0.466564 | 7.2:-30682026 | MS.gene27551:CDS |
| TAACAGTGTAACCATCTTCA+AGG | 0.473218 | 7.2:+30686347 | None:intergenic |
| AAACAAAGAAGAAGAGGTAA+TGG | 0.474396 | 7.2:-30685097 | MS.gene27551:CDS |
| TCAAAGAAACTGATGGATGC+TGG | 0.475623 | 7.2:-30681694 | MS.gene27551:CDS |
| TAGCTTTGAGGAAATGTTTG+AGG | 0.486426 | 7.2:-30681656 | MS.gene27551:CDS |
| GTTTGTGTAACAGGAGGTAC+AGG | 0.492728 | 7.2:-30686400 | MS.gene27551:CDS |
| ATTGAATGTTGCAAGGAAAA+GGG | 0.495429 | 7.2:-30681628 | MS.gene27551:CDS |
| GCAGCAATTGAAGGGTGCAT+TGG | 0.498418 | 7.2:-30685285 | MS.gene27551:CDS |
| AGCTTTGAGGAAATGTTTGA+GGG | 0.501932 | 7.2:-30681655 | MS.gene27551:CDS |
| ACAGCATATGACCAAGCAAA+AGG | 0.516501 | 7.2:+30685030 | None:intergenic |
| GTGGTAATGGAAGAAGAGAA+AGG | 0.524390 | 7.2:-30686427 | None:intergenic |
| AGTGAATTATAAACTGAGCC+AGG | 0.528708 | 7.2:+30684895 | None:intergenic |
| TTTAACTTCAAAGAAACTGA+TGG | 0.529224 | 7.2:-30681701 | MS.gene27551:CDS |
| AGGAAGCTTAGGGCAAATGA+AGG | 0.532077 | 7.2:+30684915 | None:intergenic |
| AAGGGTCCAACAACAAAACT+TGG | 0.536983 | 7.2:+30684934 | None:intergenic |
| CTTGAATTTGGAGAACAACA+TGG | 0.539504 | 7.2:-30684979 | MS.gene27551:CDS |
| TGTAGAACTCACTTGGATGT+TGG | 0.541281 | 7.2:+30681860 | None:intergenic |
| TTGAACATCCTAATCCAAAA+GGG | 0.565903 | 7.2:-30681964 | MS.gene27551:CDS |
| AAACTGAGCCAGGAAGCTTA+GGG | 0.566911 | 7.2:+30684905 | None:intergenic |
| GTTTCAATGCAGCAATTGAA+GGG | 0.573950 | 7.2:-30685293 | MS.gene27551:CDS |
| ACCTGGATTAGATCTAATAG+TGG | 0.578445 | 7.2:+30686321 | None:intergenic |
| ACCACTATTAGATCTAATCC+AGG | 0.581520 | 7.2:-30686322 | MS.gene27551:intron |
| TGATATTGACAATAGTCCAT+TGG | 0.582137 | 7.2:-30682047 | MS.gene27551:CDS |
| TGGAGACGAGAGGCTGCCAA+TGG | 0.597283 | 7.2:+30682031 | None:intergenic |
| AGTTTCTTTGAAGTTAAATG+TGG | 0.603651 | 7.2:+30681706 | None:intergenic |
| GGGCGCAATTGAATGTTGCA+AGG | 0.611585 | 7.2:-30681635 | MS.gene27551:CDS |
| AACATCCTAATCCAAAAGGG+AGG | 0.662110 | 7.2:-30681961 | MS.gene27551:CDS |
| GGAAGCTTAGGGCAAATGAA+GGG | 0.663348 | 7.2:+30684916 | None:intergenic |
| AATCAATTGGAGTAGCTGTG+TGG | 0.667434 | 7.2:+30685256 | None:intergenic |
| GGAAGAGTTTGTGTAACAGG+AGG | 0.678445 | 7.2:-30686406 | MS.gene27551:CDS |
| ATGCACCATATGGAGACGAG+AGG | 0.702189 | 7.2:+30682021 | None:intergenic |
| ATGCATTTGGAAGATTTGTG+AGG | 0.707774 | 7.2:+30685361 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATATTAAAATATGCA+AGG | + | chr7.2:30684137-30684156 | None:intergenic | 10.0% |
| !! | TATATAGAATTAAAAACATT+TGG | - | chr7.2:30684716-30684735 | MS.gene27551:intron | 10.0% |
| !! | TTAACAAAATATTTAACAAA+GGG | - | chr7.2:30683998-30684017 | MS.gene27551:intron | 10.0% |
| !! | TTTAACAAAATATTTAACAA+AGG | - | chr7.2:30683997-30684016 | MS.gene27551:intron | 10.0% |
| !!! | AAATATACTACAATTTTTTT+AGG | + | chr7.2:30685835-30685854 | None:intergenic | 10.0% |
