Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27688.t1 | XP_003623888.1 | 95.7 | 350 | 14 | 1 | 3 | 351 | 2 | 351 | 1.00E-181 | 646 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27688.t1 | O65271 | 74.6 | 362 | 79 | 3 | 1 | 351 | 1 | 360 | 8.6e-145 | 514.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27688.t1 | G7L3I6 | 95.7 | 350 | 14 | 1 | 3 | 351 | 2 | 351 | 7.4e-182 | 646.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene65953 | MS.gene27688 | PPI |
| MS.gene27688 | MS.gene07116 | PPI |
| MS.gene27688 | MS.gene026617 | PPI |
| MS.gene27688 | MS.gene06972 | PPI |
| MS.gene27688 | MS.gene22986 | PPI |
| MS.gene33587 | MS.gene27688 | PPI |
| MS.gene27688 | MS.gene62999 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27688.t1 | MTR_7g076680 | 97.159 | 352 | 8 | 2 | 1 | 351 | 1 | 351 | 0.0 | 686 |
| MS.gene27688.t1 | MTR_7g076680 | 92.412 | 369 | 9 | 3 | 1 | 351 | 1 | 368 | 0.0 | 674 |
| MS.gene27688.t1 | MTR_7g076680 | 97.411 | 309 | 6 | 1 | 43 | 351 | 41 | 347 | 0.0 | 605 |
| MS.gene27688.t1 | MTR_7g108580 | 66.202 | 287 | 97 | 0 | 60 | 346 | 2 | 288 | 4.93e-142 | 404 |
| MS.gene27688.t1 | MTR_1g030450 | 62.799 | 293 | 109 | 0 | 58 | 350 | 68 | 360 | 1.36e-135 | 390 |
| MS.gene27688.t1 | MTR_3g007490 | 54.072 | 307 | 140 | 1 | 40 | 346 | 53 | 358 | 4.59e-120 | 351 |
| MS.gene27688.t1 | MTR_3g007580 | 45.536 | 112 | 54 | 3 | 185 | 295 | 13 | 118 | 1.09e-26 | 103 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27688.t1 | AT4G00620 | 73.901 | 364 | 78 | 3 | 1 | 351 | 1 | 360 | 0.0 | 535 |
| MS.gene27688.t1 | AT4G00600 | 62.139 | 346 | 94 | 2 | 6 | 351 | 2 | 310 | 1.47e-152 | 431 |
| MS.gene27688.t1 | AT2G38660 | 67.483 | 286 | 93 | 0 | 62 | 347 | 65 | 350 | 2.76e-142 | 407 |
| MS.gene27688.t1 | AT2G38660 | 67.483 | 286 | 93 | 0 | 62 | 347 | 65 | 350 | 2.76e-142 | 407 |
| MS.gene27688.t1 | AT3G12290 | 64.360 | 289 | 103 | 0 | 59 | 347 | 8 | 296 | 1.75e-138 | 395 |
| MS.gene27688.t1 | AT2G38660 | 65.354 | 254 | 88 | 0 | 62 | 315 | 65 | 318 | 8.67e-123 | 357 |
| MS.gene27688.t1 | AT2G38660 | 64.607 | 178 | 63 | 0 | 62 | 239 | 65 | 242 | 1.48e-81 | 248 |
| MS.gene27688.t1 | AT2G38660 | 56.122 | 98 | 43 | 0 | 62 | 159 | 65 | 162 | 1.15e-32 | 120 |
| MS.gene27688.t1 | AT2G38660 | 56.122 | 98 | 43 | 0 | 62 | 159 | 65 | 162 | 1.15e-32 | 120 |
| MS.gene27688.t1 | AT2G38660 | 56.122 | 98 | 43 | 0 | 62 | 159 | 65 | 162 | 1.15e-32 | 120 |
| MS.gene27688.t1 | AT2G38660 | 56.122 | 98 | 43 | 0 | 62 | 159 | 65 | 162 | 1.15e-32 | 120 |
Find 102 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTCAGGGTTAGTAGTTC+TGG | 0.228400 | 7.3:-29481799 | None:intergenic |
| GCTTGTCTAATGATCTCTTC+AGG | 0.250923 | 7.3:-29481813 | None:intergenic |
| TAGATTATTATTCAAAACTA+TGG | 0.273981 | 7.3:-29482250 | None:intergenic |
| CAGCTTCCCTTAACCATGTT+TGG | 0.293538 | 7.3:-29481864 | None:intergenic |
| AACTGTTGGAATAAATTCTT+TGG | 0.296753 | 7.3:+29480385 | MS.gene27688:CDS |
| AATGATGATCCTTCGGTTCA+TGG | 0.307214 | 7.3:+29480467 | MS.gene27688:CDS |
| GAAGCTGCGGGTGTGATTCC+AGG | 0.350503 | 7.3:+29480290 | MS.gene27688:CDS |
| CATCATTGTAACCTGCAATA+TGG | 0.358167 | 7.3:-29480451 | None:intergenic |
| TTCTTCTTCTGTGGAATCCT+CGG | 0.369003 | 7.3:-29480420 | None:intergenic |
| TCTTCTGCCAAGGTGATTGA+TGG | 0.377809 | 7.3:+29480209 | MS.gene27688:CDS |
| TAGTTCTCGAGGTTATAAAT+TGG | 0.383280 | 7.3:+29482103 | MS.gene27688:CDS |
| TCTGCTATTACACCTGTTCC+TGG | 0.386128 | 7.3:+29482164 | MS.gene27688:CDS |
| AGAAGCATTGCAATGGTCAT+TGG | 0.394487 | 7.3:-29482197 | None:intergenic |
| CATGAATGGGTTGGCGGCGG+AGG | 0.411669 | 7.3:-29478834 | None:intergenic |
| AATAGCAGAGGCAACTTTAA+CGG | 0.414608 | 7.3:-29482150 | None:intergenic |
| TGGCCAACCAAACATGGTTA+AGG | 0.423599 | 7.3:+29481857 | MS.gene27688:CDS |
| GGGTTAGCTGTTATCCTTGT+CGG | 0.432105 | 7.3:+29480311 | MS.gene27688:CDS |
| TGAGAGAACACGGGATGAAA+AGG | 0.432833 | 7.3:-29478899 | None:intergenic |
| AAGAGAGCAGTGGTGGATGA+AGG | 0.434224 | 7.3:-29478811 | None:intergenic |
| TCATCCCGTGTTCTCTCAGT+TGG | 0.436602 | 7.3:+29478904 | MS.gene27688:CDS |
| CTTGTCTAATGATCTCTTCA+GGG | 0.436968 | 7.3:-29481812 | None:intergenic |
| TTGGTGTACAAGGAACAAAC+AGG | 0.437882 | 7.3:-29481496 | None:intergenic |
| TTATAACCTCGAGAACTACT+TGG | 0.442421 | 7.3:-29482098 | None:intergenic |
