Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33587.t1 | XP_003589595.2 | 98.6 | 279 | 4 | 0 | 1 | 279 | 78 | 356 | 1.40E-151 | 546.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33587.t1 | A2RVV7 | 71.7 | 279 | 79 | 0 | 1 | 279 | 71 | 349 | 4.4e-114 | 412.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33587.t1 | G7I8G5 | 98.6 | 279 | 4 | 0 | 1 | 279 | 78 | 356 | 1.0e-151 | 546.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene33587 | MS.gene84986 | PPI |
MS.gene33587 | MS.gene028078 | PPI |
MS.gene33587 | MS.gene52204 | PPI |
MS.gene33587 | MS.gene72831 | PPI |
MS.gene33587 | MS.gene070084 | PPI |
MS.gene33587 | MS.gene07116 | PPI |
MS.gene33587 | MS.gene27688 | PPI |
MS.gene33587 | MS.gene06972 | PPI |
MS.gene33587 | MS.gene028080 | PPI |
MS.gene33587 | MS.gene22986 | PPI |
MS.gene33587 | MS.gene023835 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33587.t1 | MTR_1g030450 | 98.566 | 279 | 4 | 0 | 1 | 279 | 78 | 356 | 0.0 | 561 |
MS.gene33587.t1 | MTR_7g076680 | 63.082 | 279 | 103 | 0 | 1 | 279 | 85 | 363 | 4.02e-127 | 372 |
MS.gene33587.t1 | MTR_7g076680 | 63.082 | 279 | 103 | 0 | 1 | 279 | 68 | 346 | 5.12e-127 | 372 |
MS.gene33587.t1 | MTR_7g076680 | 63.082 | 279 | 103 | 0 | 1 | 279 | 64 | 342 | 2.03e-126 | 370 |
MS.gene33587.t1 | MTR_3g007490 | 59.857 | 279 | 111 | 1 | 1 | 279 | 81 | 358 | 8.80e-123 | 361 |
MS.gene33587.t1 | MTR_7g108580 | 60.498 | 281 | 111 | 0 | 1 | 281 | 10 | 290 | 1.18e-120 | 353 |
MS.gene33587.t1 | MTR_1g030440 | 91.975 | 162 | 12 | 1 | 276 | 437 | 7 | 167 | 2.21e-101 | 299 |
MS.gene33587.t1 | MTR_3g088655 | 64.968 | 157 | 48 | 3 | 284 | 433 | 1 | 157 | 4.94e-57 | 185 |
MS.gene33587.t1 | MTR_3g007580 | 53.774 | 106 | 42 | 2 | 120 | 224 | 15 | 114 | 1.96e-29 | 112 |
MS.gene33587.t1 | MTR_4g067270 | 36.184 | 152 | 78 | 3 | 287 | 430 | 1 | 141 | 1.61e-19 | 85.1 |
MS.gene33587.t1 | MTR_7g074240 | 35.256 | 156 | 92 | 3 | 286 | 433 | 19 | 173 | 4.07e-19 | 85.1 |
MS.gene33587.t1 | MTR_8g105230 | 35.172 | 145 | 77 | 3 | 289 | 427 | 34 | 167 | 1.02e-17 | 81.3 |
MS.gene33587.t1 | MTR_3g067610 | 33.333 | 150 | 79 | 3 | 287 | 430 | 1 | 135 | 3.01e-17 | 78.6 |
MS.gene33587.t1 | MTR_1g046950 | 36.054 | 147 | 79 | 3 | 290 | 430 | 3 | 140 | 1.33e-15 | 73.9 |
MS.gene33587.t1 | MTR_1g047100 | 32.653 | 147 | 83 | 2 | 290 | 430 | 3 | 139 | 1.62e-15 | 73.6 |
MS.gene33587.t1 | MTR_2g098890 | 36.242 | 149 | 78 | 3 | 290 | 430 | 63 | 202 | 2.01e-15 | 75.5 |
MS.gene33587.t1 | MTR_5g079340 | 34.014 | 147 | 79 | 3 | 290 | 430 | 3 | 137 | 4.83e-15 | 72.4 |
MS.gene33587.t1 | MTR_1g032070 | 29.064 | 203 | 115 | 5 | 235 | 431 | 2 | 181 | 2.01e-14 | 72.0 |
MS.gene33587.t1 | MTR_7g089760 | 34.211 | 152 | 81 | 3 | 287 | 430 | 1 | 141 | 4.80e-14 | 69.7 |
MS.gene33587.t1 | MTR_6g023460 | 34.965 | 143 | 75 | 3 | 295 | 431 | 12 | 142 | 6.06e-14 | 69.3 |
MS.gene33587.t1 | MTR_8g066630 | 34.722 | 144 | 78 | 3 | 290 | 426 | 16 | 150 | 8.71e-14 | 69.3 |
MS.gene33587.t1 | MTR_5g092810 | 32.704 | 159 | 85 | 5 | 287 | 436 | 390 | 535 | 1.52e-13 | 72.8 |
MS.gene33587.t1 | MTR_6g079570 | 34.899 | 149 | 76 | 5 | 290 | 430 | 25 | 160 | 2.35e-13 | 68.6 |
MS.gene33587.t1 | MTR_4g115170 | 32.044 | 181 | 100 | 4 | 271 | 430 | 38 | 216 | 5.45e-13 | 68.6 |
MS.gene33587.t1 | MTR_7g075040 | 36.364 | 154 | 78 | 7 | 289 | 430 | 45 | 190 | 7.24e-13 | 67.4 |
MS.gene33587.t1 | MTR_8g107110 | 31.915 | 141 | 90 | 1 | 290 | 430 | 23 | 157 | 9.63e-13 | 66.6 |
MS.gene33587.t1 | MTR_4g086260 | 27.907 | 172 | 114 | 3 | 266 | 437 | 35 | 196 | 9.73e-13 | 67.0 |
MS.gene33587.t1 | MTR_5g017510 | 32.639 | 144 | 88 | 4 | 290 | 431 | 47 | 183 | 7.77e-12 | 64.3 |
MS.gene33587.t1 | MTR_5g017560 | 32.639 | 144 | 88 | 4 | 290 | 431 | 47 | 183 | 7.77e-12 | 64.3 |
MS.gene33587.t1 | MTR_4g112460 | 30.612 | 147 | 87 | 3 | 290 | 430 | 10 | 147 | 8.58e-12 | 63.9 |
MS.gene33587.t1 | MTR_3g051770 | 30.625 | 160 | 87 | 4 | 283 | 430 | 380 | 527 | 1.56e-11 | 66.6 |
MS.gene33587.t1 | MTR_3g083470 | 30.769 | 143 | 84 | 4 | 290 | 432 | 92 | 219 | 1.76e-11 | 64.3 |
MS.gene33587.t1 | MTR_5g009830 | 32.414 | 145 | 79 | 4 | 292 | 430 | 372 | 503 | 1.95e-11 | 66.2 |
MS.gene33587.t1 | MTR_8g099095 | 31.724 | 145 | 80 | 4 | 292 | 430 | 372 | 503 | 1.99e-11 | 66.2 |
