Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28593.t1 | RHN42260.1 | 96.1 | 203 | 8 | 0 | 4 | 206 | 3 | 205 | 6.10E-108 | 400.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28593.t1 | Q8H0F2 | 34.9 | 175 | 112 | 1 | 11 | 183 | 4 | 178 | 3.9e-23 | 109.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28593.t1 | A0A396GMJ5 | 96.1 | 203 | 8 | 0 | 4 | 206 | 3 | 205 | 4.4e-108 | 400.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050338 | MS.gene28593 | 0.801881 | 7.30E-49 | -1.69E-46 |
| MS.gene051439 | MS.gene28593 | 0.843281 | 1.54E-58 | -1.69E-46 |
| MS.gene052129 | MS.gene28593 | 0.816142 | 6.44E-52 | -1.69E-46 |
| MS.gene052606 | MS.gene28593 | 0.809299 | 2.03E-50 | -1.69E-46 |
| MS.gene056590 | MS.gene28593 | 0.806309 | 8.76E-50 | -1.69E-46 |
| MS.gene056591 | MS.gene28593 | 0.8068 | 6.90E-50 | -1.69E-46 |
| MS.gene056694 | MS.gene28593 | 0.839991 | 1.14E-57 | -1.69E-46 |
| MS.gene056697 | MS.gene28593 | 0.845608 | 3.65E-59 | -1.69E-46 |
| MS.gene056856 | MS.gene28593 | 0.801341 | 9.42E-49 | -1.69E-46 |
| MS.gene057717 | MS.gene28593 | 0.80009 | 1.70E-48 | -1.69E-46 |
| MS.gene05926 | MS.gene28593 | 0.816308 | 5.91E-52 | -1.69E-46 |
| MS.gene060087 | MS.gene28593 | 0.839069 | 1.98E-57 | -1.69E-46 |
| MS.gene061044 | MS.gene28593 | 0.830595 | 2.69E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28593.t1 | MTR_8g032950 | 89.320 | 206 | 22 | 0 | 1 | 206 | 1 | 206 | 3.40e-125 | 363 |
| MS.gene28593.t1 | MTR_4g117960 | 69.608 | 204 | 61 | 1 | 4 | 206 | 3 | 206 | 3.53e-94 | 283 |
| MS.gene28593.t1 | MTR_2g034990 | 62.621 | 206 | 74 | 2 | 4 | 206 | 3 | 208 | 1.72e-81 | 251 |
| MS.gene28593.t1 | MTR_4g117980 | 60.396 | 202 | 77 | 1 | 4 | 202 | 3 | 204 | 1.58e-78 | 243 |
| MS.gene28593.t1 | MTR_2g035020 | 61.165 | 206 | 77 | 1 | 4 | 206 | 3 | 208 | 9.76e-78 | 241 |
| MS.gene28593.t1 | MTR_6g035265 | 60.680 | 206 | 75 | 3 | 3 | 208 | 2 | 201 | 7.33e-75 | 234 |
| MS.gene28593.t1 | MTR_7g012120 | 58.738 | 206 | 84 | 1 | 4 | 208 | 8 | 213 | 3.43e-74 | 232 |
| MS.gene28593.t1 | MTR_6g035185 | 58.654 | 208 | 83 | 1 | 4 | 208 | 3 | 210 | 1.70e-73 | 231 |
| MS.gene28593.t1 | MTR_5g029800 | 60.680 | 206 | 74 | 2 | 4 | 206 | 3 | 204 | 4.25e-70 | 221 |
| MS.gene28593.t1 | MTR_5g067170 | 58.173 | 208 | 80 | 3 | 3 | 206 | 2 | 206 | 9.20e-67 | 213 |
| MS.gene28593.t1 | MTR_0536s0020 | 48.780 | 205 | 94 | 3 | 6 | 208 | 12 | 207 | 4.30e-57 | 188 |
| MS.gene28593.t1 | MTR_4g117890 | 49.048 | 210 | 96 | 3 | 1 | 208 | 2 | 202 | 6.26e-57 | 187 |
| MS.gene28593.t1 | MTR_0536s0010 | 48.718 | 195 | 91 | 2 | 7 | 201 | 16 | 201 | 2.75e-52 | 175 |
| MS.gene28593.t1 | MTR_4g118000 | 48.980 | 196 | 90 | 2 | 8 | 203 | 8 | 193 | 4.05e-52 | 174 |
| MS.gene28593.t1 | MTR_4g117950 | 46.040 | 202 | 101 | 2 | 7 | 208 | 1 | 194 | 3.89e-48 | 164 |
| MS.gene28593.t1 | MTR_4g117970 | 61.538 | 130 | 49 | 1 | 79 | 208 | 53 | 181 | 1.30e-44 | 154 |
| MS.gene28593.t1 | MTR_0536s0030 | 47.647 | 170 | 78 | 3 | 39 | 206 | 7 | 167 | 1.54e-42 | 147 |
| MS.gene28593.t1 | MTR_2g035050 | 66.372 | 113 | 38 | 0 | 4 | 116 | 3 | 115 | 5.85e-41 | 136 |
| MS.gene28593.t1 | MTR_4g031800 | 36.041 | 197 | 122 | 2 | 9 | 203 | 6 | 200 | 1.10e-33 | 125 |
| MS.gene28593.t1 | MTR_7g070800 | 41.899 | 179 | 102 | 1 | 7 | 183 | 1 | 179 | 1.85e-33 | 125 |
| MS.gene28593.t1 | MTR_7g070780 | 42.045 | 176 | 100 | 1 | 10 | 183 | 9 | 184 | 3.74e-31 | 119 |
| MS.gene28593.t1 | MTR_7g070860 | 40.556 | 180 | 99 | 2 | 9 | 183 | 4 | 180 | 5.85e-31 | 118 |
| MS.gene28593.t1 | MTR_5g016660 | 38.286 | 175 | 106 | 1 | 11 | 183 | 9 | 183 | 4.86e-30 | 115 |
| MS.gene28593.t1 | MTR_7g070740 | 41.341 | 179 | 95 | 4 | 12 | 183 | 9 | 184 | 5.05e-30 | 116 |
| MS.gene28593.t1 | MTR_7g070930 | 37.895 | 190 | 111 | 3 | 12 | 197 | 12 | 198 | 6.89e-30 | 115 |
| MS.gene28593.t1 | MTR_7g055710 | 37.714 | 175 | 107 | 1 | 11 | 183 | 10 | 184 | 8.58e-29 | 112 |
| MS.gene28593.t1 | MTR_7g070660 | 39.326 | 178 | 100 | 2 | 11 | 183 | 10 | 184 | 1.76e-28 | 111 |
| MS.gene28593.t1 | MTR_4g485630 | 34.595 | 185 | 115 | 3 | 12 | 193 | 7 | 188 | 2.18e-27 | 108 |
| MS.gene28593.t1 | MTR_7g071040 | 37.368 | 190 | 112 | 3 | 1 | 183 | 1 | 190 | 2.28e-27 | 108 |