| TTCCCTTAACCATGTTTGGT+TGG | 0.450587 | 7.3:-29481860 | None:intergenic |
| ATGCATCCCTTTGGTGTACA+AGG | 0.452753 | 7.3:-29481506 | None:intergenic |
| TAAAATCTACTCACATCTAC+CGG | 0.455869 | 7.3:-29481927 | None:intergenic |
| AGAATCGAGAAGGATGTAGA+TGG | 0.460542 | 7.3:+29481425 | MS.gene27688:CDS |
| GGAAAGAGGGCTGTTGTGAT+TGG | 0.460952 | 7.3:+29481563 | MS.gene27688:CDS |
| TGAAAAGGGAGAGGAGTGAA+TGG | 0.470291 | 7.3:-29478884 | None:intergenic |
| AGGTTACAATGATGATCCTT+CGG | 0.476126 | 7.3:+29480460 | MS.gene27688:CDS |
| GTTCAAAACTTCTTCTTCTG+TGG | 0.476229 | 7.3:-29480429 | None:intergenic |
| AGAGGTGGGACCCACATGAA+TGG | 0.477451 | 7.3:-29478848 | None:intergenic |
| TCTCGAGGTTATAAATTGGT+TGG | 0.483910 | 7.3:+29482107 | MS.gene27688:CDS |
| GGACCAACACCTCCAGGAAC+AGG | 0.484865 | 7.3:-29482176 | None:intergenic |
| TCTTCTTCTGTGGAATCCTC+GGG | 0.484956 | 7.3:-29480419 | None:intergenic |
| ACACCTGTTCCTGGAGGTGT+TGG | 0.486940 | 7.3:+29482173 | MS.gene27688:CDS |
| AGTAGTTCTATGCATCCCTT+TGG | 0.488653 | 7.3:-29481515 | None:intergenic |
| ACCCGCAGCTTCTCTCATCC+TGG | 0.489497 | 7.3:-29480279 | None:intergenic |
| GGCCAACCAAACATGGTTAA+GGG | 0.491292 | 7.3:+29481858 | MS.gene27688:CDS |
| AGGAGTGAATGGTGAAGAAG+CGG | 0.498254 | 7.3:-29478873 | None:intergenic |
| GACCCACATGAATGGGTTGG+CGG | 0.502781 | 7.3:-29478840 | None:intergenic |
| TTTGTTCCTTGTACACCAAA+GGG | 0.503886 | 7.3:+29481500 | MS.gene27688:CDS |
| AGATAGCAGTTGAAGTCTCC+AGG | 0.504597 | 7.3:+29480261 | MS.gene27688:CDS |
| CAAACATGGTTAAGGGAAGC+TGG | 0.505628 | 7.3:+29481865 | MS.gene27688:CDS |
| CCACATGAATGGGTTGGCGG+CGG | 0.512291 | 7.3:-29478837 | None:intergenic |
| AAGAAGGCTTGTGAAACTGT+TGG | 0.518835 | 7.3:+29480371 | MS.gene27688:CDS |
| AATGGTGAAGAAGCGGAGAG+AGG | 0.519746 | 7.3:-29478866 | None:intergenic |
| GCAAGCCGACCAATATTCAA+TGG | 0.520581 | 7.3:-29481455 | None:intergenic |
| TTCATCCATTGAATATTGGT+CGG | 0.523426 | 7.3:+29481450 | MS.gene27688:CDS |
| TGCTGTTGGCCAACCAAACA+TGG | 0.525043 | 7.3:+29481851 | MS.gene27688:CDS |
| GAGGTGGGACCCACATGAAT+GGG | 0.527663 | 7.3:-29478847 | None:intergenic |
| GTTTGTTCCTTGTACACCAA+AGG | 0.528234 | 7.3:+29481499 | MS.gene27688:CDS |
| TACTGAGGCTTCTTCTGCCA+AGG | 0.528590 | 7.3:+29480199 | MS.gene27688:CDS |
| ACTTGCAACAAGAGAGCAGC+TGG | 0.529464 | 7.3:-29481608 | None:intergenic |
| GTCATTGGACCAACACCTCC+AGG | 0.531210 | 7.3:-29482182 | None:intergenic |
| AGAGGGCTGTTGTGATTGGC+CGG | 0.532664 | 7.3:+29481567 | MS.gene27688:CDS |
| TATCCTTGTCGGAGATAGAA+AGG | 0.534108 | 7.3:+29480322 | MS.gene27688:CDS |
| CCGCCGCCAACCCATTCATG+TGG | 0.534943 | 7.3:+29478837 | MS.gene27688:CDS |
| TTATGTGCGTAACAAGAAGA+AGG | 0.546141 | 7.3:+29480355 | MS.gene27688:CDS |
| CAGGGGTTCTCTCCCTCGCA+TGG | 0.552843 | 7.3:-29481477 | None:intergenic |
| GAGAGAACACGGGATGAAAA+GGG | 0.553021 | 7.3:-29478898 | None:intergenic |
| GTGAAGAAGCGGAGAGAGGT+GGG | 0.560425 | 7.3:-29478862 | None:intergenic |
| GGTGAAGAAGCGGAGAGAGG+TGG | 0.560471 | 7.3:-29478863 | None:intergenic |
| AAGCTGCGGGTGTGATTCCA+GGG | 0.560655 | 7.3:+29480291 | MS.gene27688:CDS |
| ACGTTTCTATCAAAGGAAAG+AGG | 0.564247 | 7.3:+29481549 | MS.gene27688:CDS |
| ACATCGATAATGACTGCGCC+GGG | 0.565680 | 7.3:-29481894 | None:intergenic |
| AGATATGACGTTTCTATCAA+AGG | 0.567646 | 7.3:+29481542 | MS.gene27688:CDS |
| TAGAAGCATACAGATGGTAA+AGG | 0.571830 | 7.3:-29480506 | None:intergenic |
| GCGGAGGAAGAGAGCAGTGG+TGG | 0.572059 | 7.3:-29478818 | None:intergenic |
| GATATCATCATCGCTGCTGT+TGG | 0.574218 | 7.3:+29481837 | MS.gene27688:CDS |
| AACACGGGATGAAAAGGGAG+AGG | 0.575552 | 7.3:-29478893 | None:intergenic |
| ATTGGTCGGCTTGCCATGCG+AGG | 0.578193 | 7.3:+29481464 | MS.gene27688:CDS |
| CTCCAGGATGAGAGAAGCTG+CGG | 0.583973 | 7.3:+29480277 | MS.gene27688:CDS |
| TGGGACCCACATGAATGGGT+TGG | 0.586060 | 7.3:-29478843 | None:intergenic |
| CGTTTCTATCAAAGGAAAGA+GGG | 0.586284 | 7.3:+29481550 | MS.gene27688:CDS |
| GACATCGATAATGACTGCGC+CGG | 0.589539 | 7.3:-29481895 | None:intergenic |
| CGCCGCCAACCCATTCATGT+GGG | 0.600739 | 7.3:+29478838 | MS.gene27688:CDS |
| ATTGGCCGGAGTAATATTGT+CGG | 0.610829 | 7.3:+29481581 | MS.gene27688:CDS |
| GGCGCAGTCATTATCGATGT+CGG | 0.611787 | 7.3:+29481897 | MS.gene27688:CDS |
| TGCAGCTGCTAGTGCTACTG+AGG | 0.614862 | 7.3:+29480184 | MS.gene27688:intron |