| !!! | AATATACTACAATTTTTTTA+GGG | + | chr7.2:30685834-30685853 | None:intergenic | 10.0% |
| !!! | ATTTTATACAAAAAGTTTAA+AGG | - | chr7.2:30683825-30683844 | MS.gene27551:intron | 10.0% |
| !!! | ATTTTGATTTTAAATTATCA+AGG | - | chr7.2:30684756-30684775 | MS.gene27551:intron | 10.0% |
| !!! | TTTTGATTTTAAATTATCAA+GGG | - | chr7.2:30684757-30684776 | MS.gene27551:intron | 10.0% |
| !!! | TTTTTTTTTACTTTCAAAAA+GGG | + | chr7.2:30681746-30681765 | None:intergenic | 10.0% |
| !! | AAAATCATGTATGTAAATAA+AGG | + | chr7.2:30685643-30685662 | None:intergenic | 15.0% |
| !! | AACAAAAATGACATATAATT+TGG | + | chr7.2:30682419-30682438 | None:intergenic | 15.0% |
| !! | AATGTAATTTAACAATGAAT+TGG | + | chr7.2:30681778-30681797 | None:intergenic | 15.0% |
| !! | AATTAATGAAAATTAACAAG+TGG | - | chr7.2:30685952-30685971 | MS.gene27551:intron | 15.0% |
| !! | AATTTAAATGAATGACAAAA+TGG | - | chr7.2:30683952-30683971 | MS.gene27551:intron | 15.0% |
| !! | ACAAAAAAATAAACTCTTAT+AGG | + | chr7.2:30685906-30685925 | None:intergenic | 15.0% |
| !! | ATTTACGATGATTATTAATA+AGG | - | chr7.2:30685087-30685106 | MS.gene27551:CDS | 15.0% |
| !! | TTTAATTAAAAATGTAACAG+TGG | + | chr7.2:30681809-30681828 | None:intergenic | 15.0% |
| !!! | AAAAAGATTAGTTATTTGAT+TGG | - | chr7.2:30682177-30682196 | MS.gene27551:intron | 15.0% |
| !!! | AAAAGATTAGTTATTTGATT+GGG | - | chr7.2:30682178-30682197 | MS.gene27551:intron | 15.0% |
| !!! | AATACTTTTTTTTTTCTCAA+AGG | - | chr7.2:30683481-30683500 | MS.gene27551:intron | 15.0% |
| !!! | ACAATATAAATTTTAACCAT+CGG | + | chr7.2:30682309-30682328 | None:intergenic | 15.0% |
| !!! | ATAAGAGTTTATTTTTTTGT+GGG | - | chr7.2:30685906-30685925 | MS.gene27551:intron | 15.0% |
| !!! | ATATACTACAATTTTTTTAG+GGG | + | chr7.2:30685833-30685852 | None:intergenic | 15.0% |
| !!! | ATGTTGGTATTTTAAATTTA+GGG | + | chr7.2:30686166-30686185 | None:intergenic | 15.0% |
| !!! | GTTTTTTTTTACTTTCAAAA+AGG | + | chr7.2:30681747-30681766 | None:intergenic | 15.0% |
| !!! | TATAAGAGTTTATTTTTTTG+TGG | - | chr7.2:30685905-30685924 | MS.gene27551:intron | 15.0% |
| !!! | TTTATCTTCTTTTTAATTCA+AGG | - | chr7.2:30684693-30684712 | MS.gene27551:intron | 15.0% |
| !!! | TTTGTATTCAAAATTTTACT+AGG | + | chr7.2:30683288-30683307 | None:intergenic | 15.0% |
| !!! | TTTTTTTAAGCTAAAAATTC+CGG | - | chr7.2:30682228-30682247 | MS.gene27551:intron | 15.0% |
| !! | AAAGGAATTCTTAAATTAGA+AGG | + | chr7.2:30685125-30685144 | None:intergenic | 20.0% |
| !! | AATATACCAAGAAGTAATAT+AGG | - | chr7.2:30684972-30684991 | MS.gene27551:CDS | 20.0% |
| !! | AGAATTCCTTCAAAAATTTA+AGG | - | chr7.2:30685041-30685060 | MS.gene27551:CDS | 20.0% |
| !! | ATTGCAAATGTAATGATTAA+AGG | + | chr7.2:30685169-30685188 | None:intergenic | 20.0% |
| !! | ATTTCGTTAAGTTATTAACA+TGG | + | chr7.2:30686225-30686244 | None:intergenic | 20.0% |
