Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29339.t1 | RHN49279.1 | 93.6 | 450 | 25 | 1 | 4 | 453 | 2 | 447 | 3.20E-252 | 880.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29339.t1 | Q9SVS0 | 67.0 | 415 | 131 | 4 | 46 | 454 | 58 | 472 | 2.2e-169 | 596.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29339.t1 | A0A396H7P7 | 93.6 | 450 | 25 | 1 | 4 | 453 | 2 | 447 | 2.3e-252 | 880.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene29339 | 0.806118 | 9.61E-50 | -1.69E-46 |
| MS.gene049351 | MS.gene29339 | 0.80338 | 3.58E-49 | -1.69E-46 |
| MS.gene049427 | MS.gene29339 | 0.816065 | 6.70E-52 | -1.69E-46 |
| MS.gene050812 | MS.gene29339 | 0.811796 | 5.85E-51 | -1.69E-46 |
| MS.gene051582 | MS.gene29339 | 0.819279 | 1.26E-52 | -1.69E-46 |
| MS.gene052326 | MS.gene29339 | 0.807304 | 5.40E-50 | -1.69E-46 |
| MS.gene053322 | MS.gene29339 | 0.812141 | 4.92E-51 | -1.69E-46 |
| MS.gene055412 | MS.gene29339 | 0.820517 | 6.58E-53 | -1.69E-46 |
| MS.gene055428 | MS.gene29339 | 0.80101 | 1.10E-48 | -1.69E-46 |
| MS.gene057011 | MS.gene29339 | 0.835257 | 1.86E-56 | -1.69E-46 |
| MS.gene058660 | MS.gene29339 | 0.802283 | 6.04E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29339.t1 | MTR_7g113450 | 93.333 | 450 | 26 | 1 | 4 | 453 | 2 | 447 | 0.0 | 872 |
| MS.gene29339.t1 | MTR_2g022770 | 81.184 | 473 | 71 | 2 | 1 | 455 | 1 | 473 | 0.0 | 796 |
| MS.gene29339.t1 | MTR_7g113450 | 93.092 | 304 | 21 | 0 | 4 | 307 | 2 | 305 | 0.0 | 588 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29339.t1 | AT4G21770 | 66.747 | 415 | 132 | 4 | 46 | 454 | 58 | 472 | 0.0 | 594 |
| MS.gene29339.t1 | AT4G21770 | 68.702 | 393 | 119 | 3 | 66 | 454 | 1 | 393 | 0.0 | 579 |
Find 109 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCTCAACAAGCATGAATT+TGG | 0.218911 | 7.2:+3779747 | MS.gene29339:CDS |
| AAGAAACGGCTGTAATAAAT+TGG | 0.246669 | 7.2:+3783892 | MS.gene29339:CDS |
| CCGTCTTTCATTGCAAAATT+CGG | 0.253470 | 7.2:+3781166 | MS.gene29339:CDS |
| GTTGCAGATCTGATTCAATT+TGG | 0.281393 | 7.2:+3780052 | MS.gene29339:CDS |
| ACAACTAAGTGTTCAATTCT+TGG | 0.294603 | 7.2:-3779870 | None:intergenic |
| CTGTCGTAGCCTCGGCGTTC+CGG | 0.315206 | 7.2:+3779689 | MS.gene29339:CDS |
| TTCAAGCTTGTCAAATTTCA+TGG | 0.315468 | 7.2:+3783955 | MS.gene29339:CDS |
| TGTAAAATCAACCTTCTTAC+TGG | 0.321032 | 7.2:+3782548 | MS.gene29339:CDS |
| CGTCTTTCATTGCAAAATTC+GGG | 0.339193 | 7.2:+3781167 | MS.gene29339:CDS |