| MS.gene28593.t1 | MTR_7g070910 | 36.364 | 176 | 108 | 2 | 12 | 183 | 9 | 184 | 3.40e-27 | 108 |
| MS.gene28593.t1 | MTR_7g070610 | 38.636 | 176 | 104 | 2 | 12 | 183 | 11 | 186 | 1.13e-26 | 106 |
| MS.gene28593.t1 | MTR_7g071050 | 39.106 | 179 | 94 | 4 | 12 | 183 | 11 | 181 | 2.38e-26 | 105 |
| MS.gene28593.t1 | MTR_6g035295 | 41.667 | 144 | 81 | 2 | 11 | 151 | 11 | 154 | 3.37e-26 | 105 |
| MS.gene28593.t1 | MTR_7g070940 | 37.017 | 181 | 112 | 1 | 9 | 187 | 6 | 186 | 6.01e-26 | 104 |
| MS.gene28593.t1 | MTR_4g108250 | 37.989 | 179 | 104 | 3 | 12 | 183 | 9 | 187 | 6.23e-26 | 104 |
| MS.gene28593.t1 | MTR_7g070810 | 34.211 | 190 | 119 | 2 | 9 | 194 | 6 | 193 | 6.64e-26 | 104 |
| MS.gene28593.t1 | MTR_5g039900 | 36.517 | 178 | 105 | 2 | 11 | 183 | 12 | 186 | 3.80e-25 | 102 |
| MS.gene28593.t1 | MTR_1g040310 | 36.413 | 184 | 112 | 3 | 4 | 183 | 5 | 187 | 1.09e-22 | 95.5 |
| MS.gene28593.t1 | MTR_8g066610 | 32.386 | 176 | 117 | 1 | 10 | 183 | 7 | 182 | 2.02e-22 | 94.7 |
| MS.gene28593.t1 | MTR_2g035040 | 53.763 | 93 | 36 | 2 | 119 | 206 | 23 | 113 | 3.03e-22 | 93.6 |
| MS.gene28593.t1 | MTR_7g070870 | 33.158 | 190 | 118 | 3 | 9 | 194 | 16 | 200 | 4.23e-22 | 94.0 |
| MS.gene28593.t1 | MTR_5g045970 | 32.870 | 216 | 117 | 8 | 13 | 209 | 15 | 221 | 1.49e-21 | 92.4 |
| MS.gene28593.t1 | MTR_7g470590 | 42.609 | 115 | 63 | 2 | 11 | 122 | 10 | 124 | 6.27e-21 | 84.7 |
| MS.gene28593.t1 | MTR_7g070570 | 42.609 | 115 | 63 | 2 | 11 | 122 | 10 | 124 | 6.27e-21 | 84.7 |
| MS.gene28593.t1 | MTR_7g039570 | 31.638 | 177 | 112 | 3 | 11 | 181 | 13 | 186 | 2.93e-20 | 86.3 |
| MS.gene28593.t1 | MTR_4g485620 | 31.481 | 162 | 109 | 1 | 24 | 183 | 1 | 162 | 2.99e-20 | 88.6 |
| MS.gene28593.t1 | MTR_7g117405 | 31.792 | 173 | 114 | 2 | 15 | 183 | 15 | 187 | 5.50e-20 | 87.8 |
| MS.gene28593.t1 | MTR_5g040030 | 31.844 | 179 | 113 | 3 | 9 | 181 | 11 | 186 | 6.84e-20 | 87.4 |
| MS.gene28593.t1 | MTR_7g102450 | 31.472 | 197 | 115 | 4 | 15 | 203 | 14 | 198 | 3.98e-19 | 85.5 |
| MS.gene28593.t1 | MTR_7g102550 | 28.000 | 175 | 122 | 2 | 15 | 185 | 12 | 186 | 6.62e-19 | 84.7 |
| MS.gene28593.t1 | MTR_4g485590 | 38.168 | 131 | 79 | 1 | 16 | 144 | 13 | 143 | 2.75e-18 | 82.8 |
| MS.gene28593.t1 | MTR_7g102560 | 32.044 | 181 | 110 | 6 | 12 | 183 | 7 | 183 | 4.37e-17 | 79.3 |
| MS.gene28593.t1 | MTR_8g044140 | 33.557 | 149 | 96 | 2 | 37 | 183 | 2 | 149 | 7.90e-17 | 78.6 |
| MS.gene28593.t1 | MTR_1g062380 | 33.526 | 173 | 108 | 4 | 16 | 183 | 20 | 190 | 1.04e-16 | 78.6 |
| MS.gene28593.t1 | MTR_5g045960 | 28.324 | 173 | 120 | 2 | 9 | 177 | 6 | 178 | 2.73e-16 | 77.0 |
| MS.gene28593.t1 | MTR_4g485640 | 31.609 | 174 | 100 | 5 | 22 | 189 | 219 | 379 | 1.11e-14 | 72.8 |
| MS.gene28593.t1 | MTR_7g102460 | 29.444 | 180 | 119 | 5 | 12 | 183 | 7 | 186 | 1.34e-14 | 72.4 |
| MS.gene28593.t1 | MTR_4g024020 | 30.769 | 208 | 128 | 7 | 12 | 203 | 7 | 214 | 1.84e-14 | 72.0 |
| MS.gene28593.t1 | MTR_7g102490 | 28.333 | 180 | 121 | 5 | 12 | 183 | 7 | 186 | 8.37e-13 | 67.0 |
| MS.gene28593.t1 | MTR_7g067330 | 29.310 | 174 | 112 | 6 | 10 | 178 | 5 | 172 | 5.79e-12 | 64.3 |
| MS.gene28593.t1 | MTR_2g008225 | 30.216 | 139 | 90 | 5 | 9 | 145 | 12 | 145 | 7.16e-12 | 64.3 |
| MS.gene28593.t1 | MTR_8g068340 | 31.944 | 144 | 89 | 5 | 8 | 148 | 8 | 145 | 7.54e-12 | 64.3 |
| MS.gene28593.t1 | MTR_7g102520 | 25.980 | 204 | 134 | 5 | 16 | 206 | 16 | 215 | 2.29e-11 | 62.8 |
| MS.gene28593.t1 | MTR_4g123553 | 24.870 | 193 | 118 | 5 | 2 | 193 | 5 | 171 | 4.39e-11 | 62.0 |
| MS.gene28593.t1 | MTR_8g068330 | 31.206 | 141 | 88 | 5 | 8 | 145 | 4 | 138 | 4.47e-11 | 62.0 |
| MS.gene28593.t1 | MTR_2g008220 | 29.496 | 139 | 91 | 5 | 9 | 145 | 11 | 144 | 9.92e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28593.t1 | AT2G36790 | 33.149 | 181 | 116 | 3 | 10 | 185 | 11 | 191 | 1.62e-23 | 97.8 |
| MS.gene28593.t1 | AT2G36800 | 33.152 | 184 | 118 | 3 | 10 | 188 | 10 | 193 | 1.07e-22 | 95.5 |
| MS.gene28593.t1 | AT2G36750 | 34.375 | 192 | 120 | 4 | 10 | 195 | 8 | 199 | 2.30e-22 | 94.7 |
| MS.gene28593.t1 | AT2G36770 | 31.553 | 206 | 129 | 4 | 10 | 203 | 12 | 217 | 1.49e-21 | 92.4 |
