Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29330.t1 | XP_003626299.1 | 99.2 | 261 | 2 | 0 | 6 | 266 | 22 | 282 | 2.10E-142 | 515 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29330.t1 | Q54TS4 | 35.8 | 193 | 122 | 2 | 68 | 259 | 126 | 317 | 4.5e-29 | 129.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29330.t1 | G7KYP9 | 99.2 | 261 | 2 | 0 | 6 | 266 | 22 | 282 | 1.5e-142 | 515.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene59238 | MS.gene29330 | PPI |
| MS.gene29533 | MS.gene29330 | PPI |
| MS.gene32501 | MS.gene29330 | PPI |
| MS.gene62170 | MS.gene29330 | PPI |
| MS.gene50119 | MS.gene29330 | PPI |
| MS.gene29330 | MS.gene63506 | PPI |
| MS.gene29330 | MS.gene008140 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29330.t1 | MTR_7g113620 | 99.234 | 261 | 2 | 0 | 6 | 266 | 22 | 282 | 0.0 | 527 |
| MS.gene29330.t1 | MTR_5g081040 | 37.805 | 246 | 142 | 5 | 19 | 262 | 36 | 272 | 1.68e-52 | 172 |
| MS.gene29330.t1 | MTR_3g069150 | 38.776 | 245 | 139 | 4 | 20 | 262 | 37 | 272 | 2.82e-49 | 164 |
| MS.gene29330.t1 | MTR_5g081040 | 39.423 | 208 | 122 | 2 | 57 | 262 | 7 | 212 | 2.30e-48 | 159 |
| MS.gene29330.t1 | MTR_3g069170 | 39.048 | 210 | 120 | 3 | 20 | 227 | 37 | 240 | 5.50e-43 | 147 |
| MS.gene29330.t1 | MTR_3g069150 | 38.764 | 178 | 101 | 3 | 20 | 195 | 37 | 208 | 3.54e-33 | 122 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29330.t1 | AT5G27490 | 80.843 | 261 | 50 | 0 | 6 | 266 | 22 | 282 | 4.27e-162 | 451 |
| MS.gene29330.t1 | AT3G05280 | 78.544 | 261 | 56 | 0 | 6 | 266 | 21 | 281 | 1.42e-147 | 414 |
| MS.gene29330.t1 | AT2G39805 | 38.776 | 245 | 137 | 5 | 20 | 262 | 41 | 274 | 1.86e-54 | 177 |
| MS.gene29330.t1 | AT2G39805 | 38.776 | 245 | 138 | 5 | 20 | 262 | 41 | 275 | 5.24e-53 | 173 |
Find 84 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCAACTATTCTGCCTATA+TGG | 0.275933 | 7.2:-3678241 | MS.gene29330:CDS |
| AAAACAAAATGGCATATAGA+TGG | 0.306893 | 7.2:-3681846 | None:intergenic |
| GAAAAGTCTACTTACAAATC+AGG | 0.336533 | 7.2:+3680194 | None:intergenic |
| GGAAGATCACCGGTGGTTCT+AGG | 0.343439 | 7.2:-3681290 | MS.gene29330:CDS |
| TACTCAGGTATGGACCATTC+TGG | 0.345340 | 7.2:-3678462 | MS.gene29330:intron |
| AGGTGGTTCTTCATTGTTGC+TGG | 0.370335 | 7.2:-3677981 | MS.gene29330:CDS |
| TGGGTGATTGCAGGTGTGGC+AGG | 0.371118 | 7.2:-3678065 | MS.gene29330:CDS |
| GAGCTGGAATAAAGACAAAC+AGG | 0.390832 | 7.2:+3678212 | None:intergenic |
| CAGTCCAGTTTGCTCTTAAA+CGG | 0.393674 | 7.2:+3677899 | None:intergenic |
| TTCTTCTGATGAACCTCAGC+AGG | 0.399077 | 7.2:-3680351 | MS.gene29330:CDS |
| GTTTGTCTTTATTCCAGCTC+TGG | 0.400569 | 7.2:-3678209 | MS.gene29330:intron |
| CTCAGCAGGGTGGTTGGCTT+CGG | 0.402877 | 7.2:-3680337 | MS.gene29330:CDS |
| TCATTAAAAGTTCCTCTGAA+TGG | 0.411432 | 7.2:+3680233 | None:intergenic |
| ACAAGCTGAAGGATCAGAAA+TGG | 0.419782 | 7.2:-3678378 | MS.gene29330:CDS |
| ACGGTGACCGGTGGTGGATC+TGG | 0.425336 | 7.2:+3681501 | None:intergenic |
| ATATTCAGATGGGTGATTGC+AGG | 0.441456 | 7.2:-3678074 | MS.gene29330:CDS |
| GAAGTATCGACATCAAAGTA+TGG | 0.450124 | 7.2:+3680290 | None:intergenic |
| GAGAAGCAACTTACCAGAGC+TGG | 0.460196 | 7.2:+3678196 | None:intergenic |
| AATCTGGTGACTTGGTCTGC+TGG | 0.463897 | 7.2:-3678343 | MS.gene29330:CDS |
| ATCTTCCCCTGAGCTTGTGA+TGG | 0.468252 | 7.2:+3681306 | None:intergenic |
| CAAACAGGGAATATCCATAT+AGG | 0.469322 | 7.2:+3678227 | None:intergenic |
| ATTTCCTCCATCACAAGCTC+AGG | 0.469322 | 7.2:-3681313 | MS.gene29330:CDS |
| CATTTGTGGCACTTAACCTC+CGG | 0.483822 | 7.2:-3678028 | MS.gene29330:CDS |
| ATGGGACTATGACATAAATC+TGG | 0.483862 | 7.2:-3678359 | MS.gene29330:CDS |
| GTGTTTGTCCATTGTCCCAT+TGG | 0.488665 | 7.2:-3678099 | MS.gene29330:CDS |
| AATATTTGTAGCAGCATCCA+TGG | 0.496967 | 7.2:-3678425 | MS.gene29330:CDS |
| ATGAACCTCAGCAGGGTGGT+TGG | 0.497811 | 7.2:-3680343 | MS.gene29330:CDS |
| AACTTGACGGTGACCGGTGG+TGG | 0.508137 | 7.2:+3681495 | None:intergenic |
| GTTCATGTCAGCAACATTTG+TGG | 0.509994 | 7.2:-3678042 | MS.gene29330:CDS |
| CAAGCTGAAGGATCAGAAAT+GGG | 0.517844 | 7.2:-3678377 | MS.gene29330:CDS |
| CCCATCTGAATATATCCAAT+GGG | 0.523908 | 7.2:+3678084 | None:intergenic |
| CAAGCTCAGGGGAAGATCAC+CGG | 0.528014 | 7.2:-3681300 | MS.gene29330:CDS |
| CCAGTGAACTTGACGGTGAC+CGG | 0.528555 | 7.2:+3681489 | None:intergenic |
| GTAAAGACAAAGAGGAATGA+TGG | 0.529871 | 7.2:+3678300 | None:intergenic |