| TACATAGTATCACCAATTAT+TGG | 0.340825 | 7.2:-3783783 | None:intergenic |
| CCGTGCAGTTATCAATTTGA+TGG | 0.341065 | 7.2:-3781034 | None:intergenic |
| ACCTTTGCAACTCGTGCCTT+GGG | 0.344438 | 7.2:+3780987 | MS.gene29339:CDS |
| ACAATACATCTGTAAAGCTT+TGG | 0.353276 | 7.2:+3779914 | MS.gene29339:CDS |
| GAGGTGTTTGTTAAGTGATA+TGG | 0.358711 | 7.2:-3779730 | None:intergenic |
| GCTTGCAAGGCACCAATAAT+TGG | 0.358878 | 7.2:+3783771 | MS.gene29339:CDS |
| AATCCTGGACTTAATCCATT+TGG | 0.359578 | 7.2:+3783834 | MS.gene29339:CDS |
| ACAGAGCTGGTTTGCCTTGG+TGG | 0.361729 | 7.2:+3783997 | MS.gene29339:CDS |
| GTAGCGGTTGGAGGAGGTTC+CGG | 0.372880 | 7.2:-3780100 | None:intergenic |
| ATGAAATTTGACAAGCTTGA+AGG | 0.384279 | 7.2:-3783953 | None:intergenic |
| AACCTTTGCAACTCGTGCCT+TGG | 0.385948 | 7.2:+3780986 | MS.gene29339:CDS |
| TTACAGATGTATTGTAAAAC+AGG | 0.388608 | 7.2:-3779906 | None:intergenic |
| ACAACTTTCTTCAATGTTGC+CGG | 0.392445 | 7.2:-3780961 | None:intergenic |
| GCAGCTTCTCCTTTACCAAT+TGG | 0.403389 | 7.2:+3781572 | MS.gene29339:CDS |
| CAGCTGCCGCGGAACAAGAT+TGG | 0.406189 | 7.2:-3779669 | None:intergenic |
| TGCACTCGCAGGTAAGTTCC+TGG | 0.426326 | 7.2:-3780256 | None:intergenic |
| CAAAGAAGCAACTGAACCAT+TGG | 0.428367 | 7.2:+3780144 | MS.gene29339:CDS |
| ATTTACCTAGGATAACGCTT+GGG | 0.431357 | 7.2:-3780286 | None:intergenic |
| AGTCGAGGAGCCGTGTTAGT+AGG | 0.435108 | 7.2:-3781617 | None:intergenic |
| TTGAACAACAATAGCTGGCC+AGG | 0.441571 | 7.2:-3782471 | None:intergenic |
| AGGTGTTTGTTAAGTGATAT+GGG | 0.442132 | 7.2:-3779729 | None:intergenic |
| ATGAATTTGGTTGGTGTTGT+CGG | 0.448484 | 7.2:+3779760 | MS.gene29339:CDS |
| GAAGCAATCGATCATACTTC+GGG | 0.456347 | 7.2:-3779824 | None:intergenic |
| CGCGGCAGCTGTCGTAGCCT+CGG | 0.459951 | 7.2:+3779681 | MS.gene29339:CDS |
| TTTACAGAGCTGGTTTGCCT+TGG | 0.460289 | 7.2:+3783994 | MS.gene29339:CDS |
| AATATTGTGTTGAAGATTGT+GGG | 0.461791 | 7.2:+3782498 | MS.gene29339:CDS |
| TAGCCTCGGCGTTCCGGATG+CGG | 0.465407 | 7.2:+3779695 | MS.gene29339:CDS |
| AGCTCAATTTGCTGCTTGCA+AGG | 0.465415 | 7.2:+3783758 | MS.gene29339:CDS |
| TTGATAACTGCACGGAAGGC+TGG | 0.465999 | 7.2:+3781042 | MS.gene29339:CDS |
| TTAGGTGCTATGAGATTGAC+TGG | 0.466195 | 7.2:+3780392 | MS.gene29339:intron |
| TTTGATGGGTAGTTATCAAA+GGG | 0.466598 | 7.2:-3781019 | None:intergenic |
| ATTTATGTGTAGCGTAGTAT+TGG | 0.471915 | 7.2:+3781122 | MS.gene29339:intron |
| TCTTACTGGTCGAACTCATC+AGG | 0.474622 | 7.2:+3782562 | MS.gene29339:CDS |