| AAAATCTACTCACATCTACC+GGG | 0.620212 | 7.3:-29481926 | None:intergenic |
| GCATTCCGACAATATTACTC+CGG | 0.624136 | 7.3:-29481586 | None:intergenic |
| ACAAGAATGCCATGAACCGA+AGG | 0.624279 | 7.3:-29480476 | None:intergenic |
| TTATACCAACTGAGAGAACA+CGG | 0.625277 | 7.3:-29478909 | None:intergenic |
| TGATAGAAACGTCATATCTG+TGG | 0.630007 | 7.3:-29481538 | None:intergenic |
| TCCAGGATGAGAGAAGCTGC+GGG | 0.632009 | 7.3:+29480278 | MS.gene27688:CDS |
| TATCGATGTCGGAATCAACC+CGG | 0.647996 | 7.3:+29481908 | MS.gene27688:CDS |
| TTGGTCGGCTTGCCATGCGA+GGG | 0.648401 | 7.3:+29481465 | MS.gene27688:CDS |
| CAGGATCCAAGTAGTTCTCG+AGG | 0.655807 | 7.3:+29482092 | MS.gene27688:intron |
| ACAAGGATAACAGCTAACCC+TGG | 0.656032 | 7.3:-29480308 | None:intergenic |
| TTTGGAAGTAAATTTGCCCG+AGG | 0.656152 | 7.3:+29480403 | MS.gene27688:CDS |
| AAGGGAAGCTGGATAAAACC+CGG | 0.658678 | 7.3:+29481876 | MS.gene27688:CDS |
| AGGAACAGGTGTAATAGCAG+AGG | 0.660820 | 7.3:-29482162 | None:intergenic |
| GCGGCGGAGGAAGAGAGCAG+TGG | 0.661626 | 7.3:-29478821 | None:intergenic |
| GCTATTACACCTGTTCCTGG+AGG | 0.667972 | 7.3:+29482167 | MS.gene27688:CDS |
| TGGTGTACAAGGAACAAACA+GGG | 0.668032 | 7.3:-29481495 | None:intergenic |
| GGTGATTGATGGAAAAGCGG+TGG | 0.668872 | 7.3:+29480220 | MS.gene27688:CDS |
| GAATGCTGTTAGAATCGAGA+AGG | 0.684615 | 7.3:+29481415 | MS.gene27688:CDS |
| AGTCCTTTCTATCTCCGACA+AGG | 0.687351 | 7.3:-29480325 | None:intergenic |
| CAAGGTGATTGATGGAAAAG+CGG | 0.700325 | 7.3:+29480217 | MS.gene27688:CDS |
| GGTGTACAAGGAACAAACAG+GGG | 0.708181 | 7.3:-29481494 | None:intergenic |
| TATACCAACTGAGAGAACAC+GGG | 0.709306 | 7.3:-29478908 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTCATAGAAAATACAATAT+TGG | + | chr7.3:29479832-29479851 | MS.gene27688:intron | 15.0% |
| !! | CAATATATTAAACTTAGTTA+TGG | + | chr7.3:29479911-29479930 | MS.gene27688:intron | 15.0% |
| !! | TTAAAAATGTGTTTACAATT+GGG | - | chr7.3:29480922-29480941 | None:intergenic | 15.0% |
| !! | TTCATAGAAAATACAATATT+GGG | + | chr7.3:29479833-29479852 | MS.gene27688:intron | 15.0% |
| !!! | ATAACATAAATATTTTCTTG+TGG | + | chr7.3:29481336-29481355 | MS.gene27688:intron | 15.0% |
| !! | AAAAAAAATTAGCATGGTAT+CGG | - | chr7.3:29480045-29480064 | None:intergenic | 20.0% |
| !! | ATAACGTCAAATATTCAAAT+TGG | + | chr7.3:29480812-29480831 | MS.gene27688:intron | 20.0% |
| !! | CTTAAAAATGTGTTTACAAT+TGG | - | chr7.3:29480923-29480942 | None:intergenic | 20.0% |
| !! | TTTACGTCAAATATTCAAAT+TGG | + | chr7.3:29480782-29480801 | MS.gene27688:intron | 20.0% |
| !! | TTTGACGTAAATATACAAAT+AGG | - | chr7.3:29480773-29480792 | None:intergenic | 20.0% |
| !!! | ACATTTGATGCTTAAATTTT+AGG | + | chr7.3:29482028-29482047 | MS.gene27688:intron | 20.0% |
| !!! | ATTAATTTTGCTAATCTCAA+GGG | + | chr7.3:29480635-29480654 | MS.gene27688:intron | 20.0% |
| !!! | GTTAACTAAAAATTTGAGTT+TGG | - | chr7.3:29481648-29481667 | None:intergenic | 20.0% |
| !!! | TATGTTATGAATTGAAGTTT+TGG | - | chr7.3:29481324-29481343 | None:intergenic | 20.0% |
| !!! | TATTAATTTTGCTAATCTCA+AGG | + | chr7.3:29480634-29480653 | MS.gene27688:intron | 20.0% |
| !!! | TTTTACTAATTTACGTATCA+CGG | + | chr7.3:29479315-29479334 | MS.gene27688:intron | 20.0% |
| ! | AAAAAAATTAGCATGGTATC+GGG | - | chr7.3:29480044-29480063 | None:intergenic | 25.0% |
| ! | AACTGTTGGAATAAATTCTT+TGG | + | chr7.3:29480385-29480404 | MS.gene27688:CDS | 25.0% |
| ! | AAGTCATATGTCTGAATTAA+CGG | + | chr7.3:29479687-29479706 | MS.gene27688:intron | 25.0% |
| ! | ATACCATCTATATAGAACAT+GGG | + | chr7.3:29481118-29481137 | MS.gene27688:intron | 25.0% |
| ! | CACAAACTATCAAAGAATAA+AGG | - | chr7.3:29480598-29480617 | None:intergenic | 25.0% |
| ! | GAAAATGACTTAACAGTTAA+TGG | - | chr7.3:29479186-29479205 | None:intergenic | 25.0% |
| ! | TACTTTAAATTGGATCACTT+CGG | + | chr7.3:29479550-29479569 | MS.gene27688:intron | 25.0% |
| ! | TCATATGAAAACATATACAC+AGG | - | chr7.3:29480159-29480178 | None:intergenic | 25.0% |
| ! | TCTAATTCAACCCATAAAAA+TGG | + | chr7.3:29480875-29480894 | MS.gene27688:intron | 25.0% |
| ! | TTATTGTTGAGATCTCATAT+TGG | - | chr7.3:29481229-29481248 | None:intergenic | 25.0% |
| ! | TTCTATGAATATAAGAAGCA+AGG | - | chr7.3:29479822-29479841 | None:intergenic | 25.0% |
| !! | AATGAGATTTGTTTCTTGAA+AGG | + | chr7.3:29479937-29479956 | MS.gene27688:intron | 25.0% |
