Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28549.t1 | XP_013446473.1 | 98.5 | 541 | 7 | 1 | 1 | 540 | 1 | 541 | 0.00E+00 | 1104.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28549.t1 | P29162 | 52.6 | 536 | 240 | 5 | 15 | 537 | 11 | 545 | 8.8e-173 | 608.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28549.t1 | A0A072U3T7 | 98.5 | 541 | 7 | 1 | 1 | 540 | 1 | 541 | 0.0e+00 | 1104.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050338 | MS.gene28549 | 0.851066 | 1.13E-60 | -1.69E-46 |
| MS.gene052129 | MS.gene28549 | 0.813303 | 2.74E-51 | -1.69E-46 |
| MS.gene052308 | MS.gene28549 | 0.804929 | 1.71E-49 | -1.69E-46 |
| MS.gene054941 | MS.gene28549 | 0.812262 | 4.63E-51 | -1.69E-46 |
| MS.gene055731 | MS.gene28549 | 0.806552 | 7.78E-50 | -1.69E-46 |
| MS.gene056694 | MS.gene28549 | 0.802677 | 5.01E-49 | -1.69E-46 |
| MS.gene056697 | MS.gene28549 | 0.839459 | 1.57E-57 | -1.69E-46 |
| MS.gene057669 | MS.gene28549 | 0.805126 | 1.55E-49 | -1.69E-46 |
| MS.gene057717 | MS.gene28549 | 0.806729 | 7.14E-50 | -1.69E-46 |
| MS.gene058382 | MS.gene28549 | 0.804628 | 1.97E-49 | -1.69E-46 |
| MS.gene05926 | MS.gene28549 | 0.874217 | 8.02E-68 | -1.69E-46 |
| MS.gene05960 | MS.gene28549 | 0.805564 | 1.26E-49 | -1.69E-46 |
| MS.gene060405 | MS.gene28549 | 0.805749 | 1.15E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene87346 | MS.gene28549 | PPI |
| MS.gene44958 | MS.gene28549 | PPI |
| MS.gene28548 | MS.gene28549 | PPI |
| MS.gene011879 | MS.gene28549 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28549.t1 | MTR_8g479390 | 98.521 | 541 | 7 | 1 | 1 | 540 | 1 | 541 | 0.0 | 1097 |
| MS.gene28549.t1 | MTR_5g018270 | 82.239 | 518 | 90 | 1 | 22 | 539 | 22 | 537 | 0.0 | 875 |
| MS.gene28549.t1 | MTR_8g479380 | 65.966 | 523 | 175 | 3 | 15 | 535 | 13 | 534 | 0.0 | 730 |
| MS.gene28549.t1 | MTR_4g132320 | 62.453 | 530 | 197 | 1 | 11 | 538 | 11 | 540 | 0.0 | 682 |
| MS.gene28549.t1 | MTR_4g049390 | 60.000 | 520 | 206 | 1 | 22 | 539 | 18 | 537 | 0.0 | 662 |
| MS.gene28549.t1 | MTR_4g075690 | 59.434 | 530 | 210 | 2 | 15 | 539 | 10 | 539 | 0.0 | 659 |
| MS.gene28549.t1 | MTR_4g048350 | 60.000 | 520 | 205 | 2 | 22 | 539 | 18 | 536 | 0.0 | 652 |
| MS.gene28549.t1 | MTR_3g115050 | 59.259 | 540 | 213 | 2 | 7 | 539 | 1 | 540 | 0.0 | 649 |
| MS.gene28549.t1 | MTR_1g026410 | 59.252 | 535 | 216 | 1 | 7 | 539 | 5 | 539 | 0.0 | 645 |
| MS.gene28549.t1 | MTR_2g088080 | 60.194 | 515 | 203 | 1 | 26 | 538 | 25 | 539 | 0.0 | 639 |
| MS.gene28549.t1 | MTR_4g083190 | 54.880 | 543 | 230 | 5 | 1 | 533 | 1 | 538 | 0.0 | 596 |
| MS.gene28549.t1 | MTR_3g083440 | 53.296 | 531 | 236 | 5 | 13 | 533 | 8 | 536 | 0.0 | 571 |
| MS.gene28549.t1 | MTR_3g083430 | 53.296 | 531 | 236 | 5 | 13 | 533 | 8 | 536 | 0.0 | 570 |
| MS.gene28549.t1 | MTR_3g083390 | 53.296 | 531 | 236 | 5 | 13 | 533 | 8 | 536 | 0.0 | 570 |
| MS.gene28549.t1 | MTR_3g083400 | 53.107 | 531 | 237 | 5 | 13 | 533 | 8 | 536 | 0.0 | 567 |
| MS.gene28549.t1 | MTR_3g083450 | 54.038 | 520 | 228 | 4 | 24 | 533 | 19 | 537 | 0.0 | 566 |
| MS.gene28549.t1 | MTR_4g083210 | 52.852 | 526 | 241 | 4 | 14 | 533 | 8 | 532 | 0.0 | 562 |
| MS.gene28549.t1 | MTR_2g088080 | 59.825 | 458 | 182 | 1 | 83 | 538 | 1 | 458 | 0.0 | 555 |
| MS.gene28549.t1 | MTR_4g075690 | 59.361 | 438 | 173 | 2 | 15 | 447 | 10 | 447 | 0.0 | 543 |
| MS.gene28549.t1 | MTR_3g083410 | 52.236 | 492 | 224 | 4 | 52 | 533 | 10 | 500 | 0.0 | 520 |
| MS.gene28549.t1 | MTR_4g101650 | 48.014 | 554 | 260 | 9 | 3 | 534 | 4 | 551 | 1.55e-171 | 498 |
| MS.gene28549.t1 | MTR_3g008580 | 46.835 | 553 | 265 | 8 | 3 | 533 | 7 | 552 | 3.69e-169 | 492 |
| MS.gene28549.t1 | MTR_7g051440 | 49.813 | 536 | 233 | 9 | 28 | 536 | 26 | 552 | 5.39e-167 | 486 |
| MS.gene28549.t1 | MTR_1g090707 | 46.753 | 539 | 271 | 7 | 9 | 534 | 3 | 538 | 1.38e-158 | 465 |
| MS.gene28549.t1 | MTR_4g133150 | 52.913 | 206 | 76 | 3 | 137 | 338 | 23 | 211 | 6.16e-64 | 208 |
| MS.gene28549.t1 | MTR_3g078740 | 26.813 | 593 | 346 | 19 | 15 | 536 | 13 | 588 | 7.06e-53 | 189 |
| MS.gene28549.t1 | MTR_8g091390 | 27.739 | 566 | 343 | 16 | 21 | 537 | 24 | 572 | 1.18e-52 | 188 |
| MS.gene28549.t1 | MTR_3g078700 | 28.108 | 555 | 342 | 17 | 13 | 536 | 11 | 539 | 1.71e-51 | 184 |
| MS.gene28549.t1 | MTR_3g101640 | 29.643 | 560 | 304 | 22 | 6 | 502 | 8 | 540 | 2.23e-50 | 182 |
| MS.gene28549.t1 | MTR_5g020600 | 29.268 | 533 | 312 | 20 | 8 | 492 | 11 | 526 | 2.99e-50 | 181 |
| MS.gene28549.t1 | MTR_5g020620 | 29.962 | 524 | 304 | 20 | 16 | 492 | 14 | 521 | 5.50e-49 | 178 |
| MS.gene28549.t1 | MTR_4g015120 | 26.590 | 519 | 333 | 13 | 14 | 492 | 7 | 517 | 5.65e-48 | 175 |
| MS.gene28549.t1 | MTR_5g069680 | 28.733 | 529 | 316 | 14 | 7 | 492 | 8 | 518 | 1.54e-47 | 174 |
| MS.gene28549.t1 | MTR_3g078730 | 26.944 | 553 | 350 | 17 | 13 | 536 | 11 | 538 | 7.19e-46 | 169 |
| MS.gene28549.t1 | MTR_3g101635 | 27.392 | 533 | 300 | 17 | 32 | 502 | 28 | 535 | 2.21e-44 | 165 |
| MS.gene28549.t1 | MTR_5g083360 | 27.736 | 530 | 321 | 17 | 14 | 492 | 9 | 527 | 3.00e-43 | 162 |
| MS.gene28549.t1 | MTR_3g462760 | 26.761 | 497 | 323 | 11 | 31 | 492 | 26 | 516 | 6.29e-42 | 158 |
| MS.gene28549.t1 | MTR_5g081810 | 25.752 | 532 | 336 | 16 | 45 | 532 | 13 | 529 | 3.22e-41 | 156 |
| MS.gene28549.t1 | MTR_2g008330 | 26.847 | 555 | 341 | 19 | 11 | 512 | 17 | 559 | 7.05e-40 | 153 |
| MS.gene28549.t1 | MTR_5g073210 | 26.515 | 528 | 345 | 16 | 9 | 498 | 4 | 526 | 2.37e-39 | 151 |
| MS.gene28549.t1 | MTR_3g071890 | 26.577 | 523 | 324 | 15 | 14 | 488 | 16 | 526 | 2.47e-39 | 151 |
| MS.gene28549.t1 | MTR_7g065980 | 25.683 | 549 | 348 | 16 | 9 | 505 | 4 | 544 | 1.08e-38 | 149 |
| MS.gene28549.t1 | MTR_7g065970 | 25.709 | 564 | 345 | 19 | 7 | 512 | 3 | 550 | 1.19e-38 | 149 |
| MS.gene28549.t1 | MTR_8g027375 | 23.580 | 581 | 385 | 14 | 1 | 532 | 1 | 571 | 2.99e-34 | 137 |