| GGAACCGCACTCGCCGCATC+CGG | 0.475158 | 7.2:-3779708 | None:intergenic |
| ATTTGCTCTGCAGTAGCGGT+TGG | 0.475754 | 7.2:-3780112 | None:intergenic |
| TGCTCTGCAGTAGCGGTTGG+AGG | 0.479465 | 7.2:-3780109 | None:intergenic |
| AAAGAGCCTAGTGTTGCAAT+TGG | 0.490916 | 7.2:+3783930 | MS.gene29339:CDS |
| ATTGACTGCAGATGGTATCA+AGG | 0.491296 | 7.2:+3782403 | MS.gene29339:intron |
| GATGAATACATTTACAGAGC+TGG | 0.491345 | 7.2:+3783984 | MS.gene29339:CDS |
| ATGAGATTGACTGGAGATCA+AGG | 0.491460 | 7.2:+3780401 | MS.gene29339:CDS |
| TTTCCAAATGGATTAAGTCC+AGG | 0.503496 | 7.2:-3783837 | None:intergenic |
| TAGTGCTTAATGATTCCAAT+TGG | 0.508620 | 7.2:-3781587 | None:intergenic |
| TCATCTTGAACAACAATAGC+TGG | 0.509716 | 7.2:-3782476 | None:intergenic |
| TGGAATGCAGAAAGATTCCC+TGG | 0.510667 | 7.2:+3782453 | MS.gene29339:CDS |
| TATTTGTCATCTTGAGGTCA+TGG | 0.513587 | 7.2:+3782433 | MS.gene29339:CDS |
| TAAGATGGGTTCGGTGGCGG+TGG | 0.514367 | 7.2:+3779644 | None:intergenic |
| ATCATCTCTGCAATTGCAGC+AGG | 0.520543 | 7.2:-3783810 | None:intergenic |
| ATTTGATGGGTAGTTATCAA+AGG | 0.524439 | 7.2:-3781020 | None:intergenic |
| CGTGCAGTTATCAATTTGAT+GGG | 0.526284 | 7.2:-3781033 | None:intergenic |
| AGTAAAAGATAAGATGGGTT+CGG | 0.528067 | 7.2:+3779635 | None:intergenic |
| TCAAGCTTGTCAAATTTCAT+GGG | 0.528140 | 7.2:+3783956 | MS.gene29339:CDS |
| CTTGGCGGAGATTTGTGTGT+AGG | 0.530094 | 7.2:-3779852 | None:intergenic |
| TTAATGATTCCAATTGGTAA+AGG | 0.533290 | 7.2:-3781581 | None:intergenic |
| GGAAGCAATCGATCATACTT+CGG | 0.533740 | 7.2:-3779825 | None:intergenic |
| ATTGCAGAGATGATTAATCC+TGG | 0.537124 | 7.2:+3783819 | MS.gene29339:CDS |
| TCTGCAGTAGCGGTTGGAGG+AGG | 0.537831 | 7.2:-3780106 | None:intergenic |
| GAGCTGGTTTGCCTTGGTGG+AGG | 0.539193 | 7.2:+3784000 | MS.gene29339:CDS |
| GTAGCTTACTGTTTCACTGA+TGG | 0.541763 | 7.2:-3779802 | None:intergenic |
| GAATATTGTGTTGAAGATTG+TGG | 0.542188 | 7.2:+3782497 | MS.gene29339:CDS |
| TCTAATTTGCTCTGCAGTAG+CGG | 0.543133 | 7.2:-3780116 | None:intergenic |
| AGATAAGATGGGTTCGGTGG+CGG | 0.545265 | 7.2:+3779641 | None:intergenic |
| TGGGGTGCACGTGCACTCGC+AGG | 0.546368 | 7.2:-3780267 | None:intergenic |
| GAATTTGGCACTTACAAATG+AGG | 0.550102 | 7.2:-3779942 | None:intergenic |
| TGTGTAGCGTAGTATTGGCT+AGG | 0.552185 | 7.2:+3781127 | MS.gene29339:intron |
| AATTTACCTAGGATAACGCT+TGG | 0.552883 | 7.2:-3780287 | None:intergenic |
| CAAATTGATAACTGCACGGA+AGG | 0.558184 | 7.2:+3781038 | MS.gene29339:CDS |