| !! | ACTTAACAGTTAATGGTTTT+AGG | - | chr7.3:29479179-29479198 | None:intergenic | 25.0% |
| !! | TGTATTCATTTGAAGCAAAA+AGG | - | chr7.3:29481714-29481733 | None:intergenic | 25.0% |
| !!! | AATCATTTTAAGTTTGTGCA+TGG | + | chr7.3:29479402-29479421 | MS.gene27688:intron | 25.0% |
| !!! | ACCATGCTAATTTTTTTTTC+CGG | + | chr7.3:29480047-29480066 | MS.gene27688:intron | 25.0% |
| !!! | ATGAATTGAAGTTTTGGTTT+AGG | - | chr7.3:29481318-29481337 | None:intergenic | 25.0% |
| !!! | CTAGTTATTTATTAGCTTTC+TGG | + | chr7.3:29479582-29479601 | MS.gene27688:intron | 25.0% |
| !!! | TGTGAGTAGATTTTATTTCA+TGG | + | chr7.3:29481935-29481954 | MS.gene27688:intron | 25.0% |
| !!! | TGTGATTTGTCTAAAGTTTT+AGG | + | chr7.3:29479727-29479746 | MS.gene27688:intron | 25.0% |
| !!! | TTAATGGTTTTAGGATTATG+AGG | - | chr7.3:29479170-29479189 | None:intergenic | 25.0% |
| !!! | TTGAAGAAGTGTTTATAAGT+GGG | - | chr7.3:29481032-29481051 | None:intergenic | 25.0% |
| AAAACCTACTTAGAAAGTGA+AGG | + | chr7.3:29481162-29481181 | MS.gene27688:intron | 30.0% | |
| AAAAGTGAAGAGTAGAGTAA+AGG | - | chr7.3:29478943-29478962 | None:intergenic | 30.0% | |
| AAAATGTGTTTACAATTGGG+AGG | - | chr7.3:29480919-29480938 | None:intergenic | 30.0% | |
| AAACCAAACACACCATAAAT+AGG | + | chr7.3:29479881-29479900 | MS.gene27688:intron | 30.0% | |
| AAGGTTATGATACTAGTATG+TGG | + | chr7.3:29479456-29479475 | MS.gene27688:intron | 30.0% | |
| ACAACAATATGAGCATGAAT+GGG | - | chr7.3:29480093-29480112 | None:intergenic | 30.0% | |
| ACATACTAGTATCATAACCT+TGG | - | chr7.3:29479457-29479476 | None:intergenic | 30.0% | |
| ACCGGAAAAAAAAATTAGCA+TGG | - | chr7.3:29480051-29480070 | None:intergenic | 30.0% | |
| ACTTTAAATTGGATCACTTC+GGG | + | chr7.3:29479551-29479570 | MS.gene27688:intron | 30.0% | |
| AGATATGACGTTTCTATCAA+AGG | + | chr7.3:29481542-29481561 | MS.gene27688:CDS | 30.0% | |
| AGGTTATGATACTAGTATGT+GGG | + | chr7.3:29479457-29479476 | MS.gene27688:intron | 30.0% | |
| ATGGGAATAAATAGACACAT+AGG | - | chr7.3:29480075-29480094 | None:intergenic | 30.0% | |
| ATGTCTCATATGTTACTAGA+GGG | + | chr7.3:29481749-29481768 | MS.gene27688:intron | 30.0% | |
| CATAAATTATGAGTGCTTTG+AGG | + | chr7.3:29479608-29479627 | MS.gene27688:intron | 30.0% | |
| CATACTAGTATCATAACCTT+GGG | - | chr7.3:29479456-29479475 | None:intergenic | 30.0% | |
| GATACCATCTATATAGAACA+TGG | + | chr7.3:29481117-29481136 | MS.gene27688:intron | 30.0% | |
| GATTAATCACTAGCAAATAG+CGG | - | chr7.3:29479386-29479405 | None:intergenic | 30.0% | |
| TAAAATCTACTCACATCTAC+CGG | - | chr7.3:29481930-29481949 | None:intergenic | 30.0% | |
| TAGTTCTCGAGGTTATAAAT+TGG | + | chr7.3:29482103-29482122 | MS.gene27688:CDS | 30.0% | |
| TAGTTTATAGTATGCTGCTA+GGG | + | chr7.3:29481960-29481979 | MS.gene27688:intron | 30.0% | |
| TATGTCTCATATGTTACTAG+AGG | + | chr7.3:29481748-29481767 | MS.gene27688:intron | 30.0% | |
| TTCATCCATTGAATATTGGT+CGG | + | chr7.3:29481450-29481469 | MS.gene27688:CDS | 30.0% | |
| TTGGTTAAAGGACTGAAAAA+GGG | + | chr7.3:29479486-29479505 | MS.gene27688:intron | 30.0% | |
| ! | CAATTTAAAGTACTCCCTTT+CGG | - | chr7.3:29479542-29479561 | None:intergenic | 30.0% |
| ! | CCAAAATTTGAAATCCGAAA+GGG | + | chr7.3:29479525-29479544 | MS.gene27688:intron | 30.0% |
| ! | GGTTTTCATCCATTGAATAT+TGG | + | chr7.3:29481446-29481465 | MS.gene27688:CDS | 30.0% |
| ! | TCATTTGAAGCAAAAAGGAA+AGG | - | chr7.3:29481709-29481728 | None:intergenic | 30.0% |
| ! | TCCAAAATTTGAAATCCGAA+AGG | + | chr7.3:29479524-29479543 | MS.gene27688:intron | 30.0% |
| ! | TCTTCAAGTTACTTCTCATT+TGG | + | chr7.3:29481045-29481064 | MS.gene27688:intron | 30.0% |
| ! | TTTTTATCTTCCTTTTCCCA+AGG | + | chr7.3:29479437-29479456 | MS.gene27688:intron | 30.0% |
| !! | CAAATGGTTTTACTGTTATG+AGG | - | chr7.3:29479117-29479136 | None:intergenic | 30.0% |
| !! | CTTGAAGAAGTGTTTATAAG+TGG | - | chr7.3:29481033-29481052 | None:intergenic | 30.0% |
| !! | GCTTGTAAAGTTGATATTGT+AGG | + | chr7.3:29480007-29480026 | MS.gene27688:intron | 30.0% |
| !! | TATTGACTCCAACCTATTTA+TGG | - | chr7.3:29479896-29479915 | None:intergenic | 30.0% |
| !! | TTTTGGATATTTTGAGTGCA+TGG | + | chr7.3:29479070-29479089 | MS.gene27688:intron | 30.0% |
| !!! | ACCTTACAAGCCATTTTTAT+GGG | - | chr7.3:29480888-29480907 | None:intergenic | 30.0% |
| !!! | ATTTTGTAGAAGCATTGCAA+TGG | - | chr7.3:29482207-29482226 | None:intergenic | 30.0% |