| !! | GATATATACTAATATATGTG+AGG | + | chr7.2:30683728-30683747 | None:intergenic | 20.0% |
| !! | TAATAAAAAGTCAACTTCAA+CGG | - | chr7.2:30685782-30685801 | MS.gene27551:intron | 20.0% |
| !! | TATACAAAAAGTTTAAAGGA+AGG | - | chr7.2:30683829-30683848 | MS.gene27551:intron | 20.0% |
| !! | TCTTTATATAAGAAAACGAA+AGG | + | chr7.2:30684578-30684597 | None:intergenic | 20.0% |
| !! | TTATGTTCTTAACACTATAA+AGG | + | chr7.2:30685143-30685162 | None:intergenic | 20.0% |
| !! | TTTAGAAGTTAAAAACCAAT+AGG | + | chr7.2:30684290-30684309 | None:intergenic | 20.0% |
| !!! | ACTTTTCTCGATAAAAATAA+TGG | - | chr7.2:30682126-30682145 | MS.gene27551:intron | 20.0% |
| !!! | CAACTAGTACATTTTATTAA+TGG | - | chr7.2:30683504-30683523 | MS.gene27551:intron | 20.0% |
| !!! | CTTGCTATAAATGATTTTTT+GGG | - | chr7.2:30684510-30684529 | MS.gene27551:intron | 20.0% |
| !!! | GAAAAATTGGTTTCTAATTT+TGG | + | chr7.2:30682015-30682034 | None:intergenic | 20.0% |
| !!! | GATGTTGGTATTTTAAATTT+AGG | + | chr7.2:30686167-30686186 | None:intergenic | 20.0% |
| !!! | GATTTTTAGAAAAAATTTGC+TGG | - | chr7.2:30685296-30685315 | MS.gene27551:CDS | 20.0% |
| !!! | TATACAACTATTTTTTTGAC+TGG | + | chr7.2:30685865-30685884 | None:intergenic | 20.0% |
| !!! | TATTTTAAATTTAGGGTACT+TGG | + | chr7.2:30686159-30686178 | None:intergenic | 20.0% |
| !!! | TCTTGCTATAAATGATTTTT+TGG | - | chr7.2:30684509-30684528 | MS.gene27551:intron | 20.0% |
| !!! | TGACTATTAGTCTTAAAAAA+AGG | - | chr7.2:30685188-30685207 | MS.gene27551:CDS | 20.0% |
| !!! | TTATCTCCTTAAATTTTTGA+AGG | + | chr7.2:30685050-30685069 | None:intergenic | 20.0% |
| !!! | TTTATGAGATGTGAATTTTT+GGG | - | chr7.2:30682357-30682376 | MS.gene27551:intron | 20.0% |
| !!! | TTTTAAATCGTTTTTGCTAA+TGG | - | chr7.2:30684536-30684555 | MS.gene27551:intron | 20.0% |
| !!! | TTTTATGAGATGTGAATTTT+TGG | - | chr7.2:30682356-30682375 | MS.gene27551:intron | 20.0% |
| !!! | TTTTCGCTAGTTATATTTAA+AGG | + | chr7.2:30682274-30682293 | None:intergenic | 20.0% |
| !!! | TTTTTTAAGCTAAAAATTCC+GGG | - | chr7.2:30682229-30682248 | MS.gene27551:intron | 20.0% |
| ! | ACATAATTATGTAGAACTGT+AGG | + | chr7.2:30684819-30684838 | None:intergenic | 25.0% |
| ! | ACCAAAATTATGTAAAAAGC+AGG | - | chr7.2:30682634-30682653 | MS.gene27551:intron | 25.0% |
| ! | AGTTTAAAGGAAGGTAAAAT+TGG | - | chr7.2:30683838-30683857 | MS.gene27551:intron | 25.0% |
| ! | ATCGTAAATGAAATGTCTAA+AGG | + | chr7.2:30685076-30685095 | None:intergenic | 25.0% |
| ! | ATTGTTTCAACCAAATTATG+TGG | - | chr7.2:30682324-30682343 | MS.gene27551:intron | 25.0% |
| ! | ATTTATAGCAAGAATGAATC+AGG | + | chr7.2:30684502-30684521 | None:intergenic | 25.0% |
| ! | GTATATTAACCTTTGATACA+GGG | + | chr7.2:30684959-30684978 | None:intergenic | 25.0% |
| ! | TAGAGAATAATGAGAGAAAA+TGG | + | chr7.2:30684473-30684492 | None:intergenic | 25.0% |