MS.gene33587.t1 | MTR_5g017550 | 31.081 | 148 | 84 | 5 | 290 | 431 | 47 | 182 | 2.12e-11 | 63.2 |
MS.gene33587.t1 | MTR_8g036075 | 32.051 | 156 | 91 | 5 | 289 | 435 | 47 | 196 | 2.14e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33587.t1 | AT2G38660 | 71.685 | 279 | 79 | 0 | 1 | 279 | 71 | 349 | 4.02e-146 | 420 |
MS.gene33587.t1 | AT2G38660 | 71.685 | 279 | 79 | 0 | 1 | 279 | 71 | 349 | 4.02e-146 | 420 |
MS.gene33587.t1 | AT4G00620 | 64.158 | 279 | 100 | 0 | 1 | 279 | 77 | 355 | 5.89e-130 | 379 |
MS.gene33587.t1 | AT2G38660 | 70.968 | 248 | 72 | 0 | 1 | 248 | 71 | 318 | 2.00e-127 | 372 |
MS.gene33587.t1 | AT3G12290 | 60.573 | 279 | 110 | 0 | 1 | 279 | 17 | 295 | 7.74e-119 | 349 |
MS.gene33587.t1 | AT4G00600 | 60.426 | 235 | 92 | 1 | 46 | 279 | 71 | 305 | 1.86e-99 | 300 |
MS.gene33587.t1 | AT2G38660 | 70.930 | 172 | 50 | 0 | 1 | 172 | 71 | 242 | 4.11e-83 | 255 |
MS.gene33587.t1 | AT2G38660 | 64.516 | 93 | 33 | 0 | 1 | 93 | 71 | 163 | 4.54e-35 | 129 |
MS.gene33587.t1 | AT2G38660 | 64.516 | 93 | 33 | 0 | 1 | 93 | 71 | 163 | 4.54e-35 | 129 |
MS.gene33587.t1 | AT2G38660 | 64.516 | 93 | 33 | 0 | 1 | 93 | 71 | 163 | 4.54e-35 | 129 |
MS.gene33587.t1 | AT2G38660 | 64.516 | 93 | 33 | 0 | 1 | 93 | 71 | 163 | 4.54e-35 | 129 |
MS.gene33587.t1 | AT1G21550 | 45.638 | 149 | 76 | 4 | 287 | 431 | 6 | 153 | 9.17e-30 | 113 |
MS.gene33587.t1 | AT4G20780 | 40.909 | 154 | 76 | 4 | 292 | 430 | 30 | 183 | 1.72e-23 | 97.8 |
MS.gene33587.t1 | AT2G43290 | 37.584 | 149 | 79 | 4 | 290 | 430 | 64 | 206 | 2.62e-19 | 86.7 |
MS.gene33587.t1 | AT5G44460 | 41.060 | 151 | 82 | 3 | 287 | 430 | 24 | 174 | 8.23e-19 | 84.3 |
MS.gene33587.t1 | AT1G24620 | 35.526 | 152 | 81 | 3 | 291 | 436 | 37 | 177 | 2.70e-17 | 80.1 |
MS.gene33587.t1 | AT1G05990 | 35.811 | 148 | 77 | 3 | 291 | 430 | 5 | 142 | 1.52e-16 | 77.0 |
MS.gene33587.t1 | AT5G37770 | 30.435 | 161 | 99 | 2 | 276 | 430 | 2 | 155 | 5.26e-16 | 75.9 |
MS.gene33587.t1 | AT5G37770 | 30.435 | 161 | 99 | 2 | 276 | 430 | 2 | 155 | 5.26e-16 | 75.9 |
MS.gene33587.t1 | AT3G59440 | 37.162 | 148 | 73 | 4 | 291 | 430 | 51 | 186 | 5.98e-16 | 76.6 |
MS.gene33587.t1 | AT4G03290 | 33.553 | 152 | 85 | 3 | 287 | 430 | 1 | 144 | 3.69e-15 | 73.2 |
MS.gene33587.t1 | AT4G04710 | 35.172 | 145 | 75 | 4 | 292 | 430 | 338 | 469 | 4.00e-15 | 77.8 |
MS.gene33587.t1 | AT4G04710 | 35.172 | 145 | 75 | 4 | 292 | 430 | 324 | 455 | 4.05e-15 | 77.8 |
MS.gene33587.t1 | AT4G04710 | 35.172 | 145 | 75 | 4 | 292 | 430 | 351 | 482 | 4.29e-15 | 77.8 |
MS.gene33587.t1 | AT4G04710 | 34.694 | 147 | 75 | 4 | 292 | 430 | 351 | 484 | 7.26e-15 | 77.0 |
MS.gene33587.t1 | AT1G66400 | 28.571 | 161 | 100 | 2 | 279 | 433 | 3 | 154 | 3.93e-14 | 70.1 |
MS.gene33587.t1 | AT1G73630 | 30.345 | 145 | 92 | 1 | 286 | 430 | 15 | 150 | 1.08e-13 | 69.3 |
MS.gene33587.t1 | AT4G12860 | 31.579 | 152 | 85 | 3 | 287 | 430 | 1 | 141 | 2.68e-13 | 67.8 |
MS.gene33587.t1 | AT3G07490 | 35.135 | 148 | 77 | 3 | 291 | 430 | 5 | 141 | 4.67e-13 | 67.0 |
MS.gene33587.t1 | AT4G23650 | 34.483 | 145 | 76 | 4 | 292 | 430 | 384 | 515 | 5.14e-13 | 71.2 |
MS.gene33587.t1 | AT1G76640 | 29.940 | 167 | 102 | 2 | 270 | 430 | 1 | 158 | 6.78e-13 | 66.6 |
MS.gene33587.t1 | AT1G18530 | 34.722 | 144 | 83 | 3 | 291 | 430 | 7 | 143 | 6.95e-13 | 66.6 |
MS.gene33587.t1 | AT4G04695 | 32.903 | 155 | 85 | 4 | 282 | 430 | 327 | 468 | 1.25e-12 | 70.1 |
MS.gene33587.t1 | AT1G32250 | 33.566 | 143 | 84 | 2 | 290 | 426 | 15 | 152 | 1.41e-12 | 66.2 |
MS.gene33587.t1 | AT4G04700 | 32.258 | 155 | 86 | 4 | 282 | 430 | 327 | 468 | 3.04e-12 | 68.9 |
MS.gene33587.t1 | AT1G76650 | 34.459 | 148 | 79 | 3 | 289 | 430 | 41 | 176 | 3.73e-12 | 65.1 |
MS.gene33587.t1 | AT1G76650 | 34.459 | 148 | 79 | 3 | 289 | 430 | 41 | 176 | 3.73e-12 | 65.1 |
MS.gene33587.t1 | AT5G42380 | 34.028 | 144 | 91 | 1 | 287 | 430 | 45 | 184 | 8.57e-12 | 64.3 |
MS.gene33587.t1 | AT2G15680 | 30.496 | 141 | 91 | 1 | 290 | 430 | 49 | 182 | 9.06e-12 | 64.3 |
MS.gene33587.t1 | AT1G18210 | 28.659 | 164 | 92 | 3 | 275 | 430 | 7 | 153 | 1.32e-11 | 63.5 |
MS.gene33587.t1 | AT1G18210 | 28.659 | 164 | 92 | 3 | 275 | 430 | 7 | 153 | 1.32e-11 | 63.5 |
MS.gene33587.t1 | AT5G17470 | 30.986 | 142 | 83 | 4 | 295 | 430 | 6 | 138 | 2.50e-11 | 62.0 |
MS.gene33587.t1 | AT2G36180 | 33.566 | 143 | 79 | 4 | 295 | 430 | 4 | 137 | 4.61e-11 | 61.2 |