| MS.gene28549.t1 | MTR_7g062250 | 25.275 | 546 | 341 | 16 | 1 | 492 | 6 | 538 | 4.92e-34 | 136 |
| MS.gene28549.t1 | MTR_5g018290 | 81.818 | 66 | 12 | 0 | 474 | 539 | 5 | 70 | 7.48e-33 | 120 |
| MS.gene28549.t1 | MTR_7g062310 | 25.678 | 553 | 339 | 19 | 31 | 526 | 47 | 584 | 1.25e-31 | 129 |
| MS.gene28549.t1 | MTR_7g058690 | 25.536 | 513 | 326 | 19 | 31 | 492 | 33 | 540 | 2.38e-31 | 128 |
| MS.gene28549.t1 | MTR_7g458880 | 23.063 | 542 | 365 | 15 | 1 | 492 | 1 | 540 | 1.28e-30 | 126 |
| MS.gene28549.t1 | MTR_7g060460 | 24.453 | 548 | 351 | 20 | 1 | 492 | 1 | 541 | 6.03e-30 | 124 |
| MS.gene28549.t1 | MTR_4g019225 | 25.145 | 517 | 316 | 16 | 34 | 492 | 29 | 532 | 3.72e-29 | 122 |
| MS.gene28549.t1 | MTR_4g064530 | 22.635 | 539 | 351 | 16 | 8 | 492 | 19 | 545 | 3.11e-26 | 113 |
| MS.gene28549.t1 | MTR_4g064530 | 22.533 | 537 | 350 | 16 | 8 | 490 | 19 | 543 | 8.24e-25 | 108 |
| MS.gene28549.t1 | MTR_4g133160 | 46.667 | 105 | 42 | 2 | 418 | 522 | 5 | 95 | 1.09e-23 | 95.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28549.t1 | AT5G66920 | 74.324 | 518 | 133 | 0 | 23 | 540 | 29 | 546 | 0.0 | 819 |
| MS.gene28549.t1 | AT4G37160 | 63.873 | 537 | 192 | 2 | 1 | 535 | 1 | 537 | 0.0 | 700 |
| MS.gene28549.t1 | AT2G23630 | 65.571 | 517 | 177 | 1 | 20 | 535 | 24 | 540 | 0.0 | 692 |
| MS.gene28549.t1 | AT2G23630 | 65.571 | 517 | 177 | 1 | 20 | 535 | 19 | 535 | 0.0 | 692 |
| MS.gene28549.t1 | AT4G22010 | 58.856 | 542 | 215 | 3 | 1 | 539 | 1 | 537 | 0.0 | 667 |
| MS.gene28549.t1 | AT1G21850 | 59.546 | 529 | 211 | 3 | 13 | 539 | 10 | 537 | 0.0 | 655 |
| MS.gene28549.t1 | AT1G76160 | 58.634 | 527 | 217 | 1 | 13 | 538 | 10 | 536 | 0.0 | 651 |
| MS.gene28549.t1 | AT1G21860 | 58.254 | 527 | 218 | 2 | 14 | 539 | 12 | 537 | 0.0 | 649 |
| MS.gene28549.t1 | AT1G41830 | 57.685 | 527 | 222 | 1 | 14 | 539 | 12 | 538 | 0.0 | 639 |
| MS.gene28549.t1 | AT4G38420 | 55.618 | 534 | 229 | 3 | 14 | 539 | 13 | 546 | 0.0 | 610 |
| MS.gene28549.t1 | AT3G13400 | 56.401 | 539 | 222 | 5 | 10 | 537 | 6 | 542 | 0.0 | 598 |
| MS.gene28549.t1 | AT3G13400 | 56.401 | 539 | 222 | 5 | 10 | 537 | 6 | 542 | 0.0 | 598 |
| MS.gene28549.t1 | AT1G55570 | 55.000 | 540 | 231 | 4 | 9 | 537 | 7 | 545 | 0.0 | 594 |
| MS.gene28549.t1 | AT1G55560 | 55.000 | 540 | 228 | 5 | 10 | 537 | 5 | 541 | 0.0 | 593 |
| MS.gene28549.t1 | AT3G13390 | 56.298 | 524 | 213 | 6 | 27 | 537 | 24 | 544 | 0.0 | 580 |
| MS.gene28549.t1 | AT4G37160 | 63.029 | 449 | 164 | 2 | 1 | 447 | 1 | 449 | 0.0 | 577 |
| MS.gene28549.t1 | AT4G28090 | 53.131 | 527 | 237 | 6 | 21 | 540 | 19 | 542 | 0.0 | 569 |
| MS.gene28549.t1 | AT5G48450 | 51.927 | 545 | 248 | 7 | 5 | 536 | 3 | 546 | 0.0 | 543 |
| MS.gene28549.t1 | AT5G48450 | 51.927 | 545 | 248 | 7 | 5 | 536 | 3 | 546 | 0.0 | 542 |
| MS.gene28549.t1 | AT4G12420 | 49.358 | 545 | 253 | 6 | 14 | 536 | 8 | 551 | 0.0 | 528 |
| MS.gene28549.t1 | AT4G12420 | 49.358 | 545 | 253 | 6 | 14 | 536 | 8 | 551 | 0.0 | 528 |
| MS.gene28549.t1 | AT4G38420 | 54.371 | 469 | 206 | 3 | 14 | 474 | 13 | 481 | 0.0 | 520 |
| MS.gene28549.t1 | AT1G75790 | 48.998 | 549 | 252 | 7 | 10 | 535 | 1 | 544 | 1.07e-178 | 514 |
| MS.gene28549.t1 | AT5G51480 | 47.637 | 529 | 256 | 6 | 26 | 533 | 23 | 551 | 1.55e-173 | 503 |
| MS.gene28549.t1 | AT4G38420 | 54.525 | 442 | 193 | 3 | 14 | 447 | 13 | 454 | 6.85e-172 | 494 |
| MS.gene28549.t1 | AT4G25240 | 48.195 | 554 | 263 | 9 | 1 | 533 | 1 | 551 | 7.57e-172 | 499 |
| MS.gene28549.t1 | AT4G25240 | 48.195 | 554 | 263 | 9 | 1 | 533 | 1 | 551 | 7.57e-172 | 499 |
| MS.gene28549.t1 | AT4G39830 | 29.131 | 587 | 343 | 17 | 4 | 534 | 10 | 579 | 4.83e-61 | 211 |
| MS.gene28549.t1 | AT5G21105 | 27.863 | 585 | 352 | 18 | 3 | 533 | 8 | 576 | 3.89e-59 | 206 |
| MS.gene28549.t1 | AT5G21105 | 28.598 | 542 | 322 | 17 | 3 | 490 | 8 | 538 | 2.31e-56 | 198 |
| MS.gene28549.t1 | AT5G21100 | 26.944 | 553 | 333 | 15 | 34 | 533 | 27 | 561 | 4.05e-54 | 192 |
| MS.gene28549.t1 | AT5G58910 | 28.731 | 536 | 318 | 17 | 6 | 492 | 7 | 527 | 3.40e-49 | 179 |
| MS.gene28549.t1 | AT5G58910 | 28.918 | 536 | 316 | 18 | 6 | 492 | 7 | 526 | 2.76e-48 | 176 |
| MS.gene28549.t1 | AT2G38080 | 26.545 | 550 | 342 | 17 | 6 | 512 | 8 | 538 | 4.56e-47 | 172 |
| MS.gene28549.t1 | AT4G39830 | 29.006 | 493 | 279 | 15 | 97 | 534 | 6 | 482 | 5.28e-47 | 171 |
| MS.gene28549.t1 | AT4G39830 | 29.006 | 493 | 279 | 15 | 97 | 534 | 8 | 484 | 6.92e-47 | 171 |
| MS.gene28549.t1 | AT5G09360 | 27.664 | 535 | 322 | 15 | 15 | 502 | 22 | 538 | 7.05e-45 | 167 |
| MS.gene28549.t1 | AT5G03260 | 27.239 | 547 | 342 | 18 | 8 | 512 | 5 | 537 | 2.72e-43 | 162 |
| MS.gene28549.t1 | AT5G58910 | 28.974 | 497 | 284 | 17 | 45 | 492 | 7 | 483 | 4.14e-43 | 161 |
| MS.gene28549.t1 | AT5G05390 | 26.346 | 520 | 332 | 14 | 16 | 492 | 14 | 525 | 1.07e-42 | 160 |
| MS.gene28549.t1 | AT4G39830 | 27.992 | 493 | 271 | 15 | 97 | 534 | 8 | 471 | 4.22e-42 | 157 |
| MS.gene28549.t1 | AT5G01190 | 27.063 | 521 | 327 | 14 | 14 | 492 | 9 | 518 | 1.40e-40 | 154 |
| MS.gene28549.t1 | AT2G30210 | 26.148 | 566 | 361 | 18 | 16 | 532 | 13 | 570 | 2.32e-40 | 154 |
| MS.gene28549.t1 | AT5G01190 | 27.629 | 485 | 299 | 13 | 50 | 492 | 30 | 504 | 2.33e-38 | 148 |
| MS.gene28549.t1 | AT5G48100 | 26.829 | 533 | 326 | 19 | 32 | 512 | 23 | 543 | 2.91e-38 | 148 |
| MS.gene28549.t1 | AT2G40370 | 24.954 | 541 | 342 | 14 | 9 | 492 | 7 | 540 | 1.27e-36 | 144 |
| MS.gene28549.t1 | AT5G01050 | 24.539 | 542 | 350 | 14 | 42 | 534 | 39 | 570 | 2.07e-36 | 143 |
| MS.gene28549.t1 | AT1G18140 | 25.187 | 536 | 304 | 21 | 31 | 492 | 29 | 541 | 2.98e-36 | 142 |
| MS.gene28549.t1 | AT3G09220 | 26.079 | 533 | 339 | 16 | 13 | 498 | 9 | 533 | 1.66e-35 | 140 |
| MS.gene28549.t1 | AT5G21105 | 28.613 | 346 | 213 | 10 | 208 | 533 | 54 | 385 | 2.90e-35 | 137 |
| MS.gene28549.t1 | AT5G01040 | 25.800 | 500 | 310 | 14 | 42 | 492 | 39 | 526 | 1.53e-33 | 135 |