| ! | TATGAATAGAGATTTGAAGA+GGG | + | chr7.2:30682081-30682100 | None:intergenic | 25.0% |
| ! | TCCAATAAATACATATGACA+TGG | - | chr7.2:30683576-30683595 | MS.gene27551:intron | 25.0% |
| ! | TCCATGTCATATGTATTTAT+TGG | + | chr7.2:30683580-30683599 | None:intergenic | 25.0% |
| ! | TGTTGTTGATCAATTAACAA+AGG | + | chr7.2:30685737-30685756 | None:intergenic | 25.0% |
| ! | TTAAGTTATTAACATGGAGA+AGG | + | chr7.2:30686219-30686238 | None:intergenic | 25.0% |
| ! | TTAATTGATCAACAACAACA+TGG | - | chr7.2:30685740-30685759 | MS.gene27551:intron | 25.0% |
| ! | TTATGAATAGAGATTTGAAG+AGG | + | chr7.2:30682082-30682101 | None:intergenic | 25.0% |
| !! | AAAACAAAGCGATTTTTGAA+TGG | + | chr7.2:30684385-30684404 | None:intergenic | 25.0% |
| !! | AGCAATGAATGTTTAAAACA+CGG | + | chr7.2:30683404-30683423 | None:intergenic | 25.0% |
| !! | CGATTTTTGAATGGAAATAT+AGG | + | chr7.2:30684376-30684395 | None:intergenic | 25.0% |
| !! | GTATTCAAAATTTTACTAGG+TGG | + | chr7.2:30683285-30683304 | None:intergenic | 25.0% |
| !! | TTAAAGGAGATACCAAATTT+TGG | + | chr7.2:30682258-30682277 | None:intergenic | 25.0% |
| !! | TTTAAAACAAGCAATGAACT+GGG | - | chr7.2:30684788-30684807 | MS.gene27551:intron | 25.0% |
| !! | TTTAACTTCAAAGAAACTGA+TGG | - | chr7.2:30686338-30686357 | MS.gene27551:CDS | 25.0% |
| !! | TTTTCAAAACAAAGAAGAAG+AGG | - | chr7.2:30682936-30682955 | MS.gene27551:intron | 25.0% |
| !!! | AATTCACTAGCTTTCTTATT+TGG | - | chr7.2:30683159-30683178 | MS.gene27551:intron | 25.0% |
| !!! | ACCATGTGATTTTAATACAA+CGG | - | chr7.2:30683320-30683339 | MS.gene27551:intron | 25.0% |
| !!! | AGTTTCTTTGAAGTTAAATG+TGG | + | chr7.2:30686336-30686355 | None:intergenic | 25.0% |
| !!! | ATTAATTTGTAGAACTCACT+TGG | + | chr7.2:30686189-30686208 | None:intergenic | 25.0% |
| !!! | TGTTGCTTTTCAAAGAATTT+TGG | + | chr7.2:30683701-30683720 | None:intergenic | 25.0% |
| !!! | TGTTTTAAACATTCATTGCT+TGG | - | chr7.2:30683404-30683423 | MS.gene27551:intron | 25.0% |
| !!! | TTTTAAAACAAGCAATGAAC+TGG | - | chr7.2:30684787-30684806 | MS.gene27551:intron | 25.0% |
| AAACAAAGAAGAAGAGGTAA+TGG | - | chr7.2:30682942-30682961 | MS.gene27551:intron | 30.0% | |
| AAATACCTTATATGTACTCG+TGG | - | chr7.2:30683646-30683665 | MS.gene27551:intron | 30.0% | |
| AACACTACTACCATACATTA+AGG | - | chr7.2:30684085-30684104 | MS.gene27551:intron | 30.0% | |
| AATTGAATGTTGCAAGGAAA+AGG | - | chr7.2:30686410-30686429 | MS.gene27551:CDS | 30.0% | |
| ACCCTCAAAAATTAGATTGA+GGG | + | chr7.2:30685220-30685239 | None:intergenic | 30.0% | |
| ACCGTTGTATTAAAATCACA+TGG | + | chr7.2:30683324-30683343 | None:intergenic | 30.0% | |
| AGAATAATGAGAGAAAATGG+AGG | + | chr7.2:30684470-30684489 | None:intergenic | 30.0% | |
| ATACCAAGAAGTAATATAGG+TGG | - | chr7.2:30684975-30684994 | MS.gene27551:CDS | 30.0% | |