| MS.gene28593.t1 | AT2G36780 | 32.386 | 176 | 114 | 3 | 15 | 185 | 17 | 192 | 2.37e-21 | 91.7 |
| MS.gene28593.t1 | AT2G15490 | 28.723 | 188 | 122 | 3 | 12 | 187 | 5 | 192 | 8.74e-21 | 87.8 |
| MS.gene28593.t1 | AT4G34131 | 30.108 | 186 | 120 | 4 | 9 | 184 | 7 | 192 | 1.78e-20 | 89.4 |
| MS.gene28593.t1 | AT2G15480 | 26.761 | 213 | 138 | 5 | 12 | 208 | 8 | 218 | 2.61e-20 | 89.0 |
| MS.gene28593.t1 | AT2G15480 | 28.141 | 199 | 129 | 4 | 12 | 198 | 8 | 204 | 2.65e-20 | 89.0 |
| MS.gene28593.t1 | AT2G36760 | 30.939 | 181 | 120 | 3 | 10 | 185 | 12 | 192 | 4.49e-20 | 88.2 |
| MS.gene28593.t1 | AT2G15490 | 29.189 | 185 | 119 | 3 | 12 | 184 | 5 | 189 | 1.55e-19 | 86.7 |
| MS.gene28593.t1 | AT2G15490 | 29.189 | 185 | 119 | 3 | 12 | 184 | 5 | 189 | 1.77e-19 | 86.3 |
| MS.gene28593.t1 | AT4G34138 | 32.804 | 189 | 104 | 8 | 12 | 183 | 9 | 191 | 1.82e-19 | 86.3 |
| MS.gene28593.t1 | AT3G53160 | 33.005 | 203 | 129 | 4 | 10 | 206 | 6 | 207 | 3.29e-18 | 82.8 |
| MS.gene28593.t1 | AT3G53150 | 27.895 | 190 | 129 | 5 | 1 | 183 | 10 | 198 | 2.08e-17 | 80.5 |
| MS.gene28593.t1 | AT4G34135 | 27.419 | 186 | 125 | 4 | 9 | 184 | 8 | 193 | 7.04e-17 | 78.2 |
| MS.gene28593.t1 | AT4G34135 | 27.419 | 186 | 125 | 4 | 9 | 184 | 8 | 193 | 1.47e-16 | 78.2 |
Find 75 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATATGAACGGTTTATTCTT+AGG | 0.116264 | 8.4:+26829099 | None:intergenic |
| GTGATTGAATGAGGAAAATT+TGG | 0.178357 | 8.4:+26829041 | None:intergenic |
| ACCTGGTCATATGATTCCTT+TGG | 0.293652 | 8.4:-26829510 | MS.gene28593:CDS |
| GGTGGAGATATGAGGCTTAT+TGG | 0.302805 | 8.4:+26829169 | None:intergenic |
| CTTCTCCACGAATTCTCTAA+TGG | 0.327449 | 8.4:+26829247 | None:intergenic |
| CGTCAGGAAGGTCGACTTGC+TGG | 0.330668 | 8.4:+26829348 | None:intergenic |
| CATATCTTGCCCATGGTGGC+AGG | 0.345685 | 8.4:+26829296 | None:intergenic |
| ATATGAACGGTTTATTCTTA+GGG | 0.366103 | 8.4:+26829100 | None:intergenic |
| TTCTCCACGAATTCTCTAAT+GGG | 0.393354 | 8.4:+26829248 | None:intergenic |
| GGTGGCAGGGTCAGTGGTGG+AGG | 0.398789 | 8.4:+26829310 | None:intergenic |
| TCAAATGCGATTAATTGCTT+TGG | 0.400042 | 8.4:+26829002 | None:intergenic |
| CCTGGTCATATGATTCCTTT+GGG | 0.419398 | 8.4:-26829509 | MS.gene28593:CDS |
| AAAGCAATTAATCGCATTTG+AGG | 0.425080 | 8.4:-26829000 | MS.gene28593:CDS |
| TACTGTAAAGAGGGAGAATC+CGG | 0.437988 | 8.4:+26829136 | None:intergenic |
| ATCGATGGAGGAGAGAGATT+TGG | 0.438186 | 8.4:+26829409 | None:intergenic |
| CTTTGGTGGTGTTGAGCAAA+AGG | 0.445166 | 8.4:+26829019 | None:intergenic |
| GACAATGATTCAACGCCGTC+AGG | 0.450229 | 8.4:+26829332 | None:intergenic |
| ATATGACCAGGTGATAGAAA+TGG | 0.461084 | 8.4:+26829521 | None:intergenic |
| ATCTCCACCATTGCCTTCAC+CGG | 0.463543 | 8.4:-26829155 | MS.gene28593:CDS |
| GCCCATGGTGGCAGGGTCAG+TGG | 0.465697 | 8.4:+26829304 | None:intergenic |
| TTATTCTTAGGGATTCTATG+AGG | 0.473109 | 8.4:+26829111 | None:intergenic |
| AATGCGATTAATTGCTTTGG+TGG | 0.480303 | 8.4:+26829005 | None:intergenic |
| GAAATGAGCATTGGAGGGAG+TGG | 0.482897 | 8.4:+26829436 | None:intergenic |
| ACCACTGACCCTGCCACCAT+GGG | 0.486447 | 8.4:-26829305 | MS.gene28593:CDS |
| TTTGGTAAAGAAATGAGCAT+TGG | 0.488916 | 8.4:+26829427 | None:intergenic |
| CATGGTGGCAGGGTCAGTGG+TGG | 0.489138 | 8.4:+26829307 | None:intergenic |
| GTCAGGAAGGTCGACTTGCT+GGG | 0.495955 | 8.4:+26829349 | None:intergenic |
| CAGTCGGCAATGATGTAGTC+AGG | 0.498245 | 8.4:+26829218 | None:intergenic |
| CACCACTGACCCTGCCACCA+TGG | 0.503659 | 8.4:-26829306 | MS.gene28593:CDS |
| TTGCCGACTGTGTATACCCT+TGG | 0.505815 | 8.4:-26829205 | MS.gene28593:CDS |
| ACCTTTGCATATCTTGCCCA+TGG | 0.508266 | 8.4:+26829289 | None:intergenic |
| GGTAAAGAAATGAGCATTGG+AGG | 0.510063 | 8.4:+26829430 | None:intergenic |
| TGATCGTGACTTGTTGGCCA+TGG | 0.514668 | 8.4:+26829462 | None:intergenic |
| GGAAGGTCGACTTGCTGGGA+GGG | 0.515166 | 8.4:+26829353 | None:intergenic |
| TGAACCCATTAGAGAATTCG+TGG | 0.519777 | 8.4:-26829252 | MS.gene28593:CDS |
| GGAAGCATGTGAAGTTTCAA+TGG | 0.522455 | 8.4:+26829542 | None:intergenic |
| TCAGCAATGGAAAATGGGGT+TGG | 0.526852 | 8.4:-26829575 | None:intergenic |
| AAGGCAATGGTGGAGATATG+AGG | 0.540237 | 8.4:+26829161 | None:intergenic |
| AAAGATCAATTATTTGCCAA+TGG | 0.546207 | 8.4:+26827301 | None:intergenic |