| MS.gene28549.t1 | AT2G46570 | 23.497 | 549 | 362 | 12 | 31 | 532 | 32 | 569 | 8.66e-32 | 129 |
| MS.gene28549.t1 | AT2G29130 | 25.547 | 548 | 344 | 19 | 4 | 498 | 3 | 539 | 1.93e-31 | 128 |
| MS.gene28549.t1 | AT5G07130 | 29.508 | 305 | 190 | 10 | 14 | 298 | 9 | 308 | 8.77e-28 | 117 |
| MS.gene28549.t1 | AT2G46570 | 23.984 | 492 | 316 | 12 | 88 | 532 | 4 | 484 | 6.32e-24 | 105 |
| MS.gene28549.t1 | AT3G09220 | 26.077 | 441 | 273 | 14 | 104 | 498 | 3 | 436 | 6.65e-24 | 105 |
| MS.gene28549.t1 | AT5G60020 | 24.265 | 272 | 190 | 5 | 14 | 270 | 5 | 275 | 1.83e-22 | 101 |
| MS.gene28549.t1 | AT5G60020 | 24.265 | 272 | 190 | 5 | 14 | 270 | 5 | 275 | 2.96e-22 | 100 |
| MS.gene28549.t1 | AT5G60020 | 25.641 | 234 | 161 | 4 | 49 | 270 | 11 | 243 | 8.31e-21 | 96.3 |
| MS.gene28549.t1 | AT5G07130 | 28.000 | 225 | 139 | 8 | 94 | 298 | 2 | 223 | 1.10e-14 | 77.0 |
| MS.gene28549.t1 | AT5G07130 | 28.000 | 225 | 139 | 8 | 94 | 298 | 2 | 223 | 1.10e-14 | 77.0 |
Find 146 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGGCAACAATTATATCTT+AGG | 0.125911 | 8.4:+27575144 | MS.gene28549:CDS |
| CTGACCTTGATCACCATTTA+TGG | 0.129038 | 8.4:-27573336 | None:intergenic |
| AATATGGTGGTCCAAGAATT+TGG | 0.183199 | 8.4:-27575059 | None:intergenic |
| TTTGATAAATGGTCAGTTTC+CGG | 0.220532 | 8.4:+27572286 | MS.gene28549:CDS |
| TCTCAATCTTGTCAACAAAT+TGG | 0.240502 | 8.4:+27572346 | MS.gene28549:CDS |
| GTCCTTAGGAGATTGGTTTA+AGG | 0.256327 | 8.4:-27573638 | None:intergenic |
| TTTACATGGACTGTAACTTA+TGG | 0.266390 | 8.4:+27571953 | MS.gene28549:CDS |
| CAAGGGAGTCATATATGTTT+TGG | 0.267120 | 8.4:-27573579 | None:intergenic |
| TCATGGCAAGATGGGGTATT+AGG | 0.271766 | 8.4:+27572522 | MS.gene28549:CDS |
| AATTCAGCACCATTAATTAA+TGG | 0.272587 | 8.4:+27574306 | MS.gene28549:CDS |
| CAAGCTCATTCAACCATAAA+TGG | 0.290434 | 8.4:+27573323 | MS.gene28549:CDS |
| GTTGCTACATGCTGTTGTTT+TGG | 0.293342 | 8.4:+27571883 | MS.gene28549:CDS |
| ATTAATTAATGGTGCTGAAT+TGG | 0.294175 | 8.4:-27574304 | None:intergenic |
| GCTAATACAATTGTCTTTGT+AGG | 0.295105 | 8.4:-27574282 | None:intergenic |
| TAATTTGAGTTTGGAGGTAT+TGG | 0.314497 | 8.4:-27572555 | None:intergenic |
| TTAAGAGAGTCATTGGATTC+TGG | 0.317167 | 8.4:+27573260 | MS.gene28549:CDS |
| AACTCTCACTCCCCTGCTTC+TGG | 0.317235 | 8.4:+27573730 | MS.gene28549:CDS |
| AACAATTATATCTTAGGGTT+TGG | 0.318406 | 8.4:+27575150 | MS.gene28549:CDS |
| GCTGATTACTTCAACATTCC+TGG | 0.318878 | 8.4:+27574390 | MS.gene28549:CDS |
| CATAAAGCAGCTGGAGGGTT+TGG | 0.320330 | 8.4:+27572642 | MS.gene28549:CDS |
| GATAGGTGTACCCAAATTCT+TGG | 0.322587 | 8.4:+27575048 | MS.gene28549:intron |
| CCCACTAATGTATTGCTTTG+TGG | 0.326136 | 8.4:+27575209 | MS.gene28549:CDS |
| TTCTCTTGGCTGGGGTCCAT+TGG | 0.330809 | 8.4:-27574719 | None:intergenic |
| CCACAAGGATCATACCATTA+TGG | 0.335908 | 8.4:+27574249 | MS.gene28549:CDS |
| TTGATAAATGGTCAGTTTCC+GGG | 0.340573 | 8.4:+27572287 | MS.gene28549:CDS |
| ATCCAAAGCATTCCTTCTAA+TGG | 0.345085 | 8.4:+27574432 | MS.gene28549:CDS |
| TGGGTTTGGCCTTGCAGCAT+TGG | 0.345848 | 8.4:-27574229 | None:intergenic |
| AAATTACACCTACAAGTTTC+AGG | 0.351878 | 8.4:+27572572 | MS.gene28549:CDS |
| TTATATATTCTTCTCTTGGC+TGG | 0.366172 | 8.4:-27574729 | None:intergenic |
| TGGTATGATCCTTGTGGGTT+TGG | 0.366351 | 8.4:-27574243 | None:intergenic |
| TTGTAGGTGTAATTTGAGTT+TGG | 0.367723 | 8.4:-27572564 | None:intergenic |
| TGATACAAGCTAGAAGCTTC+AGG | 0.369255 | 8.4:+27573794 | MS.gene28549:CDS |
| ACAGGCATTAAGAGAGTCAT+TGG | 0.370974 | 8.4:+27573253 | MS.gene28549:intron |
| TGGGCAATCAGCTGCTGTTT+TGG | 0.371637 | 8.4:+27573612 | MS.gene28549:CDS |
| GATGATTACAGTTATGGTTT+TGG | 0.372698 | 8.4:+27574696 | MS.gene28549:intron |
| GGAATCTGAGGTCTGCAATC+TGG | 0.372739 | 8.4:+27575108 | MS.gene28549:CDS |
| GACCACCATATTGGTGTCAT+TGG | 0.374487 | 8.4:+27575070 | MS.gene28549:CDS |
| GTATCAAAGACCAATGATAT+TGG | 0.380499 | 8.4:-27573777 | None:intergenic |
| ATGCAATCTTGGCATCTTGA+TGG | 0.383108 | 8.4:+27574537 | MS.gene28549:CDS |
| AAATTCTTGGACCACCATAT+TGG | 0.386847 | 8.4:+27575061 | MS.gene28549:CDS |
| GCTTTATGAAGTTGAGTTGA+TGG | 0.387011 | 8.4:-27572627 | None:intergenic |
| TAAATTATATATTCTTCTCT+TGG | 0.392973 | 8.4:-27574733 | None:intergenic |
| TCACTTTGCTCATTGGTGAT+TGG | 0.396844 | 8.4:+27572727 | MS.gene28549:CDS |
| ATGAAAACACCATGCAATCT+TGG | 0.397311 | 8.4:+27574526 | MS.gene28549:CDS |
| CATAATGGTATGATCCTTGT+GGG | 0.398204 | 8.4:-27574248 | None:intergenic |
| TGTAATAGTCCTTAGGAGAT+TGG | 0.399386 | 8.4:-27573645 | None:intergenic |
| CCTGTGCAGTGTGCCTGGTC+GGG | 0.404349 | 8.4:-27574764 | None:intergenic |
| GACCATTAGAAGGAATGCTT+TGG | 0.417901 | 8.4:-27574434 | None:intergenic |
| TCGATTAACTTCAGAATTCA+AGG | 0.430963 | 8.4:+27573514 | MS.gene28549:CDS |
| ACTCACCAAGTGAGTAGAAA+TGG | 0.431555 | 8.4:-27572374 | None:intergenic |
| ATCTGGGAACGACAATATCT+TGG | 0.433578 | 8.4:+27575125 | MS.gene28549:CDS |
| ATATGGTGGTCCAAGAATTT+GGG | 0.434423 | 8.4:-27575058 | None:intergenic |
| GGAGATTTCACTTTGCTCAT+TGG | 0.438918 | 8.4:+27572720 | MS.gene28549:CDS |
| TCCACTTGGTACTCCTCAGC+AGG | 0.446386 | 8.4:+27571985 | MS.gene28549:CDS |
| TGGGCAACAATTATATCTTA+GGG | 0.446632 | 8.4:+27575145 | MS.gene28549:CDS |
| GAATCCACACTGAATATTCC+AGG | 0.448996 | 8.4:-27574408 | None:intergenic |
| ACATAAGCAGGACCATTAGA+AGG | 0.453110 | 8.4:-27574444 | None:intergenic |
| CTAGGCAAAGGACCAGAAGC+AGG | 0.457793 | 8.4:-27573742 | None:intergenic |
| ATAAAATCATGGAGAAAAGT+TGG | 0.459162 | 8.4:-27574483 | None:intergenic |
| GACCAATGATATTGGTAAGC+AGG | 0.459227 | 8.4:-27573769 | None:intergenic |
| ACCTGTGCAGTGTGCCTGGT+CGG | 0.460863 | 8.4:-27574765 | None:intergenic |
| AGCAAAGTGAAATCTCCATC+AGG | 0.461466 | 8.4:-27572714 | None:intergenic |
| TATATATTCTTCTCTTGGCT+GGG | 0.463167 | 8.4:-27574728 | None:intergenic |
| ATCCTTGGCCTGAAACTTGT+AGG | 0.465914 | 8.4:-27572580 | None:intergenic |