| CGGGCACATATCATGTCGGC+AGG | 0.536798 | 7.2:-3678008 | MS.gene29330:CDS |
| CCCATTGGATATATTCAGAT+GGG | 0.538766 | 7.2:-3678084 | MS.gene29330:CDS |
| ATTTGTGGCACTTAACCTCC+GGG | 0.539347 | 7.2:-3678027 | MS.gene29330:CDS |
| AAACAAAATGGCATATAGAT+GGG | 0.541303 | 7.2:-3681845 | None:intergenic |
| CCGGTCACCGTCAAGTTCAC+TGG | 0.541760 | 7.2:-3681489 | MS.gene29330:intron |
| TCCCATTGGATATATTCAGA+TGG | 0.544799 | 7.2:-3678085 | MS.gene29330:CDS |
| TTCCCCTGAGCTTGTGATGG+AGG | 0.549325 | 7.2:+3681309 | None:intergenic |
| TCATCAGAAGAACCAGATGC+AGG | 0.552062 | 7.2:+3680362 | None:intergenic |
| GTTCGTACCAGTGAACTTGA+CGG | 0.552167 | 7.2:+3681482 | None:intergenic |
| GGGTGATTGCAGGTGTGGCA+GGG | 0.554516 | 7.2:-3678064 | MS.gene29330:CDS |
| ATGACATAAATCTGGTGACT+TGG | 0.561043 | 7.2:-3678351 | MS.gene29330:CDS |
| AAAAGTCTACTTACAAATCA+GGG | 0.568494 | 7.2:+3680195 | None:intergenic |
| ACCCATCTGAATATATCCAA+TGG | 0.568674 | 7.2:+3678083 | None:intergenic |
| ATATCATGTCGGCAGGTGAA+AGG | 0.568955 | 7.2:-3678001 | MS.gene29330:CDS |
| ATACTTTGATGTCGATACTT+CGG | 0.569777 | 7.2:-3680288 | MS.gene29330:CDS |
| CTGCCGACATGATATGTGCC+CGG | 0.570194 | 7.2:+3678009 | None:intergenic |
| GAATATATCCAATGGGACAA+TGG | 0.572781 | 7.2:+3678091 | None:intergenic |
| GACCGGTGGTGGATCTGGAA+CGG | 0.576104 | 7.2:+3681506 | None:intergenic |
| CCGGTACAGAGAAGTATTTG+AGG | 0.576562 | 7.2:+3678272 | None:intergenic |
| CCTCAAATACTTCTCTGTAC+CGG | 0.581136 | 7.2:-3678272 | MS.gene29330:CDS |
| TCGAGGTGGCCTAGAACCAC+CGG | 0.584989 | 7.2:+3681281 | None:intergenic |
| CAAATACTTCTCTGTACCGG+CGG | 0.587474 | 7.2:-3678269 | MS.gene29330:CDS |
| GTCTACTTACAAATCAGGGT+TGG | 0.588422 | 7.2:+3680199 | None:intergenic |
| AATGTGGTGCAAATCCAGAA+TGG | 0.589223 | 7.2:+3678448 | None:intergenic |
| AGGATTACGTAAAGACAAAG+AGG | 0.596767 | 7.2:+3678292 | None:intergenic |
| GGCCGTTCCAGATCCACCAC+CGG | 0.597655 | 7.2:-3681508 | MS.gene29330:CDS |
| CAGATGGGTGATTGCAGGTG+TGG | 0.599018 | 7.2:-3678069 | MS.gene29330:CDS |
| TCTTCTGATGAACCTCAGCA+GGG | 0.619382 | 7.2:-3680350 | MS.gene29330:CDS |
| ATATTTGTAGCAGCATCCAT+GGG | 0.619634 | 7.2:-3678424 | MS.gene29330:CDS |
| AAATACTTCTCTGTACCGGC+GGG | 0.619911 | 7.2:-3678268 | MS.gene29330:CDS |
| ATATATAGCACACAAGCTGA+AGG | 0.625103 | 7.2:-3678389 | MS.gene29330:CDS |
| AGGCCACCTCGAGATGCAGA+TGG | 0.625410 | 7.2:-3681270 | MS.gene29330:intron |
| TTTCCTCCATCACAAGCTCA+GGG | 0.627295 | 7.2:-3681312 | MS.gene29330:CDS |
| GAGGTAGATCTTTAATACAA+CGG | 0.629298 | 7.2:+3677932 | None:intergenic |
| CGAAGCCAACCACCCTGCTG+AGG | 0.631145 | 7.2:+3680338 | None:intergenic |
| ATATGTCACAAATGTGCCCA+TGG | 0.631340 | 7.2:+3678408 | None:intergenic |
| CTTAAACGGATACTGTGAAG+AGG | 0.639532 | 7.2:+3677913 | None:intergenic |
| TCTGATGAACCTCAGCAGGG+TGG | 0.640708 | 7.2:-3680347 | MS.gene29330:CDS |
| TCATGTCGGCAGGTGAAAGG+TGG | 0.649545 | 7.2:-3677998 | MS.gene29330:CDS |
| ATACTTCGGATGTTCTAGAG+AGG | 0.653109 | 7.2:-3680274 | MS.gene29330:CDS |
| AAAATACCATCTGCATCTCG+AGG | 0.655529 | 7.2:+3681264 | None:intergenic |
| TGCTGCTACAAATATTAATG+TGG | 0.659289 | 7.2:+3678432 | None:intergenic |
| AATAGTTGAACAAGTCCCGC+CGG | 0.666349 | 7.2:+3678253 | None:intergenic |
| CCTCCGGGCACATATCATGT+CGG | 0.666772 | 7.2:-3678012 | MS.gene29330:CDS |
| ATACCATCTGCATCTCGAGG+TGG | 0.680065 | 7.2:+3681267 | None:intergenic |
| AGCTGGAATAAAGACAAACA+GGG | 0.694942 | 7.2:+3678213 | None:intergenic |
| TTCCTCCATCACAAGCTCAG+GGG | 0.701946 | 7.2:-3681311 | MS.gene29330:CDS |
| GCTCAGGGGAAGATCACCGG+TGG | 0.707782 | 7.2:-3681297 | MS.gene29330:CDS |
| GTGAACTTGACGGTGACCGG+TGG | 0.721035 | 7.2:+3681492 | None:intergenic |
| CCGACATGATATGTGCCCGG+AGG | 0.738859 | 7.2:+3678012 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAGAATTAGAGTATAA+TGG | + | chr7.2:3680909-3680928 | None:intergenic | 15.0% |
| !! | AAAATAATGTAGATGATAGT+AGG | - | chr7.2:3679740-3679759 | MS.gene29330:intron | 20.0% |
| !! | ACTCATATTCAAAGAATTAT+TGG | + | chr7.2:3679611-3679630 | None:intergenic | 20.0% |
| !! | AGTAGTACTATATAAAATAC+TGG | - | chr7.2:3681117-3681136 | MS.gene29330:intron | 20.0% |
| !! | ATATCAGAAATAAGTATTAG+AGG | + | chr7.2:3680776-3680795 | None:intergenic | 20.0% |
| !! | ATTAAATAGTGTAGTTAAAC+TGG | - | chr7.2:3679693-3679712 | MS.gene29330:intron | 20.0% |