| !!! | TTTGTGGGTTTTGAGATTTT+TGG | + | chr7.3:29479053-29479072 | MS.gene27688:intron | 30.0% |
| AAAATCTACTCACATCTACC+GGG | - | chr7.3:29481929-29481948 | None:intergenic | 35.0% | |
| AAACAAACCATGCACTCAAA+TGG | - | chr7.3:29479080-29479099 | None:intergenic | 35.0% | |
| AATAGCAGAGGCAACTTTAA+CGG | - | chr7.3:29482153-29482172 | None:intergenic | 35.0% | |
| ACAGCTATATATACAAGGGA+AGG | - | chr7.3:29480676-29480695 | None:intergenic | 35.0% | |
| ACATCCTTCACTTTCTAAGT+AGG | - | chr7.3:29481169-29481188 | None:intergenic | 35.0% | |
| ACGTTTCTATCAAAGGAAAG+AGG | + | chr7.3:29481549-29481568 | MS.gene27688:CDS | 35.0% | |
| AGCTATATATACAAGGGAAG+GGG | - | chr7.3:29480674-29480693 | None:intergenic | 35.0% | |
| AGGTTACAATGATGATCCTT+CGG | + | chr7.3:29480460-29480479 | MS.gene27688:CDS | 35.0% | |
| AGTAAAACCATTTGAGTGCA+TGG | + | chr7.3:29479123-29479142 | MS.gene27688:intron | 35.0% | |
| AGTATCATAACCTTGGGAAA+AGG | - | chr7.3:29479450-29479469 | None:intergenic | 35.0% | |
| ATAAATAGACACATAGGCAC+CGG | - | chr7.3:29480069-29480088 | None:intergenic | 35.0% | |
| CAAACACACCATAAATAGGT+TGG | + | chr7.3:29479885-29479904 | MS.gene27688:intron | 35.0% | |
| CAACAACAACTTACTCTTGT+AGG | + | chr7.3:29481270-29481289 | MS.gene27688:intron | 35.0% | |
| CAACCTATTTATGGTGTGTT+TGG | - | chr7.3:29479887-29479906 | None:intergenic | 35.0% | |
| CACAACAATATGAGCATGAA+TGG | - | chr7.3:29480094-29480113 | None:intergenic | 35.0% | |
| CAGCTATATATACAAGGGAA+GGG | - | chr7.3:29480675-29480694 | None:intergenic | 35.0% | |
| CATCATTGTAACCTGCAATA+TGG | - | chr7.3:29480454-29480473 | None:intergenic | 35.0% | |
| CCTTACAAGTCAAATTTGTG+GGG | - | chr7.3:29480997-29481016 | None:intergenic | 35.0% | |
| CGTTTCTATCAAAGGAAAGA+GGG | + | chr7.3:29481550-29481569 | MS.gene27688:CDS | 35.0% | |
| CTAGTTTATAGTATGCTGCT+AGG | + | chr7.3:29481959-29481978 | MS.gene27688:intron | 35.0% | |
| CTTGGTTAAAGGACTGAAAA+AGG | + | chr7.3:29479485-29479504 | MS.gene27688:intron | 35.0% | |
| CTTGTCTAATGATCTCTTCA+GGG | - | chr7.3:29481815-29481834 | None:intergenic | 35.0% | |
| CTTTAAATTGGATCACTTCG+GGG | + | chr7.3:29479552-29479571 | MS.gene27688:intron | 35.0% | |
| GATGACAGCAAGTTAACAAT+AGG | - | chr7.3:29479987-29480006 | None:intergenic | 35.0% | |
| GCCTTACAAGTCAAATTTGT+GGG | - | chr7.3:29480998-29481017 | None:intergenic | 35.0% | |
| GGATGAGATATGACATGAAA+GGG | - | chr7.3:29481208-29481227 | None:intergenic | 35.0% | |
| GTGCACAGCTATATATACAA+GGG | - | chr7.3:29480680-29480699 | None:intergenic | 35.0% | |
| GTTCAAAACTTCTTCTTCTG+TGG | - | chr7.3:29480432-29480451 | None:intergenic | 35.0% | |
| GTTCCAAACATGCTATAAGA+AGG | - | chr7.3:29479753-29479772 | None:intergenic | 35.0% | |
| TACAAATAGGCTAATCACAC+AGG | - | chr7.3:29480760-29480779 | None:intergenic | 35.0% | |
| TACGTATCACGGAACAATAA+CGG | + | chr7.3:29479326-29479345 | MS.gene27688:intron | 35.0% | |
| TCTCGAGGTTATAAATTGGT+TGG | + | chr7.3:29482107-29482126 | MS.gene27688:CDS | 35.0% | |
| TGATAGAAACGTCATATCTG+TGG | - | chr7.3:29481541-29481560 | None:intergenic | 35.0% | |
| TGCCTTACAAGTCAAATTTG+TGG | - | chr7.3:29480999-29481018 | None:intergenic | 35.0% | |
| TGGATGAGATATGACATGAA+AGG | - | chr7.3:29481209-29481228 | None:intergenic | 35.0% | |
| TGTCAAATAGTGACAACAGA+AGG | - | chr7.3:29479282-29479301 | None:intergenic | 35.0% | |
| TGTGCACAGCTATATATACA+AGG | - | chr7.3:29480681-29480700 | None:intergenic | 35.0% | |
| TTATAACCTCGAGAACTACT+TGG | - | chr7.3:29482101-29482120 | None:intergenic | 35.0% | |
| TTATACCAACTGAGAGAACA+CGG | - | chr7.3:29478912-29478931 | None:intergenic | 35.0% | |
| TTATGTGCGTAACAAGAAGA+AGG | + | chr7.3:29480355-29480374 | MS.gene27688:CDS | 35.0% | |
| TTTGTTCCTTGTACACCAAA+GGG | + | chr7.3:29481500-29481519 | MS.gene27688:CDS | 35.0% | |
| ! | AAAAATGGCTTGTAAGGTGA+GGG | + | chr7.3:29480890-29480909 | MS.gene27688:intron | 35.0% |
| ! | ACCCATAAAAATGGCTTGTA+AGG | + | chr7.3:29480884-29480903 | MS.gene27688:intron | 35.0% |
| ! | CACTTTCTAAGTAGGTTTTG+TGG | - | chr7.3:29481161-29481180 | None:intergenic | 35.0% |
| ! | CCCTTTCGGATTTCAAATTT+TGG | - | chr7.3:29479528-29479547 | None:intergenic | 35.0% |
| ! | TAAAAATGGCTTGTAAGGTG+AGG | + | chr7.3:29480889-29480908 | MS.gene27688:intron | 35.0% |
| ! | TAGAAGCATACAGATGGTAA+AGG | - | chr7.3:29480509-29480528 | None:intergenic | 35.0% |