| ATTACGAAGGCTACGTTGAT+CGG | 0.468319 | 8.4:-27575174 | None:intergenic |
| CCATAATGGTATGATCCTTG+TGG | 0.478583 | 8.4:-27574249 | None:intergenic |
| ACCAACCATTTCTACTCACT+TGG | 0.479632 | 8.4:+27572369 | MS.gene28549:CDS |
| GAATCTGAGGTCTGCAATCT+GGG | 0.481200 | 8.4:+27575109 | MS.gene28549:CDS |
| GTTTGGAGGTATTGGACAGT+TGG | 0.481575 | 8.4:-27572547 | None:intergenic |
| TATTGGTAAGCAGGAGGACT+AGG | 0.484687 | 8.4:-27573760 | None:intergenic |
| TCTCCATCAGGGTATGGATA+AGG | 0.485055 | 8.4:-27572702 | None:intergenic |
| AATCTAGGTTACCTTATGGT+TGG | 0.487461 | 8.4:-27572757 | None:intergenic |
| ACCACAAAGCAATACATTAG+TGG | 0.487778 | 8.4:-27575210 | None:intergenic |
| CCTGATGGTCTGCTCATCAA+TGG | 0.488482 | 8.4:+27573299 | MS.gene28549:CDS |
| CCCGACCAGGCACACTGCAC+AGG | 0.488841 | 8.4:+27574764 | MS.gene28549:CDS |
| TCAACCATAAATGGTGATCA+AGG | 0.489856 | 8.4:+27573332 | MS.gene28549:CDS |
| CCACAAAGCAATACATTAGT+GGG | 0.495327 | 8.4:-27575209 | None:intergenic |
| CTGTGCAGTGTGCCTGGTCG+GGG | 0.496443 | 8.4:-27574763 | None:intergenic |
| CCATTGATGAGCAGACCATC+AGG | 0.498849 | 8.4:-27573299 | None:intergenic |
| TTTCAGGCCAAGGATCAGAT+TGG | 0.499961 | 8.4:+27572588 | MS.gene28549:CDS |
| AAACAAGCTCAATAAAATCA+TGG | 0.502856 | 8.4:-27574494 | None:intergenic |
| GCAACGATGTAATAGTCCTT+AGG | 0.503255 | 8.4:-27573652 | None:intergenic |
| ATATATTCTTCTCTTGGCTG+GGG | 0.505075 | 8.4:-27574727 | None:intergenic |
| CTCCTGCTTACCAATATCAT+TGG | 0.509305 | 8.4:+27573767 | MS.gene28549:CDS |
| TAGGTGTAATTTGAGTTTGG+AGG | 0.509800 | 8.4:-27572561 | None:intergenic |
| TATGGAACTCTTTCTCCACT+TGG | 0.512938 | 8.4:+27571971 | MS.gene28549:CDS |
| GTATGTTCCAATCTGATCCT+TGG | 0.513014 | 8.4:-27572595 | None:intergenic |
| GTGAAATCTCCATCAGGGTA+TGG | 0.518841 | 8.4:-27572708 | None:intergenic |
| ATTGCCCAACATGGACATCA+AGG | 0.521623 | 8.4:-27573597 | None:intergenic |
| TCTCTAGTGCAAGCAGAAGA+TGG | 0.523779 | 8.4:+27571920 | MS.gene28549:CDS |
| ACTCAACTTCATAAAGCAGC+TGG | 0.524206 | 8.4:+27572633 | MS.gene28549:CDS |
| TCTGGGAACGACAATATCTT+GGG | 0.524498 | 8.4:+27575126 | MS.gene28549:CDS |
| CACCTACAAGTTTCAGGCCA+AGG | 0.533785 | 8.4:+27572578 | MS.gene28549:CDS |
| AGTTACCTGTGCAGTGTGCC+TGG | 0.536564 | 8.4:-27574769 | None:intergenic |
| ATATTAAACGTGATGTCCAC+TGG | 0.536612 | 8.4:-27575237 | None:intergenic |
| GTTGTCCAATGACACCAATA+TGG | 0.540137 | 8.4:-27575075 | None:intergenic |
| AACCTTAAACCAATCTCCTA+AGG | 0.547455 | 8.4:+27573636 | MS.gene28549:CDS |
| CATTGGACAACCAAGGTATG+TGG | 0.549670 | 8.4:+27575087 | MS.gene28549:CDS |
| TGATAAATGGTCAGTTTCCG+GGG | 0.550238 | 8.4:+27572288 | MS.gene28549:CDS |
| GACTCCCTTGATGTCCATGT+TGG | 0.550780 | 8.4:+27573592 | MS.gene28549:CDS |
| TATGTTCAGAATCTCAAATG+TGG | 0.551025 | 8.4:+27573480 | MS.gene28549:CDS |
| TTGGTACAAGACCAACCATA+AGG | 0.552905 | 8.4:+27572746 | MS.gene28549:CDS |
| ACTAAGTCTAGTTGAGGCCC+CGG | 0.554159 | 8.4:-27572305 | None:intergenic |
| ACCTCAGATTCCACATACCT+TGG | 0.554697 | 8.4:-27575097 | None:intergenic |
| ATCAAGATGCCAAGATTGCA+TGG | 0.556304 | 8.4:-27574535 | None:intergenic |
| AGGGGTTTCAGAGTTTACAT+AGG | 0.557964 | 8.4:-27574358 | None:intergenic |
| ACTCCCTTGATGTCCATGTT+GGG | 0.560495 | 8.4:+27573593 | MS.gene28549:CDS |
| ACTGAGGTAGCTACATAAGC+AGG | 0.561269 | 8.4:-27574456 | None:intergenic |
| GTTCCTTATCCATACCCTGA+TGG | 0.561920 | 8.4:+27572699 | MS.gene28549:CDS |
| CTAAAACTAGTCGAGGTGGA+AGG | 0.565955 | 8.4:+27573544 | MS.gene28549:CDS |
| ATTACGTTACGCTGTTAACA+AGG | 0.568438 | 8.4:+27574332 | MS.gene28549:CDS |
| ATTTAGTCGATGCCCCGACC+AGG | 0.571494 | 8.4:+27574751 | MS.gene28549:CDS |
| CAGCAGCTGATTGCCCAACA+TGG | 0.571608 | 8.4:-27573606 | None:intergenic |
| AAGTAATCAGCAAGCTTGAG+AGG | 0.573168 | 8.4:-27574378 | None:intergenic |
| AGTAATCAGCAAGCTTGAGA+GGG | 0.583635 | 8.4:-27574377 | None:intergenic |
| TAGGCAAAGGACCAGAAGCA+GGG | 0.587628 | 8.4:-27573741 | None:intergenic |
| ATCTAACAGCCAATGCTGCA+AGG | 0.588565 | 8.4:+27574220 | MS.gene28549:CDS |
| CAACTTCATAAAGCAGCTGG+AGG | 0.592120 | 8.4:+27572636 | MS.gene28549:CDS |
| TAAAACTAGTCGAGGTGGAA+GGG | 0.600806 | 8.4:+27573545 | MS.gene28549:CDS |
| TTGCCCAACATGGACATCAA+GGG | 0.613496 | 8.4:-27573596 | None:intergenic |
| AACTTCATAAAGCAGCTGGA+GGG | 0.614826 | 8.4:+27572637 | MS.gene28549:CDS |
| ATGTTCAGAATCTCAAATGT+GGG | 0.615138 | 8.4:+27573481 | MS.gene28549:CDS |
| AGGCAAAGGACCAGAAGCAG+GGG | 0.619105 | 8.4:-27573740 | None:intergenic |
| TTAGTTACTAAGTCTAGTTG+AGG | 0.619241 | 8.4:-27572311 | None:intergenic |
| ACTCTATTACACACCTGCTG+AGG | 0.621011 | 8.4:-27571998 | None:intergenic |
| GCAAAGTGAAATCTCCATCA+GGG | 0.626543 | 8.4:-27572713 | None:intergenic |
| ACCAAGGTATGTGGAATCTG+AGG | 0.626802 | 8.4:+27575096 | MS.gene28549:CDS |
| CTAGGAATGGCATTAAACAA+AGG | 0.626838 | 8.4:+27572493 | MS.gene28549:intron |
| AAATCTCTAGCATTTCCTGA+TGG | 0.629511 | 8.4:+27573284 | MS.gene28549:CDS |
| TTGCTTTGTGGTAAAGCCAG+TGG | 0.631774 | 8.4:+27575221 | MS.gene28549:CDS |
| TACCCTAAAACTAGTCGAGG+TGG | 0.631840 | 8.4:+27573540 | MS.gene28549:CDS |
| ACCAAGTGAGTAGAAATGGT+TGG | 0.645111 | 8.4:-27572370 | None:intergenic |
| GTAATCAGCAAGCTTGAGAG+GGG | 0.652665 | 8.4:-27574376 | None:intergenic |
| CTTAGTAACTAATGAAAACG+TGG | 0.658482 | 8.4:+27572322 | MS.gene28549:CDS |
| TAAGCAGGAGGACTAGGCAA+AGG | 0.659557 | 8.4:-27573754 | None:intergenic |
| ACATACCCTAAAACTAGTCG+AGG | 0.661009 | 8.4:+27573537 | MS.gene28549:CDS |
| GAATGTTATATTCATTACGA+AGG | 0.664979 | 8.4:-27575187 | None:intergenic |
| ACCTGCTGAGGAGTACCAAG+TGG | 0.666374 | 8.4:-27571986 | None:intergenic |
| GCTGCAAGGCCAAACCCACA+AGG | 0.670571 | 8.4:+27574234 | MS.gene28549:CDS |
| CAATGATATTGGTAAGCAGG+AGG | 0.672778 | 8.4:-27573766 | None:intergenic |
| GTCCAATGACACCAATATGG+TGG | 0.674344 | 8.4:-27575072 | None:intergenic |