| !! | ATTGAAGAACTATAATACAT+CGG | - | chr7.2:3680096-3680115 | MS.gene29330:intron | 20.0% |
| !! | CAATATGAACTAACATAATT+TGG | - | chr7.2:3680598-3680617 | MS.gene29330:intron | 20.0% |
| !! | TAATTCTTTGAATATGAGTT+AGG | - | chr7.2:3679612-3679631 | MS.gene29330:intron | 20.0% |
| !! | TACAGATCAAATATCAAAAT+TGG | + | chr7.2:3678583-3678602 | None:intergenic | 20.0% |
| !! | TATACTCTAATTCTATTATC+TGG | - | chr7.2:3680910-3680929 | MS.gene29330:intron | 20.0% |
| !! | TATTATTGTGATTAAAAGAC+TGG | + | chr7.2:3678554-3678573 | None:intergenic | 20.0% |
| !! | TCAAAATCATCATTAAAAGA+GGG | - | chr7.2:3679870-3679889 | MS.gene29330:intron | 20.0% |
| !! | TCAATATTCAATTTCAACTA+TGG | - | chr7.2:3679642-3679661 | MS.gene29330:intron | 20.0% |
| !! | TTCAAAATCATCATTAAAAG+AGG | - | chr7.2:3679869-3679888 | MS.gene29330:intron | 20.0% |
| !!! | AATTAACCGATTCAATTAAA+CGG | - | chr7.2:3678326-3678345 | MS.gene29330:CDS | 20.0% |
| !!! | ATAAAAATTTGACTTCTTCA+AGG | - | chr7.2:3681592-3681611 | MS.gene29330:intron | 20.0% |
| !!! | CTAATACTTATTTCTGATAT+AGG | - | chr7.2:3680776-3680795 | MS.gene29330:intron | 20.0% |
| !!! | TATTATGTTTTCCCTTTATT+TGG | - | chr7.2:3680144-3680163 | MS.gene29330:intron | 20.0% |
| !!! | TATTTTATATAGTACTACTC+TGG | + | chr7.2:3681116-3681135 | None:intergenic | 20.0% |
| !!! | TTTAGTCTCTTTTTTATTTG+TGG | - | chr7.2:3680938-3680957 | MS.gene29330:intron | 20.0% |
| ! | AAAAGTCTACTTACAAATCA+GGG | + | chr7.2:3679560-3679579 | None:intergenic | 25.0% |
| ! | AAAATCGCTCAAAAAAAAAG+AGG | - | chr7.2:3679917-3679936 | MS.gene29330:intron | 25.0% |
| ! | AAAATCGCTCAAAAAAAAGA+GGG | - | chr7.2:3680010-3680029 | MS.gene29330:intron | 25.0% |
| ! | AAAGAAGAGAAAAGTTATAC+AGG | + | chr7.2:3678152-3678171 | None:intergenic | 25.0% |
| ! | AAATCGCTCAAAAAAAAAGA+GGG | - | chr7.2:3679918-3679937 | MS.gene29330:intron | 25.0% |
| ! | AACATAATTTGGAGATTACA+AGG | - | chr7.2:3680609-3680628 | MS.gene29330:intron | 25.0% |
| ! | AATCGCTCAAAAAAAAAAAG+AGG | + | chr7.2:3679818-3679837 | None:intergenic | 25.0% |
| ! | ATCGCTCAAAAAAAAAAAGA+GGG | + | chr7.2:3679817-3679836 | None:intergenic | 25.0% |
| ! | ATTCAATTTCAACTATGGTT+TGG | - | chr7.2:3679647-3679666 | MS.gene29330:intron | 25.0% |
| ! | CAAAATCATCATTAAAAGAG+GGG | - | chr7.2:3679871-3679890 | MS.gene29330:intron | 25.0% |
| ! | CAGAAAGAAAAAGAAAAGAA+AGG | + | chr7.2:3678180-3678199 | None:intergenic | 25.0% |
| ! | CATATTTACTTGATATGCAT+GGG | - | chr7.2:3679132-3679151 | MS.gene29330:intron | 25.0% |
| ! | GAAATCAGAATGATAGAATT+TGG | + | chr7.2:3678204-3678223 | None:intergenic | 25.0% |
| ! | GATTGAGGTAATTAATTTCA+CGG | + | chr7.2:3678654-3678673 | None:intergenic | 25.0% |
| ! | GCGAACATATAATAATCTAT+TGG | + | chr7.2:3680280-3680299 | None:intergenic | 25.0% |
| ! | GTTCTTCAATAATACTATCA+TGG | + | chr7.2:3680086-3680105 | None:intergenic | 25.0% |
| ! | TAGAAAACATAAGAACTAAC+AGG | + | chr7.2:3680317-3680336 | None:intergenic | 25.0% |
| ! | TCATATTTACTTGATATGCA+TGG | - | chr7.2:3679131-3679150 | MS.gene29330:intron | 25.0% |
| !! | AAAAGCAACTTTTCCTTTTA+GGG | - | chr7.2:3680653-3680672 | MS.gene29330:intron | 25.0% |
| !! | AAAATTTCTAGAAGCACAAA+AGG | + | chr7.2:3679271-3679290 | None:intergenic | 25.0% |
| !! | GATTTTGAACAAAACACAAT+TGG | + | chr7.2:3679858-3679877 | None:intergenic | 25.0% |
| !! | TCAAACAAAGTTGAAGTATT+TGG | + | chr7.2:3681059-3681078 | None:intergenic | 25.0% |
| !!! | TCATGAACTGGATTTTTTTA+GGG | + | chr7.2:3680471-3680490 | None:intergenic | 25.0% |
| !!! | TGTTGCTAGTTTTTTAACTT+TGG | - | chr7.2:3681222-3681241 | MS.gene29330:intron | 25.0% |
| !!! | TTCATGAACTGGATTTTTTT+AGG | + | chr7.2:3680472-3680491 | None:intergenic | 25.0% |
| !!! | TTGTGCTTCTAGAAATTTTA+TGG | - | chr7.2:3679272-3679291 | MS.gene29330:intron | 25.0% |
| AAAACACAATTGGCAAAAGA+TGG | + | chr7.2:3679848-3679867 | None:intergenic | 30.0% | |
| AAACACAATTGGCAAAAGAT+GGG | + | chr7.2:3679847-3679866 | None:intergenic | 30.0% | |
| AAATCCAGTTCATGAAACAT+AGG | - | chr7.2:3680476-3680495 | MS.gene29330:intron | 30.0% | |
| AAATCGCTCAAAAAAAAGAG+GGG | - | chr7.2:3680011-3680030 | MS.gene29330:intron | 30.0% | |
| AACAAAAGGTTTCACATTTC+AGG | + | chr7.2:3681626-3681645 | None:intergenic | 30.0% | |
| AAGAAAAAGAGATAGATCTG+TGG | - | chr7.2:3678044-3678063 | MS.gene29330:CDS | 30.0% | |