| AGGGAAAGTCGATGGTGTGA+AGG | 0.548264 | 8.4:+26829372 | None:intergenic |
| TGGCCAAGTCATTGATCCAA+GGG | 0.550045 | 8.4:+26829189 | None:intergenic |
| ATGATTCAACGCCGTCAGGA+AGG | 0.555418 | 8.4:+26829336 | None:intergenic |
| AATTCTTGTCAAAATATGAA+CGG | 0.556451 | 8.4:+26829087 | None:intergenic |
| ATGCTTCCATTTCTATCACC+TGG | 0.556882 | 8.4:-26829527 | MS.gene28593:CDS |
| GCGGAGGAACAACGGATCGA+TGG | 0.559495 | 8.4:+26829394 | None:intergenic |
| CCCAAAGGAATCATATGACC+AGG | 0.562986 | 8.4:+26829509 | None:intergenic |
| GCAGCTCTGTTTGCATCCCA+TGG | 0.566637 | 8.4:-26829479 | MS.gene28593:CDS |
| AGTCGATGGTGTGAAGGCGG+AGG | 0.572713 | 8.4:+26829378 | None:intergenic |
| CATTAGAGAATTCGTGGAGA+AGG | 0.573122 | 8.4:-26829246 | MS.gene28593:CDS |
| TTTATCAGCAATGGAAAATG+GGG | 0.573687 | 8.4:-26829579 | None:intergenic |
| TTGGCCAAGTCATTGATCCA+AGG | 0.574098 | 8.4:+26829188 | None:intergenic |
| TATTCTTAGGGATTCTATGA+GGG | 0.574610 | 8.4:+26829112 | None:intergenic |
| CTATGAGGGATACTGTAAAG+AGG | 0.575800 | 8.4:+26829126 | None:intergenic |
| TGGTGATGATCGTGACTTGT+TGG | 0.578665 | 8.4:+26829456 | None:intergenic |
| GATCGTGACTTGTTGGCCAT+GGG | 0.580057 | 8.4:+26829463 | None:intergenic |
| ATATCTTGCCCATGGTGGCA+GGG | 0.580533 | 8.4:+26829297 | None:intergenic |
| ATACCCTTGGATCAATGACT+TGG | 0.581491 | 8.4:-26829192 | MS.gene28593:CDS |
| TATGAGGGATACTGTAAAGA+GGG | 0.584504 | 8.4:+26829127 | None:intergenic |
| GGAGAATCCGGTGAAGGCAA+TGG | 0.587503 | 8.4:+26829148 | None:intergenic |
| GAGCAAAAGGTGATTGAATG+AGG | 0.599051 | 8.4:+26829032 | None:intergenic |
| GTAAAGAAATGAGCATTGGA+GGG | 0.605073 | 8.4:+26829431 | None:intergenic |
| GAATCCGGTGAAGGCAATGG+TGG | 0.605639 | 8.4:+26829151 | None:intergenic |
| TTTGCATATCTTGCCCATGG+TGG | 0.606223 | 8.4:+26829292 | None:intergenic |
| GAGGAACAACGGATCGATGG+AGG | 0.610734 | 8.4:+26829397 | None:intergenic |
| GTGTGAAGGCGGAGGAACAA+CGG | 0.615912 | 8.4:+26829386 | None:intergenic |
| TTGCTGGGAGGGAAAGTCGA+TGG | 0.621614 | 8.4:+26829364 | None:intergenic |
| ACCATGGGCAAGATATGCAA+AGG | 0.627998 | 8.4:-26829290 | MS.gene28593:CDS |
| GAAAGTCGATGGTGTGAAGG+CGG | 0.633236 | 8.4:+26829375 | None:intergenic |
| GATCCAAGGGTATACACAGT+CGG | 0.633418 | 8.4:+26829202 | None:intergenic |
| AGGAGATGTATGTATGCCAT+TGG | 0.640818 | 8.4:-26827317 | MS.gene28593:CDS |
| AAAGAGGGAGAATCCGGTGA+AGG | 0.644440 | 8.4:+26829142 | None:intergenic |
| CAGCAAGTCGACCTTCCTGA+CGG | 0.661062 | 8.4:-26829347 | MS.gene28593:CDS |
| AAAATGGGGTTGGAGTTGAA+CGG | 0.663898 | 8.4:-26829565 | MS.gene28593:CDS |
| AGAGCTGCTATGTCACCCAA+AGG | 0.671212 | 8.4:+26829494 | None:intergenic |
| AGGAAGGTCGACTTGCTGGG+AGG | 0.671440 | 8.4:+26829352 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTTAGTACAATATGTAT+GGG | - | chr8.4:26828791-26828810 | MS.gene28593:intron | 15.0% |
| !! | TTAATTTAGTACAATATGTA+TGG | - | chr8.4:26828790-26828809 | MS.gene28593:intron | 15.0% |
| !!! | AGAAACATTTTAAATAAGAA+GGG | - | chr8.4:26828311-26828330 | MS.gene28593:intron | 15.0% |
| !!! | TCATTTTTCATAAAAAATAC+TGG | - | chr8.4:26829507-26829526 | MS.gene28593:CDS | 15.0% |
| !! | AATTCTTGTCAAAATATGAA+CGG | + | chr8.4:26827791-26827810 | None:intergenic | 20.0% |
| !! | TTGAGAACTTATAAAAAATG+AGG | - | chr8.4:26829305-26829324 | MS.gene28593:CDS | 20.0% |
| !! | TTTAGTGTTTAGATTTCAAA+TGG | + | chr8.4:26829191-26829210 | None:intergenic | 20.0% |
| !!! | GAGAAACATTTTAAATAAGA+AGG | - | chr8.4:26828310-26828329 | MS.gene28593:intron | 20.0% |
| !!! | TAGTATACATAGAAGTATAA+AGG | - | chr8.4:26829110-26829129 | MS.gene28593:CDS | 20.0% |
| !!! | TGATTATTGGTTAATTATGA+AGG | - | chr8.4:26829538-26829557 | MS.gene28593:CDS | 20.0% |
| !!! | TGATTTTTGATGAATTCATA+AGG | - | chr8.4:26829276-26829295 | MS.gene28593:CDS | 20.0% |
| ! | AATATGAACGGTTTATTCTT+AGG | + | chr8.4:26827779-26827798 | None:intergenic | 25.0% |
| ! | AATCTAGGTCAAATAGATTA+CGG | + | chr8.4:26829088-26829107 | None:intergenic | 25.0% |
| ! | AGAGTATATTGAATGAAACT+CGG | + | chr8.4:26829157-26829176 | None:intergenic | 25.0% |
| ! | ATATGAACGGTTTATTCTTA+GGG | + | chr8.4:26827778-26827797 | None:intergenic | 25.0% |
