Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65953.t1 | XP_003589595.2 | 98.7 | 297 | 4 | 0 | 178 | 474 | 65 | 361 | 6.50E-163 | 583.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65953.t1 | A2RVV7 | 71.1 | 291 | 84 | 0 | 180 | 470 | 60 | 350 | 3.8e-119 | 429.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65953.t1 | G7I8G5 | 98.7 | 297 | 4 | 0 | 178 | 474 | 65 | 361 | 4.7e-163 | 583.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene65953 | MS.gene27688 | PPI |
| MS.gene65953 | MS.gene06972 | PPI |
| MS.gene65953 | MS.gene84986 | PPI |
| MS.gene65953 | MS.gene22986 | PPI |
| MS.gene65953 | MS.gene023835 | PPI |
| MS.gene65953 | MS.gene028078 | PPI |
| MS.gene65953 | MS.gene52204 | PPI |
| MS.gene65953 | MS.gene070084 | PPI |
| MS.gene65953 | MS.gene07116 | PPI |
| MS.gene65953 | MS.gene72831 | PPI |
| MS.gene65953 | MS.gene028080 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65953.t1 | MTR_1g030450 | 97.993 | 299 | 6 | 0 | 176 | 474 | 63 | 361 | 0.0 | 600 |
| MS.gene65953.t1 | MTR_7g076680 | 64.014 | 289 | 104 | 0 | 185 | 473 | 79 | 367 | 7.05e-134 | 391 |
| MS.gene65953.t1 | MTR_7g076680 | 64.014 | 289 | 104 | 0 | 185 | 473 | 62 | 350 | 7.91e-134 | 390 |
| MS.gene65953.t1 | MTR_7g076680 | 64.014 | 289 | 104 | 0 | 185 | 473 | 58 | 346 | 3.45e-133 | 389 |
| MS.gene65953.t1 | MTR_3g007490 | 58.763 | 291 | 119 | 1 | 179 | 469 | 69 | 358 | 3.30e-128 | 376 |
| MS.gene65953.t1 | MTR_7g108580 | 62.021 | 287 | 109 | 0 | 183 | 469 | 2 | 288 | 1.18e-126 | 370 |
| MS.gene65953.t1 | MTR_3g007580 | 53.774 | 106 | 42 | 2 | 310 | 414 | 15 | 114 | 4.21e-30 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65953.t1 | AT2G38660 | 66.877 | 317 | 93 | 2 | 165 | 471 | 37 | 351 | 6.83e-153 | 439 |
| MS.gene65953.t1 | AT2G38660 | 66.877 | 317 | 93 | 2 | 165 | 471 | 37 | 351 | 6.83e-153 | 439 |
| MS.gene65953.t1 | AT4G00620 | 64.407 | 295 | 105 | 0 | 179 | 473 | 65 | 359 | 2.79e-137 | 399 |
| MS.gene65953.t1 | AT2G38660 | 65.845 | 284 | 85 | 2 | 165 | 438 | 37 | 318 | 3.02e-133 | 388 |
| MS.gene65953.t1 | AT3G12290 | 59.864 | 294 | 118 | 0 | 179 | 472 | 5 | 298 | 1.23e-125 | 367 |
| MS.gene65953.t1 | AT4G00600 | 53.608 | 291 | 99 | 1 | 183 | 473 | 55 | 309 | 6.58e-105 | 315 |
| MS.gene65953.t1 | AT2G38660 | 64.423 | 208 | 62 | 2 | 165 | 362 | 37 | 242 | 2.91e-89 | 273 |
| MS.gene65953.t1 | AT2G38660 | 55.039 | 129 | 46 | 2 | 165 | 283 | 37 | 163 | 1.28e-39 | 141 |
| MS.gene65953.t1 | AT2G38660 | 55.039 | 129 | 46 | 2 | 165 | 283 | 37 | 163 | 1.28e-39 | 141 |
| MS.gene65953.t1 | AT2G38660 | 55.039 | 129 | 46 | 2 | 165 | 283 | 37 | 163 | 1.28e-39 | 141 |
| MS.gene65953.t1 | AT2G38660 | 55.039 | 129 | 46 | 2 | 165 | 283 | 37 | 163 | 1.28e-39 | 141 |
Find 133 sgRNAs with CRISPR-Local
Find 339 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAAGATTTCCCATATTTAT+AGG | 0.199746 | 1.2:+15974073 | None:intergenic |
| CAGTTCCCACAGACCAAATT+TGG | 0.213494 | 1.2:+15973551 | None:intergenic |
| TGTGAAACAATACAAATTTC+AGG | 0.236241 | 1.2:-15977405 | MS.gene65953:CDS |
| TCCCGGGTTAGCTGTTATTT+TGG | 0.242954 | 1.2:-15974801 | MS.gene65953:CDS |
| CAGATCTGGAGTTGAGATTA+TGG | 0.243746 | 1.2:-15973987 | MS.gene65953:CDS |
| GCTTCTGAGGTGATCTGTTC+AGG | 0.254290 | 1.2:+15973602 | None:intergenic |
| CCATCAATGAACCATTGTTT+AGG | 0.310056 | 1.2:+15977620 | None:intergenic |
| AACTTCTAATTCTTGATAGA+AGG | 0.328832 | 1.2:+15977514 | None:intergenic |
| CATCAATGAACCATTGTTTA+GGG | 0.338080 | 1.2:+15977621 | None:intergenic |
| CCACCTGTTCCTCCATTCCT+AGG | 0.353664 | 1.2:-15977542 | MS.gene65953:CDS |
| AGCTGCCGGAGTTCCAAATT+TGG | 0.354456 | 1.2:-15973564 | MS.gene65953:CDS |
| CAAATTTGGTCTGTGGGAAC+TGG | 0.359489 | 1.2:-15973550 | MS.gene65953:CDS |
| CTAATTCTTGATAGAAGGTT+AGG | 0.366696 | 1.2:+15977519 | None:intergenic |
| CTTCTGAGGTGATCTGTTCA+GGG | 0.370164 | 1.2:+15973603 | None:intergenic |
| ACCAACATCGTTATTATTGC+AGG | 0.371521 | 1.2:-15973921 | MS.gene65953:intron |
| CAACTCAATGCAGGCCTTTG+TGG | 0.375845 | 1.2:+15974015 | None:intergenic |
| AAGATCTAAAATAGCTGATC+AGG | 0.387246 | 1.2:-15974855 | MS.gene65953:CDS |
| GGAGTTGAAGAAGGATCTAT+TGG | 0.390580 | 1.2:-15976435 | MS.gene65953:CDS |
| AATTCTCTGCCACCACATTC+TGG | 0.398021 | 1.2:+15977361 | None:intergenic |
| CCTAAACAATGGTTCATTGA+TGG | 0.401828 | 1.2:-15977620 | MS.gene65953:CDS |
| GGGAAGAATGCCGTGGTGAT+AGG | 0.411300 | 1.2:-15973965 | MS.gene65953:CDS |
| AATCACAAGCTCACCTCAAC+AGG | 0.411310 | 1.2:+15973488 | None:intergenic |
| ATTGTTTAGGGGTGCATTGT+TGG | 0.417586 | 1.2:+15977633 | None:intergenic |
| ATGGGAAATCTTGCTTTAAG+AGG | 0.424808 | 1.2:-15974064 | MS.gene65953:CDS |
| AGATCTGGAGTTGAGATTAT+GGG | 0.427144 | 1.2:-15973986 | MS.gene65953:CDS |
| TGGAGGAACAGGTGGAAAGA+TGG | 0.431124 | 1.2:+15977550 | None:intergenic |
| TTCTGGAGGTTGGGTTGTCG+TGG | 0.432252 | 1.2:-15976460 | MS.gene65953:CDS |
| TTATTACTCCTGTACCTGGT+GGG | 0.438276 | 1.2:-15973318 | MS.gene65953:CDS |
| AACAAGGACCCATCAATTCA+TGG | 0.439181 | 1.2:-15974641 | MS.gene65953:CDS |
| AGGCCTAGGAATGGAGGAAC+AGG | 0.442288 | 1.2:+15977539 | None:intergenic |
| AAAGGCCTAGGAAAAGTTCC+CGG | 0.449294 | 1.2:-15974818 | MS.gene65953:CDS |
| CAAACTGCTACAGTGATTGA+TGG | 0.450609 | 1.2:-15974899 | MS.gene65953:CDS |
| ACAAGAATCCCATGAATTGA+TGG | 0.456818 | 1.2:+15974632 | None:intergenic |
| AACATCAGCATCTGCACAAT+CGG | 0.466459 | 1.2:+15974685 | None:intergenic |
| AAGACGTAGTTCTGGAGGTT+GGG | 0.467296 | 1.2:-15976469 | MS.gene65953:intron |
| AGAATGTGGTGGCAGAGAAT+TGG | 0.467373 | 1.2:-15977359 | MS.gene65953:intron |
| CACCAAAATAACAGCTAACC+CGG | 0.472440 | 1.2:+15974799 | None:intergenic |
| CTTCATTCCAACTTCTTCGC+AGG | 0.478945 | 1.2:+15974730 | None:intergenic |