| AATCGCTCAAAAAAAAAGAG+GGG | - | chr7.2:3679919-3679938 | MS.gene29330:intron | 30.0% | |
| ACAATTAGCAAAAAGATAGG+GGG | - | chr7.2:3679954-3679973 | MS.gene29330:intron | 30.0% | |
| AGAAAAGACTACAAGTGTTA+AGG | + | chr7.2:3680846-3680865 | None:intergenic | 30.0% | |
| AGGGATTGAACTGAAAAAAT+TGG | + | chr7.2:3680452-3680471 | None:intergenic | 30.0% | |
| AGTGATCCGTTTAATTGAAT+CGG | + | chr7.2:3678335-3678354 | None:intergenic | 30.0% | |
| ATACTTTGATGTCGATACTT+CGG | - | chr7.2:3679464-3679483 | MS.gene29330:intron | 30.0% | |
| ATTTGTGGAAACATCATATG+TGG | - | chr7.2:3680953-3680972 | MS.gene29330:intron | 30.0% | |
| CAAAATCGCTCAAAAAAAAG+AGG | - | chr7.2:3680009-3680028 | MS.gene29330:intron | 30.0% | |
| CACAATTAGCAAAAAGATAG+GGG | - | chr7.2:3679953-3679972 | MS.gene29330:intron | 30.0% | |
| GAAAAGTCTACTTACAAATC+AGG | + | chr7.2:3679561-3679580 | None:intergenic | 30.0% | |
| GAGGTAGATCTTTAATACAA+CGG | + | chr7.2:3681823-3681842 | None:intergenic | 30.0% | |
| GCACAATTAGCAAAAAGATA+GGG | - | chr7.2:3679952-3679971 | MS.gene29330:intron | 30.0% | |
| TAACAGAATGAGAATGCAAT+TGG | + | chr7.2:3678307-3678326 | None:intergenic | 30.0% | |
| TACTATAGACCTGTTTGAAT+TGG | + | chr7.2:3678958-3678977 | None:intergenic | 30.0% | |
| TCAAATAAGCCAATTCAAAC+AGG | - | chr7.2:3678946-3678965 | MS.gene29330:intron | 30.0% | |
| TCATTAAAAGTTCCTCTGAA+TGG | + | chr7.2:3679522-3679541 | None:intergenic | 30.0% | |
| TCGCTCAAAAAAAAAAAGAG+GGG | + | chr7.2:3679816-3679835 | None:intergenic | 30.0% | |
| TCTGGTCAAAGTTAAAAAAC+TGG | + | chr7.2:3681164-3681183 | None:intergenic | 30.0% | |
| TGCTGCTACAAATATTAATG+TGG | + | chr7.2:3681323-3681342 | None:intergenic | 30.0% | |
| TTATATGTGTGATTGTCTGT+TGG | - | chr7.2:3679172-3679191 | MS.gene29330:intron | 30.0% | |
| ! | CAAAAGCAACTTTTCCTTTT+AGG | - | chr7.2:3680652-3680671 | MS.gene29330:intron | 30.0% |
| ! | TATAATACATCGGTGGTTTT+GGG | - | chr7.2:3680106-3680125 | MS.gene29330:intron | 30.0% |
| ! | TATACGAACTGATTCTAACA+TGG | + | chr7.2:3680553-3680572 | None:intergenic | 30.0% |
| !! | AATACTGGTGTTCTAAGAAA+AGG | - | chr7.2:3681132-3681151 | MS.gene29330:intron | 30.0% |
| !! | CTAAAAGGAAAAGTTGCTTT+TGG | + | chr7.2:3680654-3680673 | None:intergenic | 30.0% |
| !! | TATGTTTTCCCTTTATTTGG+CGG | - | chr7.2:3680147-3680166 | MS.gene29330:intron | 30.0% |
| !! | TTTTTGCTTACATTTGAGAC+CGG | + | chr7.2:3680996-3681015 | None:intergenic | 30.0% |
| !!! | GCTAGTTTTTTAACTTTGGA+GGG | - | chr7.2:3681226-3681245 | MS.gene29330:intron | 30.0% |
| !!! | TGCTAGTTTTTTAACTTTGG+AGG | - | chr7.2:3681225-3681244 | MS.gene29330:intron | 30.0% |
| AAAACTGAGTAAGCTAGTAG+CGG | - | chr7.2:3677963-3677982 | MS.gene29330:CDS | 35.0% | |
| AACACAATTGGCAAAAGATG+GGG | + | chr7.2:3679846-3679865 | None:intergenic | 35.0% | |
| AACATTCTTACACACGATTG+AGG | + | chr7.2:3678669-3678688 | None:intergenic | 35.0% | |
| AACTCCTATGTTTCATGAAC+TGG | + | chr7.2:3680483-3680502 | None:intergenic | 35.0% | |
| AAGTCCTTGTAAGACTGTTT+GGG | + | chr7.2:3678910-3678929 | None:intergenic | 35.0% | |
| AAGTGAACTGAGTATAGTCA+GGG | - | chr7.2:3680398-3680417 | MS.gene29330:intron | 35.0% | |
| AATATTTGTAGCAGCATCCA+TGG | - | chr7.2:3681327-3681346 | MS.gene29330:CDS | 35.0% | |
| AATCGCTCAAAAAAAAGAGG+GGG | - | chr7.2:3680012-3680031 | MS.gene29330:intron | 35.0% | |
| AATCGTGTGTAAGAATGTTC+AGG | - | chr7.2:3678670-3678689 | MS.gene29330:intron | 35.0% | |
| ACAATTAGCAAAAGATAGGG+GGG | + | chr7.2:3679781-3679800 | None:intergenic | 35.0% | |
| ACCATAATTGTACTCAGGTA+TGG | - | chr7.2:3681280-3681299 | MS.gene29330:CDS | 35.0% | |
| ACCCATCTGAATATATCCAA+TGG | + | chr7.2:3681672-3681691 | None:intergenic | 35.0% | |
| AGATTCAGTTGTGAGTTACT+TGG | + | chr7.2:3679061-3679080 | None:intergenic | 35.0% | |
| AGCTGGAATAAAGACAAACA+GGG | + | chr7.2:3681542-3681561 | None:intergenic | 35.0% | |
| AGGATTACGTAAAGACAAAG+AGG | + | chr7.2:3681463-3681482 | None:intergenic | 35.0% | |
| AGTAAAAGTTAACTCAACCC+CGG | + | chr7.2:3680177-3680196 | None:intergenic | 35.0% | |
| AGTATAATGGCTAGTAGTCA+TGG | + | chr7.2:3680896-3680915 | None:intergenic | 35.0% | |
| AGTGCAATTGAACACAAAGA+TGG | - | chr7.2:3679982-3680001 | MS.gene29330:intron | 35.0% | |
| ATATATAGCACACAAGCTGA+AGG | - | chr7.2:3681363-3681382 | MS.gene29330:intron | 35.0% | |
| ATATTTGTAGCAGCATCCAT+GGG | - | chr7.2:3681328-3681347 | MS.gene29330:CDS | 35.0% | |