| ! | CTATTCATCAATCAACAATT+TGG | - | chr8.4:26828856-26828875 | MS.gene28593:intron | 25.0% |
| ! | TCTATGTATACTAAGAATCT+AGG | + | chr8.4:26829103-26829122 | None:intergenic | 25.0% |
| ! | TGAATTATTCAAGTAGTTTG+TGG | + | chr8.4:26828763-26828782 | None:intergenic | 25.0% |
| !! | CAGTGTTATACATATGTTTT+GGG | - | chr8.4:26828132-26828151 | MS.gene28593:intron | 25.0% |
| !! | TCAGTGTTATACATATGTTT+TGG | - | chr8.4:26828131-26828150 | MS.gene28593:intron | 25.0% |
| !!! | AAGAAGGGTTTTATCATTAA+GGG | - | chr8.4:26828326-26828345 | MS.gene28593:intron | 25.0% |
| !!! | TAAGAAGGGTTTTATCATTA+AGG | - | chr8.4:26828325-26828344 | MS.gene28593:intron | 25.0% |
| !!! | TTTTCAAGAAAAAGACAAAG+TGG | - | chr8.4:26828559-26828578 | MS.gene28593:intron | 25.0% |
| AAAAACTCAAGCACTACATT+TGG | + | chr8.4:26828975-26828994 | None:intergenic | 30.0% | |
| AAACACTATGAGAAAACCAT+GGG | - | chr8.4:26827978-26827997 | MS.gene28593:intron | 30.0% | |
| AAAGCAATTAATCGCATTTG+AGG | - | chr8.4:26827875-26827894 | MS.gene28593:intron | 30.0% | |
| AATAGAATATCAGTCAGGAA+AGG | + | chr8.4:26828841-26828860 | None:intergenic | 30.0% | |
| ACATTAATGCTGCTACTATA+CGG | - | chr8.4:26829210-26829229 | MS.gene28593:CDS | 30.0% | |
| ATTCAGGTAACGAATTTGTA+TGG | - | chr8.4:26828210-26828229 | MS.gene28593:intron | 30.0% | |
| GCTGATATATTGTTAGTACA+TGG | - | chr8.4:26829026-26829045 | MS.gene28593:CDS | 30.0% | |
| GTCGTCTAATAACAATTTGT+TGG | - | chr8.4:26828706-26828725 | MS.gene28593:intron | 30.0% | |
| GTGATTGAATGAGGAAAATT+TGG | + | chr8.4:26827837-26827856 | None:intergenic | 30.0% | |
| TAGCCACTTAAAATTGTTTC+TGG | - | chr8.4:26829379-26829398 | MS.gene28593:CDS | 30.0% | |
| TATTCTTAGGGATTCTATGA+GGG | + | chr8.4:26827766-26827785 | None:intergenic | 30.0% | |
| TCAAATGCGATTAATTGCTT+TGG | + | chr8.4:26827876-26827895 | None:intergenic | 30.0% | |
| TGATGAATAGAATATCAGTC+AGG | + | chr8.4:26828846-26828865 | None:intergenic | 30.0% | |
| TTATTCTTAGGGATTCTATG+AGG | + | chr8.4:26827767-26827786 | None:intergenic | 30.0% | |
| TTCAGGTAACGAATTTGTAT+GGG | - | chr8.4:26828211-26828230 | MS.gene28593:intron | 30.0% | |
| TTTGGTAAAGAAATGAGCAT+TGG | + | chr8.4:26827451-26827470 | None:intergenic | 30.0% | |
| ! | ATAGTATTGAAAAAGCTGTG+AGG | - | chr8.4:26828591-26828610 | MS.gene28593:intron | 30.0% |
| !! | AACAATTTGTTGGCTTTGAT+TGG | - | chr8.4:26828716-26828735 | MS.gene28593:intron | 30.0% |
| !! | AGAAGGGTTTTATCATTAAG+GGG | - | chr8.4:26828327-26828346 | MS.gene28593:intron | 30.0% |
| AAAGAAAAGTGGTTGCCTAA+AGG | - | chr8.4:26828278-26828297 | MS.gene28593:intron | 35.0% | |
| AAAGCCTAAATACATGGACT+CGG | - | chr8.4:26829451-26829470 | MS.gene28593:CDS | 35.0% | |
| AACAACTTTGCTGAACTTGA+TGG | - | chr8.4:26827942-26827961 | MS.gene28593:intron | 35.0% | |
| AAGGAGAGAAATCTCTTACA+AGG | + | chr8.4:26828822-26828841 | None:intergenic | 35.0% | |
| AATGCGATTAATTGCTTTGG+TGG | + | chr8.4:26827873-26827892 | None:intergenic | 35.0% | |
| ACAAGTCTCATCTAATGACA+TGG | + | chr8.4:26829060-26829079 | None:intergenic | 35.0% | |
| ACTGGTGAATGAGTGATTAT+TGG | - | chr8.4:26829525-26829544 | MS.gene28593:CDS | 35.0% | |
| AGGAGAGAAATCTCTTACAA+GGG | + | chr8.4:26828821-26828840 | None:intergenic | 35.0% | |
| ATATGACCAGGTGATAGAAA+TGG | + | chr8.4:26827357-26827376 | None:intergenic | 35.0% | |
| CAAACACTATGAGAAAACCA+TGG | - | chr8.4:26827977-26827996 | MS.gene28593:intron | 35.0% | |
| CACTTGAAAGCCTAAATACA+TGG | - | chr8.4:26829445-26829464 | MS.gene28593:CDS | 35.0% | |
| GCTTAAAATCATTGCTTGTG+GGG | + | chr8.4:26828357-26828376 | None:intergenic | 35.0% | |
| GGCTTAAAATCATTGCTTGT+GGG | + | chr8.4:26828358-26828377 | None:intergenic | 35.0% | |
| TATGAGGGATACTGTAAAGA+GGG | + | chr8.4:26827751-26827770 | None:intergenic | 35.0% | |
| TGGCTTAAAATCATTGCTTG+TGG | + | chr8.4:26828359-26828378 | None:intergenic | 35.0% | |
| TTCTCCACGAATTCTCTAAT+GGG | + | chr8.4:26827630-26827649 | None:intergenic | 35.0% | |
| TTTCTCTCTTCGAATCCTTT+AGG | + | chr8.4:26828296-26828315 | None:intergenic | 35.0% | |
| !! | CACTTAAAATTGTTTCTGGC+CGG | - | chr8.4:26829383-26829402 | MS.gene28593:CDS | 35.0% |
| !! | CATTTGGTTTGAGATTGAGA+TGG | + | chr8.4:26828959-26828978 | None:intergenic | 35.0% |