| ! | TCTGAGTTTGTACTGTTTCT+AGG | + | chr7.3:29481988-29482007 | MS.gene27688:intron | 35.0% |
| !! | CGAAAGGGAGTACTTTAAAT+TGG | + | chr7.3:29479540-29479559 | MS.gene27688:intron | 35.0% |
| !!! | ACTCTTCACTTTTTAGCTTC+TGG | + | chr7.3:29478950-29478969 | MS.gene27688:intron | 35.0% |
| !!! | CACCTTACAAGCCATTTTTA+TGG | - | chr7.3:29480889-29480908 | None:intergenic | 35.0% |
| !!! | CTCTTCACTTTTTAGCTTCT+GGG | + | chr7.3:29478951-29478970 | MS.gene27688:intron | 35.0% |
| !!! | GAAGTTTTGAACCATATTGC+AGG | + | chr7.3:29480440-29480459 | MS.gene27688:CDS | 35.0% |
| AAGAAGGCTTGTGAAACTGT+TGG | + | chr7.3:29480371-29480390 | MS.gene27688:CDS | 40.0% | |
| AAGCCTGTCCGATATCTATT+AGG | - | chr7.3:29481096-29481115 | None:intergenic | 40.0% | |
| AAGGGTGGCCTAATAGATAT+CGG | + | chr7.3:29481085-29481104 | MS.gene27688:intron | 40.0% | |
| AATCTCAAGGGATTCCAGTA+AGG | + | chr7.3:29480647-29480666 | MS.gene27688:intron | 40.0% | |
| AATGATGATCCTTCGGTTCA+TGG | + | chr7.3:29480467-29480486 | MS.gene27688:CDS | 40.0% | |
| ACACTGCATCCACTTCAATT+TGG | + | chr7.3:29479641-29479660 | MS.gene27688:intron | 40.0% | |
| AGAATCGAGAAGGATGTAGA+TGG | + | chr7.3:29481425-29481444 | MS.gene27688:CDS | 40.0% | |
| AGGCCTTCTTATAGCATGTT+TGG | + | chr7.3:29479747-29479766 | MS.gene27688:intron | 40.0% | |
| ATTGGCCGGAGTAATATTGT+CGG | + | chr7.3:29481581-29481600 | MS.gene27688:CDS | 40.0% | |
| CAAGGTGATTGATGGAAAAG+CGG | + | chr7.3:29480217-29480236 | MS.gene27688:CDS | 40.0% | |
| CCACCCATGTTCTATATAGA+TGG | - | chr7.3:29481124-29481143 | None:intergenic | 40.0% | |
| CCATCTATATAGAACATGGG+TGG | + | chr7.3:29481121-29481140 | MS.gene27688:intron | 40.0% | |
| CTCTTTCTTGTGTTTGTGAC+AGG | + | chr7.3:29482073-29482092 | MS.gene27688:intron | 40.0% | |
| GAATGCTGTTAGAATCGAGA+AGG | + | chr7.3:29481415-29481434 | MS.gene27688:CDS | 40.0% | |
| GCATTCCGACAATATTACTC+CGG | - | chr7.3:29481589-29481608 | None:intergenic | 40.0% | |
| GCTTGTCTAATGATCTCTTC+AGG | - | chr7.3:29481816-29481835 | None:intergenic | 40.0% | |
| GTTTGTTCCTTGTACACCAA+AGG | + | chr7.3:29481499-29481518 | MS.gene27688:CDS | 40.0% | |
| TATACCAACTGAGAGAACAC+GGG | - | chr7.3:29478911-29478930 | None:intergenic | 40.0% | |
| TATCCTTGTCGGAGATAGAA+AGG | + | chr7.3:29480322-29480341 | MS.gene27688:CDS | 40.0% | |
| TCTATATAGAACATGGGTGG+AGG | + | chr7.3:29481124-29481143 | MS.gene27688:intron | 40.0% | |
| TGGTGTACAAGGAACAAACA+GGG | - | chr7.3:29481498-29481517 | None:intergenic | 40.0% | |
| TTCCCTTAACCATGTTTGGT+TGG | - | chr7.3:29481863-29481882 | None:intergenic | 40.0% | |
| TTCTTCTTCTGTGGAATCCT+CGG | - | chr7.3:29480423-29480442 | None:intergenic | 40.0% | |
| TTGGTGTACAAGGAACAAAC+AGG | - | chr7.3:29481499-29481518 | None:intergenic | 40.0% | |
| TTTGGAAGTAAATTTGCCCG+AGG | + | chr7.3:29480403-29480422 | MS.gene27688:CDS | 40.0% | |
| ! | AAAATGGCTTGTAAGGTGAG+GGG | + | chr7.3:29480891-29480910 | MS.gene27688:intron | 40.0% |
| ! | AGTAGTTCTATGCATCCCTT+TGG | - | chr7.3:29481518-29481537 | None:intergenic | 40.0% |
| ! | GAGAACTAGAAGCATACAGA+TGG | - | chr7.3:29480515-29480534 | None:intergenic | 40.0% |
| !! | AGAAGCATTGCAATGGTCAT+TGG | - | chr7.3:29482200-29482219 | None:intergenic | 40.0% |
| !! | ATACGCGAATGAAAGGCATT+TGG | - | chr7.3:29479781-29479800 | None:intergenic | 40.0% |
| !! | CCCCACAAATTTGACTTGTA+AGG | + | chr7.3:29480994-29481013 | MS.gene27688:intron | 40.0% |
| !!! | TGAGTGCTTTGAGGTGTTTT+CGG | + | chr7.3:29479617-29479636 | MS.gene27688:intron | 40.0% |
| AAGGGAAGCTGGATAAAACC+CGG | + | chr7.3:29481876-29481895 | MS.gene27688:CDS | 45.0% | |
| ACAAGAATGCCATGAACCGA+AGG | - | chr7.3:29480479-29480498 | None:intergenic | 45.0% | |
| ACAAGGATAACAGCTAACCC+TGG | - | chr7.3:29480311-29480330 | None:intergenic | 45.0% | |
| AGATAGCAGTTGAAGTCTCC+AGG | + | chr7.3:29480261-29480280 | MS.gene27688:CDS | 45.0% | |
| AGGAACAGGTGTAATAGCAG+AGG | - | chr7.3:29482165-29482184 | None:intergenic | 45.0% | |
| AGGAGTGAATGGTGAAGAAG+CGG | - | chr7.3:29478876-29478895 | None:intergenic | 45.0% | |
| AGTCCTTTCTATCTCCGACA+AGG | - | chr7.3:29480328-29480347 | None:intergenic | 45.0% | |
| CAAACATGGTTAAGGGAAGC+TGG | + | chr7.3:29481865-29481884 | MS.gene27688:CDS | 45.0% | |
| CAGCTTCCCTTAACCATGTT+TGG | - | chr7.3:29481867-29481886 | None:intergenic | 45.0% | |