| ATCGCTCAAAAAAAAAGAGG+GGG | - | chr7.2:3679920-3679939 | MS.gene29330:intron | 35.0% | |
| ATCGTGTGTAAGAATGTTCA+GGG | - | chr7.2:3678671-3678690 | MS.gene29330:intron | 35.0% | |
| ATGACATAAATCTGGTGACT+TGG | - | chr7.2:3681401-3681420 | MS.gene29330:intron | 35.0% | |
| ATGGGACTATGACATAAATC+TGG | - | chr7.2:3681393-3681412 | MS.gene29330:intron | 35.0% | |
| CAAAACTGGTGCATATTACT+GGG | - | chr7.2:3680711-3680730 | MS.gene29330:intron | 35.0% | |
| CAAACACTGCACAAAACAAA+AGG | + | chr7.2:3681640-3681659 | None:intergenic | 35.0% | |
| CAAACAGGGAATATCCATAT+AGG | + | chr7.2:3681528-3681547 | None:intergenic | 35.0% | |
| CAATTAGCAAAAAGATAGGG+GGG | - | chr7.2:3679955-3679974 | MS.gene29330:intron | 35.0% | |
| CACAATTAGCAAAAGATAGG+GGG | + | chr7.2:3679782-3679801 | None:intergenic | 35.0% | |
| CACTTAATCTCGTTTCTTTC+AGG | - | chr7.2:3678223-3678242 | MS.gene29330:CDS | 35.0% | |
| CCCATCTGAATATATCCAAT+GGG | + | chr7.2:3681671-3681690 | None:intergenic | 35.0% | |
| CCCATTGGATATATTCAGAT+GGG | - | chr7.2:3681668-3681687 | MS.gene29330:intron | 35.0% | |
| CCTAAAAGCTTGAATGGTTA+CGG | - | chr7.2:3680808-3680827 | MS.gene29330:intron | 35.0% | |
| CGCACAATTAGCAAAAAGAT+AGG | - | chr7.2:3679951-3679970 | MS.gene29330:intron | 35.0% | |
| CGCACAATTAGCAAAAGATA+GGG | + | chr7.2:3679784-3679803 | None:intergenic | 35.0% | |
| CGCTCAAAAAAAAAAAGAGG+GGG | + | chr7.2:3679815-3679834 | None:intergenic | 35.0% | |
| CGTATATAGTCACTATTCCA+GGG | - | chr7.2:3680567-3680586 | MS.gene29330:intron | 35.0% | |
| GAAATAAGCTGAATAACTCG+TGG | - | chr7.2:3678855-3678874 | MS.gene29330:intron | 35.0% | |
| GAAGAACTATAATACATCGG+TGG | - | chr7.2:3680099-3680118 | MS.gene29330:intron | 35.0% | |
| GAATATATCCAATGGGACAA+TGG | + | chr7.2:3681664-3681683 | None:intergenic | 35.0% | |
| GCACAATTAGCAAAAGATAG+GGG | + | chr7.2:3679783-3679802 | None:intergenic | 35.0% | |
| GCATATTACTGGGACTAAAT+TGG | - | chr7.2:3680721-3680740 | MS.gene29330:intron | 35.0% | |
| GGAATTTAGAAAGATGTGAC+TGG | - | chr7.2:3679193-3679212 | MS.gene29330:intron | 35.0% | |
| GTAAAGACAAAGAGGAATGA+TGG | + | chr7.2:3681455-3681474 | None:intergenic | 35.0% | |
| GTGCAATTGAACACAAAGAT+GGG | - | chr7.2:3679983-3680002 | MS.gene29330:intron | 35.0% | |
| GTTCAACTATTCTGCCTATA+TGG | - | chr7.2:3681511-3681530 | MS.gene29330:intron | 35.0% | |
| TAACATGGACGAGTATTACA+AGG | + | chr7.2:3680538-3680557 | None:intergenic | 35.0% | |
| TAAGTCCTTGTAAGACTGTT+TGG | + | chr7.2:3678911-3678930 | None:intergenic | 35.0% | |
| TAGCTTATGAAAACGGCTTA+TGG | + | chr7.2:3678818-3678837 | None:intergenic | 35.0% | |
| TCATTAAAAGAGGGGAAAAG+AGG | - | chr7.2:3679879-3679898 | MS.gene29330:intron | 35.0% | |
| TCCAGGATAGCTTATGAAAA+CGG | + | chr7.2:3678825-3678844 | None:intergenic | 35.0% | |
| TCCATACCTGAGTACAATTA+TGG | + | chr7.2:3681284-3681303 | None:intergenic | 35.0% | |
| TCCCATTGGATATATTCAGA+TGG | - | chr7.2:3681667-3681686 | MS.gene29330:intron | 35.0% | |
| TCGCACAATTAGCAAAAGAT+AGG | + | chr7.2:3679785-3679804 | None:intergenic | 35.0% | |
| TCGTATATAGTCACTATTCC+AGG | - | chr7.2:3680566-3680585 | MS.gene29330:intron | 35.0% | |
| TCTGCATAAAATGAGTCACA+TGG | + | chr7.2:3679357-3679376 | None:intergenic | 35.0% | |
| TGCAATTGAACACAAAGATG+GGG | - | chr7.2:3679984-3680003 | MS.gene29330:intron | 35.0% | |
| TTCAAACAGGTCTATAGTAG+AGG | - | chr7.2:3678959-3678978 | MS.gene29330:intron | 35.0% | |
| TTCATATTGATGTTAGTCCC+TGG | + | chr7.2:3680587-3680606 | None:intergenic | 35.0% | |
| TTCCGAGATATACTTCTTCA+CGG | + | chr7.2:3680217-3680236 | None:intergenic | 35.0% | |
| ! | ATTGATAGTCAACAGCTTCA+AGG | - | chr7.2:3678119-3678138 | MS.gene29330:intron | 35.0% |
| ! | CTATAATACATCGGTGGTTT+TGG | - | chr7.2:3680105-3680124 | MS.gene29330:intron | 35.0% |
| ! | TAAGAACTAACAGGTTTGCT+TGG | + | chr7.2:3680308-3680327 | None:intergenic | 35.0% |
| ! | TCATACATAGTTGATGTAGC+TGG | - | chr7.2:3681020-3681039 | MS.gene29330:intron | 35.0% |
| ! | TCATTTTCAAAACCTGCATC+TGG | - | chr7.2:3679378-3679397 | MS.gene29330:intron | 35.0% |
| ! | TCTTTTGATCATCGTTGTGT+TGG | - | chr7.2:3680505-3680524 | MS.gene29330:intron | 35.0% |
| !! | AATACTGGTGTTCTAAGAAG+AGG | - | chr7.2:3681198-3681217 | MS.gene29330:intron | 35.0% |
| !! | GAAGTATCGACATCAAAGTA+TGG | + | chr7.2:3679465-3679484 | None:intergenic | 35.0% |