| ATCAACACTATCGTTATGAT+GGG | - | chr7.2:30683751-30683770 | MS.gene27551:intron | 30.0% | |
| ATTAAGAAACTCCTTGAAGA+TGG | - | chr7.2:30681681-30681700 | MS.gene27551:CDS | 30.0% | |
| ATTGAATGTTGCAAGGAAAA+GGG | - | chr7.2:30686411-30686430 | MS.gene27551:CDS | 30.0% | |
| ATTTGTGAGACCACATAATT+TGG | + | chr7.2:30682337-30682356 | None:intergenic | 30.0% | |
| GATATTTCAAACGTAGAGAA+TGG | + | chr7.2:30684219-30684238 | None:intergenic | 30.0% | |
| GGTATATTAACCTTTGATAC+AGG | + | chr7.2:30684960-30684979 | None:intergenic | 30.0% | |
| TACCCTCAAAAATTAGATTG+AGG | + | chr7.2:30685221-30685240 | None:intergenic | 30.0% | |
| TATCAACACTATCGTTATGA+TGG | - | chr7.2:30683750-30683769 | MS.gene27551:intron | 30.0% | |
| TCAAATGCTTGCATAAGAAA+AGG | + | chr7.2:30684326-30684345 | None:intergenic | 30.0% | |
| TCATCAATAGTTGCAATGAA+TGG | + | chr7.2:30686116-30686135 | None:intergenic | 30.0% | |
| TCGTTCTCTTCAAAATCAAT+TGG | + | chr7.2:30682799-30682818 | None:intergenic | 30.0% | |
| TGATATTGACAATAGTCCAT+TGG | - | chr7.2:30685992-30686011 | MS.gene27551:intron | 30.0% | |
| TGATTAAAACCTCGTGAAAA+TGG | - | chr7.2:30685688-30685707 | MS.gene27551:intron | 30.0% | |
| TTACCACCTATATTACTTCT+TGG | + | chr7.2:30684981-30685000 | None:intergenic | 30.0% | |
| TTGAACATCCTAATCCAAAA+GGG | - | chr7.2:30686075-30686094 | MS.gene27551:intron | 30.0% | |
| ! | ACCCTCAATCTAATTTTTGA+GGG | - | chr7.2:30685216-30685235 | MS.gene27551:CDS | 30.0% |
| ! | AGTTTTACAGCAACACAAAA+AGG | + | chr7.2:30685270-30685289 | None:intergenic | 30.0% |
| ! | ATGCAAGGAATCTTTTAACA+TGG | + | chr7.2:30684122-30684141 | None:intergenic | 30.0% |
| ! | CTTTTAACATGGATCCATTT+AGG | + | chr7.2:30684111-30684130 | None:intergenic | 30.0% |
| ! | GAATGTTTAAAACACGGATT+TGG | + | chr7.2:30683398-30683417 | None:intergenic | 30.0% |
| ! | TACCCTCAATCTAATTTTTG+AGG | - | chr7.2:30685215-30685234 | MS.gene27551:CDS | 30.0% |
| ! | TCATATTCTAGAGAGCTTAT+GGG | - | chr7.2:30686291-30686310 | MS.gene27551:intron | 30.0% |
| ! | TTCATATTCTAGAGAGCTTA+TGG | - | chr7.2:30686290-30686309 | MS.gene27551:intron | 30.0% |
| !! | AGGTAATGGATGAAAGTTAT+TGG | - | chr7.2:30682956-30682975 | MS.gene27551:intron | 30.0% |
| !!! | AAACTGACATTTTTTCCTGT+TGG | - | chr7.2:30684056-30684075 | MS.gene27551:intron | 30.0% |
| !!! | ACATGGAATTTTTTTGCATG+TGG | - | chr7.2:30683593-30683612 | MS.gene27551:intron | 30.0% |
| !!! | ACTATTTTTTTGACTGGACT+TGG | + | chr7.2:30685859-30685878 | None:intergenic | 30.0% |
| !!! | CTAATACCAAGTTTTGTTGT+TGG | - | chr7.2:30683099-30683118 | MS.gene27551:intron | 30.0% |
| !!! | GCCTGCTTTTTACATAATTT+TGG | + | chr7.2:30682638-30682657 | None:intergenic | 30.0% |
| AAAGGAAGAGTTTGTGTAAC+AGG | - | chr7.2:30681630-30681649 | MS.gene27551:CDS | 35.0% | |
| AAGCAACACACTTTGCAAAT+GGG | - | chr7.2:30684625-30684644 | MS.gene27551:intron | 35.0% | |