| CTATTAGGCCACCCTTTATC+AGG | - | chr7.3:29481081-29481100 | None:intergenic | 45.0% | |
| GACCTGAGTAGCCTGATAAA+GGG | + | chr7.3:29481067-29481086 | MS.gene27688:intron | 45.0% | |
| GAGAGAACACGGGATGAAAA+GGG | - | chr7.3:29478901-29478920 | None:intergenic | 45.0% | |
| GATATCATCATCGCTGCTGT+TGG | + | chr7.3:29481837-29481856 | MS.gene27688:CDS | 45.0% | |
| GCAAGCCGACCAATATTCAA+TGG | - | chr7.3:29481458-29481477 | None:intergenic | 45.0% | |
| GCAATCTGAGTGACAAGACT+AGG | - | chr7.3:29479211-29479230 | None:intergenic | 45.0% | |
| GGCCAACCAAACATGGTTAA+GGG | + | chr7.3:29481858-29481877 | MS.gene27688:CDS | 45.0% | |
| GGTGTACAAGGAACAAACAG+GGG | - | chr7.3:29481497-29481516 | None:intergenic | 45.0% | |
| TATCGATGTCGGAATCAACC+CGG | + | chr7.3:29481908-29481927 | MS.gene27688:CDS | 45.0% | |
| TCTGCTATTACACCTGTTCC+TGG | + | chr7.3:29482164-29482183 | MS.gene27688:CDS | 45.0% | |
| TCTTCTGCCAAGGTGATTGA+TGG | + | chr7.3:29480209-29480228 | MS.gene27688:CDS | 45.0% | |
| TCTTCTTCTGTGGAATCCTC+GGG | - | chr7.3:29480422-29480441 | None:intergenic | 45.0% | |
| TGAAAAGGGAGAGGAGTGAA+TGG | - | chr7.3:29478887-29478906 | None:intergenic | 45.0% | |
| TGAGAGAACACGGGATGAAA+AGG | - | chr7.3:29478902-29478921 | None:intergenic | 45.0% | |
| TGGCCAACCAAACATGGTTA+AGG | + | chr7.3:29481857-29481876 | MS.gene27688:CDS | 45.0% | |
| TGGCCTAATAGATATCGGAC+AGG | + | chr7.3:29481090-29481109 | MS.gene27688:intron | 45.0% | |
| ! | ATGCATCCCTTTGGTGTACA+AGG | - | chr7.3:29481509-29481528 | None:intergenic | 45.0% |
| ! | CGCTTTTCCATCAATCACCT+TGG | - | chr7.3:29480219-29480238 | None:intergenic | 45.0% |
| ! | CTCTTCAGGGTTAGTAGTTC+TGG | - | chr7.3:29481802-29481821 | None:intergenic | 45.0% |
| ! | GCGTGCTATTCAGCAGAAAA+AGG | + | chr7.3:29480124-29480143 | MS.gene27688:intron | 45.0% |
| !! | CGAATGAAAGGCATTTGGAC+GGG | - | chr7.3:29479776-29479795 | None:intergenic | 45.0% |
| !! | GAATGAAAGGCATTTGGACG+GGG | - | chr7.3:29479775-29479794 | None:intergenic | 45.0% |
| !! | GCGAATGAAAGGCATTTGGA+CGG | - | chr7.3:29479777-29479796 | None:intergenic | 45.0% |
| !! | GGGTTAGCTGTTATCCTTGT+CGG | + | chr7.3:29480311-29480330 | MS.gene27688:CDS | 45.0% |
| !!! | ATTTTTTTTTTTTTTTTTTG+TGG | + | chr7.3:29479037-29479056 | MS.gene27688:intron | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTTGT+GGG | + | chr7.3:29479038-29479057 | MS.gene27688:intron | 5.0% |
| AACACGGGATGAAAAGGGAG+AGG | - | chr7.3:29478896-29478915 | None:intergenic | 50.0% | |
| AATGGTGAAGAAGCGGAGAG+AGG | - | chr7.3:29478869-29478888 | None:intergenic | 50.0% | |
| ACATCGATAATGACTGCGCC+GGG | - | chr7.3:29481897-29481916 | None:intergenic | 50.0% | |
| ACTTGCAACAAGAGAGCAGC+TGG | - | chr7.3:29481611-29481630 | None:intergenic | 50.0% | |
| ATCCACTTCAATTTGGCCGC+GGG | + | chr7.3:29479648-29479667 | MS.gene27688:intron | 50.0% | |
| CACCCTTTATCAGGCTACTC+AGG | - | chr7.3:29481072-29481091 | None:intergenic | 50.0% | |
| CAGGATCCAAGTAGTTCTCG+AGG | + | chr7.3:29482092-29482111 | MS.gene27688:intron | 50.0% | |
| CATCCACTTCAATTTGGCCG+CGG | + | chr7.3:29479647-29479666 | MS.gene27688:intron | 50.0% | |
| CCTTTCATTCGCGTATCCAG+CGG | + | chr7.3:29479785-29479804 | MS.gene27688:intron | 50.0% | |
| CTGAGTAGCCTGATAAAGGG+TGG | + | chr7.3:29481070-29481089 | MS.gene27688:intron | 50.0% | |
| CTTACACTAACACCAACCCG+CGG | - | chr7.3:29479667-29479686 | None:intergenic | 50.0% | |
| GACATCGATAATGACTGCGC+CGG | - | chr7.3:29481898-29481917 | None:intergenic | 50.0% | |
| GCTATTACACCTGTTCCTGG+AGG | + | chr7.3:29482167-29482186 | MS.gene27688:CDS | 50.0% | |
| GGAAAGAGGGCTGTTGTGAT+TGG | + | chr7.3:29481563-29481582 | MS.gene27688:CDS | 50.0% | |
| GGACCTGAGTAGCCTGATAA+AGG | + | chr7.3:29481066-29481085 | MS.gene27688:intron | 50.0% | |
| GGCGCAGTCATTATCGATGT+CGG | + | chr7.3:29481897-29481916 | MS.gene27688:CDS | 50.0% | |
| GGTGATTGATGGAAAAGCGG+TGG | + | chr7.3:29480220-29480239 | MS.gene27688:CDS | 50.0% | |
| TACTGAGGCTTCTTCTGCCA+AGG | + | chr7.3:29480199-29480218 | MS.gene27688:CDS | 50.0% | |
| TCATCCCGTGTTCTCTCAGT+TGG | + | chr7.3:29478904-29478923 | MS.gene27688:CDS | 50.0% | |
| TGCTGTTGGCCAACCAAACA+TGG | + | chr7.3:29481851-29481870 | MS.gene27688:CDS | 50.0% | |
| TTCTGCTGAATAGCACGCAG+AGG | - | chr7.3:29480122-29480141 | None:intergenic | 50.0% | |
| ! | GGTGTGTTTGGTTTCGCGTT+TGG | - | chr7.3:29479875-29479894 | None:intergenic | 50.0% |