| !! | GTATTAGAGGATTTTGACGA+TGG | + | chr7.2:3680763-3680782 | None:intergenic | 35.0% |
| !! | TTCCTTTTAGGGATTCAAAC+CGG | - | chr7.2:3680664-3680683 | MS.gene29330:intron | 35.0% |
| !!! | CATTATTTTAGAACTGCCAG+TGG | + | chr7.2:3679729-3679748 | None:intergenic | 35.0% |
| !!! | GATTCACTTTTTCCATTCAG+AGG | - | chr7.2:3679507-3679526 | MS.gene29330:intron | 35.0% |
| AAAATACCATCTGCATCTCG+AGG | + | chr7.2:3678491-3678510 | None:intergenic | 40.0% | |
| AAACCGGGTAGAATGTTGTA+GGG | - | chr7.2:3680680-3680699 | MS.gene29330:intron | 40.0% | |
| AACGGATCACTTTCCATTGT+CGG | - | chr7.2:3678344-3678363 | MS.gene29330:CDS | 40.0% | |
| AAGGAACTGTAAGGGAAACA+TGG | - | chr7.2:3679219-3679238 | MS.gene29330:intron | 40.0% | |
| AATGAAATTCGCGCTACTTG+CGG | + | chr7.2:3678373-3678392 | None:intergenic | 40.0% | |
| AATGTGGTGCAAATCCAGAA+TGG | + | chr7.2:3681307-3681326 | None:intergenic | 40.0% | |
| ACAAGCTGAAGGATCAGAAA+TGG | - | chr7.2:3681374-3681393 | MS.gene29330:intron | 40.0% | |
| ACTGGAAGAAGGAACTGTAA+GGG | - | chr7.2:3679211-3679230 | MS.gene29330:intron | 40.0% | |
| AGAAAGATGTGACTGGAAGA+AGG | - | chr7.2:3679200-3679219 | MS.gene29330:intron | 40.0% | |
| AGATGACATCAAAGGGACTT+GGG | - | chr7.2:3678982-3679001 | MS.gene29330:intron | 40.0% | |
| AGCTCACCATAATTGTACTC+AGG | - | chr7.2:3681275-3681294 | MS.gene29330:CDS | 40.0% | |
| AGGAACTGTAAGGGAAACAT+GGG | - | chr7.2:3679220-3679239 | MS.gene29330:intron | 40.0% | |
| AGTAGAGGAGATGACATCAA+AGG | - | chr7.2:3678974-3678993 | MS.gene29330:intron | 40.0% | |
| ATATGTCACAAATGTGCCCA+TGG | + | chr7.2:3681347-3681366 | None:intergenic | 40.0% | |
| ATATTCAGATGGGTGATTGC+AGG | - | chr7.2:3681678-3681697 | MS.gene29330:intron | 40.0% | |
| CAAGCTGAAGGATCAGAAAT+GGG | - | chr7.2:3681375-3681394 | MS.gene29330:intron | 40.0% | |
| CAAGGACTTGAACCAAAACA+AGG | - | chr7.2:3680627-3680646 | MS.gene29330:intron | 40.0% | |
| CACAATTAGCAGAAGATAGG+GGG | - | chr7.2:3680045-3680064 | MS.gene29330:intron | 40.0% | |
| CCAAAACTGGTGCATATTAC+TGG | - | chr7.2:3680710-3680729 | MS.gene29330:intron | 40.0% | |
| CCTCAAATACTTCTCTGTAC+CGG | - | chr7.2:3681480-3681499 | MS.gene29330:intron | 40.0% | |
| CGCACAATTAGCAGAAGATA+GGG | - | chr7.2:3680043-3680062 | MS.gene29330:intron | 40.0% | |
| CTAAGTACGAACTGGATCAT+GGG | + | chr7.2:3677938-3677957 | None:intergenic | 40.0% | |
| CTATACTCAGTTCACTTCTC+TGG | + | chr7.2:3680395-3680414 | None:intergenic | 40.0% | |
| CTGTCGAGTATCTCCAATAT+CGG | + | chr7.2:3679019-3679038 | None:intergenic | 40.0% | |
| GAAGAAGGAAAGATGATGCA+AGG | - | chr7.2:3678077-3678096 | MS.gene29330:CDS | 40.0% | |
| GAAGTGAACTGAGTATAGTC+AGG | - | chr7.2:3680397-3680416 | MS.gene29330:intron | 40.0% | |
| GAGCTGGAATAAAGACAAAC+AGG | + | chr7.2:3681543-3681562 | None:intergenic | 40.0% | |
| GCACAATTAGCAGAAGATAG+GGG | - | chr7.2:3680044-3680063 | MS.gene29330:intron | 40.0% | |
| GGGAAAAGAGGCAAAAGATA+GGG | - | chr7.2:3679891-3679910 | MS.gene29330:intron | 40.0% | |
| GTAGAGGAGATGACATCAAA+GGG | - | chr7.2:3678975-3678994 | MS.gene29330:intron | 40.0% | |
| GTCTACTTACAAATCAGGGT+TGG | + | chr7.2:3679556-3679575 | None:intergenic | 40.0% | |
| GTTCAGGGAGATAACAACAT+AGG | - | chr7.2:3678686-3678705 | MS.gene29330:intron | 40.0% | |
| GTTCATGTCAGCAACATTTG+TGG | - | chr7.2:3681710-3681729 | MS.gene29330:intron | 40.0% | |
| GTTTGTCTTTATTCCAGCTC+TGG | - | chr7.2:3681543-3681562 | MS.gene29330:intron | 40.0% | |
| TCAGGGCTTAAGTAACTTTG+TGG | - | chr7.2:3680415-3680434 | MS.gene29330:intron | 40.0% | |
| TCCACTCCTAAAAGCTTGAA+TGG | - | chr7.2:3680802-3680821 | MS.gene29330:intron | 40.0% | |
| TCGCACAATTAGCAGAAGAT+AGG | - | chr7.2:3680042-3680061 | MS.gene29330:intron | 40.0% | |
| TGTGGATCTGAAGAAGAAGA+AGG | - | chr7.2:3678062-3678081 | MS.gene29330:CDS | 40.0% | |
| ! | CACCGTGAAGAAGTATATCT+CGG | - | chr7.2:3680212-3680231 | MS.gene29330:CDS | 40.0% |
| ! | CACTTGTAGTCTTTTCTGCT+TGG | - | chr7.2:3680849-3680868 | MS.gene29330:intron | 40.0% |
| ! | CCAGTAATATGCACCAGTTT+TGG | + | chr7.2:3680713-3680732 | None:intergenic | 40.0% |
| ! | CCGTAACCATTCAAGCTTTT+AGG | + | chr7.2:3680811-3680830 | None:intergenic | 40.0% |
| ! | TGGCATTTTTCTGTTGCAGT+TGG | - | chr7.2:3681791-3681810 | MS.gene29330:intron | 40.0% |
| ! | TTATTTCTCACAAGCTCTCC+AGG | + | chr7.2:3678842-3678861 | None:intergenic | 40.0% |
| !! | ACCATTCAAGCTTTTAGGAG+TGG | + | chr7.2:3680806-3680825 | None:intergenic | 40.0% |