| TCAGAAATTACTTGTGGTAG+AGG | 0.486662 | 1.2:+15974602 | None:intergenic |
| AGAAGCATAGTAACTGTCAT+AGG | 0.493876 | 1.2:+15973289 | None:intergenic |
| CTTGATAGAAGGTTAGGCCT+AGG | 0.494858 | 1.2:+15977525 | None:intergenic |
| GAAGACGTAGTTCTGGAGGT+TGG | 0.497164 | 1.2:-15976470 | MS.gene65953:intron |
| ATTGAGTTGTTGATCAGATC+TGG | 0.497667 | 1.2:-15974001 | MS.gene65953:CDS |
| GGAGGTTGGGTTGTCGTGGG+TGG | 0.501838 | 1.2:-15976456 | MS.gene65953:CDS |
| ACTCCTGTACCTGGTGGGGT+TGG | 0.508928 | 1.2:-15973313 | MS.gene65953:CDS |
| TCTGGAGGTTGGGTTGTCGT+GGG | 0.509493 | 1.2:-15976459 | MS.gene65953:CDS |
| ATAATTGCCTGCGAAGAAGT+TGG | 0.511331 | 1.2:-15974737 | MS.gene65953:CDS |
| CAGGTTATGCCCTACTGCGA+TGG | 0.512777 | 1.2:-15977386 | MS.gene65953:CDS |
| TTACTTGTGGTAGAGGAAGC+TGG | 0.514178 | 1.2:+15974609 | None:intergenic |
| CAGGATCCTAGCTGCGAGGA+TGG | 0.515011 | 1.2:-15973394 | MS.gene65953:CDS |
| AGTGATTGATGGAAAGTTGA+TGG | 0.516356 | 1.2:-15974888 | MS.gene65953:CDS |
| GAGGATGGTTATCGTCTAGT+AGG | 0.519814 | 1.2:-15973379 | MS.gene65953:CDS |
| GTGCTTTGAAGAAGTCATAA+AGG | 0.523208 | 1.2:-15973350 | MS.gene65953:CDS |
| ATGCAGGCCTTTGTGGTACA+AGG | 0.524272 | 1.2:+15974022 | None:intergenic |
| TTTCAAGACATACAGCGTCT+AGG | 0.530927 | 1.2:+15974116 | None:intergenic |
| ACCTGCAATAATAACGATGT+TGG | 0.533274 | 1.2:+15973920 | None:intergenic |
| CCACGATGGAGACAGAGAAA+CGG | 0.534281 | 1.2:+15975710 | None:intergenic |
| GAAATCTTGCTTTAAGAGGA+AGG | 0.536522 | 1.2:-15974060 | MS.gene65953:CDS |
| AAGGCCTAGGAAAAGTTCCC+GGG | 0.537444 | 1.2:-15974817 | MS.gene65953:CDS |
| TGCAAAGCAGTTATTCTGAA+GGG | 0.537602 | 1.2:-15977460 | MS.gene65953:CDS |
| TCTGATCAACAACTCAATGC+AGG | 0.538753 | 1.2:+15974006 | None:intergenic |
| AAGTAAGAGAATCCCTCCTC+TGG | 0.543493 | 1.2:+15974774 | None:intergenic |
| AGACGCTGTATGTCTTGAAA+AGG | 0.545903 | 1.2:-15974113 | MS.gene65953:CDS |
| ATAGGAAGGAGTAATATTGT+TGG | 0.546862 | 1.2:-15973947 | MS.gene65953:CDS |
| GTGCACAGAGGAAGATTGAA+GGG | 0.549369 | 1.2:+15977574 | None:intergenic |
| GGTCCAACCCCACCAGGTAC+AGG | 0.551911 | 1.2:+15973310 | None:intergenic |
| GGCAACCGCTACGACGGCGG+TGG | 0.553606 | 1.2:+15975737 | None:intergenic |
| ATTTGTATTGTTTCACAACA+AGG | 0.554042 | 1.2:+15977411 | None:intergenic |
| GGAGTTCCAAATTTGGTCTG+TGG | 0.555795 | 1.2:-15973557 | MS.gene65953:CDS |
| ACAAGGACCCATCAATTCAT+GGG | 0.556155 | 1.2:-15974640 | MS.gene65953:CDS |
| GTCGTGGGTGGAGTTGAAGA+AGG | 0.560697 | 1.2:-15976444 | MS.gene65953:CDS |
| CGATAACCATCCTCGCAGCT+AGG | 0.562094 | 1.2:+15973388 | None:intergenic |
| TGTGGGAACTGGATAAAGTC+CGG | 0.563582 | 1.2:-15973539 | MS.gene65953:CDS |
| GATATTATAGTTTCAGCTGC+CGG | 0.564692 | 1.2:-15973578 | MS.gene65953:CDS |
| GTGCAAAGCAGTTATTCTGA+AGG | 0.564896 | 1.2:-15977461 | MS.gene65953:CDS |
| AACATCGATCACAGTTGCAC+CGG | 0.566749 | 1.2:+15973520 | None:intergenic |
| GACGGCAACCGCTACGACGG+CGG | 0.571004 | 1.2:+15975734 | None:intergenic |
| AAATCTTGCTTTAAGAGGAA+GGG | 0.571400 | 1.2:-15974059 | MS.gene65953:CDS |
| CATTCTGGAACCATCGCAGT+AGG | 0.572360 | 1.2:+15977376 | None:intergenic |
| GGAGACAACGACTGCAAAGA+CGG | 0.572691 | 1.2:+15975758 | None:intergenic |
| GAGTTCCAAATTTGGTCTGT+GGG | 0.575243 | 1.2:-15973556 | MS.gene65953:CDS |
| AGAGACAACAACCGCAACAA+CGG | 0.575491 | 1.2:+15975785 | None:intergenic |
| TGTCGTCTCCGCCGTTGTTG+CGG | 0.576268 | 1.2:-15975796 | MS.gene65953:CDS |
| AGTGCACAGAGGAAGATTGA+AGG | 0.578586 | 1.2:+15977573 | None:intergenic |
| GGTGCAACTGTGATCGATGT+TGG | 0.583814 | 1.2:-15973518 | MS.gene65953:CDS |
| GTTATTACTCCTGTACCTGG+TGG | 0.584107 | 1.2:-15973319 | MS.gene65953:CDS |
| GTTTATTCCTTGTACCACAA+AGG | 0.584812 | 1.2:-15974029 | MS.gene65953:CDS |
| GGAGACGGCAACCGCTACGA+CGG | 0.585530 | 1.2:+15975731 | None:intergenic |
| TTTGGGACAGCATCTGGACG+AGG | 0.585757 | 1.2:-15974146 | MS.gene65953:intron |
| AGAATGCCGTGGTGATAGGA+AGG | 0.586248 | 1.2:-15973961 | MS.gene65953:CDS |
| TCTGTTATTACTCCTGTACC+TGG | 0.586639 | 1.2:-15973322 | MS.gene65953:CDS |
| CAAGAATCCCATGAATTGAT+GGG | 0.587301 | 1.2:+15974633 | None:intergenic |
| GTCATAGGTCCAACCCCACC+AGG | 0.589287 | 1.2:+15973304 | None:intergenic |
| ACAGACCAAATTTGGAACTC+CGG | 0.591892 | 1.2:+15973559 | None:intergenic |
| TATTACTCCTGTACCTGGTG+GGG | 0.593792 | 1.2:-15973317 | MS.gene65953:CDS |
| GATCTGGAGTTGAGATTATG+GGG | 0.602042 | 1.2:-15973985 | MS.gene65953:CDS |
| GTACGACGGTGACTGTTGCA+TGG | 0.603199 | 1.2:+15973642 | None:intergenic |
| GCAAAGCAGTTATTCTGAAG+GGG | 0.604308 | 1.2:-15977459 | MS.gene65953:CDS |
| CCTAGGAATGGAGGAACAGG+TGG | 0.610037 | 1.2:+15977542 | None:intergenic |
| AACTATAATATCAGCTTCTG+AGG | 0.611600 | 1.2:+15973589 | None:intergenic |
| TAGAAGGTTAGGCCTAGGAA+TGG | 0.615565 | 1.2:+15977530 | None:intergenic |
| AAGGTTAGGCCTAGGAATGG+AGG | 0.615838 | 1.2:+15977533 | None:intergenic |
| TGGAGACAGAGAAACGGAGA+CGG | 0.617113 | 1.2:+15975716 | None:intergenic |
| ACTGCGATGGTTCCAGAATG+TGG | 0.619188 | 1.2:-15977373 | MS.gene65953:CDS |
| CTATTGGAGTTGCAATGTAG+AGG | 0.619611 | 1.2:-15976419 | MS.gene65953:intron |
| GACAACAACCGCAACAACGG+CGG | 0.620410 | 1.2:+15975788 | None:intergenic |
| TGTCTCCACCGCCGTCGTAG+CGG | 0.623064 | 1.2:-15975742 | MS.gene65953:CDS |
| ATTCTGGAACCATCGCAGTA+GGG | 0.626099 | 1.2:+15977377 | None:intergenic |
| TGTTGGAACAATTCCTGTTG+AGG | 0.633352 | 1.2:-15973501 | MS.gene65953:intron |
| AACAATGCACCCCTAAACAA+TGG | 0.633819 | 1.2:-15977631 | MS.gene65953:CDS |
| ATCAATGAACCATTGTTTAG+GGG | 0.635121 | 1.2:+15977622 | None:intergenic |
| TCAGCATCTGCACAATCGGT+AGG | 0.639234 | 1.2:+15974689 | None:intergenic |
| GTGGTACAAGGAATAAACAA+TGG | 0.641093 | 1.2:+15974034 | None:intergenic |
| CCGTTTCTCTGTCTCCATCG+TGG | 0.641433 | 1.2:-15975710 | MS.gene65953:CDS |