| CATTCCTGGAATATTCAGTG+TGG | 0.677266 | 8.4:+27574404 | MS.gene28549:CDS |
| GAGAAAAGTTGGCAATACTG+AGG | 0.682631 | 8.4:-27574472 | None:intergenic |
| AAGGATTCTTACAGCAACTG+CGG | 0.701532 | 8.4:+27573693 | MS.gene28549:CDS |
| TTGGTGTCATTGGACAACCA+AGG | 0.743917 | 8.4:+27575080 | MS.gene28549:CDS |
| CTATCATAGATCTGTCATCG+CGG | 0.752376 | 8.4:+27572677 | MS.gene28549:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTAATGAAAAAGTTGAA+TGG | - | chr8.4:27573409-27573428 | None:intergenic | 15.0% |
| !! | ACAAAAAATCATAATTAAAC+GGG | + | chr8.4:27572081-27572100 | MS.gene28549:intron | 15.0% |
| !! | GACAAAAAATCATAATTAAA+CGG | + | chr8.4:27572080-27572099 | MS.gene28549:intron | 15.0% |
| !! | TAAATTATATATTCTTCTCT+TGG | - | chr8.4:27574736-27574755 | None:intergenic | 15.0% |
| !! | TATAAGATATACAATAGATT+TGG | + | chr8.4:27574918-27574937 | MS.gene28549:intron | 15.0% |
| !! | TATTGACATAAGAAAAAATT+GGG | - | chr8.4:27572113-27572132 | None:intergenic | 15.0% |
| !! | TTACAAATGTTAATATCATA+TGG | - | chr8.4:27574985-27575004 | None:intergenic | 15.0% |
| !!! | AGAGTTTTTTTTTTTTTCTA+AGG | + | chr8.4:27572016-27572035 | MS.gene28549:intron | 15.0% |
| !!! | ATATTTTCTCAAAAATAAAG+TGG | + | chr8.4:27573160-27573179 | MS.gene28549:intron | 15.0% |
| !!! | ATTTGTAATATGTTATCTTT+TGG | + | chr8.4:27574997-27575016 | MS.gene28549:intron | 15.0% |
| !!! | TAACATTTTTATTGTAAACT+AGG | + | chr8.4:27572475-27572494 | MS.gene28549:intron | 15.0% |
| !!! | TGATATTTTATTTGAGAAAA+TGG | + | chr8.4:27572450-27572469 | MS.gene28549:intron | 15.0% |
| !! | AGAACATAAAGATGAATATT+AGG | - | chr8.4:27573227-27573246 | None:intergenic | 20.0% |
| !! | ATAAAAAATGTGATGTTAAG+TGG | + | chr8.4:27573129-27573148 | MS.gene28549:intron | 20.0% |
| !! | ATGGATACTTAAACAAAATT+AGG | - | chr8.4:27573850-27573869 | None:intergenic | 20.0% |
| !! | GAACATAAAGATGAATATTA+GGG | - | chr8.4:27573226-27573245 | None:intergenic | 20.0% |
| !! | GATAAATTATTGCAAACTTT+AGG | - | chr8.4:27574174-27574193 | None:intergenic | 20.0% |
| !! | TGAAAATTTAGTAGCTATTA+TGG | - | chr8.4:27573869-27573888 | None:intergenic | 20.0% |
| !! | TTAAACAAAGGAAAAATTCA+TGG | + | chr8.4:27572505-27572524 | MS.gene28549:CDS | 20.0% |
| !!! | ATGGATACAAATATTTTACA+TGG | + | chr8.4:27571939-27571958 | MS.gene28549:CDS | 20.0% |
| !!! | CGTAATTTTCCATTAATTAA+TGG | - | chr8.4:27574318-27574337 | None:intergenic | 20.0% |
| !!! | GTATCTAATTTTTGTATTGA+AGG | - | chr8.4:27574089-27574108 | None:intergenic | 20.0% |
| !!! | GTATTGACATAAGAAAAAAT+TGG | - | chr8.4:27572114-27572133 | None:intergenic | 20.0% |
| !!! | GTTCAATTTTGTATAGAAAA+TGG | - | chr8.4:27572796-27572815 | None:intergenic | 20.0% |
| !!! | TCTATATCTTTTATTTCAGA+TGG | + | chr8.4:27574196-27574215 | MS.gene28549:intron | 20.0% |
| !!! | TTTTAGGTGATTTTGATAAA+TGG | + | chr8.4:27572275-27572294 | MS.gene28549:intron | 20.0% |
| !!! | TTTTGGTACTTCATTTTTTT+AGG | + | chr8.4:27572259-27572278 | MS.gene28549:intron | 20.0% |
| !!! | TTTTTATTGTAAACTAGGAA+TGG | + | chr8.4:27572480-27572499 | MS.gene28549:intron | 20.0% |
| ! | AAACAAGCTCAATAAAATCA+TGG | - | chr8.4:27574497-27574516 | None:intergenic | 25.0% |
| ! | AACAATTATATCTTAGGGTT+TGG | + | chr8.4:27575150-27575169 | MS.gene28549:CDS | 25.0% |
| ! | AATTCAGCACCATTAATTAA+TGG | + | chr8.4:27574306-27574325 | MS.gene28549:CDS | 25.0% |
| ! | ATAAAATCATGGAGAAAAGT+TGG | - | chr8.4:27574486-27574505 | None:intergenic | 25.0% |
| ! | GAAGTTAGAAAGTTATAACA+TGG | - | chr8.4:27572820-27572839 | None:intergenic | 25.0% |
| ! | GAATGTTATATTCATTACGA+AGG | - | chr8.4:27575190-27575209 | None:intergenic | 25.0% |
| ! | TAGAAATCAAACTTTGTACT+CGG | + | chr8.4:27574802-27574821 | MS.gene28549:intron | 25.0% |
| ! | TATTGTGATGATTACAGTTA+TGG | + | chr8.4:27574690-27574709 | MS.gene28549:intron | 25.0% |
| !! | ATTAATTAATGGTGCTGAAT+TGG | - | chr8.4:27574307-27574326 | None:intergenic | 25.0% |
| !! | CAATTTTGTATAGAAAATGG+AGG | - | chr8.4:27572793-27572812 | None:intergenic | 25.0% |
| !! | TCTTTATGTTCTGATTTTAC+AGG | + | chr8.4:27573235-27573254 | MS.gene28549:intron | 25.0% |
| !!! | AACTTTAGGTTTGTTGATTT+TGG | - | chr8.4:27574160-27574179 | None:intergenic | 25.0% |
| !!! | ATAGCTACTAAATTTTCAAG+AGG | + | chr8.4:27573871-27573890 | MS.gene28549:intron | 25.0% |
| !!! | ATCTTGATGGTTATGATTTT+TGG | + | chr8.4:27574550-27574569 | MS.gene28549:CDS | 25.0% |
| !!! | CATGTTCAATTAGTTGATAA+CGG | - | chr8.4:27574041-27574060 | None:intergenic | 25.0% |
| !!! | CGTTGCTTAAAATTGTTTTA+AGG | + | chr8.4:27574645-27574664 | MS.gene28549:intron | 25.0% |
| !!! | TAGGAGTTATTTTTCCATAA+TGG | - | chr8.4:27574266-27574285 | None:intergenic | 25.0% |
| !!! | TCTACTTTTTTGCAAATTCT+AGG | + | chr8.4:27573379-27573398 | MS.gene28549:intron | 25.0% |
| !!! | TCTTGATGGTTATGATTTTT+GGG | + | chr8.4:27574551-27574570 | MS.gene28549:CDS | 25.0% |
| !!! | TGAAGTCTAATCTAAAGTTT+TGG | + | chr8.4:27572242-27572261 | MS.gene28549:intron | 25.0% |
| !!! | TGCTTAAAATTGTTTTAAGG+CGG | + | chr8.4:27574648-27574667 | MS.gene28549:intron | 25.0% |
| AAAATAAAGTGGACCTCAAT+AGG | + | chr8.4:27573171-27573190 | MS.gene28549:intron | 30.0% | |
| AAATTACACCTACAAGTTTC+AGG | + | chr8.4:27572572-27572591 | MS.gene28549:CDS | 30.0% | |
| AACAAGTTTCTTCAGATTTC+AGG | - | chr8.4:27573916-27573935 | None:intergenic | 30.0% | |
| ATACTTAGTTGCTTACTTTC+AGG | + | chr8.4:27573448-27573467 | MS.gene28549:intron | 30.0% | |
| ATGTTCAGAATCTCAAATGT+GGG | + | chr8.4:27573481-27573500 | MS.gene28549:CDS | 30.0% | |
| CAATAGATTTGGATTGTGTA+CGG | + | chr8.4:27574929-27574948 | MS.gene28549:intron | 30.0% | |
| CTTAGTAACTAATGAAAACG+TGG | + | chr8.4:27572322-27572341 | MS.gene28549:CDS | 30.0% | |
| GAATTAAGAAAGACCTATTG+AGG | - | chr8.4:27573187-27573206 | None:intergenic | 30.0% | |
| GCTAATACAATTGTCTTTGT+AGG | - | chr8.4:27574285-27574304 | None:intergenic | 30.0% | |