| !! | AGGATTTTGACGATGGTCTA+TGG | + | chr7.2:3680756-3680775 | None:intergenic | 40.0% |
| !! | ATACTTCGGATGTTCTAGAG+AGG | - | chr7.2:3679478-3679497 | MS.gene29330:intron | 40.0% |
| !! | GGATTTTGACGATGGTCTAT+GGG | + | chr7.2:3680755-3680774 | None:intergenic | 40.0% |
| !! | TCCTTTTAGGGATTCAAACC+GGG | - | chr7.2:3680665-3680684 | MS.gene29330:intron | 40.0% |
| !!! | GGTTTTAGTTCTGCCGATAT+TGG | - | chr7.2:3679003-3679022 | MS.gene29330:intron | 40.0% |
| !!! | GTTGCTTTTGGTCCTTGTTT+TGG | + | chr7.2:3680642-3680661 | None:intergenic | 40.0% |
| !!! | TGGTCTGCTGGTTTGTTTTA+TGG | - | chr7.2:3681421-3681440 | MS.gene29330:intron | 40.0% |
| AATAGTTGAACAAGTCCCGC+CGG | + | chr7.2:3681502-3681521 | None:intergenic | 45.0% | |
| AGACTGTTTGGGAGAGCTTA+TGG | + | chr7.2:3678899-3678918 | None:intergenic | 45.0% | |
| AGGTGGTTCTTCATTGTTGC+TGG | - | chr7.2:3681771-3681790 | MS.gene29330:intron | 45.0% | |
| ATATCATGTCGGCAGGTGAA+AGG | - | chr7.2:3681751-3681770 | MS.gene29330:intron | 45.0% | |
| ATTTCCTCCATCACAAGCTC+AGG | - | chr7.2:3678439-3678458 | MS.gene29330:CDS | 45.0% | |
| ATTTGTGGCACTTAACCTCC+GGG | - | chr7.2:3681725-3681744 | MS.gene29330:intron | 45.0% | |
| CAAACCGGGTAGAATGTTGT+AGG | - | chr7.2:3680679-3680698 | MS.gene29330:intron | 45.0% | |
| CAAATACTTCTCTGTACCGG+CGG | - | chr7.2:3681483-3681502 | MS.gene29330:intron | 45.0% | |
| CATTTGTGGCACTTAACCTC+CGG | - | chr7.2:3681724-3681743 | MS.gene29330:intron | 45.0% | |
| CTCTCCCAAACAGTCTTACA+AGG | - | chr7.2:3678903-3678922 | MS.gene29330:intron | 45.0% | |
| GAAGGAAAGATGATGCAAGG+AGG | - | chr7.2:3678080-3678099 | MS.gene29330:CDS | 45.0% | |
| GACTGGAAGAAGGAACTGTA+AGG | - | chr7.2:3679210-3679229 | MS.gene29330:intron | 45.0% | |
| GACTGTTTGGGAGAGCTTAT+GGG | + | chr7.2:3678898-3678917 | None:intergenic | 45.0% | |
| GAGATGACATCAAAGGGACT+TGG | - | chr7.2:3678981-3679000 | MS.gene29330:intron | 45.0% | |
| GATCCCTACAACATTCTACC+CGG | + | chr7.2:3680686-3680705 | None:intergenic | 45.0% | |
| GCTAAGTACGAACTGGATCA+TGG | + | chr7.2:3677939-3677958 | None:intergenic | 45.0% | |
| GGGGAAAAGAGGCAAAAGAT+AGG | - | chr7.2:3679890-3679909 | MS.gene29330:intron | 45.0% | |
| GTAGGGATCAAAGCCAAAAC+TGG | - | chr7.2:3680697-3680716 | MS.gene29330:intron | 45.0% | |
| GTGTTTGTCCATTGTCCCAT+TGG | - | chr7.2:3681653-3681672 | MS.gene29330:intron | 45.0% | |
| GTTCGTACCAGTGAACTTGA+CGG | + | chr7.2:3678273-3678292 | None:intergenic | 45.0% | |
| TACTCAGGTATGGACCATTC+TGG | - | chr7.2:3681290-3681309 | MS.gene29330:CDS | 45.0% | |
| TCATCAGAAGAACCAGATGC+AGG | + | chr7.2:3679393-3679412 | None:intergenic | 45.0% | |
| TCTTCTGATGAACCTCAGCA+GGG | - | chr7.2:3679402-3679421 | MS.gene29330:intron | 45.0% | |
| TTCACGGTGACTAGCAATGA+TGG | + | chr7.2:3678638-3678657 | None:intergenic | 45.0% | |
| TTCTTCTGATGAACCTCAGC+AGG | - | chr7.2:3679401-3679420 | MS.gene29330:intron | 45.0% | |
| TTTCCTCCATCACAAGCTCA+GGG | - | chr7.2:3678440-3678459 | MS.gene29330:CDS | 45.0% | |
| TTTCGTCGCTAAGTACGAAC+TGG | + | chr7.2:3677946-3677965 | None:intergenic | 45.0% | |
| ! | AAATACTTCTCTGTACCGGC+GGG | - | chr7.2:3681484-3681503 | MS.gene29330:intron | 45.0% |
| ! | ACCCGGTTTGAATCCCTAAA+AGG | + | chr7.2:3680669-3680688 | None:intergenic | 45.0% |
| ! | TGCTTACATTTGAGACCGGA+GGG | + | chr7.2:3680992-3681011 | None:intergenic | 45.0% |
| ! | TTGCTTACATTTGAGACCGG+AGG | + | chr7.2:3680993-3681012 | None:intergenic | 45.0% |
| !! | CCGGTACAGAGAAGTATTTG+AGG | + | chr7.2:3681483-3681502 | None:intergenic | 45.0% |
| !! | GCCGTTTTCATAAGCTATCC+TGG | - | chr7.2:3678821-3678840 | MS.gene29330:intron | 45.0% |
| AACTGGTGAGTTGTGACCAC+TGG | - | chr7.2:3679710-3679729 | MS.gene29330:intron | 50.0% | |
| ATACCATCTGCATCTCGAGG+TGG | + | chr7.2:3678488-3678507 | None:intergenic | 50.0% | |
| ATCTTCCCCTGAGCTTGTGA+TGG | + | chr7.2:3678449-3678468 | None:intergenic | 50.0% | |
| CTACTTGCGGAATCCGACAA+TGG | + | chr7.2:3678360-3678379 | None:intergenic | 50.0% | |
| GAGAAGCAACTTACCAGAGC+TGG | + | chr7.2:3681559-3681578 | None:intergenic | 50.0% | |
| GGAAAGATGATGCAAGGAGG+AGG | - | chr7.2:3678083-3678102 | MS.gene29330:CDS | 50.0% | |
| TTCCTCCATCACAAGCTCAG+GGG | - | chr7.2:3678441-3678460 | MS.gene29330:CDS | 50.0% | |
| ! | AGTCTTTTCTGCTTGGCTGC+TGG | - | chr7.2:3680856-3680875 | MS.gene29330:intron | 50.0% |