MS.gene33587.t1 | AT1G50700 | 28.966 | 145 | 84 | 4 | 292 | 430 | 379 | 510 | 4.77e-11 | 65.1 |
MS.gene33587.t1 | AT1G76650 | 33.803 | 142 | 78 | 3 | 289 | 430 | 41 | 166 | 6.61e-11 | 61.2 |
MS.gene33587.t1 | AT4G21940 | 30.345 | 145 | 82 | 4 | 292 | 430 | 407 | 538 | 7.26e-11 | 64.7 |
MS.gene33587.t1 | AT4G21940 | 30.345 | 145 | 82 | 4 | 292 | 430 | 407 | 538 | 7.38e-11 | 64.7 |
Find 101 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCAAGATTTCCCATATTTAT+AGG | 0.199746 | 1.1:+16026098 | None:intergenic |
CAGTTCCCACAGACCAAATT+TGG | 0.213494 | 1.1:+16025581 | None:intergenic |
CAGATCTAGAGTTGAGATTA+TGG | 0.234872 | 1.1:-16026012 | MS.gene33587:CDS |
TCCCGGGTTAGCTGTTATTT+TGG | 0.242954 | 1.1:-16026827 | MS.gene33587:CDS |
GCTTCTGAGGTGATCTGTTC+AGG | 0.254290 | 1.1:+16025632 | None:intergenic |
TCATATGATATTAATTTAGA+TGG | 0.283864 | 1.1:-16023964 | MS.gene33587:CDS |
TTCAAGGTGTTTGATTTAGA+TGG | 0.287480 | 1.1:-16024078 | MS.gene33587:CDS |
CTCCAATTCATTGCTGGTTA+GGG | 0.335375 | 1.1:+16024341 | None:intergenic |
GCTGGTTAGGGGACACATAT+TGG | 0.351211 | 1.1:+16024353 | None:intergenic |
AGCTGCCGGAGTTCCAAATT+TGG | 0.354456 | 1.1:-16025594 | MS.gene33587:CDS |
CAAATTTGGTCTGTGGGAAC+TGG | 0.359489 | 1.1:-16025580 | MS.gene33587:CDS |
TCCCCTAACCAGCAATGAAT+TGG | 0.368661 | 1.1:-16024343 | MS.gene33587:CDS |
CTTCTGAGGTGATCTGTTCA+GGG | 0.370164 | 1.1:+16025633 | None:intergenic |
ACCAACATCGTTATTATTGC+AGG | 0.371521 | 1.1:-16025946 | MS.gene33587:intron |
CAGATCTAAAATAGCTGATC+AGG | 0.374615 | 1.1:-16026881 | MS.gene33587:CDS |
GCTCCAATTCATTGCTGGTT+AGG | 0.375734 | 1.1:+16024340 | None:intergenic |
CAACTCAATGCAGGCCTTTG+TGG | 0.375845 | 1.1:+16026040 | None:intergenic |
AATCAGCTCCAATTCATTGC+TGG | 0.401785 | 1.1:+16024335 | None:intergenic |
AATCAATTGTTAGTGAGAAC+AGG | 0.403944 | 1.1:-16024261 | MS.gene33587:CDS |
AGATGGCAAGCTTGATTTCA+AGG | 0.404957 | 1.1:-16023947 | MS.gene33587:CDS |
GGGAAGAATGCCGTGGTGAT+AGG | 0.411300 | 1.1:-16025990 | MS.gene33587:CDS |
AATCACAAGCTCACCTCAAC+AGG | 0.411310 | 1.1:+16025518 | None:intergenic |
ATGGGAAATCTTGCTTTAAG+AGG | 0.424808 | 1.1:-16026089 | MS.gene33587:CDS |
AGATCTAGAGTTGAGATTAT+GGG | 0.429584 | 1.1:-16026011 | MS.gene33587:CDS |
CTTCATTCCAACTTCTTCAC+AGG | 0.436314 | 1.1:+16026756 | None:intergenic |
TTATTACTCCTGTACCTGGT+GGG | 0.438276 | 1.1:-16025294 | MS.gene33587:CDS |
AACAAGGACCCATCAATTCA+TGG | 0.439181 | 1.1:-16026667 | MS.gene33587:CDS |
AAAGGCCTAGGAAAAGTTCC+CGG | 0.449294 | 1.1:-16026844 | MS.gene33587:CDS |
ACAAGAATCCCATGAATTGA+TGG | 0.456818 | 1.1:+16026658 | None:intergenic |
AACATCAGCATCTGCACAAT+CGG | 0.466459 | 1.1:+16026711 | None:intergenic |
CACCAAAATAACAGCTAACC+CGG | 0.472440 | 1.1:+16026825 | None:intergenic |
TGGTATGTGGGATGAAGAAA+AGG | 0.481114 | 1.1:-16024007 | MS.gene33587:CDS |
CTAAAATAGCTGATCAGGTA+AGG | 0.481917 | 1.1:-16026876 | MS.gene33587:CDS |
GTGTTTGATTTAGATGGAGA+TGG | 0.487484 | 1.1:-16024072 | MS.gene33587:CDS |
AGAAGCATAGTAACTGTCAT+AGG | 0.493876 | 1.1:+16025265 | None:intergenic |
TCAGAAATTACTTGTGGTAG+AGG | 0.495686 | 1.1:+16026628 | None:intergenic |
ACTCCTGTACCTGGTGGGGT+TGG | 0.508928 | 1.1:-16025289 | MS.gene33587:CDS |
ATAATTGCCTGTGAAGAAGT+TGG | 0.509154 | 1.1:-16026763 | MS.gene33587:CDS |
TTACTTGTGGTAGAGGAAGC+TGG | 0.514178 | 1.1:+16026635 | None:intergenic |
GAGGATGGTTATCGTCTAGT+AGG | 0.519814 | 1.1:-16025355 | MS.gene33587:CDS |
CAGGATCCTAGCTGCGAGGA+TGG | 0.521735 | 1.1:-16025370 | MS.gene33587:CDS |
GTGCTTTGAAGAAGTCATAA+AGG | 0.523208 | 1.1:-16025326 | MS.gene33587:CDS |
ATGCAGGCCTTTGTGGTACA+AGG | 0.524272 | 1.1:+16026047 | None:intergenic |
ACAATTGATTCAGCTCCTCA+AGG | 0.526320 | 1.1:+16024274 | None:intergenic |
TTTCAAGACATACAGCGTCT+AGG | 0.530927 | 1.1:+16026141 | None:intergenic |
ACCTGCAATAATAACGATGT+TGG | 0.533274 | 1.1:+16025945 | None:intergenic |
GAAATCTTGCTTTAAGAGGA+AGG | 0.536522 | 1.1:-16026085 | MS.gene33587:CDS |
AAGGCCTAGGAAAAGTTCCC+GGG | 0.537444 | 1.1:-16026843 | MS.gene33587:CDS |
ATTCATCACTAGTCAAGAGC+TGG | 0.543089 | 1.1:-16024049 | MS.gene33587:CDS |
AAGTAAGAGAATCCCTCCTC+TGG | 0.543493 | 1.1:+16026800 | None:intergenic |
AGACGCTGTATGTCTTGAAA+AGG | 0.545903 | 1.1:-16026138 | MS.gene33587:CDS |
ATAGGAAGGAGTAATATTGT+TGG | 0.546862 | 1.1:-16025972 | MS.gene33587:CDS |