| !! | AAGAGAGCAGTGGTGGATGA+AGG | - | chr7.3:29478814-29478833 | None:intergenic | 50.0% |
| !! | ACTAGTATGTGGGAAGCGCT+TGG | + | chr7.3:29479467-29479486 | MS.gene27688:intron | 50.0% |
| !! | TGTGGGAAGCGCTTGGTTAA+AGG | + | chr7.3:29479474-29479493 | MS.gene27688:intron | 50.0% |
| AACCCGCGGCCAAATTGAAG+TGG | - | chr7.3:29479653-29479672 | None:intergenic | 55.0% | |
| AAGCTGCGGGTGTGATTCCA+GGG | + | chr7.3:29480291-29480310 | MS.gene27688:CDS | 55.0% | |
| ACAAGGGAAGGGGACCTTAC+TGG | - | chr7.3:29480664-29480683 | None:intergenic | 55.0% | |
| ACTTCAATTTGGCCGCGGGT+TGG | + | chr7.3:29479652-29479671 | MS.gene27688:intron | 55.0% | |
| AGAGGGCTGTTGTGATTGGC+CGG | + | chr7.3:29481567-29481586 | MS.gene27688:CDS | 55.0% | |
| AGAGGTGGGACCCACATGAA+TGG | - | chr7.3:29478851-29478870 | None:intergenic | 55.0% | |
| CAAGGTTTCCTAGCTTCCGC+TGG | - | chr7.3:29479804-29479823 | None:intergenic | 55.0% | |
| CCGCTGGATACGCGAATGAA+AGG | - | chr7.3:29479788-29479807 | None:intergenic | 55.0% | |
| CTCCAGGATGAGAGAAGCTG+CGG | + | chr7.3:29480277-29480296 | MS.gene27688:CDS | 55.0% | |
| GAGGTGGGACCCACATGAAT+GGG | - | chr7.3:29478850-29478869 | None:intergenic | 55.0% | |
| GTCATTGGACCAACACCTCC+AGG | - | chr7.3:29482185-29482204 | None:intergenic | 55.0% | |
| GTGAAGAAGCGGAGAGAGGT+GGG | - | chr7.3:29478865-29478884 | None:intergenic | 55.0% | |
| TCCAGGATGAGAGAAGCTGC+GGG | + | chr7.3:29480278-29480297 | MS.gene27688:CDS | 55.0% | |
| TGGGACCCACATGAATGGGT+TGG | - | chr7.3:29478846-29478865 | None:intergenic | 55.0% | |
| ! | ACACCTGTTCCTGGAGGTGT+TGG | + | chr7.3:29482173-29482192 | MS.gene27688:CDS | 55.0% |
| ! | TGCAGCTGCTAGTGCTACTG+AGG | + | chr7.3:29480184-29480203 | MS.gene27688:intron | 55.0% |
| !! | GACCCACATGAATGGGTTGG+CGG | - | chr7.3:29478843-29478862 | None:intergenic | 55.0% |
| ACCCGCAGCTTCTCTCATCC+TGG | - | chr7.3:29480282-29480301 | None:intergenic | 60.0% | |
| CGCCGCCAACCCATTCATGT+GGG | + | chr7.3:29478838-29478857 | MS.gene27688:CDS | 60.0% | |
| GAAGCTGCGGGTGTGATTCC+AGG | + | chr7.3:29480290-29480309 | MS.gene27688:CDS | 60.0% | |
| GGACCAACACCTCCAGGAAC+AGG | - | chr7.3:29482179-29482198 | None:intergenic | 60.0% | |
| GGTGAAGAAGCGGAGAGAGG+TGG | - | chr7.3:29478866-29478885 | None:intergenic | 60.0% | |
| TCGCGTATCCAGCGGAAGCT+AGG | + | chr7.3:29479793-29479812 | MS.gene27688:intron | 60.0% | |
| !! | ATTGGTCGGCTTGCCATGCG+AGG | + | chr7.3:29481464-29481483 | MS.gene27688:CDS | 60.0% |
| !! | CCACATGAATGGGTTGGCGG+CGG | - | chr7.3:29478840-29478859 | None:intergenic | 60.0% |
| !! | TTGGTCGGCTTGCCATGCGA+GGG | + | chr7.3:29481465-29481484 | MS.gene27688:CDS | 60.0% |
| CAGGGGTTCTCTCCCTCGCA+TGG | - | chr7.3:29481480-29481499 | None:intergenic | 65.0% | |
| CCGCCGCCAACCCATTCATG+TGG | + | chr7.3:29478837-29478856 | MS.gene27688:CDS | 65.0% | |
| GCGGAGGAAGAGAGCAGTGG+TGG | - | chr7.3:29478821-29478840 | None:intergenic | 65.0% | |
| !! | CATGAATGGGTTGGCGGCGG+AGG | - | chr7.3:29478837-29478856 | None:intergenic | 65.0% |
| GCGGCGGAGGAAGAGAGCAG+TGG | - | chr7.3:29478824-29478843 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 29478775 | 29482265 | 29478775 | ID=MS.gene27688 |
| chr7.3 | mRNA | 29478775 | 29482265 | 29478775 | ID=MS.gene27688.t1;Parent=MS.gene27688 |
| chr7.3 | exon | 29478775 | 29478925 | 29478775 | ID=MS.gene27688.t1.exon1;Parent=MS.gene27688.t1 |
| chr7.3 | CDS | 29478775 | 29478925 | 29478775 | ID=cds.MS.gene27688.t1;Parent=MS.gene27688.t1 |
| chr7.3 | exon | 29480189 | 29480517 | 29480189 | ID=MS.gene27688.t1.exon2;Parent=MS.gene27688.t1 |
| chr7.3 | CDS | 29480189 | 29480517 | 29480189 | ID=cds.MS.gene27688.t1;Parent=MS.gene27688.t1 |
| chr7.3 | exon | 29481392 | 29481628 | 29481392 | ID=MS.gene27688.t1.exon3;Parent=MS.gene27688.t1 |
| chr7.3 | CDS | 29481392 | 29481628 | 29481392 | ID=cds.MS.gene27688.t1;Parent=MS.gene27688.t1 |
| chr7.3 | exon | 29481768 | 29481935 | 29481768 | ID=MS.gene27688.t1.exon4;Parent=MS.gene27688.t1 |
| chr7.3 | CDS | 29481768 | 29481935 | 29481768 | ID=cds.MS.gene27688.t1;Parent=MS.gene27688.t1 |
| chr7.3 | exon | 29482095 | 29482265 | 29482095 | ID=MS.gene27688.t1.exon5;Parent=MS.gene27688.t1 |
| chr7.3 | CDS | 29482095 | 29482265 | 29482095 | ID=cds.MS.gene27688.t1;Parent=MS.gene27688.t1 |
| Gene Sequence |
| Protein sequence |