| TGTCTTGAAAAGGACGTGGA+TGG | 0.641881 | 1.2:-15974103 | MS.gene65953:CDS |
| TTCTGTAAATGCATGTACGA+CGG | 0.642163 | 1.2:+15973628 | None:intergenic |
| TGATGGAAAGTTGATGGCAA+CGG | 0.644692 | 1.2:-15974882 | MS.gene65953:CDS |
| TGCACAGAGGAAGATTGAAG+GGG | 0.652939 | 1.2:+15977575 | None:intergenic |
| TGCTATCATGAGATTCAACA+AGG | 0.656626 | 1.2:-15974657 | MS.gene65953:CDS |
| ATAGGAAGACGTAGTTCTGG+AGG | 0.664927 | 1.2:-15976474 | MS.gene65953:intron |
| CAAGGCTGCAACAACCACGA+TGG | 0.671718 | 1.2:+15975696 | None:intergenic |
| GCACAGAGGAAGATTGAAGG+GGG | 0.674023 | 1.2:+15977576 | None:intergenic |
| ACCAAAATAACAGCTAACCC+GGG | 0.677885 | 1.2:+15974800 | None:intergenic |
| TGGAAAGATGGAGTGCACAG+AGG | 0.687279 | 1.2:+15977562 | None:intergenic |
| ATTGAATCGACGATACACTT+CGG | 0.699643 | 1.2:+15975824 | None:intergenic |
| CTTTGAAGAAGTCATAAAGG+TGG | 0.705733 | 1.2:-15973347 | MS.gene65953:CDS |
| ATTACTCCTTCCTATCACCA+CGG | 0.705836 | 1.2:+15973955 | None:intergenic |
| AGTGTATCGTCGATTCAATG+TGG | 0.709087 | 1.2:-15975820 | MS.gene65953:CDS |
| TGTATGTCTTGAAAAGGACG+TGG | 0.710007 | 1.2:-15974107 | MS.gene65953:CDS |
| AGAAGTTGGAATGAAGTCTG+TGG | 0.728221 | 1.2:-15974723 | MS.gene65953:CDS |
| GCAACAGGATCCTAGCTGCG+AGG | 0.729473 | 1.2:-15973398 | MS.gene65953:intron |
| GCGATGGTTCCAGAATGTGG+TGG | 0.749553 | 1.2:-15977370 | MS.gene65953:CDS |
| GATTATGGGGAAGAATGCCG+TGG | 0.780443 | 1.2:-15973972 | MS.gene65953:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAATAATTAGACAAATG+AGG | - | chr1.2:15976668-15976687 | MS.gene65953:intron | 15.0% |
| !!! | CTTTTTAATAAAAGTTTAAC+TGG | + | chr1.2:15977163-15977182 | None:intergenic | 15.0% |
| !!! | TTATATATGTTATTTCAAAC+AGG | + | chr1.2:15976438-15976457 | None:intergenic | 15.0% |
| !! | AAAGTTAGAGAATGATAAAA+GGG | - | chr1.2:15974940-15974959 | MS.gene65953:intron | 20.0% |
| !! | AATTAAGAATGTATATTAGG+AGG | + | chr1.2:15975904-15975923 | None:intergenic | 20.0% |
| !! | ACAATTTGTATAACCTTATT+AGG | + | chr1.2:15975849-15975868 | None:intergenic | 20.0% |
| !! | GCAAATTAAGAATGTATATT+AGG | + | chr1.2:15975907-15975926 | None:intergenic | 20.0% |
| !! | TCCAATATTATCATGAAAAT+GGG | - | chr1.2:15976468-15976487 | MS.gene65953:intron | 20.0% |
| !! | TGATATAAATGAGATATGAT+TGG | + | chr1.2:15977052-15977071 | None:intergenic | 20.0% |
| !!! | AATTTAGAATTGTAGTAGAT+TGG | + | chr1.2:15976560-15976579 | None:intergenic | 20.0% |
| !!! | CAATTCTAAATTTTGTTGTT+TGG | - | chr1.2:15976568-15976587 | MS.gene65953:intron | 20.0% |
| !!! | TATTAAAAAGCATGAAATCA+TGG | - | chr1.2:15977173-15977192 | MS.gene65953:intron | 20.0% |
| !!! | TGAAACAACTTTTATTGAAT+TGG | - | chr1.2:15974883-15974902 | MS.gene65953:CDS | 20.0% |
| !!! | TTGAATATGGTTTTTTTAAG+TGG | - | chr1.2:15975475-15975494 | MS.gene65953:intron | 20.0% |
| ! | AAAAATACAATACCCAAAAG+TGG | - | chr1.2:15973652-15973671 | MS.gene65953:intron | 25.0% |
| ! | AAATTTATTTCATGGTGCAT+TGG | - | chr1.2:15973577-15973596 | MS.gene65953:CDS | 25.0% |
| ! | AACTTCTAATTCTTGATAGA+AGG | + | chr1.2:15973382-15973401 | None:intergenic | 25.0% |
| ! | AAGAATGATAGCTTCTTAAA+TGG | + | chr1.2:15975879-15975898 | None:intergenic | 25.0% |
| ! | AATAGTAACCCATCAAATTA+CGG | + | chr1.2:15976332-15976351 | None:intergenic | 25.0% |
| ! | AATTGAATGAAAACTGGAAT+CGG | + | chr1.2:15975022-15975041 | None:intergenic | 25.0% |
| ! | AGTATCAATTGAATGAAAAC+TGG | + | chr1.2:15975028-15975047 | None:intergenic | 25.0% |
| ! | ATTTGTATTGTTTCACAACA+AGG | + | chr1.2:15973485-15973504 | None:intergenic | 25.0% |
| ! | CAAAGTTAGAGAATGATAAA+AGG | - | chr1.2:15974939-15974958 | MS.gene65953:intron | 25.0% |
| ! | CCAATATTATCATGAAAATG+GGG | - | chr1.2:15976469-15976488 | MS.gene65953:intron | 25.0% |
| ! | CCTAATATACATTCCTAATA+AGG | - | chr1.2:15975833-15975852 | MS.gene65953:CDS | 25.0% |
| ! | CCTTATTAGGAATGTATATT+AGG | + | chr1.2:15975836-15975855 | None:intergenic | 25.0% |
| ! | GTCCAATATTATCATGAAAA+TGG | - | chr1.2:15976467-15976486 | MS.gene65953:intron | 25.0% |
| ! | TAATCAAATCCAGTTTAAAC+CGG | + | chr1.2:15974801-15974820 | None:intergenic | 25.0% |
| ! | TACACCTAAAAAGAAATTTG+TGG | + | chr1.2:15977204-15977223 | None:intergenic | 25.0% |
| ! | TAGGATTCTATAAAGTGAAT+AGG | - | chr1.2:15973961-15973980 | MS.gene65953:CDS | 25.0% |
| ! | TATAACTGTTTCCAATGAAA+TGG | - | chr1.2:15975506-15975525 | MS.gene65953:intron | 25.0% |
| ! | TATTAGGAATGTATATTAGG+AGG | + | chr1.2:15975833-15975852 | None:intergenic | 25.0% |
| ! | TCAATAATTGTAGAAAGAGA+AGG | + | chr1.2:15975253-15975272 | None:intergenic | 25.0% |
| ! | TGCAGTTAAAGAATTGAATA+TGG | - | chr1.2:15975462-15975481 | MS.gene65953:intron | 25.0% |
| ! | TGTGAAACAATACAAATTTC+AGG | - | chr1.2:15973488-15973507 | MS.gene65953:intron | 25.0% |
| ! | TGTTAGATTAAGCTATCATA+TGG | + | chr1.2:15974351-15974370 | None:intergenic | 25.0% |
| !! | ATCACCACAAATTTCTTTTT+AGG | - | chr1.2:15977197-15977216 | MS.gene65953:intron | 25.0% |
| !! | CTTTTATCATTCTCTAACTT+TGG | + | chr1.2:15974941-15974960 | None:intergenic | 25.0% |
| !! | GATAATTGTAGAGAAGTTTT+AGG | + | chr1.2:15977096-15977115 | None:intergenic | 25.0% |
| !! | GGTTTTCATCCTATAAATAT+GGG | - | chr1.2:15976811-15976830 | MS.gene65953:intron | 25.0% |
| !! | TAAAGTACTATAAGAGCAAT+GGG | + | chr1.2:15974233-15974252 | None:intergenic | 25.0% |
| !! | TGGTTTTCATCCTATAAATA+TGG | - | chr1.2:15976810-15976829 | MS.gene65953:intron | 25.0% |
| !!! | TAGAAGTTTTGAGTCATTTT+GGG | - | chr1.2:15973394-15973413 | MS.gene65953:CDS | 25.0% |
| !!! | TGATTTGTTGCAAAATGTTT+GGG | - | chr1.2:15976730-15976749 | MS.gene65953:intron | 25.0% |
| !!! | TTAGAAGTTTTGAGTCATTT+TGG | - | chr1.2:15973393-15973412 | MS.gene65953:CDS | 25.0% |