GGTCCAACCCCACCAGGTAC+AGG | 0.551911 | 1.1:+16025286 | None:intergenic |
TCTGATCAACAACTCAATGC+AGG | 0.555131 | 1.1:+16026031 | None:intergenic |
GGAGTTCCAAATTTGGTCTG+TGG | 0.555795 | 1.1:-16025587 | MS.gene33587:CDS |
ACAAGGACCCATCAATTCAT+GGG | 0.556155 | 1.1:-16026666 | MS.gene33587:CDS |
AAACTAGACATAAATAGTGA+TGG | 0.557379 | 1.1:-16024306 | MS.gene33587:CDS |
GATATTGTAGTTTCAGCTGC+CGG | 0.560233 | 1.1:-16025608 | MS.gene33587:CDS |
CGATAACCATCCTCGCAGCT+AGG | 0.562094 | 1.1:+16025364 | None:intergenic |
AGCTTGAATATCTAGTGGGA+AGG | 0.563184 | 1.1:-16024218 | MS.gene33587:CDS |
TGTGGGAACTGGATAAAGTC+CGG | 0.563582 | 1.1:-16025569 | MS.gene33587:CDS |
CAATTGATTCAGCTCCTCAA+GGG | 0.563849 | 1.1:+16024275 | None:intergenic |
AACATCGATCACAGTTGCAC+CGG | 0.566749 | 1.1:+16025550 | None:intergenic |
TGTTGAAGAGACTTGGTATG+TGG | 0.566871 | 1.1:-16024020 | MS.gene33587:CDS |
AAATCTTGCTTTAAGAGGAA+GGG | 0.571400 | 1.1:-16026084 | MS.gene33587:CDS |
GAGTTCCAAATTTGGTCTGT+GGG | 0.575243 | 1.1:-16025586 | MS.gene33587:CDS |
GGTGCAACTGTGATCGATGT+TGG | 0.583814 | 1.1:-16025548 | MS.gene33587:CDS |
GTTATTACTCCTGTACCTGG+TGG | 0.584107 | 1.1:-16025295 | MS.gene33587:CDS |
TCCAATTCATTGCTGGTTAG+GGG | 0.584771 | 1.1:+16024342 | None:intergenic |
GTTTATTCCTTGTACCACAA+AGG | 0.584812 | 1.1:-16026054 | MS.gene33587:CDS |
TTTGGGACAGCATCTGGACG+AGG | 0.585757 | 1.1:-16026171 | MS.gene33587:intron |
AGAATGCCGTGGTGATAGGA+AGG | 0.586248 | 1.1:-16025986 | MS.gene33587:CDS |
TCTGTTATTACTCCTGTACC+TGG | 0.586639 | 1.1:-16025298 | MS.gene33587:CDS |
CAAGAATCCCATGAATTGAT+GGG | 0.587301 | 1.1:+16026659 | None:intergenic |
GTCATAGGTCCAACCCCACC+AGG | 0.589287 | 1.1:+16025280 | None:intergenic |
GTTGAAGAGACTTGGTATGT+GGG | 0.589453 | 1.1:-16024019 | MS.gene33587:CDS |
GATCTAGAGTTGAGATTATG+GGG | 0.589476 | 1.1:-16026010 | MS.gene33587:CDS |
ACAGACCAAATTTGGAACTC+CGG | 0.591892 | 1.1:+16025589 | None:intergenic |
TATTACTCCTGTACCTGGTG+GGG | 0.593792 | 1.1:-16025293 | MS.gene33587:CDS |
AGAGGAGCTTGAATATCTAG+TGG | 0.598842 | 1.1:-16024223 | MS.gene33587:CDS |
TGATGGTGGTGATGATGTTG+AGG | 0.599027 | 1.1:-16024133 | MS.gene33587:CDS |
GTACGACGGTGACTGTTGCA+TGG | 0.603199 | 1.1:+16025672 | None:intergenic |
AGGTTTCAAGTATAGCATAG+AGG | 0.617626 | 1.1:-16024241 | MS.gene33587:CDS |
GAGGAGCTTGAATATCTAGT+GGG | 0.620423 | 1.1:-16024222 | MS.gene33587:CDS |
AACTACAATATCAGCTTCTG+AGG | 0.624409 | 1.1:+16025619 | None:intergenic |
GAATGTGTGTTGAAGAGACT+TGG | 0.625496 | 1.1:-16024027 | MS.gene33587:CDS |
TGTTGGAACAATTCCTGTTG+AGG | 0.633352 | 1.1:-16025531 | MS.gene33587:intron |
TCAGCATCTGCACAATCGGT+AGG | 0.639234 | 1.1:+16026715 | None:intergenic |
GTGGTACAAGGAATAAACAA+TGG | 0.641093 | 1.1:+16026059 | None:intergenic |
TGTCTTGAAAAGGACGTGGA+TGG | 0.641881 | 1.1:-16026128 | MS.gene33587:CDS |
TTCTGTAAATGCATGTACGA+CGG | 0.642163 | 1.1:+16025658 | None:intergenic |
TGGTGGTGATGATGTTGAGG+AGG | 0.642510 | 1.1:-16024130 | MS.gene33587:CDS |
TGATGGAAAGTTGATGGCAA+CGG | 0.644692 | 1.1:-16026908 | None:intergenic |
TGCTATCATGAGATTCAACA+AGG | 0.656626 | 1.1:-16026683 | MS.gene33587:CDS |
ACCAAAATAACAGCTAACCC+GGG | 0.677885 | 1.1:+16026826 | None:intergenic |
CTTTGAAGAAGTCATAAAGG+TGG | 0.705733 | 1.1:-16025323 | MS.gene33587:CDS |
ATTACTCCTTCCTATCACCA+CGG | 0.705836 | 1.1:+16025980 | None:intergenic |
TGTATGTCTTGAAAAGGACG+TGG | 0.710007 | 1.1:-16026132 | MS.gene33587:CDS |
GCGACAGGATCCTAGCTGCG+AGG | 0.729473 | 1.1:-16025374 | MS.gene33587:intron |
AGAAGTTGGAATGAAGTCTG+TGG | 0.734363 | 1.1:-16026749 | MS.gene33587:CDS |
GATTATGGGGAAGAATGCCG+TGG | 0.780443 | 1.1:-16025997 | MS.gene33587:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAGTTCTATAATAACAA+CGG | + | chr1.1:16025615-16025634 | None:intergenic | 15.0% |
!! | AATAAATAATTAGACAAATG+AGG | - | chr1.1:16024551-16024570 | MS.gene33587:intron | 15.0% |
!! | ATAAAGTGCAAATATTTATT+GGG | - | chr1.1:16025685-16025704 | MS.gene33587:intron | 15.0% |
!! | TCATATGATATTAATTTAGA+TGG | - | chr1.1:16026837-16026856 | MS.gene33587:CDS | 15.0% |
!!! | CTTTTTAATAAAAGTTTAAC+TGG | + | chr1.1:16025041-16025060 | None:intergenic | 15.0% |
!!! | TTATATATGTTATTTCAAAC+AGG | + | chr1.1:16024320-16024339 | None:intergenic | 15.0% |
!! | AAAAGTTCTATAATAACAAC+GGG | + | chr1.1:16025614-16025633 | None:intergenic | 20.0% |