| CGAGGCTACGACAGCTGCCG+CGG | 0.558845 | 7.2:-3779680 | None:intergenic |
| CGTTCCGGATGCGGCGAGTG+CGG | 0.562174 | 7.2:+3779704 | MS.gene29339:CDS |
| CACTTAGTTGTTTCACGAGG+AGG | 0.563811 | 7.2:+3779882 | MS.gene29339:CDS |
| ACTAAGTGTTCAATTCTTGG+CGG | 0.566453 | 7.2:-3779867 | None:intergenic |
| TCCCAAGGCACGAGTTGCAA+AGG | 0.567562 | 7.2:-3780988 | None:intergenic |
| TGAAGGCCAATTGCAACACT+AGG | 0.568515 | 7.2:-3783936 | None:intergenic |
| AACCAAATTCATGCTTGTTG+AGG | 0.571349 | 7.2:-3779749 | None:intergenic |
| ATGGCATATTTGTCATCTTG+AGG | 0.572439 | 7.2:+3782427 | MS.gene29339:CDS |
| TCAACAAGCATGAATTTGGT+TGG | 0.576730 | 7.2:+3779751 | MS.gene29339:CDS |
| TTGACTGCAGATGGTATCAA+GGG | 0.577829 | 7.2:+3782404 | MS.gene29339:intron |
| GATGAGTTCGACCAGTAAGA+AGG | 0.590412 | 7.2:-3782559 | None:intergenic |
| TTACATACAGAAGTACCAGC+AGG | 0.592818 | 7.2:-3780463 | None:intergenic |
| GTGAATCAGTTTGTTGAACC+AGG | 0.597573 | 7.2:+3780238 | MS.gene29339:CDS |
| GCTCCTCGACTTATTTCTGA+AGG | 0.598052 | 7.2:+3781629 | MS.gene29339:CDS |
| CTGCAGATGGTATCAAGGGA+TGG | 0.598332 | 7.2:+3782408 | MS.gene29339:intron |
| TGCACCCCAAGCGTTATCCT+AGG | 0.608599 | 7.2:+3780281 | MS.gene29339:CDS |
| CTATATGCGTCCTACTAACA+CGG | 0.608861 | 7.2:+3781607 | MS.gene29339:CDS |
| GGTTAGGTAGGGGAAACTAC+CGG | 0.618843 | 7.2:+3780942 | MS.gene29339:intron |
| TGAACAACAATAGCTGGCCA+GGG | 0.627097 | 7.2:-3782470 | None:intergenic |
| CAAAGGGGTTGTCAATCCCA+AGG | 0.627297 | 7.2:-3781003 | None:intergenic |
| GTGGCGCCAATCTTGTTCCG+CGG | 0.631844 | 7.2:+3779663 | MS.gene29339:CDS |
| TTTACCTAGGATAACGCTTG+GGG | 0.635968 | 7.2:-3780285 | None:intergenic |
| GAGATCAAGGATCATAGCTG+TGG | 0.639469 | 7.2:+3780414 | MS.gene29339:CDS |
| ATCAAGGATCATAGCTGTGG+AGG | 0.645787 | 7.2:+3780417 | MS.gene29339:CDS |
| TCGCCGCATCCGGAACGCCG+AGG | 0.647925 | 7.2:-3779698 | None:intergenic |
| CCATCAAATTGATAACTGCA+CGG | 0.652336 | 7.2:+3781034 | MS.gene29339:CDS |
| AAAAGATAAGATGGGTTCGG+TGG | 0.652380 | 7.2:+3779638 | None:intergenic |
| ACTGATTCACATCAGTTACA+CGG | 0.683807 | 7.2:-3780225 | None:intergenic |
| GGAGATTTGTGTGTAGGACA+TGG | 0.688633 | 7.2:-3779846 | None:intergenic |
| ATAAATTGGATTGCACAACA+CGG | 0.689490 | 7.2:+3783906 | MS.gene29339:CDS |
| TTGATGGGTAGTTATCAAAG+GGG | 0.694436 | 7.2:-3781018 | None:intergenic |
| TTACCTTCAGAAATAAGTCG+AGG | 0.695194 | 7.2:-3781632 | None:intergenic |
| ATTGTGTTGAAGATTGTGGG+TGG | 0.705277 | 7.2:+3782501 | MS.gene29339:CDS |