| !!! | TTCTAAATTTTGTTGTTTGG+AGG | - | chr1.2:15976571-15976590 | MS.gene65953:intron | 25.0% |
| !!! | TTGATTTGTTGCAAAATGTT+TGG | - | chr1.2:15976729-15976748 | MS.gene65953:intron | 25.0% |
| AAACAAGTTTACATGTCAGA+TGG | - | chr1.2:15976637-15976656 | MS.gene65953:intron | 30.0% | |
| AAAGATACAGATTCAGAGAA+GGG | - | chr1.2:15975636-15975655 | MS.gene65953:intron | 30.0% | |
| AACTATAATATCAGCTTCTG+AGG | + | chr1.2:15977307-15977326 | None:intergenic | 30.0% | |
| AATTATACTGACAATGCAGA+CGG | + | chr1.2:15977011-15977030 | None:intergenic | 30.0% | |
| ACAGATTCAGAAATTACTTG+TGG | + | chr1.2:15976300-15976319 | None:intergenic | 30.0% | |
| ATAGGAAGGAGTAATATTGT+TGG | - | chr1.2:15976946-15976965 | MS.gene65953:intron | 30.0% | |
| ATATACTTGAGTGCATAATG+TGG | - | chr1.2:15974654-15974673 | MS.gene65953:CDS | 30.0% | |
| ATCAATGAACCATTGTTTAG+GGG | + | chr1.2:15973274-15973293 | None:intergenic | 30.0% | |
| ATCAGTTAACCAAACTTCTA+CGG | - | chr1.2:15977465-15977484 | MS.gene65953:CDS | 30.0% | |
| ATTTGTAGAAGTTTGGCATT+AGG | - | chr1.2:15973942-15973961 | MS.gene65953:CDS | 30.0% | |
| CAATTCAGTACCAATTGAAT+CGG | + | chr1.2:15974989-15975008 | None:intergenic | 30.0% | |
| CAGGTAAGACAAATGAAAAA+AGG | - | chr1.2:15976057-15976076 | MS.gene65953:intron | 30.0% | |
| CATCAATGAACCATTGTTTA+GGG | + | chr1.2:15973275-15973294 | None:intergenic | 30.0% | |
| CTAATTCTTGATAGAAGGTT+AGG | + | chr1.2:15973377-15973396 | None:intergenic | 30.0% | |
| CTTCTCTGTTGTAACAAAAA+AGG | + | chr1.2:15975303-15975322 | None:intergenic | 30.0% | |
| GCAAGATTTCCCATATTTAT+AGG | + | chr1.2:15976823-15976842 | None:intergenic | 30.0% | |
| GCACCATGAAATAAATTTAG+CGG | + | chr1.2:15973575-15973594 | None:intergenic | 30.0% | |
| GGTCTTACATTTGAAAAACA+AGG | + | chr1.2:15973740-15973759 | None:intergenic | 30.0% | |
| GTATATTAGGAGGAAAAGAA+TGG | + | chr1.2:15975823-15975842 | None:intergenic | 30.0% | |
| TAAGAACCAATCCACTTAAA+TGG | - | chr1.2:15974710-15974729 | MS.gene65953:CDS | 30.0% | |
| TCAAACTAGAACCATTTAAG+TGG | + | chr1.2:15974724-15974743 | None:intergenic | 30.0% | |
| TCTCCGCTAAATTTATTTCA+TGG | - | chr1.2:15973569-15973588 | MS.gene65953:CDS | 30.0% | |
| TGGATTTGATTAAAAACTGC+TGG | - | chr1.2:15974809-15974828 | MS.gene65953:CDS | 30.0% | |
| TTGAAAAACAAGGTCATACT+CGG | + | chr1.2:15973730-15973749 | None:intergenic | 30.0% | |
| ! | AAGATCTAAAATAGCTGATC+AGG | - | chr1.2:15976038-15976057 | MS.gene65953:intron | 30.0% |
| ! | ACTTTTTGCCGTAATTTGAT+GGG | - | chr1.2:15976321-15976340 | MS.gene65953:intron | 30.0% |
| ! | AGAAAAGCAGTATTTTCACA+AGG | + | chr1.2:15975218-15975237 | None:intergenic | 30.0% |
| ! | CCCCATTTTCATGATAATAT+TGG | + | chr1.2:15976472-15976491 | None:intergenic | 30.0% |
| ! | GGGATATTTGTATGTTGATT+AGG | + | chr1.2:15973702-15973721 | None:intergenic | 30.0% |
| ! | GTAAAGTACTATAAGAGCAA+TGG | + | chr1.2:15974234-15974253 | None:intergenic | 30.0% |
| ! | GTTTTTCCAAAACAGTTTAC+TGG | - | chr1.2:15975559-15975578 | MS.gene65953:intron | 30.0% |
| !! | AAAAACTGCTGGTTTACAAA+TGG | - | chr1.2:15974820-15974839 | MS.gene65953:CDS | 30.0% |
| !! | AAATCTTGCTTTAAGAGGAA+GGG | - | chr1.2:15976834-15976853 | MS.gene65953:intron | 30.0% |
| !! | AGTGGATTGGTTCTTATATT+TGG | + | chr1.2:15974706-15974725 | None:intergenic | 30.0% |
| !! | GGGTATTGTATTTTTGTTGA+GGG | + | chr1.2:15973647-15973666 | None:intergenic | 30.0% |
| !! | TGGGTATTGTATTTTTGTTG+AGG | + | chr1.2:15973648-15973667 | None:intergenic | 30.0% |
| !!! | AGAAGTTTTGAGTCATTTTG+GGG | - | chr1.2:15973395-15973414 | MS.gene65953:intron | 30.0% |
| !!! | AGTTTTGGTTCAAGAGAAAA+TGG | - | chr1.2:15975537-15975556 | MS.gene65953:intron | 30.0% |
| !!! | CAGTCTTAGGAATTGTTTTT+TGG | - | chr1.2:15974257-15974276 | MS.gene65953:intron | 30.0% |
| !!! | TTTTGGAATAATGCAGTCTT+AGG | - | chr1.2:15974274-15974293 | MS.gene65953:intron | 30.0% |
| ACAAGAATCCCATGAATTGA+TGG | + | chr1.2:15976264-15976283 | None:intergenic | 35.0% | |
| ACCAACATCGTTATTATTGC+AGG | - | chr1.2:15976972-15976991 | MS.gene65953:intron | 35.0% | |
| ACCTGCAATAATAACGATGT+TGG | + | chr1.2:15976976-15976995 | None:intergenic | 35.0% | |
| AGACAAATGAAAAAAGGCCT+AGG | - | chr1.2:15976063-15976082 | MS.gene65953:intron | 35.0% | |
| AGGAATAGATACCTTAGACA+AGG | - | chr1.2:15974294-15974313 | MS.gene65953:intron | 35.0% | |
| AGGTATACTCTACAACTAAC+AGG | + | chr1.2:15973682-15973701 | None:intergenic | 35.0% | |
| AGTACTTTACATGCAGTCTT+AGG | - | chr1.2:15974244-15974263 | MS.gene65953:intron | 35.0% | |
| AGTATTCATTTGTATCTCGC+TGG | - | chr1.2:15973898-15973917 | MS.gene65953:intron | 35.0% | |
| AGTGATTGATGGAAAGTTGA+TGG | - | chr1.2:15976005-15976024 | MS.gene65953:intron | 35.0% | |
| ATTGAATCGACGATACACTT+CGG | + | chr1.2:15975072-15975091 | None:intergenic | 35.0% | |
| CAAGAATCCCATGAATTGAT+GGG | + | chr1.2:15976263-15976282 | None:intergenic | 35.0% | |
| CATGAACCAGAAAAATGGTT+TGG | + | chr1.2:15974750-15974769 | None:intergenic | 35.0% | |
| CCAAACTTCTACAAATCAGA+GGG | + | chr1.2:15973938-15973957 | None:intergenic | 35.0% | |
| CCATCAATGAACCATTGTTT+AGG | + | chr1.2:15973276-15973295 | None:intergenic | 35.0% | |
| CCTAAACAATGGTTCATTGA+TGG | - | chr1.2:15973273-15973292 | MS.gene65953:CDS | 35.0% | |
| CTAGAACCATTTAAGTGGAT+TGG | + | chr1.2:15974719-15974738 | None:intergenic | 35.0% | |
| CTGTTCATGAACCAGAAAAA+TGG | + | chr1.2:15974755-15974774 | None:intergenic | 35.0% | |
| GAAAGATACAGATTCAGAGA+AGG | - | chr1.2:15975635-15975654 | MS.gene65953:intron | 35.0% | |
| GATATTATAGTTTCAGCTGC+CGG | - | chr1.2:15977315-15977334 | MS.gene65953:intron | 35.0% | |
| GCAGTGTAATTTCTCATAGA+AGG | + | chr1.2:15974020-15974039 | None:intergenic | 35.0% | |