!! | CATAAAGTGCAAATATTTAT+TGG | - | chr1.1:16025684-16025703 | MS.gene33587:intron | 20.0% |
!! | TAAAGATAGAAATTATGAGT+GGG | + | chr1.1:16025755-16025774 | None:intergenic | 20.0% |
!! | TAATCTTATGAGAAATAAAC+TGG | - | chr1.1:16025721-16025740 | MS.gene33587:intron | 20.0% |
!! | TCCAATATTATCATGAAAAT+GGG | - | chr1.1:16024350-16024369 | MS.gene33587:CDS | 20.0% |
!! | TGATATAAATGAGATATGAT+TGG | + | chr1.1:16024935-16024954 | None:intergenic | 20.0% |
!! | TGTAATACATTCTTTAATGT+TGG | - | chr1.1:16025098-16025117 | MS.gene33587:intron | 20.0% |
!!! | ATTATAGAACTTTTTGTTGA+AGG | - | chr1.1:16025620-16025639 | MS.gene33587:CDS | 20.0% |
!!! | ATTTTGTTTTGAATAAAGTC+TGG | + | chr1.1:16026323-16026342 | None:intergenic | 20.0% |
!!! | TATTAAAAAGCATGAAATCA+TGG | - | chr1.1:16025051-16025070 | MS.gene33587:intron | 20.0% |
!!! | TTATAGAACTTTTTGTTGAA+GGG | - | chr1.1:16025621-16025640 | MS.gene33587:CDS | 20.0% |
! | AAAATGACCTTGAACAAAAT+AGG | + | chr1.1:16025954-16025973 | None:intergenic | 25.0% |
! | AAACTAGACATAAATAGTGA+TGG | - | chr1.1:16026495-16026514 | MS.gene33587:intron | 25.0% |
! | AACTTAGAATTGTAGTAGAT+TGG | + | chr1.1:16024442-16024461 | None:intergenic | 25.0% |
! | AATAGTAACCCATCAAATTA+CGG | + | chr1.1:16024214-16024233 | None:intergenic | 25.0% |
! | AATTGCACATAACATATGTT+GGG | + | chr1.1:16026372-16026391 | None:intergenic | 25.0% |
! | CCAATATTATCATGAAAATG+GGG | - | chr1.1:16024351-16024370 | MS.gene33587:CDS | 25.0% |
! | CTAAAGATAGAAATTATGAG+TGG | + | chr1.1:16025756-16025775 | None:intergenic | 25.0% |
! | GTCCAATATTATCATGAAAA+TGG | - | chr1.1:16024349-16024368 | MS.gene33587:CDS | 25.0% |
! | TAATTGCACATAACATATGT+TGG | + | chr1.1:16026373-16026392 | None:intergenic | 25.0% |
! | TACACCTAAAAAGAAATTTG+TGG | + | chr1.1:16025082-16025101 | None:intergenic | 25.0% |
! | TCCATATTGAATCACAAAAA+TGG | - | chr1.1:16026645-16026664 | MS.gene33587:CDS | 25.0% |
!! | ATCACCACAAATTTCTTTTT+AGG | - | chr1.1:16025075-16025094 | MS.gene33587:intron | 25.0% |
!! | ATCAGTTAACCAAACTTTTA+CGG | - | chr1.1:16025397-16025416 | MS.gene33587:intron | 25.0% |
!! | GATAATTGTAGAGAAGTTTT+AGG | + | chr1.1:16024974-16024993 | None:intergenic | 25.0% |
!! | GGTTTTCATCCTATAAATAT+GGG | - | chr1.1:16024694-16024713 | MS.gene33587:intron | 25.0% |
!! | TGGTTTTCATCCTATAAATA+TGG | - | chr1.1:16024693-16024712 | MS.gene33587:intron | 25.0% |
!!! | ACCATTTTTGTGATTCAATA+TGG | + | chr1.1:16026649-16026668 | None:intergenic | 25.0% |
!!! | CAATTCTAAGTTTTGTTGTT+TGG | - | chr1.1:16024450-16024469 | MS.gene33587:intron | 25.0% |
!!! | TGATTTGTTGCAAAATGTTT+GGG | - | chr1.1:16024613-16024632 | MS.gene33587:intron | 25.0% |
!!! | TGTTAATCCTCTAGTTTTTA+GGG | - | chr1.1:16026048-16026067 | MS.gene33587:CDS | 25.0% |
!!! | TTGATTTGTTGCAAAATGTT+TGG | - | chr1.1:16024612-16024631 | MS.gene33587:intron | 25.0% |
AAACAAGTTTACATGTCAGA+TGG | - | chr1.1:16024520-16024539 | MS.gene33587:intron | 30.0% | |
AATCAATTGTTAGTGAGAAC+AGG | - | chr1.1:16026540-16026559 | MS.gene33587:intron | 30.0% | |
AATGTGATTGCTTACTTTAG+AGG | - | chr1.1:16025920-16025939 | MS.gene33587:intron | 30.0% | |
ACACATTCAGAAATTACTTG+TGG | + | chr1.1:16024182-16024201 | None:intergenic | 30.0% | |
ACATATGAAGTTGCAAAGTT+TGG | + | chr1.1:16025355-16025374 | None:intergenic | 30.0% | |
ATAGGAAGGAGTAATATTGT+TGG | - | chr1.1:16024829-16024848 | MS.gene33587:intron | 30.0% | |
GCAAGATTTCCCATATTTAT+AGG | + | chr1.1:16024706-16024725 | None:intergenic | 30.0% | |
GTCTCATCAAAATAATCAAG+TGG | - | chr1.1:16026345-16026364 | MS.gene33587:intron | 30.0% | |
TATAAATACCCATACGTGTA+AGG | + | chr1.1:16026403-16026422 | None:intergenic | 30.0% | |
TTCTATACTGACAATGCATA+CGG | + | chr1.1:16024894-16024913 | None:intergenic | 30.0% | |
TTGAATCACAAAAATGGTGA+TGG | - | chr1.1:16026651-16026670 | MS.gene33587:CDS | 30.0% | |
! | ACTTTTTGCCGTAATTTGAT+GGG | - | chr1.1:16024203-16024222 | MS.gene33587:CDS | 30.0% |
! | AGATCTAGAGTTGAGATTAT+GGG | - | chr1.1:16024790-16024809 | MS.gene33587:intron | 30.0% |
! | CCCCATTTTCATGATAATAT+TGG | + | chr1.1:16024354-16024373 | None:intergenic | 30.0% |
! | GCATTTTATCCGTAAAAGTT+TGG | + | chr1.1:16025409-16025428 | None:intergenic | 30.0% |
! | TTCAAGGTGTTTGATTTAGA+TGG | - | chr1.1:16026723-16026742 | MS.gene33587:CDS | 30.0% |