| AATTCCTAATGCTCCATCAA+TGG | + | chr7.2:30682848-30682867 | None:intergenic | 35.0% | |
| ACCACTATTAGATCTAATCC+AGG | - | chr7.2:30681717-30681736 | MS.gene27551:CDS | 35.0% | |
| ACCATACATTAAGGCCTAAA+TGG | - | chr7.2:30684094-30684113 | MS.gene27551:intron | 35.0% | |
| AGGGAAAGTTGTGTTATCAA+AGG | + | chr7.2:30682062-30682081 | None:intergenic | 35.0% | |
| AGTGAATTATAAACTGAGCC+AGG | + | chr7.2:30683147-30683166 | None:intergenic | 35.0% | |
| AGTTTCAATGCAGCAATTGA+AGG | - | chr7.2:30682745-30682764 | MS.gene27551:intron | 35.0% | |
| ATGCATTTGGAAGATTTGTG+AGG | + | chr7.2:30682681-30682700 | None:intergenic | 35.0% | |
| ATTGCTGCATTGAAACTTTC+TGG | + | chr7.2:30682742-30682761 | None:intergenic | 35.0% | |
| ATTTGGAGAACAACATGGTT+TGG | - | chr7.2:30683065-30683084 | MS.gene27551:intron | 35.0% | |
| CAACACACTATTCTTCTAAG+AGG | - | chr7.2:30684441-30684460 | MS.gene27551:intron | 35.0% | |
| CATAATTGTCCCTGTATCAA+AGG | - | chr7.2:30684947-30684966 | MS.gene27551:CDS | 35.0% | |
| CATTTGATGAGGAGACAATT+TGG | - | chr7.2:30684339-30684358 | MS.gene27551:intron | 35.0% | |
| CTAATGGTGAACTAATGTTC+AGG | - | chr7.2:30684552-30684571 | MS.gene27551:intron | 35.0% | |
| CTTGAACATCCTAATCCAAA+AGG | - | chr7.2:30686074-30686093 | MS.gene27551:intron | 35.0% | |
| CTTGAATTTGGAGAACAACA+TGG | - | chr7.2:30683060-30683079 | MS.gene27551:intron | 35.0% | |
| GAAGGAATTCTTAAGTCAGA+AGG | + | chr7.2:30685032-30685051 | None:intergenic | 35.0% | |
| GAAGTTAAATGTGGAAGCTT+AGG | + | chr7.2:30686327-30686346 | None:intergenic | 35.0% | |
| GAGAAAGCTGTTCTTGAATT+TGG | - | chr7.2:30683048-30683067 | MS.gene27551:intron | 35.0% | |
| GTGACAAAAAGAACCATTGA+TGG | - | chr7.2:30682832-30682851 | MS.gene27551:intron | 35.0% | |
| GTTAAAAACCAATAGGCAGT+AGG | + | chr7.2:30684283-30684302 | None:intergenic | 35.0% | |
| GTTTCAATGCAGCAATTGAA+GGG | - | chr7.2:30682746-30682765 | MS.gene27551:intron | 35.0% | |
| TAACAGTGTAACCATCTTCA+AGG | + | chr7.2:30681695-30681714 | None:intergenic | 35.0% | |
| TACTTTCAAAAAGGGATACC+TGG | + | chr7.2:30681738-30681757 | None:intergenic | 35.0% | |
| TCCATTTAGGCCTTAATGTA+TGG | + | chr7.2:30684098-30684117 | None:intergenic | 35.0% | |
| TCTTATGCAAGCATTTGATG+AGG | - | chr7.2:30684328-30684347 | MS.gene27551:intron | 35.0% | |
| TGTCAGTTTCTTTGATGCAT+TGG | + | chr7.2:30684045-30684064 | None:intergenic | 35.0% | |
| TTGCTGCATTGAAACTTTCT+GGG | + | chr7.2:30682741-30682760 | None:intergenic | 35.0% | |
| ! | AAAGAACATCCATTTTCACG+AGG | + | chr7.2:30685700-30685719 | None:intergenic | 35.0% |
| ! | ACCTGGATTAGATCTAATAG+TGG | + | chr7.2:30681721-30681740 | None:intergenic | 35.0% |
| ! | CAAGTTCATGTATAGCTTTG+AGG | - | chr7.2:30686371-30686390 | MS.gene27551:CDS | 35.0% |
| ! | CTTTTTGTCACAATTTCCTC+TGG | + | chr7.2:30682823-30682842 | None:intergenic | 35.0% |