| GGTATATGTACTGGAAGAAA+AGG | - | chr1.2:15974495-15974514 | MS.gene65953:intron | 35.0% | |
| GTGGTACAAGGAATAAACAA+TGG | + | chr1.2:15976862-15976881 | None:intergenic | 35.0% | |
| GTTTATTCCTTGTACCACAA+AGG | - | chr1.2:15976864-15976883 | MS.gene65953:intron | 35.0% | |
| TCAAATGTAAGACCTATCAG+AGG | - | chr1.2:15973746-15973765 | MS.gene65953:intron | 35.0% | |
| TCAGAAATTACTTGTGGTAG+AGG | + | chr1.2:15976294-15976313 | None:intergenic | 35.0% | |
| TCTGAATCTGTATCTTTCTC+AGG | + | chr1.2:15975633-15975652 | None:intergenic | 35.0% | |
| TGAAAAACAAGGTCATACTC+GGG | + | chr1.2:15973729-15973748 | None:intergenic | 35.0% | |
| TGCAAAGCAGTTATTCTGAA+GGG | - | chr1.2:15973433-15973452 | MS.gene65953:intron | 35.0% | |
| TGCTATCATGAGATTCAACA+AGG | - | chr1.2:15976236-15976255 | MS.gene65953:intron | 35.0% | |
| TGGATCATGTGAACTATATC+TGG | + | chr1.2:15975589-15975608 | None:intergenic | 35.0% | |
| TTCAACGTAAAATCCGCATA+TGG | - | chr1.2:15973618-15973637 | MS.gene65953:CDS | 35.0% | |
| TTCTACGGATAAAATGCAAC+AGG | - | chr1.2:15977480-15977499 | MS.gene65953:CDS | 35.0% | |
| TTCTGTAAATGCATGTACGA+CGG | + | chr1.2:15977268-15977287 | None:intergenic | 35.0% | |
| TTGTCTTTCTTCCTTGTCTA+AGG | + | chr1.2:15974308-15974327 | None:intergenic | 35.0% | |
| TTTATTTCATGGTGCATTGG+TGG | - | chr1.2:15973580-15973599 | MS.gene65953:CDS | 35.0% | |
| TTTCTCATAGAAGGATGTCA+TGG | + | chr1.2:15974011-15974030 | None:intergenic | 35.0% | |
| ! | AAACTTTTGCGAACTGCAAT+AGG | - | chr1.2:15974401-15974420 | MS.gene65953:intron | 35.0% |
| ! | AGAAGCATAGTAACTGTCAT+AGG | + | chr1.2:15977607-15977626 | None:intergenic | 35.0% |
| ! | AGATCTGGAGTTGAGATTAT+GGG | - | chr1.2:15976907-15976926 | MS.gene65953:intron | 35.0% |
| ! | ATGGGAAATCTTGCTTTAAG+AGG | - | chr1.2:15976829-15976848 | MS.gene65953:intron | 35.0% |
| ! | ATTGAGTTGTTGATCAGATC+TGG | - | chr1.2:15976892-15976911 | MS.gene65953:intron | 35.0% |
| ! | CAATGTAGAGGTATATGTAC+TGG | - | chr1.2:15974486-15974505 | MS.gene65953:intron | 35.0% |
| ! | CGATTCAATTGGTACTGAAT+TGG | - | chr1.2:15974987-15975006 | MS.gene65953:intron | 35.0% |
| ! | CTTTGAAGAAGTCATAAAGG+TGG | - | chr1.2:15977546-15977565 | MS.gene65953:CDS | 35.0% |
| ! | GACTTTTTGCCGTAATTTGA+TGG | - | chr1.2:15976320-15976339 | MS.gene65953:intron | 35.0% |
| ! | GCATTTTATCCGTAGAAGTT+TGG | + | chr1.2:15977477-15977496 | None:intergenic | 35.0% |
| ! | GGAAATCCAGTAAACTGTTT+TGG | + | chr1.2:15975568-15975587 | None:intergenic | 35.0% |
| ! | GTAGAATTGTTTTCTGTCGT+TGG | - | chr1.2:15976507-15976526 | MS.gene65953:intron | 35.0% |
| ! | TACCTTATCTCAAGAAGCAT+TGG | - | chr1.2:15974057-15974076 | MS.gene65953:CDS | 35.0% |
| ! | TGTAGACTATTGGTTGTGTA+TGG | + | chr1.2:15974179-15974198 | None:intergenic | 35.0% |
| ! | TGTTTCCAATGAAATGGACT+GGG | - | chr1.2:15975512-15975531 | MS.gene65953:intron | 35.0% |
| ! | TTATTTCATGGTGCATTGGT+GGG | - | chr1.2:15973581-15973600 | MS.gene65953:CDS | 35.0% |
| ! | TTTATACGCCTGTTAAGTTG+CGG | - | chr1.2:15975766-15975785 | MS.gene65953:CDS | 35.0% |
| !! | AGATAAGGTACTGTAATCCA+TGG | + | chr1.2:15974047-15974066 | None:intergenic | 35.0% |
| !! | ATAAAAGGGTATCGTCGAAT+TGG | - | chr1.2:15974954-15974973 | MS.gene65953:intron | 35.0% |
| !! | GAAATCTTGCTTTAAGAGGA+AGG | - | chr1.2:15976833-15976852 | MS.gene65953:intron | 35.0% |
| !! | GATAAGGTACTGTAATCCAT+GGG | + | chr1.2:15974046-15974065 | None:intergenic | 35.0% |
| !! | GTGATGTTAGTGTCATTTAC+AGG | + | chr1.2:15974157-15974176 | None:intergenic | 35.0% |
| !! | GTGCTTTGAAGAAGTCATAA+AGG | - | chr1.2:15977543-15977562 | MS.gene65953:CDS | 35.0% |
| !! | TCTCATCACTTTTAGACAGA+AGG | + | chr1.2:15974094-15974113 | None:intergenic | 35.0% |
| !! | TGAGATCCAAACCATTTTTC+TGG | - | chr1.2:15974741-15974760 | MS.gene65953:CDS | 35.0% |
| !!! | CAATTTTTTAACTCGCCCTA+TGG | + | chr1.2:15973822-15973841 | None:intergenic | 35.0% |
| !!! | GAAGTTTTGAGTCATTTTGG+GGG | - | chr1.2:15973396-15973415 | MS.gene65953:intron | 35.0% |
| AACAAGGACCCATCAATTCA+TGG | - | chr1.2:15976252-15976271 | MS.gene65953:intron | 40.0% | |
| AACAATGCACCCCTAAACAA+TGG | - | chr1.2:15973262-15973281 | MS.gene65953:CDS | 40.0% | |
| AACATCAGCATCTGCACAAT+CGG | + | chr1.2:15976211-15976230 | None:intergenic | 40.0% | |
| AAGATATCTCGTTGTCAGTG+TGG | + | chr1.2:15973850-15973869 | None:intergenic | 40.0% | |
| ACAAGGACCCATCAATTCAT+GGG | - | chr1.2:15976253-15976272 | MS.gene65953:intron | 40.0% | |
| ACCAAAATAACAGCTAACCC+GGG | + | chr1.2:15976096-15976115 | None:intergenic | 40.0% | |
| ACTATAAGAGCAATGGGACT+TGG | + | chr1.2:15974227-15974246 | None:intergenic | 40.0% | |
| ACTTCGGTGAAAACTGGAAT+CGG | + | chr1.2:15975056-15975075 | None:intergenic | 40.0% | |
| AGAAGTTGGAATGAAGTCTG+TGG | - | chr1.2:15976170-15976189 | MS.gene65953:intron | 40.0% | |
| AGACGCTGTATGTCTTGAAA+AGG | - | chr1.2:15976780-15976799 | MS.gene65953:intron | 40.0% | |
| ATAATTGCCTGCGAAGAAGT+TGG | - | chr1.2:15976156-15976175 | MS.gene65953:intron | 40.0% | |
| ATGAAAGCAACTCCTCTGAT+AGG | + | chr1.2:15973761-15973780 | None:intergenic | 40.0% | |
| ATTACTCCTTCCTATCACCA+CGG | + | chr1.2:15976941-15976960 | None:intergenic | 40.0% | |
| CAAACTGCTACAGTGATTGA+TGG | - | chr1.2:15975994-15976013 | MS.gene65953:intron | 40.0% | |
| CACCAAAATAACAGCTAACC+CGG | + | chr1.2:15976097-15976116 | None:intergenic | 40.0% | |
| CTATTGGAGTTGCAATGTAG+AGG | - | chr1.2:15974474-15974493 | MS.gene65953:intron | 40.0% | |
| CTCCAATGCTTCTTGAGATA+AGG | + | chr1.2:15974062-15974081 | None:intergenic | 40.0% | |
| CTGTATCTTTCTCAGGACTA+GGG | + | chr1.2:15975626-15975645 | None:intergenic | 40.0% | |
| CTGTTTCCAATGAAATGGAC+TGG | - | chr1.2:15975511-15975530 | MS.gene65953:intron | 40.0% | |