!! | AAATCTTGCTTTAAGAGGAA+GGG | - | chr1.1:16024717-16024736 | MS.gene33587:intron | 30.0% |
!! | TGATCTTTTGAAGACTTTCA+AGG | - | chr1.1:16026707-16026726 | MS.gene33587:CDS | 30.0% |
!!! | GTGTTAATCCTCTAGTTTTT+AGG | - | chr1.1:16026047-16026066 | MS.gene33587:CDS | 30.0% |
!!! | GTTAATCCTCTAGTTTTTAG+GGG | - | chr1.1:16026049-16026068 | MS.gene33587:CDS | 30.0% |
!!! | TTCTAAGTTTTGTTGTTTGG+AGG | - | chr1.1:16024453-16024472 | MS.gene33587:intron | 30.0% |
AAACCTTAACATGTGCTCTA+AGG | + | chr1.1:16025663-16025682 | None:intergenic | 35.0% | |
AACCTTAACATGTGCTCTAA+GGG | + | chr1.1:16025662-16025681 | None:intergenic | 35.0% | |
AACTACAATATCAGCTTCTG+AGG | + | chr1.1:16025185-16025204 | None:intergenic | 35.0% | |
AATTCACACCTTACACGTAT+GGG | - | chr1.1:16026392-16026411 | MS.gene33587:intron | 35.0% | |
ACAAGAATCCCATGAATTGA+TGG | + | chr1.1:16024146-16024165 | None:intergenic | 35.0% | |
ACCAACATCGTTATTATTGC+AGG | - | chr1.1:16024855-16024874 | MS.gene33587:intron | 35.0% | |
ACCTGCAATAATAACGATGT+TGG | + | chr1.1:16024859-16024878 | None:intergenic | 35.0% | |
AGGGGAAATGGATATTGTTT+GGG | - | chr1.1:16026067-16026086 | MS.gene33587:CDS | 35.0% | |
ATAATTGCCTGTGAAGAAGT+TGG | - | chr1.1:16024038-16024057 | MS.gene33587:CDS | 35.0% | |
CAAGAATCCCATGAATTGAT+GGG | + | chr1.1:16024145-16024164 | None:intergenic | 35.0% | |
CAGGTAAGGCAAATGAAAAA+AGG | - | chr1.1:16023939-16023958 | MS.gene33587:CDS | 35.0% | |
CTAAAATAGCTGATCAGGTA+AGG | - | chr1.1:16023925-16023944 | MS.gene33587:CDS | 35.0% | |
GTGGTACAAGGAATAAACAA+TGG | + | chr1.1:16024745-16024764 | None:intergenic | 35.0% | |
GTTTATTCCTTGTACCACAA+AGG | - | chr1.1:16024747-16024766 | MS.gene33587:intron | 35.0% | |
TAATTCACACCTTACACGTA+TGG | - | chr1.1:16026391-16026410 | MS.gene33587:intron | 35.0% | |
TAGGGGAAATGGATATTGTT+TGG | - | chr1.1:16026066-16026085 | MS.gene33587:CDS | 35.0% | |
TCAGAAATTACTTGTGGTAG+AGG | + | chr1.1:16024176-16024195 | None:intergenic | 35.0% | |
TGCTATCATGAGATTCAACA+AGG | - | chr1.1:16024118-16024137 | MS.gene33587:CDS | 35.0% | |
TTCTGTAAATGCATGTACGA+CGG | + | chr1.1:16025146-16025165 | None:intergenic | 35.0% | |
! | AAACTCGAGTGTTTCTAAGT+TGG | + | chr1.1:16025993-16026012 | None:intergenic | 35.0% |
! | AGAAGCATAGTAACTGTCAT+AGG | + | chr1.1:16025539-16025558 | None:intergenic | 35.0% |
! | AGGTTTCAAGTATAGCATAG+AGG | - | chr1.1:16026560-16026579 | MS.gene33587:intron | 35.0% |
! | ATGGGAAATCTTGCTTTAAG+AGG | - | chr1.1:16024712-16024731 | MS.gene33587:intron | 35.0% |
! | CAGATCTAAAATAGCTGATC+AGG | - | chr1.1:16023920-16023939 | MS.gene33587:CDS | 35.0% |
! | CAGATCTAGAGTTGAGATTA+TGG | - | chr1.1:16024789-16024808 | MS.gene33587:intron | 35.0% |
! | CTTTGAAGAAGTCATAAAGG+TGG | - | chr1.1:16025478-16025497 | MS.gene33587:intron | 35.0% |
! | GACTTTTTGCCGTAATTTGA+TGG | - | chr1.1:16024202-16024221 | MS.gene33587:CDS | 35.0% |
! | GATCTAGAGTTGAGATTATG+GGG | - | chr1.1:16024791-16024810 | MS.gene33587:intron | 35.0% |
! | GTAGAATTGTTTTCTGTCGT+TGG | - | chr1.1:16024389-16024408 | MS.gene33587:intron | 35.0% |
! | GTCGAATCCTATTTTGTTCA+AGG | - | chr1.1:16025944-16025963 | MS.gene33587:intron | 35.0% |
! | GTGTTTGATTTAGATGGAGA+TGG | - | chr1.1:16026729-16026748 | MS.gene33587:CDS | 35.0% |
! | TTTTACGGATAAAATGCGAC+AGG | - | chr1.1:16025412-16025431 | MS.gene33587:intron | 35.0% |
!! | AAGGTCATTTTAGATGTGGT+GGG | - | chr1.1:16025963-16025982 | MS.gene33587:CDS | 35.0% |
!! | AATCACAAAAATGGTGATGG+TGG | - | chr1.1:16026654-16026673 | MS.gene33587:CDS | 35.0% |
!! | GAAATCTTGCTTTAAGAGGA+AGG | - | chr1.1:16024716-16024735 | MS.gene33587:intron | 35.0% |
!! | GTGCTTTGAAGAAGTCATAA+AGG | - | chr1.1:16025475-16025494 | MS.gene33587:intron | 35.0% |
!! | GTTCAAGGTCATTTTAGATG+TGG | - | chr1.1:16025959-16025978 | MS.gene33587:CDS | 35.0% |
!! | TGATGGAATTTTAACCCTTG+AGG | - | chr1.1:16026512-16026531 | MS.gene33587:intron | 35.0% |
AACAAGGACCCATCAATTCA+TGG | - | chr1.1:16024134-16024153 | MS.gene33587:CDS | 40.0% | |
AACATCAGCATCTGCACAAT+CGG | + | chr1.1:16024093-16024112 | None:intergenic | 40.0% | |
AATCAGCTCCAATTCATTGC+TGG | + | chr1.1:16026469-16026488 | None:intergenic | 40.0% | |
ACAAGGACCCATCAATTCAT+GGG | - | chr1.1:16024135-16024154 | MS.gene33587:CDS | 40.0% | |
ACCAAAATAACAGCTAACCC+GGG | + | chr1.1:16023978-16023997 | None:intergenic | 40.0% | |