| GTATCAAAGACCAATGATAT+TGG | - | chr8.4:27573780-27573799 | None:intergenic | 30.0% | |
| TAAGAAAATCAGCACATCAA+CGG | - | chr8.4:27573023-27573042 | None:intergenic | 30.0% | |
| TATATATTCTTCTCTTGGCT+GGG | - | chr8.4:27574731-27574750 | None:intergenic | 30.0% | |
| TATGTTCAGAATCTCAAATG+TGG | + | chr8.4:27573480-27573499 | MS.gene28549:CDS | 30.0% | |
| TCGATTAACTTCAGAATTCA+AGG | + | chr8.4:27573514-27573533 | MS.gene28549:CDS | 30.0% | |
| TCTCAATCTTGTCAACAAAT+TGG | + | chr8.4:27572346-27572365 | MS.gene28549:CDS | 30.0% | |
| TGGGCAACAATTATATCTTA+GGG | + | chr8.4:27575145-27575164 | MS.gene28549:CDS | 30.0% | |
| TTAGTTACTAAGTCTAGTTG+AGG | - | chr8.4:27572314-27572333 | None:intergenic | 30.0% | |
| TTATATATTCTTCTCTTGGC+TGG | - | chr8.4:27574732-27574751 | None:intergenic | 30.0% | |
| TTGGGCAACAATTATATCTT+AGG | + | chr8.4:27575144-27575163 | MS.gene28549:CDS | 30.0% | |
| TTTAGCGCAAATGATTAGTA+TGG | - | chr8.4:27574856-27574875 | None:intergenic | 30.0% | |
| TTTGATAAATGGTCAGTTTC+CGG | + | chr8.4:27572286-27572305 | MS.gene28549:CDS | 30.0% | |
| ! | GATGATTACAGTTATGGTTT+TGG | + | chr8.4:27574696-27574715 | MS.gene28549:intron | 30.0% |
| ! | TAATTTGAGTTTGGAGGTAT+TGG | - | chr8.4:27572558-27572577 | None:intergenic | 30.0% |
| ! | TATCTTTTGGTATGCTTACT+TGG | + | chr8.4:27575010-27575029 | MS.gene28549:intron | 30.0% |
| ! | TTGTAGGTGTAATTTGAGTT+TGG | - | chr8.4:27572567-27572586 | None:intergenic | 30.0% |
| ! | TTTACATGGACTGTAACTTA+TGG | + | chr8.4:27571953-27571972 | MS.gene28549:CDS | 30.0% |
| !! | AACATGATTTGGATTTTCTG+CGG | - | chr8.4:27573071-27573090 | None:intergenic | 30.0% |
| !! | AACCAATTTTGATCTGACAT+CGG | + | chr8.4:27573969-27573988 | MS.gene28549:intron | 30.0% |
| AAATCTCTAGCATTTCCTGA+TGG | + | chr8.4:27573284-27573303 | MS.gene28549:CDS | 35.0% | |
| AAATTCTTGGACCACCATAT+TGG | + | chr8.4:27575061-27575080 | MS.gene28549:CDS | 35.0% | |
| AACCTTAAACCAATCTCCTA+AGG | + | chr8.4:27573636-27573655 | MS.gene28549:CDS | 35.0% | |
| AAGTTTCTTCAGATTTCAGG+TGG | - | chr8.4:27573913-27573932 | None:intergenic | 35.0% | |
| AATATGGTGGTCCAAGAATT+TGG | - | chr8.4:27575062-27575081 | None:intergenic | 35.0% | |
| AATATTAACCTCTGTTGCGA+AGG | + | chr8.4:27572846-27572865 | MS.gene28549:intron | 35.0% | |
| AATCTAGGTTACCTTATGGT+TGG | - | chr8.4:27572760-27572779 | None:intergenic | 35.0% | |
| ACCACAAAGCAATACATTAG+TGG | - | chr8.4:27575213-27575232 | None:intergenic | 35.0% | |
| ACCATAAGGTAACCTAGATT+AGG | + | chr8.4:27572760-27572779 | MS.gene28549:intron | 35.0% | |
| ACTCGTGTTACAACATGATT+TGG | - | chr8.4:27573082-27573101 | None:intergenic | 35.0% | |
| AGGAAAAATTCATGGCAAGA+TGG | + | chr8.4:27572513-27572532 | MS.gene28549:CDS | 35.0% | |
| ATATATTCTTCTCTTGGCTG+GGG | - | chr8.4:27574730-27574749 | None:intergenic | 35.0% | |
| ATATGGTGGTCCAAGAATTT+GGG | - | chr8.4:27575061-27575080 | None:intergenic | 35.0% | |
| ATGAAAACACCATGCAATCT+TGG | + | chr8.4:27574526-27574545 | MS.gene28549:CDS | 35.0% | |
| ATTACGTTACGCTGTTAACA+AGG | + | chr8.4:27574332-27574351 | MS.gene28549:CDS | 35.0% | |
| CAAGCTCATTCAACCATAAA+TGG | + | chr8.4:27573323-27573342 | MS.gene28549:CDS | 35.0% | |
| CATAATGGTATGATCCTTGT+GGG | - | chr8.4:27574251-27574270 | None:intergenic | 35.0% | |
| CCACAAAGCAATACATTAGT+GGG | - | chr8.4:27575212-27575231 | None:intergenic | 35.0% | |
| CTAGGAATGGCATTAAACAA+AGG | + | chr8.4:27572493-27572512 | MS.gene28549:intron | 35.0% | |
| GAAAAATTCATGGCAAGATG+GGG | + | chr8.4:27572515-27572534 | MS.gene28549:CDS | 35.0% | |
| GGAAAAATTCATGGCAAGAT+GGG | + | chr8.4:27572514-27572533 | MS.gene28549:CDS | 35.0% | |
| GGTGTGCTACAAATTATGAT+AGG | + | chr8.4:27575031-27575050 | MS.gene28549:intron | 35.0% | |
| TCAACCATAAATGGTGATCA+AGG | + | chr8.4:27573332-27573351 | MS.gene28549:CDS | 35.0% | |
| TCATTTGCGCTAAATTTCGA+TGG | + | chr8.4:27574862-27574881 | MS.gene28549:intron | 35.0% | |
| TCTATTCTCACATAGCGTAA+TGG | + | chr8.4:27572140-27572159 | MS.gene28549:intron | 35.0% | |
| TGTAATAGTCCTTAGGAGAT+TGG | - | chr8.4:27573648-27573667 | None:intergenic | 35.0% | |
| TGTATTGAAGGTCTACTTGA+TGG | - | chr8.4:27574077-27574096 | None:intergenic | 35.0% | |
| TTAAGAGAGTCATTGGATTC+TGG | + | chr8.4:27573260-27573279 | MS.gene28549:CDS | 35.0% | |
| TTGATAAATGGTCAGTTTCC+GGG | + | chr8.4:27572287-27572306 | MS.gene28549:CDS | 35.0% | |
| ! | ACGCTTTTACGGTACATATT+TGG | + | chr8.4:27572058-27572077 | MS.gene28549:intron | 35.0% |
| ! | ATCCAAAGCATTCCTTCTAA+TGG | + | chr8.4:27574432-27574451 | MS.gene28549:CDS | 35.0% |
| ! | ATCGATATGTCACGCTTTTA+CGG | + | chr8.4:27572047-27572066 | MS.gene28549:intron | 35.0% |
| ! | CAAGGGAGTCATATATGTTT+TGG | - | chr8.4:27573582-27573601 | None:intergenic | 35.0% |
| ! | CATAGCGTAATGGTCAATTT+TGG | + | chr8.4:27572150-27572169 | MS.gene28549:intron | 35.0% |
| ! | TAGGTGTAATTTGAGTTTGG+AGG | - | chr8.4:27572564-27572583 | None:intergenic | 35.0% |
| !! | CTTCAACAAGATTTTCGAGA+AGG | + | chr8.4:27573674-27573693 | MS.gene28549:CDS | 35.0% |
| !! | GCTTTATGAAGTTGAGTTGA+TGG | - | chr8.4:27572630-27572649 | None:intergenic | 35.0% |
| !!! | GGTTATGATTTTTGGGTTGT+GGG | + | chr8.4:27574558-27574577 | MS.gene28549:CDS | 35.0% |
| !!! | GTTATGATTTTTGGGTTGTG+GGG | + | chr8.4:27574559-27574578 | MS.gene28549:CDS | 35.0% |
| !!! | TGGTTATGATTTTTGGGTTG+TGG | + | chr8.4:27574557-27574576 | MS.gene28549:CDS | 35.0% |
| AACTTCATAAAGCAGCTGGA+GGG | + | chr8.4:27572637-27572656 | MS.gene28549:CDS | 40.0% | |
| AAGGATTCTTACAGCAACTG+CGG | + | chr8.4:27573693-27573712 | MS.gene28549:CDS | 40.0% | |
| AAGTAATCAGCAAGCTTGAG+AGG | - | chr8.4:27574381-27574400 | None:intergenic | 40.0% | |
| ACAGGCATTAAGAGAGTCAT+TGG | + | chr8.4:27573253-27573272 | MS.gene28549:intron | 40.0% | |
| ACATAAGCAGGACCATTAGA+AGG | - | chr8.4:27574447-27574466 | None:intergenic | 40.0% | |
| ACATACCCTAAAACTAGTCG+AGG | + | chr8.4:27573537-27573556 | MS.gene28549:CDS | 40.0% | |