| !! | GTAAAGAAATGAGCATTGGA+GGG | + | chr8.4:26827447-26827466 | None:intergenic | 35.0% |
| !! | TTTTGAAGAGAAATCCGTGA+GGG | - | chr8.4:26828046-26828065 | MS.gene28593:intron | 35.0% |
| AAAAGCTGTGAGGAGATTGA+TGG | - | chr8.4:26828601-26828620 | MS.gene28593:intron | 40.0% | |
| AAAATGGGGTTGGAGTTGAA+CGG | - | chr8.4:26827310-26827329 | MS.gene28593:CDS | 40.0% | |
| AAGCCTAAATACATGGACTC+GGG | - | chr8.4:26829452-26829471 | MS.gene28593:CDS | 40.0% | |
| AAGCTGATAACTGTTGTGCA+AGG | - | chr8.4:26828494-26828513 | MS.gene28593:intron | 40.0% | |
| AATGCTGCTACTATACGGAT+AGG | - | chr8.4:26829215-26829234 | MS.gene28593:CDS | 40.0% | |
| ACCTGGTCATATGATTCCTT+TGG | - | chr8.4:26827365-26827384 | MS.gene28593:intron | 40.0% | |
| AGCTGATAACTGTTGTGCAA+GGG | - | chr8.4:26828495-26828514 | MS.gene28593:intron | 40.0% | |
| AGGAGATGTATGTATGCCAT+TGG | - | chr8.4:26829558-26829577 | MS.gene28593:CDS | 40.0% | |
| ATAACTGTTGTGCAAGGGAT+TGG | - | chr8.4:26828500-26828519 | MS.gene28593:intron | 40.0% | |
| ATACCCTTGGATCAATGACT+TGG | - | chr8.4:26827683-26827702 | MS.gene28593:intron | 40.0% | |
| ATGCTTCCATTTCTATCACC+TGG | - | chr8.4:26827348-26827367 | MS.gene28593:intron | 40.0% | |
| CAACTTTATGAGATTGCGAG+CGG | - | chr8.4:26828179-26828198 | MS.gene28593:intron | 40.0% | |
| CATTAGAGAATTCGTGGAGA+AGG | - | chr8.4:26827629-26827648 | MS.gene28593:intron | 40.0% | |
| CCTGGTCATATGATTCCTTT+GGG | - | chr8.4:26827366-26827385 | MS.gene28593:intron | 40.0% | |
| CTATGAGGGATACTGTAAAG+AGG | + | chr8.4:26827752-26827771 | None:intergenic | 40.0% | |
| CTTCTCCACGAATTCTCTAA+TGG | + | chr8.4:26827631-26827650 | None:intergenic | 40.0% | |
| GAGACAATCCGCAAAAGTAA+GGG | - | chr8.4:26827909-26827928 | MS.gene28593:intron | 40.0% | |
| GAGCAAAAGGTGATTGAATG+AGG | + | chr8.4:26827846-26827865 | None:intergenic | 40.0% | |
| GTGAAGAGCTGAAAGAAAAG+TGG | - | chr8.4:26828267-26828286 | MS.gene28593:intron | 40.0% | |
| TAACTGTTGTGCAAGGGATT+GGG | - | chr8.4:26828501-26828520 | MS.gene28593:intron | 40.0% | |
| TACTGTAAAGAGGGAGAATC+CGG | + | chr8.4:26827742-26827761 | None:intergenic | 40.0% | |
| TGAACCCATTAGAGAATTCG+TGG | - | chr8.4:26827623-26827642 | MS.gene28593:intron | 40.0% | |
| TGAGACAATCCGCAAAAGTA+AGG | - | chr8.4:26827908-26827927 | MS.gene28593:intron | 40.0% | |
| TTTGAAGAGAAATCCGTGAG+GGG | - | chr8.4:26828047-26828066 | MS.gene28593:intron | 40.0% | |
| ! | AGGCTTTCAAGTGTTTCGAT+TGG | + | chr8.4:26829438-26829457 | None:intergenic | 40.0% |
| ! | ATTTTAAGCCACACTGCTGT+GGG | - | chr8.4:26828368-26828387 | MS.gene28593:intron | 40.0% |
| ! | CGGCCAGAAACAATTTTAAG+TGG | + | chr8.4:26829385-26829404 | None:intergenic | 40.0% |
| ! | GGAAGCATGTGAAGTTTCAA+TGG | + | chr8.4:26827336-26827355 | None:intergenic | 40.0% |
| ! | GTTTTGCGAATAAGACAAGC+TGG | + | chr8.4:26828026-26828045 | None:intergenic | 40.0% |
| ! | TCTAAGTTGGCTCAACTCAA+AGG | - | chr8.4:26828100-26828119 | MS.gene28593:intron | 40.0% |
| ! | TCTTGTTTCCCTTTCTTCTC+AGG | + | chr8.4:26828242-26828261 | None:intergenic | 40.0% |
| ! | TGAGAAAACCATGGGTTACA+AGG | - | chr8.4:26827986-26828005 | MS.gene28593:intron | 40.0% |
| !! | AGGGTTTTATCATTAAGGGG+TGG | - | chr8.4:26828330-26828349 | MS.gene28593:intron | 40.0% |
| !! | CTTTTGAAGAGAAATCCGTG+AGG | - | chr8.4:26828045-26828064 | MS.gene28593:intron | 40.0% |
| !! | GGGTTTTATCATTAAGGGGT+GGG | - | chr8.4:26828331-26828350 | MS.gene28593:intron | 40.0% |
| !! | GGTAAAGAAATGAGCATTGG+AGG | + | chr8.4:26827448-26827467 | None:intergenic | 40.0% |
| !! | TTGTTTCTGGCCGGAATAAA+TGG | - | chr8.4:26829392-26829411 | MS.gene28593:CDS | 40.0% |
| AACTGTTGTGCAAGGGATTG+GGG | - | chr8.4:26828502-26828521 | MS.gene28593:intron | 45.0% | |
| ACACAAGCTGTTCAAGAAGG+TGG | - | chr8.4:26828683-26828702 | MS.gene28593:intron | 45.0% | |
| ACCATGGGCAAGATATGCAA+AGG | - | chr8.4:26827585-26827604 | MS.gene28593:intron | 45.0% | |
| ACCTTTGCATATCTTGCCCA+TGG | + | chr8.4:26827589-26827608 | None:intergenic | 45.0% | |
| ATCGATGGAGGAGAGAGATT+TGG | + | chr8.4:26827469-26827488 | None:intergenic | 45.0% | |
| CACAAGCTGTTCAAGAAGGT+GGG | - | chr8.4:26828684-26828703 | MS.gene28593:intron | 45.0% | |