| ! | GGTAGCTAACATCTTTCTTT+TGG | + | chr7.2:30682660-30682679 | None:intergenic | 35.0% |
| !! | AGCTTTGAGGAAATGTTTGA+GGG | - | chr7.2:30686384-30686403 | MS.gene27551:CDS | 35.0% |
| !! | GTACAGGATTTATTGGTTCA+TGG | - | chr7.2:30681655-30681674 | MS.gene27551:CDS | 35.0% |
| !! | GTGGTAACGTTTTCATATCA+AGG | - | chr7.2:30684994-30685013 | MS.gene27551:CDS | 35.0% |
| !! | TAGCTTTGAGGAAATGTTTG+AGG | - | chr7.2:30686383-30686402 | MS.gene27551:CDS | 35.0% |
| !!! | CTTAGCTTTTGAGATGCATT+TGG | + | chr7.2:30682694-30682713 | None:intergenic | 35.0% |
| AACATCCTAATCCAAAAGGG+AGG | - | chr7.2:30686078-30686097 | MS.gene27551:intron | 40.0% | |
| AAGGGTCCAACAACAAAACT+TGG | + | chr7.2:30683108-30683127 | None:intergenic | 40.0% | |
| AATCAATTGGAGTAGCTGTG+TGG | + | chr7.2:30682786-30682805 | None:intergenic | 40.0% | |
| AATTCCGGGAGACCAAAATT+TGG | - | chr7.2:30682243-30682262 | MS.gene27551:intron | 40.0% | |
| ACAGCATATGACCAAGCAAA+AGG | + | chr7.2:30683012-30683031 | None:intergenic | 40.0% | |
| AGAGAGCTTATGGGAGTTAA+AGG | - | chr7.2:30686300-30686319 | MS.gene27551:intron | 40.0% | |
| AGTAGTGTTATACTGCCAAC+AGG | + | chr7.2:30684074-30684093 | None:intergenic | 40.0% | |
| GAAGCAACACACTTTGCAAA+TGG | - | chr7.2:30684624-30684643 | MS.gene27551:intron | 40.0% | |
| GTTAGCCACGAGTACATATA+AGG | + | chr7.2:30683654-30683673 | None:intergenic | 40.0% | |
| TGGCTAACTTTCATCTGTGT+TGG | - | chr7.2:30683666-30683685 | MS.gene27551:intron | 40.0% | |
| TGTAGAACTCACTTGGATGT+TGG | + | chr7.2:30686182-30686201 | None:intergenic | 40.0% | |
| TTCAATGTATATGACCCGTG+CGG | - | chr7.2:30685345-30685364 | MS.gene27551:CDS | 40.0% | |
| ! | ACACGGATTTGGATTAGATG+CGG | + | chr7.2:30683387-30683406 | None:intergenic | 40.0% |
| ! | ACAGGAGGTACAGGATTTAT+TGG | - | chr7.2:30681648-30681667 | MS.gene27551:CDS | 40.0% |
| ! | AGAACCATTGATGGAGCATT+AGG | - | chr7.2:30682841-30682860 | MS.gene27551:intron | 40.0% |
| ! | TCAAAGAAACTGATGGATGC+TGG | - | chr7.2:30686345-30686364 | MS.gene27551:CDS | 40.0% |
| ! | TTGTACCTCCCTTTTGGATT+AGG | + | chr7.2:30686086-30686105 | None:intergenic | 40.0% |
| !! | GATACCAAATTTTGGTCTCC+CGG | + | chr7.2:30682250-30682269 | None:intergenic | 40.0% |
| !! | TTTTGAAGAGAACGAACCAG+AGG | - | chr7.2:30682804-30682823 | MS.gene27551:intron | 40.0% |
| !!! | GAACTTTGAAGCCTTTTGCT+TGG | - | chr7.2:30682998-30683017 | MS.gene27551:intron | 40.0% |
| AAAAGACAGACACTCTCCGA+TGG | - | chr7.2:30682290-30682309 | MS.gene27551:intron | 45.0% | |
| AAACTGAGCCAGGAAGCTTA+GGG | + | chr7.2:30683137-30683156 | None:intergenic | 45.0% | |
| AAGTGGAAGTTGTTGCATGC+AGG | - | chr7.2:30685969-30685988 | MS.gene27551:intron | 45.0% | |
| AGGAAGCTTAGGGCAAATGA+AGG | + | chr7.2:30683127-30683146 | None:intergenic | 45.0% | |
| CGTCATCAACATGCACCATA+TGG | + | chr7.2:30686031-30686050 | None:intergenic | 45.0% | |