AGAAGTTGGAATGAAGTCTG+TGG | - | chr1.1:16024052-16024071 | MS.gene33587:CDS | 40.0% | |
AGACGCTGTATGTCTTGAAA+AGG | - | chr1.1:16024663-16024682 | MS.gene33587:intron | 40.0% | |
AGAGGAGCTTGAATATCTAG+TGG | - | chr1.1:16026578-16026597 | MS.gene33587:intron | 40.0% | |
AGATGGCAAGCTTGATTTCA+AGG | - | chr1.1:16026854-16026873 | MS.gene33587:CDS | 40.0% | |
AGCTTGAATATCTAGTGGGA+AGG | - | chr1.1:16026583-16026602 | MS.gene33587:intron | 40.0% | |
AGGCAAATGAAAAAAGGCCT+AGG | - | chr1.1:16023945-16023964 | MS.gene33587:CDS | 40.0% | |
ATTACTCCTTCCTATCACCA+CGG | + | chr1.1:16024824-16024843 | None:intergenic | 40.0% | |
ATTCATCACTAGTCAAGAGC+TGG | - | chr1.1:16026752-16026771 | MS.gene33587:CDS | 40.0% | |
CACCAAAATAACAGCTAACC+CGG | + | chr1.1:16023979-16023998 | None:intergenic | 40.0% | |
CCATTTCCCCTAAAAACTAG+AGG | + | chr1.1:16026058-16026077 | None:intergenic | 40.0% | |
CTTCATTCCAACTTCTTCAC+AGG | + | chr1.1:16024048-16024067 | None:intergenic | 40.0% | |
GAATGTGTGTTGAAGAGACT+TGG | - | chr1.1:16026774-16026793 | MS.gene33587:CDS | 40.0% | |
GAGGAGCTTGAATATCTAGT+GGG | - | chr1.1:16026579-16026598 | MS.gene33587:intron | 40.0% | |
GAGTTCCAAATTTGGTCTGT+GGG | - | chr1.1:16025215-16025234 | MS.gene33587:intron | 40.0% | |
GATATTGTAGTTTCAGCTGC+CGG | - | chr1.1:16025193-16025212 | MS.gene33587:intron | 40.0% | |
TCTGATCAACAACTCAATGC+AGG | + | chr1.1:16024773-16024792 | None:intergenic | 40.0% | |
TCTGTTATTACTCCTGTACC+TGG | - | chr1.1:16025503-16025522 | MS.gene33587:intron | 40.0% | |
TGGTATGTGGGATGAAGAAA+AGG | - | chr1.1:16026794-16026813 | MS.gene33587:CDS | 40.0% | |
TGTATGTCTTGAAAAGGACG+TGG | - | chr1.1:16024669-16024688 | MS.gene33587:intron | 40.0% | |
TGTTGGAACAATTCCTGTTG+AGG | - | chr1.1:16025270-16025289 | MS.gene33587:CDS | 40.0% | |
TTATTACTCCTGTACCTGGT+GGG | - | chr1.1:16025507-16025526 | MS.gene33587:intron | 40.0% | |
TTTCAAGACATACAGCGTCT+AGG | + | chr1.1:16024663-16024682 | None:intergenic | 40.0% | |
! | AAAATGTTTGGGACAGCATC+TGG | - | chr1.1:16024624-16024643 | MS.gene33587:intron | 40.0% |
! | ACAATTGATTCAGCTCCTCA+AGG | + | chr1.1:16026530-16026549 | None:intergenic | 40.0% |
! | ACAGACCAAATTTGGAACTC+CGG | + | chr1.1:16025215-16025234 | None:intergenic | 40.0% |
! | CAATTGATTCAGCTCCTCAA+GGG | + | chr1.1:16026529-16026548 | None:intergenic | 40.0% |
! | CTCCAATTCATTGCTGGTTA+GGG | + | chr1.1:16026463-16026482 | None:intergenic | 40.0% |
! | GTTGAAGAGACTTGGTATGT+GGG | - | chr1.1:16026782-16026801 | MS.gene33587:CDS | 40.0% |
! | TCCAATTCATTGCTGGTTAG+GGG | + | chr1.1:16026462-16026481 | None:intergenic | 40.0% |
! | TGTTGAAGAGACTTGGTATG+TGG | - | chr1.1:16026781-16026800 | MS.gene33587:CDS | 40.0% |
!! | CAAGGTCATTTTAGATGTGG+TGG | - | chr1.1:16025962-16025981 | MS.gene33587:CDS | 40.0% |
!!! | CCTCTAGTTTTTAGGGGAAA+TGG | - | chr1.1:16026055-16026074 | MS.gene33587:CDS | 40.0% |
!!! | GGGTTAGCTGTTATTTTGGT+GGG | - | chr1.1:16023978-16023997 | MS.gene33587:CDS | 40.0% |
AAAGGCCTAGGAAAAGTTCC+CGG | - | chr1.1:16023957-16023976 | MS.gene33587:CDS | 45.0% | |
AACATCGATCACAGTTGCAC+CGG | + | chr1.1:16025254-16025273 | None:intergenic | 45.0% | |
AAGTAAGAGAATCCCTCCTC+TGG | + | chr1.1:16024004-16024023 | None:intergenic | 45.0% | |
AATCACAAGCTCACCTCAAC+AGG | + | chr1.1:16025286-16025305 | None:intergenic | 45.0% | |
CAAATTTGGTCTGTGGGAAC+TGG | - | chr1.1:16025221-16025240 | MS.gene33587:intron | 45.0% | |
CAGTTCCCACAGACCAAATT+TGG | + | chr1.1:16025223-16025242 | None:intergenic | 45.0% | |
GAGGATGGTTATCGTCTAGT+AGG | - | chr1.1:16025446-16025465 | MS.gene33587:intron | 45.0% | |
GCTAAAGTTCAGCAAGCGAT+GGG | + | chr1.1:16024291-16024310 | None:intergenic | 45.0% | |
GGAGTTCCAAATTTGGTCTG+TGG | - | chr1.1:16025214-16025233 | MS.gene33587:intron | 45.0% | |
GTGAGAGCAAGTGTGAGAAA+TGG | + | chr1.1:16024254-16024273 | None:intergenic | 45.0% | |
GTTATTACTCCTGTACCTGG+TGG | - | chr1.1:16025506-16025525 | MS.gene33587:intron | 45.0% | |
TATTACTCCTGTACCTGGTG+GGG | - | chr1.1:16025508-16025527 | MS.gene33587:intron | 45.0% | |
TCCCCTAACCAGCAATGAAT+TGG | - | chr1.1:16026458-16026477 | MS.gene33587:intron | 45.0% | |
TGCCCTTAGAGCACATGTTA+AGG | - | chr1.1:16025657-16025676 | MS.gene33587:CDS | 45.0% | |
TGCTAAAGTTCAGCAAGCGA+TGG | + | chr1.1:16024292-16024311 | None:intergenic | 45.0% | |