| CATCCCGAGTCCATGTATTT+AGG | + | chr8.4:26829458-26829477 | None:intergenic | 45.0% | |
| CCCAAAGGAATCATATGACC+AGG | + | chr8.4:26827369-26827388 | None:intergenic | 45.0% | |
| GCTACACAAGCTGTTCAAGA+AGG | - | chr8.4:26828680-26828699 | MS.gene28593:intron | 45.0% | |
| GGGTTGTTCCTGAGAAGAAA+GGG | - | chr8.4:26828231-26828250 | MS.gene28593:intron | 45.0% | |
| GGTGCATTCATGACACATTG+CGG | - | chr8.4:26828389-26828408 | MS.gene28593:intron | 45.0% | |
| GGTGGAGATATGAGGCTTAT+TGG | + | chr8.4:26827709-26827728 | None:intergenic | 45.0% | |
| GTGCATTCATGACACATTGC+GGG | - | chr8.4:26828390-26828409 | MS.gene28593:intron | 45.0% | |
| GTGTGCATGAGTGTCTAAGT+TGG | - | chr8.4:26828087-26828106 | MS.gene28593:intron | 45.0% | |
| TAGAACTGTTCTCCATGCAC+TGG | + | chr8.4:26828467-26828486 | None:intergenic | 45.0% | |
| TGGCCAAGTCATTGATCCAA+GGG | + | chr8.4:26827689-26827708 | None:intergenic | 45.0% | |
| TGGGTTGTTCCTGAGAAGAA+AGG | - | chr8.4:26828230-26828249 | MS.gene28593:intron | 45.0% | |
| TTCTGGCCGGAATAAATGGT+GGG | - | chr8.4:26829396-26829415 | MS.gene28593:CDS | 45.0% | |
| TTGGCCAAGTCATTGATCCA+AGG | + | chr8.4:26827690-26827709 | None:intergenic | 45.0% | |
| TTTGCATATCTTGCCCATGG+TGG | + | chr8.4:26827586-26827605 | None:intergenic | 45.0% | |
| ! | AAACCATGGGTTACAAGGCT+TGG | - | chr8.4:26827991-26828010 | MS.gene28593:intron | 45.0% |
| ! | AAGGCAATGGTGGAGATATG+AGG | + | chr8.4:26827717-26827736 | None:intergenic | 45.0% |
| ! | GATCCAAGGGTATACACAGT+CGG | + | chr8.4:26827676-26827695 | None:intergenic | 45.0% |
| ! | GATTTTAAGCCACACTGCTG+TGG | - | chr8.4:26828367-26828386 | MS.gene28593:intron | 45.0% |
| ! | TGGTGATGATCGTGACTTGT+TGG | + | chr8.4:26827422-26827441 | None:intergenic | 45.0% |
| ! | TTTCTGGCCGGAATAAATGG+TGG | - | chr8.4:26829395-26829414 | MS.gene28593:CDS | 45.0% |
| !! | CGATGAGTCCCTTACTTTTG+CGG | + | chr8.4:26827920-26827939 | None:intergenic | 45.0% |
| !! | CTTTGGTGGTGTTGAGCAAA+AGG | + | chr8.4:26827859-26827878 | None:intergenic | 45.0% |
| AAAGAGGGAGAATCCGGTGA+AGG | + | chr8.4:26827736-26827755 | None:intergenic | 50.0% | |
| ACCCCACCCACCATTTATTC+CGG | + | chr8.4:26829405-26829424 | None:intergenic | 50.0% | |
| ACCGTTGAGGCTATTAGTGC+AGG | - | chr8.4:26828422-26828441 | MS.gene28593:intron | 50.0% | |
| AGACGACGTGCTCAAGAGTT+TGG | - | chr8.4:26828650-26828669 | MS.gene28593:intron | 50.0% | |
| AGAGCTGCTATGTCACCCAA+AGG | + | chr8.4:26827384-26827403 | None:intergenic | 50.0% | |
| AGGGAAAGTCGATGGTGTGA+AGG | + | chr8.4:26827506-26827525 | None:intergenic | 50.0% | |
| ATATCTTGCCCATGGTGGCA+GGG | + | chr8.4:26827581-26827600 | None:intergenic | 50.0% | |
| ATCTCCACCATTGCCTTCAC+CGG | - | chr8.4:26827720-26827739 | MS.gene28593:intron | 50.0% | |
| ATGATTCAACGCCGTCAGGA+AGG | + | chr8.4:26827542-26827561 | None:intergenic | 50.0% | |
| ATGGACTCGGGATGATTTCG+TGG | - | chr8.4:26829464-26829483 | MS.gene28593:CDS | 50.0% | |
| CAGTCGGCAATGATGTAGTC+AGG | + | chr8.4:26827660-26827679 | None:intergenic | 50.0% | |
| CATTCATGACACATTGCGGG+TGG | - | chr8.4:26828393-26828412 | MS.gene28593:intron | 50.0% | |
| CCCTGCACTAATAGCCTCAA+CGG | + | chr8.4:26828426-26828445 | None:intergenic | 50.0% | |
| CCGTTGAGGCTATTAGTGCA+GGG | - | chr8.4:26828423-26828442 | MS.gene28593:intron | 50.0% | |
| GAAAGTCGATGGTGTGAAGG+CGG | + | chr8.4:26827503-26827522 | None:intergenic | 50.0% | |
| GACAATGATTCAACGCCGTC+AGG | + | chr8.4:26827546-26827565 | None:intergenic | 50.0% | |
| GACGACGTGCTCAAGAGTTT+GGG | - | chr8.4:26828651-26828670 | MS.gene28593:intron | 50.0% | |
| GCAACAGAGTGGTCTCTACA+TGG | - | chr8.4:26828536-26828555 | MS.gene28593:intron | 50.0% | |
| GCGAGCGGAATCGAAAATTC+AGG | - | chr8.4:26828194-26828213 | MS.gene28593:intron | 50.0% | |
| GGTTACAAGGCTTGGCATCT+TGG | - | chr8.4:26827999-26828018 | MS.gene28593:intron | 50.0% | |
| TGCACTAATAGCCTCAACGG+TGG | + | chr8.4:26828423-26828442 | None:intergenic | 50.0% | |
| TGGACTCGGGATGATTTCGT+GGG | - | chr8.4:26829465-26829484 | MS.gene28593:CDS | 50.0% | |
| ! | ATGCCAAGCCTTGTAACCCA+TGG | + | chr8.4:26827997-26828016 | None:intergenic | 50.0% |
| ! | GGACGATGGTGATGAAGCTA+AGG | - | chr8.4:26828622-26828641 | MS.gene28593:intron | 50.0% |