| ACCAACCATTTCTACTCACT+TGG | + | chr8.4:27572369-27572388 | MS.gene28549:CDS | 40.0% | |
| ACCAAGTGAGTAGAAATGGT+TGG | - | chr8.4:27572373-27572392 | None:intergenic | 40.0% | |
| ACTCAACTTCATAAAGCAGC+TGG | + | chr8.4:27572633-27572652 | MS.gene28549:CDS | 40.0% | |
| ACTCACCAAGTGAGTAGAAA+TGG | - | chr8.4:27572377-27572396 | None:intergenic | 40.0% | |
| AGCAAAGTGAAATCTCCATC+AGG | - | chr8.4:27572717-27572736 | None:intergenic | 40.0% | |
| AGGGGTTTCAGAGTTTACAT+AGG | - | chr8.4:27574361-27574380 | None:intergenic | 40.0% | |
| AGTAATCAGCAAGCTTGAGA+GGG | - | chr8.4:27574380-27574399 | None:intergenic | 40.0% | |
| ATCAAGATGCCAAGATTGCA+TGG | - | chr8.4:27574538-27574557 | None:intergenic | 40.0% | |
| ATCTGGGAACGACAATATCT+TGG | + | chr8.4:27575125-27575144 | MS.gene28549:CDS | 40.0% | |
| ATGCAATCTTGGCATCTTGA+TGG | + | chr8.4:27574537-27574556 | MS.gene28549:CDS | 40.0% | |
| ATTACGAAGGCTACGTTGAT+CGG | - | chr8.4:27575177-27575196 | None:intergenic | 40.0% | |
| ATTGAAGGTCTACTTGATGG+TGG | - | chr8.4:27574074-27574093 | None:intergenic | 40.0% | |
| CAATGATATTGGTAAGCAGG+AGG | - | chr8.4:27573769-27573788 | None:intergenic | 40.0% | |
| CATTCCTGGAATATTCAGTG+TGG | + | chr8.4:27574404-27574423 | MS.gene28549:CDS | 40.0% | |
| CCACAAGGATCATACCATTA+TGG | + | chr8.4:27574249-27574268 | MS.gene28549:CDS | 40.0% | |
| CCATAATGGTATGATCCTTG+TGG | - | chr8.4:27574252-27574271 | None:intergenic | 40.0% | |
| CCCACTAATGTATTGCTTTG+TGG | + | chr8.4:27575209-27575228 | MS.gene28549:CDS | 40.0% | |
| CTATCATAGATCTGTCATCG+CGG | + | chr8.4:27572677-27572696 | MS.gene28549:CDS | 40.0% | |
| CTCCTGCTTACCAATATCAT+TGG | + | chr8.4:27573767-27573786 | MS.gene28549:CDS | 40.0% | |
| CTGACCTTGATCACCATTTA+TGG | - | chr8.4:27573339-27573358 | None:intergenic | 40.0% | |
| GAATCCACACTGAATATTCC+AGG | - | chr8.4:27574411-27574430 | None:intergenic | 40.0% | |
| GACCAATGATATTGGTAAGC+AGG | - | chr8.4:27573772-27573791 | None:intergenic | 40.0% | |
| GACCATTAGAAGGAATGCTT+TGG | - | chr8.4:27574437-27574456 | None:intergenic | 40.0% | |
| GAGAAAAGTTGGCAATACTG+AGG | - | chr8.4:27574475-27574494 | None:intergenic | 40.0% | |
| GATAGGTGTACCCAAATTCT+TGG | + | chr8.4:27575048-27575067 | MS.gene28549:intron | 40.0% | |
| GCAAAGTGAAATCTCCATCA+GGG | - | chr8.4:27572716-27572735 | None:intergenic | 40.0% | |
| GCAACGATGTAATAGTCCTT+AGG | - | chr8.4:27573655-27573674 | None:intergenic | 40.0% | |
| GCCTAATCTAGGTTACCTTA+TGG | - | chr8.4:27572764-27572783 | None:intergenic | 40.0% | |
| GCTGATTACTTCAACATTCC+TGG | + | chr8.4:27574390-27574409 | MS.gene28549:CDS | 40.0% | |
| GGAGATTTCACTTTGCTCAT+TGG | + | chr8.4:27572720-27572739 | MS.gene28549:CDS | 40.0% | |
| GTATGTTCCAATCTGATCCT+TGG | - | chr8.4:27572598-27572617 | None:intergenic | 40.0% | |
| GTCCGATGTCAGATCAAAAT+TGG | - | chr8.4:27573974-27573993 | None:intergenic | 40.0% | |
| GTTGTCCAATGACACCAATA+TGG | - | chr8.4:27575078-27575097 | None:intergenic | 40.0% | |
| GTTGTTGGATCGAGATAGAA+CGG | + | chr8.4:27572915-27572934 | MS.gene28549:intron | 40.0% | |
| TAAAACTAGTCGAGGTGGAA+GGG | + | chr8.4:27573545-27573564 | MS.gene28549:CDS | 40.0% | |
| TATGGAACTCTTTCTCCACT+TGG | + | chr8.4:27571971-27571990 | MS.gene28549:CDS | 40.0% | |
| TCTGGGAACGACAATATCTT+GGG | + | chr8.4:27575126-27575145 | MS.gene28549:CDS | 40.0% | |
| TGATAAATGGTCAGTTTCCG+GGG | + | chr8.4:27572288-27572307 | MS.gene28549:CDS | 40.0% | |
| TGATACAAGCTAGAAGCTTC+AGG | + | chr8.4:27573794-27573813 | MS.gene28549:CDS | 40.0% | |
| TGTATGCAGTCAGTCACATT+TGG | + | chr8.4:27574958-27574977 | MS.gene28549:intron | 40.0% | |
| TTGGTACAAGACCAACCATA+AGG | + | chr8.4:27572746-27572765 | MS.gene28549:CDS | 40.0% | |
| ! | GCATGGTGTTTTCATCATTC+TGG | - | chr8.4:27574521-27574540 | None:intergenic | 40.0% |
| ! | TCACTTTGCTCATTGGTGAT+TGG | + | chr8.4:27572727-27572746 | MS.gene28549:CDS | 40.0% |
| !! | GTCCTTAGGAGATTGGTTTA+AGG | - | chr8.4:27573641-27573660 | None:intergenic | 40.0% |
| !! | GTTGCTACATGCTGTTGTTT+TGG | + | chr8.4:27571883-27571902 | MS.gene28549:CDS | 40.0% |
| !!! | ACAGTTATGGTTTTGGCCAA+TGG | + | chr8.4:27574703-27574722 | MS.gene28549:intron | 40.0% |
| !!! | TTCCACCTCGACTAGTTTTA+GGG | - | chr8.4:27573545-27573564 | None:intergenic | 40.0% |
| ACCAAGGTATGTGGAATCTG+AGG | + | chr8.4:27575096-27575115 | MS.gene28549:CDS | 45.0% | |
| ACCTCAGATTCCACATACCT+TGG | - | chr8.4:27575100-27575119 | None:intergenic | 45.0% | |
| ACTCCCTTGATGTCCATGTT+GGG | + | chr8.4:27573593-27573612 | MS.gene28549:CDS | 45.0% | |
| ACTCTATTACACACCTGCTG+AGG | - | chr8.4:27572001-27572020 | None:intergenic | 45.0% | |
| ACTGAGGTAGCTACATAAGC+AGG | - | chr8.4:27574459-27574478 | None:intergenic | 45.0% | |
| ATCCTTGGCCTGAAACTTGT+AGG | - | chr8.4:27572583-27572602 | None:intergenic | 45.0% | |
| ATCGAAATCCTTCGCAACAG+AGG | - | chr8.4:27572857-27572876 | None:intergenic | 45.0% | |
| ATCTAACAGCCAATGCTGCA+AGG | + | chr8.4:27574220-27574239 | MS.gene28549:CDS | 45.0% | |
| ATTGCCCAACATGGACATCA+AGG | - | chr8.4:27573600-27573619 | None:intergenic | 45.0% | |
| CAACTTCATAAAGCAGCTGG+AGG | + | chr8.4:27572636-27572655 | MS.gene28549:CDS | 45.0% | |
| CATTGGACAACCAAGGTATG+TGG | + | chr8.4:27575087-27575106 | MS.gene28549:CDS | 45.0% | |
| CTAAAACTAGTCGAGGTGGA+AGG | + | chr8.4:27573544-27573563 | MS.gene28549:CDS | 45.0% | |
| GGAGGACAAAAGCCTAATCT+AGG | - | chr8.4:27572775-27572794 | None:intergenic | 45.0% | |
| GTAATCAGCAAGCTTGAGAG+GGG | - | chr8.4:27574379-27574398 | None:intergenic | 45.0% | |
| GTCCAATGACACCAATATGG+TGG | - | chr8.4:27575075-27575094 | None:intergenic | 45.0% | |
| GTGAAATCTCCATCAGGGTA+TGG | - | chr8.4:27572711-27572730 | None:intergenic | 45.0% | |
| GTTCCTTATCCATACCCTGA+TGG | + | chr8.4:27572699-27572718 | MS.gene28549:CDS | 45.0% | |
| TACCCTAAAACTAGTCGAGG+TGG | + | chr8.4:27573540-27573559 | MS.gene28549:CDS | 45.0% | |