TGTCTTGAAAAGGACGTGGA+TGG | - | chr1.1:16024673-16024692 | MS.gene33587:intron | 45.0% | |
TGTGGGAACTGGATAAAGTC+CGG | - | chr1.1:16025232-16025251 | MS.gene33587:intron | 45.0% | |
TTACTTGTGGTAGAGGAAGC+TGG | + | chr1.1:16024169-16024188 | None:intergenic | 45.0% | |
! | GAGGATTAGCACTTGTGTTC+AGG | - | chr1.1:16024570-16024589 | MS.gene33587:intron | 45.0% |
! | GCTCCAATTCATTGCTGGTT+AGG | + | chr1.1:16026464-16026483 | None:intergenic | 45.0% |
!! | CTTCTGAGGTGATCTGTTCA+GGG | + | chr1.1:16025171-16025190 | None:intergenic | 45.0% |
!! | TGATGGTGGTGATGATGTTG+AGG | - | chr1.1:16026668-16026687 | MS.gene33587:CDS | 45.0% |
!!! | CGGGTTAGCTGTTATTTTGG+TGG | - | chr1.1:16023977-16023996 | MS.gene33587:CDS | 45.0% |
!!! | TCCCGGGTTAGCTGTTATTT+TGG | - | chr1.1:16023974-16023993 | MS.gene33587:CDS | 45.0% |
!! | ATAACATATATAATTATTTA+TGG | - | chr1.1:16024327-16024346 | MS.gene33587:CDS | 5.0% |
AAGGCCTAGGAAAAGTTCCC+GGG | - | chr1.1:16023958-16023977 | MS.gene33587:CDS | 50.0% | |
AGAATGCCGTGGTGATAGGA+AGG | - | chr1.1:16024815-16024834 | MS.gene33587:intron | 50.0% | |
AGCTGCCGGAGTTCCAAATT+TGG | - | chr1.1:16025207-16025226 | MS.gene33587:intron | 50.0% | |
ATGCAGGCCTTTGTGGTACA+AGG | + | chr1.1:16024757-16024776 | None:intergenic | 50.0% | |
CAACTCAATGCAGGCCTTTG+TGG | + | chr1.1:16024764-16024783 | None:intergenic | 50.0% | |
GATTATGGGGAAGAATGCCG+TGG | - | chr1.1:16024804-16024823 | MS.gene33587:intron | 50.0% | |
GCTGGTTAGGGGACACATAT+TGG | + | chr1.1:16026451-16026470 | None:intergenic | 50.0% | |
GGTGCAACTGTGATCGATGT+TGG | - | chr1.1:16025253-16025272 | MS.gene33587:CDS | 50.0% | |
TCAGCATCTGCACAATCGGT+AGG | + | chr1.1:16024089-16024108 | None:intergenic | 50.0% | |
! | CTAACCCGGGAACTTTTCCT+AGG | + | chr1.1:16023965-16023984 | None:intergenic | 50.0% |
! | TGGTGGTGATGATGTTGAGG+AGG | - | chr1.1:16026671-16026690 | MS.gene33587:CDS | 50.0% |
!! | GCTTCTGAGGTGATCTGTTC+AGG | + | chr1.1:16025172-16025191 | None:intergenic | 50.0% |
!!! | CTGTTATTTTGGTGGGCCAG+AGG | - | chr1.1:16023985-16024004 | MS.gene33587:CDS | 50.0% |
!!! | TATTTTGGTGGGCCAGAGGA+GGG | - | chr1.1:16023989-16024008 | MS.gene33587:CDS | 50.0% |
!!! | TTATTTTGGTGGGCCAGAGG+AGG | - | chr1.1:16023988-16024007 | MS.gene33587:CDS | 50.0% |
CGATAACCATCCTCGCAGCT+AGG | + | chr1.1:16025440-16025459 | None:intergenic | 55.0% | |
GGGAAGAATGCCGTGGTGAT+AGG | - | chr1.1:16024811-16024830 | MS.gene33587:intron | 55.0% | |
GTACGACGGTGACTGTTGCA+TGG | + | chr1.1:16025132-16025151 | None:intergenic | 55.0% | |
! | TTTGGGACAGCATCTGGACG+AGG | - | chr1.1:16024630-16024649 | MS.gene33587:intron | 55.0% |
ACTCCTGTACCTGGTGGGGT+TGG | - | chr1.1:16025512-16025531 | MS.gene33587:intron | 60.0% | |
CAGGATCCTAGCTGCGAGGA+TGG | - | chr1.1:16025431-16025450 | MS.gene33587:intron | 60.0% | |
GTCATAGGTCCAACCCCACC+AGG | + | chr1.1:16025524-16025543 | None:intergenic | 60.0% | |
GCGACAGGATCCTAGCTGCG+AGG | - | chr1.1:16025427-16025446 | MS.gene33587:intron | 65.0% | |
GGTCCAACCCCACCAGGTAC+AGG | + | chr1.1:16025518-16025537 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 16023906 | 16026917 | 16023906 | ID=MS.gene33587 |
chr1.1 | mRNA | 16023906 | 16026917 | 16023906 | ID=MS.gene33587.t1;Parent=MS.gene33587 |
chr1.1 | exon | 16026639 | 16026917 | 16026639 | ID=MS.gene33587.t1.exon1;Parent=MS.gene33587.t1 |
chr1.1 | CDS | 16026639 | 16026917 | 16026639 | ID=cds.MS.gene33587.t1;Parent=MS.gene33587.t1 |
chr1.1 | exon | 16025947 | 16026183 | 16025947 | ID=MS.gene33587.t1.exon2;Parent=MS.gene33587.t1 |
chr1.1 | CDS | 16025947 | 16026183 | 16025947 | ID=cds.MS.gene33587.t1;Parent=MS.gene33587.t1 |
chr1.1 | exon | 16025532 | 16025699 | 16025532 | ID=MS.gene33587.t1.exon3;Parent=MS.gene33587.t1 |
chr1.1 | CDS | 16025532 | 16025699 | 16025532 | ID=cds.MS.gene33587.t1;Parent=MS.gene33587.t1 |
chr1.1 | exon | 16025239 | 16025389 | 16025239 | ID=MS.gene33587.t1.exon4;Parent=MS.gene33587.t1 |
chr1.1 | CDS | 16025239 | 16025389 | 16025239 | ID=cds.MS.gene33587.t1;Parent=MS.gene33587.t1 |
chr1.1 | exon | 16023906 | 16024384 | 16023906 | ID=MS.gene33587.t1.exon5;Parent=MS.gene33587.t1 |
chr1.1 | CDS | 16023906 | 16024384 | 16023906 | ID=cds.MS.gene33587.t1;Parent=MS.gene33587.t1 |
Gene Sequence |
Protein sequence |