| GAGTTCCAAATTTGGTCTGT+GGG | - | chr1.2:15977337-15977356 | MS.gene65953:intron | 40.0% | |
| GCCAAACTTCTACAAATCAG+AGG | + | chr1.2:15973939-15973958 | None:intergenic | 40.0% | |
| GGAGTATAATCAGCTGAGAT+GGG | - | chr1.2:15974609-15974628 | MS.gene65953:intron | 40.0% | |
| GGAGTTGAAGAAGGATCTAT+TGG | - | chr1.2:15974458-15974477 | MS.gene65953:intron | 40.0% | |
| GTACTCTTCTCCGATTCAAT+TGG | - | chr1.2:15974976-15974995 | MS.gene65953:intron | 40.0% | |
| GTGCAAAGCAGTTATTCTGA+AGG | - | chr1.2:15973432-15973451 | MS.gene65953:intron | 40.0% | |
| TCTGATCAACAACTCAATGC+AGG | + | chr1.2:15976890-15976909 | None:intergenic | 40.0% | |
| TCTGTATCTTTCTCAGGACT+AGG | + | chr1.2:15975627-15975646 | None:intergenic | 40.0% | |
| TCTGTTATTACTCCTGTACC+TGG | - | chr1.2:15977571-15977590 | MS.gene65953:CDS | 40.0% | |
| TGGAGTATAATCAGCTGAGA+TGG | - | chr1.2:15974608-15974627 | MS.gene65953:intron | 40.0% | |
| TGTATCTTTCTCAGGACTAG+GGG | + | chr1.2:15975625-15975644 | None:intergenic | 40.0% | |
| TGTATGTCTTGAAAAGGACG+TGG | - | chr1.2:15976786-15976805 | MS.gene65953:intron | 40.0% | |
| TGTTGGAACAATTCCTGTTG+AGG | - | chr1.2:15977392-15977411 | MS.gene65953:CDS | 40.0% | |
| TTATTACTCCTGTACCTGGT+GGG | - | chr1.2:15977575-15977594 | MS.gene65953:CDS | 40.0% | |
| TTTACAGGCAGTGATCATCA+CGG | + | chr1.2:15974142-15974161 | None:intergenic | 40.0% | |
| TTTCAAGACATACAGCGTCT+AGG | + | chr1.2:15976780-15976799 | None:intergenic | 40.0% | |
| ! | AAAATGTTTGGGACAGCATC+TGG | - | chr1.2:15976741-15976760 | MS.gene65953:intron | 40.0% |
| ! | AAAGGCATATGTGGTAGAGT+TGG | - | chr1.2:15974513-15974532 | MS.gene65953:intron | 40.0% |
| ! | ACAGACCAAATTTGGAACTC+CGG | + | chr1.2:15977337-15977356 | None:intergenic | 40.0% |
| ! | ACTAACAGGAGAACCACTTT+TGG | + | chr1.2:15973668-15973687 | None:intergenic | 40.0% |
| ! | ACTGGAAGAAAAGGCATATG+TGG | - | chr1.2:15974504-15974523 | MS.gene65953:intron | 40.0% |
| ! | ATTGTTTAGGGGTGCATTGT+TGG | + | chr1.2:15973263-15973282 | None:intergenic | 40.0% |
| ! | CAGATCTGGAGTTGAGATTA+TGG | - | chr1.2:15976906-15976925 | MS.gene65953:intron | 40.0% |
| ! | CCCTCTGATTTGTAGAAGTT+TGG | - | chr1.2:15973935-15973954 | MS.gene65953:CDS | 40.0% |
| ! | GATCTGGAGTTGAGATTATG+GGG | - | chr1.2:15976908-15976927 | MS.gene65953:intron | 40.0% |
| ! | GCAAAGCAGTTATTCTGAAG+GGG | - | chr1.2:15973434-15973453 | MS.gene65953:intron | 40.0% |
| ! | TTATACGCCTGTTAAGTTGC+GGG | - | chr1.2:15975767-15975786 | MS.gene65953:CDS | 40.0% |
| !! | AGTGTATCGTCGATTCAATG+TGG | - | chr1.2:15975073-15975092 | MS.gene65953:intron | 40.0% |
| !! | CTAACAGGAGAACCACTTTT+GGG | + | chr1.2:15973667-15973686 | None:intergenic | 40.0% |
| !! | TCACTTTTAGACAGAAGGTC+AGG | + | chr1.2:15974089-15974108 | None:intergenic | 40.0% |
| !! | TCTCTTGTTCTCTGAAATGC+AGG | - | chr1.2:15975438-15975457 | MS.gene65953:intron | 40.0% |
| !! | TGATGGAAAGTTGATGGCAA+CGG | - | chr1.2:15976011-15976030 | MS.gene65953:intron | 40.0% |
| !! | TTGAGTCATTTTGGGGGTTT+TGG | - | chr1.2:15973402-15973421 | MS.gene65953:intron | 40.0% |
| !! | TTTCTGGTTCATGAACAGAC+CGG | - | chr1.2:15974757-15974776 | MS.gene65953:CDS | 40.0% |
| !!! | AAACCGGTTTTGAGCCATAT+GGG | + | chr1.2:15974785-15974804 | None:intergenic | 40.0% |
| !!! | GGGTTAGCTGTTATTTTGGT+GGG | - | chr1.2:15976096-15976115 | MS.gene65953:intron | 40.0% |
| !!! | TAAACCGGTTTTGAGCCATA+TGG | + | chr1.2:15974786-15974805 | None:intergenic | 40.0% |
| !!! | TTTTTTAACTCGCCCTATGG+AGG | + | chr1.2:15973819-15973838 | None:intergenic | 40.0% |
| AAAGGCCTAGGAAAAGTTCC+CGG | - | chr1.2:15976075-15976094 | MS.gene65953:intron | 45.0% | |
| AACATCGATCACAGTTGCAC+CGG | + | chr1.2:15977376-15977395 | None:intergenic | 45.0% | |
| AAGTAAGAGAATCCCTCCTC+TGG | + | chr1.2:15976122-15976141 | None:intergenic | 45.0% | |
| AATCACAAGCTCACCTCAAC+AGG | + | chr1.2:15977408-15977427 | None:intergenic | 45.0% | |
| AATCTTGCTCCTCTTCCTCT+AGG | + | chr1.2:15974204-15974223 | None:intergenic | 45.0% | |
| AATTCTCTGCCACCACATTC+TGG | + | chr1.2:15973535-15973554 | None:intergenic | 45.0% | |
| ACAAGGTCATACTCGGGTTA+TGG | + | chr1.2:15973723-15973742 | None:intergenic | 45.0% | |
| ACTGACCCAGTCCATTTCAT+TGG | + | chr1.2:15975520-15975539 | None:intergenic | 45.0% | |
| AGAATGTGGTGGCAGAGAAT+TGG | - | chr1.2:15973534-15973553 | MS.gene65953:CDS | 45.0% | |
| AGAGACAACAACCGCAACAA+CGG | + | chr1.2:15975111-15975130 | None:intergenic | 45.0% | |
| AGTGCACAGAGGAAGATTGA+AGG | + | chr1.2:15973323-15973342 | None:intergenic | 45.0% | |
| ATCATCTCGAAGTCCTCCAT+AGG | - | chr1.2:15973803-15973822 | MS.gene65953:intron | 45.0% | |
| ATCTTGCTCCTCTTCCTCTA+GGG | + | chr1.2:15974203-15974222 | None:intergenic | 45.0% | |
| CAAATTTGGTCTGTGGGAAC+TGG | - | chr1.2:15977343-15977362 | MS.gene65953:intron | 45.0% | |
| CAAGGTCATACTCGGGTTAT+GGG | + | chr1.2:15973722-15973741 | None:intergenic | 45.0% | |
| CAGTTCCCACAGACCAAATT+TGG | + | chr1.2:15977345-15977364 | None:intergenic | 45.0% | |
| CATAATGTGGTCCTGAGTAG+GGG | - | chr1.2:15974667-15974686 | MS.gene65953:CDS | 45.0% | |
| CATTTGTATCTCGCTGGATC+TGG | - | chr1.2:15973904-15973923 | MS.gene65953:intron | 45.0% | |
| CCAATAGTCTACATCCCTAG+AGG | - | chr1.2:15974186-15974205 | MS.gene65953:intron | 45.0% | |
| CGATACACTTCGGTGAAAAC+TGG | + | chr1.2:15975062-15975081 | None:intergenic | 45.0% | |
| CTCAAAACCCGCAACTTAAC+AGG | + | chr1.2:15975777-15975796 | None:intergenic | 45.0% | |
| CTTCATTCCAACTTCTTCGC+AGG | + | chr1.2:15976166-15976185 | None:intergenic | 45.0% | |
| CTTGATAGAAGGTTAGGCCT+AGG | + | chr1.2:15973371-15973390 | None:intergenic | 45.0% | |
| GAAATTACACTGCCATCCCA+TGG | - | chr1.2:15974027-15974046 | MS.gene65953:CDS | 45.0% | |
| GAGGATGGTTATCGTCTAGT+AGG | - | chr1.2:15977514-15977533 | MS.gene65953:CDS | 45.0% | |