| TATTGGTAAGCAGGAGGACT+AGG | - | chr8.4:27573763-27573782 | None:intergenic | 45.0% | |
| TCCAACAACTAACGATGTGC+TGG | - | chr8.4:27572904-27572923 | None:intergenic | 45.0% | |
| TCTCCATCAGGGTATGGATA+AGG | - | chr8.4:27572705-27572724 | None:intergenic | 45.0% | |
| TCTCTAGTGCAAGCAGAAGA+TGG | + | chr8.4:27571920-27571939 | MS.gene28549:CDS | 45.0% | |
| TGGTATGATCCTTGTGGGTT+TGG | - | chr8.4:27574246-27574265 | None:intergenic | 45.0% | |
| TTGCCCAACATGGACATCAA+GGG | - | chr8.4:27573599-27573618 | None:intergenic | 45.0% | |
| TTGCTTTGTGGTAAAGCCAG+TGG | + | chr8.4:27575221-27575240 | MS.gene28549:CDS | 45.0% | |
| TTTCAGGCCAAGGATCAGAT+TGG | + | chr8.4:27572588-27572607 | MS.gene28549:CDS | 45.0% | |
| ! | GAATCTGAGGTCTGCAATCT+GGG | + | chr8.4:27575109-27575128 | MS.gene28549:CDS | 45.0% |
| ! | TCATGGCAAGATGGGGTATT+AGG | + | chr8.4:27572522-27572541 | MS.gene28549:CDS | 45.0% |
| !! | GACCACCATATTGGTGTCAT+TGG | + | chr8.4:27575070-27575089 | MS.gene28549:CDS | 45.0% |
| !! | GTTTGGAGGTATTGGACAGT+TGG | - | chr8.4:27572550-27572569 | None:intergenic | 45.0% |
| !! | TTGGTGTCATTGGACAACCA+AGG | + | chr8.4:27575080-27575099 | MS.gene28549:CDS | 45.0% |
| !!! | CTTCCACCTCGACTAGTTTT+AGG | - | chr8.4:27573546-27573565 | None:intergenic | 45.0% |
| ACTAAGTCTAGTTGAGGCCC+CGG | - | chr8.4:27572308-27572327 | None:intergenic | 50.0% | |
| ATCAGCACATCAACGGTCGT+TGG | - | chr8.4:27573016-27573035 | None:intergenic | 50.0% | |
| CACCTACAAGTTTCAGGCCA+AGG | + | chr8.4:27572578-27572597 | MS.gene28549:CDS | 50.0% | |
| CATAAAGCAGCTGGAGGGTT+TGG | + | chr8.4:27572642-27572661 | MS.gene28549:CDS | 50.0% | |
| CCATTGATGAGCAGACCATC+AGG | - | chr8.4:27573302-27573321 | None:intergenic | 50.0% | |
| CCTGATGGTCTGCTCATCAA+TGG | + | chr8.4:27573299-27573318 | MS.gene28549:CDS | 50.0% | |
| GACTCCCTTGATGTCCATGT+TGG | + | chr8.4:27573592-27573611 | MS.gene28549:CDS | 50.0% | |
| GCCAGCACATCGTTAGTTGT+TGG | + | chr8.4:27572900-27572919 | MS.gene28549:intron | 50.0% | |
| TAAGCAGGAGGACTAGGCAA+AGG | - | chr8.4:27573757-27573776 | None:intergenic | 50.0% | |
| TAGGCAAAGGACCAGAAGCA+GGG | - | chr8.4:27573744-27573763 | None:intergenic | 50.0% | |
| TCAGCACATCAACGGTCGTT+GGG | - | chr8.4:27573015-27573034 | None:intergenic | 50.0% | |
| ! | GGAATCTGAGGTCTGCAATC+TGG | + | chr8.4:27575108-27575127 | MS.gene28549:CDS | 50.0% |
| !! | AACTAACGATGTGCTGGCTG+CGG | - | chr8.4:27572898-27572917 | None:intergenic | 50.0% |
| !! | TGGGCAATCAGCTGCTGTTT+TGG | + | chr8.4:27573612-27573631 | MS.gene28549:CDS | 50.0% |
| AACTCTCACTCCCCTGCTTC+TGG | + | chr8.4:27573730-27573749 | MS.gene28549:CDS | 55.0% | |
| AGGCAAAGGACCAGAAGCAG+GGG | - | chr8.4:27573743-27573762 | None:intergenic | 55.0% | |
| AGTTACCTGTGCAGTGTGCC+TGG | - | chr8.4:27574772-27574791 | None:intergenic | 55.0% | |
| ATTTAGTCGATGCCCCGACC+AGG | + | chr8.4:27574751-27574770 | MS.gene28549:CDS | 55.0% | |
| CAGCAGCTGATTGCCCAACA+TGG | - | chr8.4:27573609-27573628 | None:intergenic | 55.0% | |
| CTAGGCAAAGGACCAGAAGC+AGG | - | chr8.4:27573745-27573764 | None:intergenic | 55.0% | |
| TCCACTTGGTACTCCTCAGC+AGG | + | chr8.4:27571985-27572004 | MS.gene28549:CDS | 55.0% | |
| TTCTCTTGGCTGGGGTCCAT+TGG | - | chr8.4:27574722-27574741 | None:intergenic | 55.0% | |
| !! | ACCTGCTGAGGAGTACCAAG+TGG | - | chr8.4:27571989-27572008 | None:intergenic | 55.0% |
| !! | ACTAACGATGTGCTGGCTGC+GGG | - | chr8.4:27572897-27572916 | None:intergenic | 55.0% |
| !! | TGGGTTTGGCCTTGCAGCAT+TGG | - | chr8.4:27574232-27574251 | None:intergenic | 55.0% |
| ACCTGTGCAGTGTGCCTGGT+CGG | - | chr8.4:27574768-27574787 | None:intergenic | 60.0% | |
| GCTGCAAGGCCAAACCCACA+AGG | + | chr8.4:27574234-27574253 | MS.gene28549:CDS | 60.0% | |
| CCTGTGCAGTGTGCCTGGTC+GGG | - | chr8.4:27574767-27574786 | None:intergenic | 65.0% | |
| CTGTGCAGTGTGCCTGGTCG+GGG | - | chr8.4:27574766-27574785 | None:intergenic | 65.0% | |
| CCCGACCAGGCACACTGCAC+AGG | + | chr8.4:27574764-27574783 | MS.gene28549:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 27571857 | 27575256 | 27571857 | ID=MS.gene28549 |
| chr8.4 | mRNA | 27571857 | 27575256 | 27571857 | ID=MS.gene28549.t1;Parent=MS.gene28549 |
| chr8.4 | exon | 27571857 | 27572006 | 27571857 | ID=MS.gene28549.t1.exon1;Parent=MS.gene28549.t1 |
| chr8.4 | CDS | 27571857 | 27572006 | 27571857 | ID=cds.MS.gene28549.t1;Parent=MS.gene28549.t1 |
| chr8.4 | exon | 27572281 | 27572390 | 27572281 | ID=MS.gene28549.t1.exon2;Parent=MS.gene28549.t1 |
| chr8.4 | CDS | 27572281 | 27572390 | 27572281 | ID=cds.MS.gene28549.t1;Parent=MS.gene28549.t1 |
| chr8.4 | exon | 27572497 | 27572767 | 27572497 | ID=MS.gene28549.t1.exon3;Parent=MS.gene28549.t1 |
| chr8.4 | CDS | 27572497 | 27572767 | 27572497 | ID=cds.MS.gene28549.t1;Parent=MS.gene28549.t1 |
| chr8.4 | exon | 27573257 | 27573353 | 27573257 | ID=MS.gene28549.t1.exon4;Parent=MS.gene28549.t1 |
| chr8.4 | CDS | 27573257 | 27573353 | 27573257 | ID=cds.MS.gene28549.t1;Parent=MS.gene28549.t1 |
| chr8.4 | exon | 27573470 | 27573815 | 27573470 | ID=MS.gene28549.t1.exon5;Parent=MS.gene28549.t1 |
| chr8.4 | CDS | 27573470 | 27573815 | 27573470 | ID=cds.MS.gene28549.t1;Parent=MS.gene28549.t1 |
| chr8.4 | exon | 27574215 | 27574580 | 27574215 | ID=MS.gene28549.t1.exon6;Parent=MS.gene28549.t1 |
| chr8.4 | CDS | 27574215 | 27574580 | 27574215 | ID=cds.MS.gene28549.t1;Parent=MS.gene28549.t1 |
| chr8.4 | exon | 27574707 | 27574785 | 27574707 | ID=MS.gene28549.t1.exon7;Parent=MS.gene28549.t1 |
| chr8.4 | CDS | 27574707 | 27574785 | 27574707 | ID=cds.MS.gene28549.t1;Parent=MS.gene28549.t1 |
| chr8.4 | exon | 27575053 | 27575256 | 27575053 | ID=MS.gene28549.t1.exon8;Parent=MS.gene28549.t1 |
| chr8.4 | CDS | 27575053 | 27575256 | 27575053 | ID=cds.MS.gene28549.t1;Parent=MS.gene28549.t1 |
| Gene Sequence |
| Protein sequence |