| GAACACTTAGTTGTTTCACG+AGG | 0.728290 | 7.2:+3779879 | MS.gene29339:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGATTAAATAAAATTTGAAT+AGG | + | chr7.2:3782223-3782242 | MS.gene29339:intron | 10.0% |
| !! | ATAATCAGATAAAAGAAATA+AGG | - | chr7.2:3783693-3783712 | None:intergenic | 15.0% |
| !!! | AATGTATTCTTTTCTATATT+TGG | + | chr7.2:3780921-3780940 | MS.gene29339:intron | 15.0% |
| !!! | CACTTAATTATTTTTTTTTC+AGG | + | chr7.2:3781517-3781536 | MS.gene29339:intron | 15.0% |
| !!! | TCAAATATTATAAGTTGATT+AGG | - | chr7.2:3782206-3782225 | None:intergenic | 15.0% |
| !!! | TGGTATTTTTAATGAAAAAT+AGG | + | chr7.2:3782979-3782998 | MS.gene29339:intron | 15.0% |
| !!! | TTTAAAGTTTAACTTTACAA+TGG | - | chr7.2:3782306-3782325 | None:intergenic | 15.0% |
| !! | AAATTCAAACAGTACATAAA+AGG | - | chr7.2:3782600-3782619 | None:intergenic | 20.0% |
| !! | AGCATTTACATGATATATAT+AGG | + | chr7.2:3783513-3783532 | MS.gene29339:intron | 20.0% |
| !! | ATATATAGGAGATACTATAT+AGG | + | chr7.2:3783527-3783546 | MS.gene29339:intron | 20.0% |
| !! | ATTTAAGTCACTATATCAAT+AGG | - | chr7.2:3783723-3783742 | None:intergenic | 20.0% |
| !! | CTTATCATATCATGTAAATA+GGG | - | chr7.2:3783594-3783613 | None:intergenic | 20.0% |
| !! | TACAACTAACTTAACTATAA+TGG | - | chr7.2:3781909-3781928 | None:intergenic | 20.0% |
| !! | TTTAACCATATGATTTAGTT+AGG | + | chr7.2:3782153-3782172 | MS.gene29339:intron | 20.0% |
| !! | TTTAAGTCACTATATCAATA+GGG | - | chr7.2:3783722-3783741 | None:intergenic | 20.0% |
| !!! | AAATATAGCTCAATTTTAGA+TGG | - | chr7.2:3782881-3782900 | None:intergenic | 20.0% |
| !!! | ATTCTTTTCTATATTTGGTT+AGG | + | chr7.2:3780926-3780945 | MS.gene29339:intron | 20.0% |
| !!! | CATAATGTTTTGAAATTTGT+GGG | - | chr7.2:3783114-3783133 | None:intergenic | 20.0% |
| !!! | GGCATTCTTAATATATTTTT+AGG | + | chr7.2:3780374-3780393 | MS.gene29339:intron | 20.0% |
| !!! | TAAAAGGGTATTAGAAAAAA+GGG | - | chr7.2:3783353-3783372 | None:intergenic | 20.0% |
| !!! | TACTTCACTATTTCATTTTA+AGG | - | chr7.2:3781697-3781716 | None:intergenic | 20.0% |
| !!! | TATTTCATTTTAAGGTTCTT+GGG | - | chr7.2:3781689-3781708 | None:intergenic | 20.0% |
| !!! | TCTTTATTGTATTTTCCAAA+TGG | - | chr7.2:3783852-3783871 | None:intergenic | 20.0% |
| !!! | TGATTGATAATTCTTATCTT+CGG | + | chr7.2:3782691-3782710 | MS.gene29339:intron | 20.0% |
| !!! | TTTAGTTTTATACTACATGA+AGG | + | chr7.2:3782110-3782129 | MS.gene29339:intron | 20.0% |