| GATGGGATGAACAGGTAAAG+CGG | - | chr1.2:15974626-15974645 | MS.gene65953:CDS | 45.0% | |
| GCAATAGGAAGACGTAGTTC+TGG | - | chr1.2:15974416-15974435 | MS.gene65953:intron | 45.0% | |
| GCATAATGTGGTCCTGAGTA+GGG | - | chr1.2:15974666-15974685 | MS.gene65953:CDS | 45.0% | |
| GCTAAAGTTCAGCAAGCGAT+GGG | + | chr1.2:15976409-15976428 | None:intergenic | 45.0% | |
| GGAGTTCCAAATTTGGTCTG+TGG | - | chr1.2:15977336-15977355 | MS.gene65953:intron | 45.0% | |
| GTGAGAGCAAGTGTGAGAAA+TGG | + | chr1.2:15976372-15976391 | None:intergenic | 45.0% | |
| GTGCACAGAGGAAGATTGAA+GGG | + | chr1.2:15973322-15973341 | None:intergenic | 45.0% | |
| GTTATTACTCCTGTACCTGG+TGG | - | chr1.2:15977574-15977593 | MS.gene65953:CDS | 45.0% | |
| GTTCCCATATGGCTCAAAAC+CGG | - | chr1.2:15974779-15974798 | MS.gene65953:CDS | 45.0% | |
| TACAACTACTCATCCCTCAC+AGG | + | chr1.2:15974559-15974578 | None:intergenic | 45.0% | |
| TACTCCACCAATGATGCTCT+AGG | + | chr1.2:15974595-15974614 | None:intergenic | 45.0% | |
| TAGAAGGTTAGGCCTAGGAA+TGG | + | chr1.2:15973366-15973385 | None:intergenic | 45.0% | |
| TATTACTCCTGTACCTGGTG+GGG | - | chr1.2:15977576-15977595 | MS.gene65953:CDS | 45.0% | |
| TCATCTCGAAGTCCTCCATA+GGG | - | chr1.2:15973804-15973823 | MS.gene65953:intron | 45.0% | |
| TGACGATGATAGACCTGTGA+GGG | - | chr1.2:15974543-15974562 | MS.gene65953:intron | 45.0% | |
| TGCACAGAGGAAGATTGAAG+GGG | + | chr1.2:15973321-15973340 | None:intergenic | 45.0% | |
| TGCATAATGTGGTCCTGAGT+AGG | - | chr1.2:15974665-15974684 | MS.gene65953:CDS | 45.0% | |
| TGCTAAAGTTCAGCAAGCGA+TGG | + | chr1.2:15976410-15976429 | None:intergenic | 45.0% | |
| TGTCTTGAAAAGGACGTGGA+TGG | - | chr1.2:15976790-15976809 | MS.gene65953:intron | 45.0% | |
| TGTGGGAACTGGATAAAGTC+CGG | - | chr1.2:15977354-15977373 | MS.gene65953:intron | 45.0% | |
| TTACTTGTGGTAGAGGAAGC+TGG | + | chr1.2:15976287-15976306 | None:intergenic | 45.0% | |
| TTGACGATGATAGACCTGTG+AGG | - | chr1.2:15974542-15974561 | MS.gene65953:intron | 45.0% | |
| TTGTTGAGGGCAACCATATG+CGG | + | chr1.2:15973634-15973653 | None:intergenic | 45.0% | |
| ! | AGGTACTGTAATCCATGGGA+TGG | + | chr1.2:15974042-15974061 | None:intergenic | 45.0% |
| ! | CCTCTAGGGATGTAGACTAT+TGG | + | chr1.2:15974189-15974208 | None:intergenic | 45.0% |
| ! | CTAGGGGTGTGCAAAAAAAC+TGG | + | chr1.2:15975609-15975628 | None:intergenic | 45.0% |
| ! | GAGGATTAGCACTTGTGTTC+AGG | - | chr1.2:15976687-15976706 | MS.gene65953:intron | 45.0% |
| ! | GGCTCAAAACCGGTTTAAAC+TGG | - | chr1.2:15974789-15974808 | MS.gene65953:CDS | 45.0% |
| ! | TCTTGTGCCTAGAGCATCAT+TGG | - | chr1.2:15974585-15974604 | MS.gene65953:intron | 45.0% |
| ! | TTTTAGACAGAAGGTCAGGC+AGG | + | chr1.2:15974085-15974104 | None:intergenic | 45.0% |
| !! | AAGACGTAGTTCTGGAGGTT+GGG | - | chr1.2:15974424-15974443 | MS.gene65953:intron | 45.0% |
| !! | ATAGGAAGACGTAGTTCTGG+AGG | - | chr1.2:15974419-15974438 | MS.gene65953:intron | 45.0% |
| !! | ATTCTGGAACCATCGCAGTA+GGG | + | chr1.2:15973519-15973538 | None:intergenic | 45.0% |
| !! | CTTCTGAGGTGATCTGTTCA+GGG | + | chr1.2:15977293-15977312 | None:intergenic | 45.0% |
| !! | GTTTTGAGCCATATGGGAAC+CGG | + | chr1.2:15974779-15974798 | None:intergenic | 45.0% |
| !!! | CGGGTTAGCTGTTATTTTGG+TGG | - | chr1.2:15976095-15976114 | MS.gene65953:intron | 45.0% |
| !!! | GAAATGGACTGGGTCAGTTT+TGG | - | chr1.2:15975522-15975541 | MS.gene65953:intron | 45.0% |
| !!! | GTTAAGTTGCGGGTTTTGAG+TGG | - | chr1.2:15975777-15975796 | MS.gene65953:CDS | 45.0% |
| !!! | TCCCGGGTTAGCTGTTATTT+TGG | - | chr1.2:15976092-15976111 | MS.gene65953:intron | 45.0% |
| !!! | TTTTGGGGGTTTTGGCTTGT+TGG | - | chr1.2:15973410-15973429 | MS.gene65953:intron | 45.0% |
| !! | ATAACATATATAATTATTTA+TGG | - | chr1.2:15976445-15976464 | MS.gene65953:CDS | 5.0% |
| AAGGCCTAGGAAAAGTTCCC+GGG | - | chr1.2:15976076-15976095 | MS.gene65953:intron | 50.0% | |
| AAGGTTAGGCCTAGGAATGG+AGG | + | chr1.2:15973363-15973382 | None:intergenic | 50.0% | |
| ACTGCGATGGTTCCAGAATG+TGG | - | chr1.2:15973520-15973539 | MS.gene65953:CDS | 50.0% | |
| AGAATGCCGTGGTGATAGGA+AGG | - | chr1.2:15976932-15976951 | MS.gene65953:intron | 50.0% | |
| AGAGGAAGATTGAAGGGGGA+AGG | + | chr1.2:15973316-15973335 | None:intergenic | 50.0% | |
| AGCTGCCGGAGTTCCAAATT+TGG | - | chr1.2:15977329-15977348 | MS.gene65953:intron | 50.0% | |
| AGGAAGATTGAAGGGGGAAG+GGG | + | chr1.2:15973314-15973333 | None:intergenic | 50.0% | |
| ATGCAGGCCTTTGTGGTACA+AGG | + | chr1.2:15976874-15976893 | None:intergenic | 50.0% | |
| CAACTCAATGCAGGCCTTTG+TGG | + | chr1.2:15976881-15976900 | None:intergenic | 50.0% | |
| CCACGATGGAGACAGAGAAA+CGG | + | chr1.2:15975186-15975205 | None:intergenic | 50.0% | |
| GAGGAAGATTGAAGGGGGAA+GGG | + | chr1.2:15973315-15973334 | None:intergenic | 50.0% | |
| GATTATGGGGAAGAATGCCG+TGG | - | chr1.2:15976921-15976940 | MS.gene65953:intron | 50.0% | |
| GCACAGAGGAAGATTGAAGG+GGG | + | chr1.2:15973320-15973339 | None:intergenic | 50.0% | |
| GGAGACAACGACTGCAAAGA+CGG | + | chr1.2:15975138-15975157 | None:intergenic | 50.0% | |
| GGCATATGTGGTAGAGTTGG+AGG | - | chr1.2:15974516-15974535 | MS.gene65953:intron | 50.0% | |
| GGTGCAACTGTGATCGATGT+TGG | - | chr1.2:15977375-15977394 | MS.gene65953:CDS | 50.0% | |
| GTCTACATCCCTAGAGGAAG+AGG | - | chr1.2:15974192-15974211 | MS.gene65953:intron | 50.0% | |
| GTGATCATCACGGCATTGCT+TGG | + | chr1.2:15974132-15974151 | None:intergenic | 50.0% | |
| GTGGTGGCAGAGAATTGGTA+GGG | - | chr1.2:15973539-15973558 | MS.gene65953:CDS | 50.0% | |
| TCAGCATCTGCACAATCGGT+AGG | + | chr1.2:15976207-15976226 | None:intergenic | 50.0% | |
| TCAGCTGAGATGGGATGAAC+AGG | - | chr1.2:15974618-15974637 | MS.gene65953:CDS | 50.0% | |