| ! | GTGAGGAGATTGATGGACGA+TGG | - | chr8.4:26828608-26828627 | MS.gene28593:intron | 50.0% |
| ! | TTGCCGACTGTGTATACCCT+TGG | - | chr8.4:26827670-26827689 | MS.gene28593:intron | 50.0% |
| !! | GAAATGAGCATTGGAGGGAG+TGG | + | chr8.4:26827442-26827461 | None:intergenic | 50.0% |
| !! | GATCGTGACTTGTTGGCCAT+GGG | + | chr8.4:26827415-26827434 | None:intergenic | 50.0% |
| !! | TGATCGTGACTTGTTGGCCA+TGG | + | chr8.4:26827416-26827435 | None:intergenic | 50.0% |
| ATGATCACGTGGCCAGTGCA+TGG | - | chr8.4:26828452-26828471 | MS.gene28593:intron | 55.0% | |
| CAGCAAGTCGACCTTCCTGA+CGG | - | chr8.4:26827528-26827547 | MS.gene28593:intron | 55.0% | |
| CAGGGATTCCGATGATCACG+TGG | - | chr8.4:26828441-26828460 | MS.gene28593:intron | 55.0% | |
| CATATCTTGCCCATGGTGGC+AGG | + | chr8.4:26827582-26827601 | None:intergenic | 55.0% | |
| CTCGCTCTCATTTCCCCTCA+CGG | + | chr8.4:26828063-26828082 | None:intergenic | 55.0% | |
| GAATCCGGTGAAGGCAATGG+TGG | + | chr8.4:26827727-26827746 | None:intergenic | 55.0% | |
| GAGGAACAACGGATCGATGG+AGG | + | chr8.4:26827481-26827500 | None:intergenic | 55.0% | |
| GCAGCTCTGTTTGCATCCCA+TGG | - | chr8.4:26827396-26827415 | MS.gene28593:intron | 55.0% | |
| GGAGAATCCGGTGAAGGCAA+TGG | + | chr8.4:26827730-26827749 | None:intergenic | 55.0% | |
| GTGTGAAGGCGGAGGAACAA+CGG | + | chr8.4:26827492-26827511 | None:intergenic | 55.0% | |
| TGAATGCACCCACAGCAGTG+TGG | + | chr8.4:26828379-26828398 | None:intergenic | 55.0% | |
| TGTTGTGCAAGGGATTGGGG+TGG | - | chr8.4:26828505-26828524 | MS.gene28593:intron | 55.0% | |
| TTGCTGGGAGGGAAAGTCGA+TGG | + | chr8.4:26827514-26827533 | None:intergenic | 55.0% | |
| ! | TGCACTGGCCACGTGATCAT+CGG | + | chr8.4:26828452-26828471 | None:intergenic | 55.0% |
| ! | TGGCCGGAATAAATGGTGGG+TGG | - | chr8.4:26829399-26829418 | MS.gene28593:CDS | 55.0% |
| !! | GCCGGAATAAATGGTGGGTG+GGG | - | chr8.4:26829401-26829420 | MS.gene28593:CDS | 55.0% |
| !! | GGCCGGAATAAATGGTGGGT+GGG | - | chr8.4:26829400-26829419 | MS.gene28593:CDS | 55.0% |
| !! | GTCAGGAAGGTCGACTTGCT+GGG | + | chr8.4:26827529-26827548 | None:intergenic | 55.0% |
| ACCACTGACCCTGCCACCAT+GGG | - | chr8.4:26827570-26827589 | MS.gene28593:intron | 60.0% | |
| AGTCGATGGTGTGAAGGCGG+AGG | + | chr8.4:26827500-26827519 | None:intergenic | 60.0% | |
| CAAGGGATTGGGGTGGAGGT+GGG | - | chr8.4:26828512-26828531 | MS.gene28593:intron | 60.0% | |
| CGTGAGGGGAAATGAGAGCG+AGG | - | chr8.4:26828061-26828080 | MS.gene28593:intron | 60.0% | |
| GCGGAGGAACAACGGATCGA+TGG | + | chr8.4:26827484-26827503 | None:intergenic | 60.0% | |
| TGGAGGTGGGTGCAACAGAG+TGG | - | chr8.4:26828525-26828544 | MS.gene28593:intron | 60.0% | |
| TGTGCAAGGGATTGGGGTGG+AGG | - | chr8.4:26828508-26828527 | MS.gene28593:intron | 60.0% | |
| !! | AGGAAGGTCGACTTGCTGGG+AGG | + | chr8.4:26827526-26827545 | None:intergenic | 60.0% |
| !! | CGTCAGGAAGGTCGACTTGC+TGG | + | chr8.4:26827530-26827549 | None:intergenic | 60.0% |
| !! | GGAAGGTCGACTTGCTGGGA+GGG | + | chr8.4:26827525-26827544 | None:intergenic | 60.0% |
| CACCACTGACCCTGCCACCA+TGG | - | chr8.4:26827569-26827588 | MS.gene28593:intron | 65.0% | |
| CATGGTGGCAGGGTCAGTGG+TGG | + | chr8.4:26827571-26827590 | None:intergenic | 65.0% | |
| CGGGTGGAACTCCACCGTTG+AGG | - | chr8.4:26828409-26828428 | MS.gene28593:intron | 65.0% | |
| GCAAGGGATTGGGGTGGAGG+TGG | - | chr8.4:26828511-26828530 | MS.gene28593:intron | 65.0% | |
| GCCCATGGTGGCAGGGTCAG+TGG | + | chr8.4:26827574-26827593 | None:intergenic | 70.0% | |
| GGTGGCAGGGTCAGTGGTGG+AGG | + | chr8.4:26827568-26827587 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 26827306 | 26829591 | 26827306 | ID=MS.gene28593 |
| chr8.4 | mRNA | 26827306 | 26829591 | 26827306 | ID=MS.gene28593.t1;Parent=MS.gene28593 |
| chr8.4 | exon | 26828973 | 26829591 | 26828973 | ID=MS.gene28593.t1.exon1;Parent=MS.gene28593.t1 |
| chr8.4 | CDS | 26828973 | 26829591 | 26828973 | ID=cds.MS.gene28593.t1;Parent=MS.gene28593.t1 |
| chr8.4 | exon | 26827306 | 26827337 | 26827306 | ID=MS.gene28593.t1.exon2;Parent=MS.gene28593.t1 |
| chr8.4 | CDS | 26827306 | 26827337 | 26827306 | ID=cds.MS.gene28593.t1;Parent=MS.gene28593.t1 |
| Gene Sequence |
| Protein sequence |