| GCTGCTCTTCGAAGAATTGT+TGG | - | chr7.2:30683539-30683558 | MS.gene27551:intron | 45.0% | |
| GGAAGAGTTTGTGTAACAGG+AGG | - | chr7.2:30681633-30681652 | MS.gene27551:CDS | 45.0% | |
| GGAAGCTTAGGGCAAATGAA+GGG | + | chr7.2:30683126-30683145 | None:intergenic | 45.0% | |
| GTGCTTACTGCAATGATCGT+AGG | - | chr7.2:30683350-30683369 | MS.gene27551:intron | 45.0% | |
| TAAACTGAGCCAGGAAGCTT+AGG | + | chr7.2:30683138-30683157 | None:intergenic | 45.0% | |
| TTCATTTGCCCTAAGCTTCC+TGG | - | chr7.2:30683126-30683145 | MS.gene27551:intron | 45.0% | |
| ! | GAGCAATTGTACCTCCCTTT+TGG | + | chr7.2:30686092-30686111 | None:intergenic | 45.0% |
| ! | GTTTGTGTAACAGGAGGTAC+AGG | - | chr7.2:30681639-30681658 | MS.gene27551:CDS | 45.0% |
| ! | TGATAGTGCCTACTGCCTAT+TGG | - | chr7.2:30684272-30684291 | MS.gene27551:intron | 45.0% |
| !! | AAAAAAAAAAATTGAAAAAT+TGG | + | chr7.2:30682028-30682047 | None:intergenic | 5.0% |
| !!! | TTAATTTAAAAATCTTTTAT+AGG | + | chr7.2:30685938-30685957 | None:intergenic | 5.0% |
| ATGCACCATATGGAGACGAG+AGG | + | chr7.2:30686021-30686040 | None:intergenic | 50.0% | |
| GGGCGCAATTGAATGTTGCA+AGG | - | chr7.2:30686404-30686423 | MS.gene27551:CDS | 50.0% | |
| ! | GCAGCAATTGAAGGGTGCAT+TGG | - | chr7.2:30682754-30682773 | MS.gene27551:intron | 50.0% |
| ATATGACCCGTGCGGAAGCA+CGG | - | chr7.2:30685353-30685372 | MS.gene27551:CDS | 55.0% | |
| CGTATACCCGTGCTTCCGCA+CGG | + | chr7.2:30685363-30685382 | None:intergenic | 60.0% | |
| GGCAGCCTCTCGTCTCCATA+TGG | - | chr7.2:30686013-30686032 | MS.gene27551:intron | 60.0% | |
| GTATACCCGTGCTTCCGCAC+GGG | + | chr7.2:30685362-30685381 | None:intergenic | 60.0% | |
| TGGAGACGAGAGGCTGCCAA+TGG | + | chr7.2:30686011-30686030 | None:intergenic | 60.0% | |
| ! | TATGACCCGTGCGGAAGCAC+GGG | - | chr7.2:30685354-30685373 | MS.gene27551:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 30681618 | 30686443 | 30681618 | ID=MS.gene27551 |
| chr7.2 | mRNA | 30681618 | 30686443 | 30681618 | ID=MS.gene27551.t1;Parent=MS.gene27551 |
| chr7.2 | exon | 30686323 | 30686443 | 30686323 | ID=MS.gene27551.t1.exon1;Parent=MS.gene27551.t1 |
| chr7.2 | CDS | 30686323 | 30686443 | 30686323 | ID=cds.MS.gene27551.t1;Parent=MS.gene27551.t1 |
| chr7.2 | exon | 30684881 | 30685405 | 30684881 | ID=MS.gene27551.t1.exon2;Parent=MS.gene27551.t1 |
| chr7.2 | CDS | 30684881 | 30685405 | 30684881 | ID=cds.MS.gene27551.t1;Parent=MS.gene27551.t1 |
| chr7.2 | exon | 30681872 | 30682070 | 30681872 | ID=MS.gene27551.t1.exon3;Parent=MS.gene27551.t1 |
| chr7.2 | CDS | 30681872 | 30682070 | 30681872 | ID=cds.MS.gene27551.t1;Parent=MS.gene27551.t1 |
| chr7.2 | exon | 30681618 | 30681759 | 30681618 | ID=MS.gene27551.t1.exon4;Parent=MS.gene27551.t1 |
| chr7.2 | CDS | 30681618 | 30681759 | 30681618 | ID=cds.MS.gene27551.t1;Parent=MS.gene27551.t1 |
| Gene Sequence |
| Protein sequence |