| TGGAAAGATGGAGTGCACAG+AGG | + | chr1.2:15973334-15973353 | None:intergenic | 50.0% | |
| TGGAGACAGAGAAACGGAGA+CGG | + | chr1.2:15975180-15975199 | None:intergenic | 50.0% | |
| TGGAGGAACAGGTGGAAAGA+TGG | + | chr1.2:15973346-15973365 | None:intergenic | 50.0% | |
| TGGTGGCAGAGAATTGGTAG+GGG | - | chr1.2:15973540-15973559 | MS.gene65953:CDS | 50.0% | |
| TGTGGTGGCAGAGAATTGGT+AGG | - | chr1.2:15973538-15973557 | MS.gene65953:CDS | 50.0% | |
| ! | CTAACCCGGGAACTTTTCCT+AGG | + | chr1.2:15976083-15976102 | None:intergenic | 50.0% |
| ! | TGAACAGACCGGTTCCCATA+TGG | - | chr1.2:15974768-15974787 | MS.gene65953:CDS | 50.0% |
| ! | TGTGCCTAGAGCATCATTGG+TGG | - | chr1.2:15974588-15974607 | MS.gene65953:intron | 50.0% |
| !! | CATTCTGGAACCATCGCAGT+AGG | + | chr1.2:15973520-15973539 | None:intergenic | 50.0% |
| !! | GAAGACGTAGTTCTGGAGGT+TGG | - | chr1.2:15974423-15974442 | MS.gene65953:intron | 50.0% |
| !! | GCTTCTGAGGTGATCTGTTC+AGG | + | chr1.2:15977294-15977313 | None:intergenic | 50.0% |
| !!! | CTGTTATTTTGGTGGGCCAG+AGG | - | chr1.2:15976103-15976122 | MS.gene65953:intron | 50.0% |
| !!! | TATTTTGGTGGGCCAGAGGA+GGG | - | chr1.2:15976107-15976126 | MS.gene65953:intron | 50.0% |
| !!! | TTATTTTGGTGGGCCAGAGG+AGG | - | chr1.2:15976106-15976125 | MS.gene65953:intron | 50.0% |
| AACCATGCACACCCCTACTC+AGG | + | chr1.2:15974681-15974700 | None:intergenic | 55.0% | |
| AGGCCTAGGAATGGAGGAAC+AGG | + | chr1.2:15973357-15973376 | None:intergenic | 55.0% | |
| CAAGGCTGCAACAACCACGA+TGG | + | chr1.2:15975200-15975219 | None:intergenic | 55.0% | |
| CAGGTTATGCCCTACTGCGA+TGG | - | chr1.2:15973507-15973526 | MS.gene65953:CDS | 55.0% | |
| CCACCTGTTCCTCCATTCCT+AGG | - | chr1.2:15973351-15973370 | MS.gene65953:CDS | 55.0% | |
| CCGTTTCTCTGTCTCCATCG+TGG | - | chr1.2:15975183-15975202 | MS.gene65953:intron | 55.0% | |
| CCTAGGAATGGAGGAACAGG+TGG | + | chr1.2:15973354-15973373 | None:intergenic | 55.0% | |
| CGATAACCATCCTCGCAGCT+AGG | + | chr1.2:15977508-15977527 | None:intergenic | 55.0% | |
| GACAACAACCGCAACAACGG+CGG | + | chr1.2:15975108-15975127 | None:intergenic | 55.0% | |
| GCGATGGTTCCAGAATGTGG+TGG | - | chr1.2:15973523-15973542 | MS.gene65953:CDS | 55.0% | |
| GGGAAGAATGCCGTGGTGAT+AGG | - | chr1.2:15976928-15976947 | MS.gene65953:intron | 55.0% | |
| GGTGGCAGAGAATTGGTAGG+GGG | - | chr1.2:15973541-15973560 | MS.gene65953:CDS | 55.0% | |
| GTACGACGGTGACTGTTGCA+TGG | + | chr1.2:15977254-15977273 | None:intergenic | 55.0% | |
| GTCGTGGGTGGAGTTGAAGA+AGG | - | chr1.2:15974449-15974468 | MS.gene65953:intron | 55.0% | |
| GTGGCAGAGAATTGGTAGGG+GGG | - | chr1.2:15973542-15973561 | MS.gene65953:CDS | 55.0% | |
| TGGCAGAGAATTGGTAGGGG+GGG | - | chr1.2:15973543-15973562 | MS.gene65953:CDS | 55.0% | |
| ! | TCTGGAGGTTGGGTTGTCGT+GGG | - | chr1.2:15974434-15974453 | MS.gene65953:intron | 55.0% |
| ! | TTCTGGAGGTTGGGTTGTCG+TGG | - | chr1.2:15974433-15974452 | MS.gene65953:intron | 55.0% |
| ! | TTTGGGACAGCATCTGGACG+AGG | - | chr1.2:15976747-15976766 | MS.gene65953:intron | 55.0% |
| ACTCCTGTACCTGGTGGGGT+TGG | - | chr1.2:15977580-15977599 | MS.gene65953:CDS | 60.0% | |
| CAGGATCCTAGCTGCGAGGA+TGG | - | chr1.2:15977499-15977518 | MS.gene65953:CDS | 60.0% | |
| GCAACAGGATCCTAGCTGCG+AGG | - | chr1.2:15977495-15977514 | MS.gene65953:CDS | 60.0% | |
| GTCATAGGTCCAACCCCACC+AGG | + | chr1.2:15977592-15977611 | None:intergenic | 60.0% | |
| TGTCGTCTCCGCCGTTGTTG+CGG | - | chr1.2:15975097-15975116 | MS.gene65953:intron | 60.0% | |
| ! | GTCCTGAGTAGGGGTGTGCA+TGG | - | chr1.2:15974676-15974695 | MS.gene65953:CDS | 60.0% |
| GGAGACGGCAACCGCTACGA+CGG | + | chr1.2:15975165-15975184 | None:intergenic | 65.0% | |
| GGTCCAACCCCACCAGGTAC+AGG | + | chr1.2:15977586-15977605 | None:intergenic | 65.0% | |
| TGTCTCCACCGCCGTCGTAG+CGG | - | chr1.2:15975151-15975170 | MS.gene65953:intron | 65.0% | |
| ! | GGAGGTTGGGTTGTCGTGGG+TGG | - | chr1.2:15974437-15974456 | MS.gene65953:intron | 65.0% |
| GACGGCAACCGCTACGACGG+CGG | + | chr1.2:15975162-15975181 | None:intergenic | 70.0% | |
| GGCAACCGCTACGACGGCGG+TGG | + | chr1.2:15975159-15975178 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 15973243 | 15977672 | 15973243 | ID=MS.gene65953 |
| chr1.2 | mRNA | 15973243 | 15977672 | 15973243 | ID=MS.gene65953.t1;Parent=MS.gene65953 |
| chr1.2 | exon | 15977360 | 15977672 | 15977360 | ID=MS.gene65953.t1.exon1;Parent=MS.gene65953.t1 |
| chr1.2 | CDS | 15977360 | 15977672 | 15977360 | ID=cds.MS.gene65953.t1;Parent=MS.gene65953.t1 |
| chr1.2 | exon | 15976420 | 15976482 | 15976420 | ID=MS.gene65953.t1.exon2;Parent=MS.gene65953.t1 |
| chr1.2 | CDS | 15976420 | 15976482 | 15976420 | ID=cds.MS.gene65953.t1;Parent=MS.gene65953.t1 |
| chr1.2 | exon | 15975697 | 15975852 | 15975697 | ID=MS.gene65953.t1.exon3;Parent=MS.gene65953.t1 |
| chr1.2 | CDS | 15975697 | 15975852 | 15975697 | ID=cds.MS.gene65953.t1;Parent=MS.gene65953.t1 |
| chr1.2 | exon | 15974613 | 15974929 | 15974613 | ID=MS.gene65953.t1.exon4;Parent=MS.gene65953.t1 |
| chr1.2 | CDS | 15974613 | 15974929 | 15974613 | ID=cds.MS.gene65953.t1;Parent=MS.gene65953.t1 |
| chr1.2 | exon | 15973922 | 15974158 | 15973922 | ID=MS.gene65953.t1.exon5;Parent=MS.gene65953.t1 |
| chr1.2 | CDS | 15973922 | 15974158 | 15973922 | ID=cds.MS.gene65953.t1;Parent=MS.gene65953.t1 |
| chr1.2 | exon | 15973502 | 15973669 | 15973502 | ID=MS.gene65953.t1.exon6;Parent=MS.gene65953.t1 |
| chr1.2 | CDS | 15973502 | 15973669 | 15973502 | ID=cds.MS.gene65953.t1;Parent=MS.gene65953.t1 |
| chr1.2 | exon | 15973243 | 15973413 | 15973243 | ID=MS.gene65953.t1.exon7;Parent=MS.gene65953.t1 |
| chr1.2 | CDS | 15973243 | 15973413 | 15973243 | ID=cds.MS.gene65953.t1;Parent=MS.gene65953.t1 |
| Gene Sequence |
| Protein sequence |