| ! | GACCGGAGGGAGTACAAATT+AGG | + | chr7.2:3680979-3680998 | None:intergenic | 50.0% |
| ! | GGCCTAATTTGTACTCCCTC+CGG | - | chr7.2:3680974-3680993 | MS.gene29330:intron | 50.0% |
| !! | AATCTGGTGACTTGGTCTGC+TGG | - | chr7.2:3681409-3681428 | MS.gene29330:intron | 50.0% |
| ATGAACCTCAGCAGGGTGGT+TGG | - | chr7.2:3679409-3679428 | MS.gene29330:intron | 55.0% | |
| CAAGCTCAGGGGAAGATCAC+CGG | - | chr7.2:3678452-3678471 | MS.gene29330:CDS | 55.0% | |
| CAGATGGGTGATTGCAGGTG+TGG | - | chr7.2:3681683-3681702 | MS.gene29330:intron | 55.0% | |
| CCAGTGAACTTGACGGTGAC+CGG | + | chr7.2:3678266-3678285 | None:intergenic | 55.0% | |
| CCGGCTCACCGCCAAATAAA+GGG | + | chr7.2:3680158-3680177 | None:intergenic | 55.0% | |
| CCTCCGGGCACATATCATGT+CGG | - | chr7.2:3681740-3681759 | MS.gene29330:intron | 55.0% | |
| CTGCCGACATGATATGTGCC+CGG | + | chr7.2:3681746-3681765 | None:intergenic | 55.0% | |
| GGAAGATCACCGGTGGTTCT+AGG | - | chr7.2:3678462-3678481 | MS.gene29330:intron | 55.0% | |
| TCATGTCGGCAGGTGAAAGG+TGG | - | chr7.2:3681754-3681773 | MS.gene29330:intron | 55.0% | |
| TCTGATGAACCTCAGCAGGG+TGG | - | chr7.2:3679405-3679424 | MS.gene29330:intron | 55.0% | |
| TTCCCCTGAGCTTGTGATGG+AGG | + | chr7.2:3678446-3678465 | None:intergenic | 55.0% | |
| ! | CCCTTTATTTGGCGGTGAGC+CGG | - | chr7.2:3680155-3680174 | MS.gene29330:intron | 55.0% |
| ! | CCTTTATTTGGCGGTGAGCC+GGG | - | chr7.2:3680156-3680175 | MS.gene29330:intron | 55.0% |
| ! | CTTTATTTGGCGGTGAGCCG+GGG | - | chr7.2:3680157-3680176 | MS.gene29330:intron | 55.0% |
| AACTTGACGGTGACCGGTGG+TGG | + | chr7.2:3678260-3678279 | None:intergenic | 60.0% | |
| AGGCCACCTCGAGATGCAGA+TGG | - | chr7.2:3678482-3678501 | MS.gene29330:intron | 60.0% | |
| CCCGGCTCACCGCCAAATAA+AGG | + | chr7.2:3680159-3680178 | None:intergenic | 60.0% | |
| CCGACATGATATGTGCCCGG+AGG | + | chr7.2:3681743-3681762 | None:intergenic | 60.0% | |
| CCGGTCACCGTCAAGTTCAC+TGG | - | chr7.2:3678263-3678282 | MS.gene29330:CDS | 60.0% | |
| CGGGCACATATCATGTCGGC+AGG | - | chr7.2:3681744-3681763 | MS.gene29330:intron | 60.0% | |
| GGGTGATTGCAGGTGTGGCA+GGG | - | chr7.2:3681688-3681707 | MS.gene29330:intron | 60.0% | |
| GTGAACTTGACGGTGACCGG+TGG | + | chr7.2:3678263-3678282 | None:intergenic | 60.0% | |
| TCGAGGTGGCCTAGAACCAC+CGG | + | chr7.2:3678474-3678493 | None:intergenic | 60.0% | |
| TGGGTGATTGCAGGTGTGGC+AGG | - | chr7.2:3681687-3681706 | MS.gene29330:intron | 60.0% | |
| !! | CTCAGCAGGGTGGTTGGCTT+CGG | - | chr7.2:3679415-3679434 | MS.gene29330:intron | 60.0% |
| !! | GACCGGTGGTGGATCTGGAA+CGG | + | chr7.2:3678249-3678268 | None:intergenic | 60.0% |
| CGAAGCCAACCACCCTGCTG+AGG | + | chr7.2:3679417-3679436 | None:intergenic | 65.0% | |
| GCTCAGGGGAAGATCACCGG+TGG | - | chr7.2:3678455-3678474 | MS.gene29330:CDS | 65.0% | |
| GGCCGTTCCAGATCCACCAC+CGG | - | chr7.2:3678244-3678263 | MS.gene29330:CDS | 65.0% | |
| !! | ACGGTGACCGGTGGTGGATC+TGG | + | chr7.2:3678254-3678273 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 3677914 | 3681860 | 3677914 | ID=MS.gene29330 |
| chr7.2 | mRNA | 3677914 | 3681860 | 3677914 | ID=MS.gene29330.t1;Parent=MS.gene29330 |
| chr7.2 | exon | 3681846 | 3681860 | 3681846 | ID=MS.gene29330.t1.exon1;Parent=MS.gene29330.t1 |
| chr7.2 | CDS | 3681846 | 3681860 | 3681846 | ID=cds.MS.gene29330.t1;Parent=MS.gene29330.t1 |
| chr7.2 | exon | 3681490 | 3681529 | 3681490 | ID=MS.gene29330.t1.exon2;Parent=MS.gene29330.t1 |
| chr7.2 | CDS | 3681490 | 3681529 | 3681490 | ID=cds.MS.gene29330.t1;Parent=MS.gene29330.t1 |
| chr7.2 | exon | 3681271 | 3681351 | 3681271 | ID=MS.gene29330.t1.exon3;Parent=MS.gene29330.t1 |
| chr7.2 | CDS | 3681271 | 3681351 | 3681271 | ID=cds.MS.gene29330.t1;Parent=MS.gene29330.t1 |
| chr7.2 | exon | 3680209 | 3680398 | 3680209 | ID=MS.gene29330.t1.exon4;Parent=MS.gene29330.t1 |
| chr7.2 | CDS | 3680209 | 3680398 | 3680209 | ID=cds.MS.gene29330.t1;Parent=MS.gene29330.t1 |
| chr7.2 | exon | 3678210 | 3678477 | 3678210 | ID=MS.gene29330.t1.exon5;Parent=MS.gene29330.t1 |
| chr7.2 | CDS | 3678210 | 3678477 | 3678210 | ID=cds.MS.gene29330.t1;Parent=MS.gene29330.t1 |
| chr7.2 | exon | 3677914 | 3678120 | 3677914 | ID=MS.gene29330.t1.exon6;Parent=MS.gene29330.t1 |
| chr7.2 | CDS | 3677914 | 3678120 | 3677914 | ID=cds.MS.gene29330.t1;Parent=MS.gene29330.t1 |
| Gene Sequence |
| Protein sequence |