| ! | AAAAACCATTATGCTTGATA+AGG | - | chr7.2:3780662-3780681 | None:intergenic | 25.0% |
| ! | AAAGTTATTTATCCCTGTAT+AGG | + | chr7.2:3780511-3780530 | MS.gene29339:intron | 25.0% |
| ! | AATATTGTGTTGAAGATTGT+GGG | + | chr7.2:3782498-3782517 | MS.gene29339:CDS | 25.0% |
| ! | ACTAACATTCTAATTTACCT+AGG | - | chr7.2:3780301-3780320 | None:intergenic | 25.0% |
| ! | AGGTAAATTAGAATGTTAGT+TGG | + | chr7.2:3780301-3780320 | MS.gene29339:intron | 25.0% |
| ! | ATAGAAAAGAATACATTGCA+CGG | - | chr7.2:3780918-3780937 | None:intergenic | 25.0% |
| ! | ATGTATTATAAGCAACTTCT+AGG | + | chr7.2:3781741-3781760 | MS.gene29339:intron | 25.0% |
| ! | ATTCTATAAGAATCCTATAC+AGG | - | chr7.2:3780527-3780546 | None:intergenic | 25.0% |
| ! | ATTTGTGGGATAAATATTCT+CGG | - | chr7.2:3783100-3783119 | None:intergenic | 25.0% |
| ! | CACTTCTTGAAAAGAATAAA+AGG | + | chr7.2:3782034-3782053 | MS.gene29339:intron | 25.0% |
| ! | GCTTATCATATCATGTAAAT+AGG | - | chr7.2:3783595-3783614 | None:intergenic | 25.0% |
| ! | TAACAGTATAAGCTATGAAA+TGG | - | chr7.2:3781204-3781223 | None:intergenic | 25.0% |
| ! | TACATAGTATCACCAATTAT+TGG | - | chr7.2:3783786-3783805 | None:intergenic | 25.0% |
| ! | TCAAGAAGTGGAATATTTAA+AGG | - | chr7.2:3782024-3782043 | None:intergenic | 25.0% |
| ! | TGATAAAAATTGATTACGAG+TGG | - | chr7.2:3779988-3780007 | None:intergenic | 25.0% |
| ! | TGTATTATAAGCAACTTCTA+GGG | + | chr7.2:3781742-3781761 | MS.gene29339:intron | 25.0% |
| ! | TTAATGATTCCAATTGGTAA+AGG | - | chr7.2:3781584-3781603 | None:intergenic | 25.0% |
| ! | TTACAGATGTATTGTAAAAC+AGG | - | chr7.2:3779909-3779928 | None:intergenic | 25.0% |
| ! | TTAGAATGTTAGTTGGAAAT+TGG | + | chr7.2:3780308-3780327 | MS.gene29339:intron | 25.0% |
| ! | TTCTATAAGAATCCTATACA+GGG | - | chr7.2:3780526-3780545 | None:intergenic | 25.0% |
| ! | TTTCTATATTTGGTTAGGTA+GGG | + | chr7.2:3780931-3780950 | MS.gene29339:intron | 25.0% |
| !! | CATGAAATTAAAACCCATTT+TGG | + | chr7.2:3783035-3783054 | MS.gene29339:intron | 25.0% |
| !! | CTTTATAGTTTTTCCTTTGA+GGG | - | chr7.2:3780188-3780207 | None:intergenic | 25.0% |
| !! | GATTGATAATTCTTATCTTC+GGG | + | chr7.2:3782692-3782711 | MS.gene29339:intron | 25.0% |
| !! | TAAAATTCTAGCTAGGAATT+TGG | - | chr7.2:3779960-3779979 | None:intergenic | 25.0% |
| !! | TTTTCTATATTTGGTTAGGT+AGG | + | chr7.2:3780930-3780949 | MS.gene29339:intron | 25.0% |
| !! | TTTTTCTGAGTTCATATAGT+GGG | - | chr7.2:3780494-3780513 | None:intergenic | 25.0% |
| !!! | AATAGAGTTTGTTAGTACAA+CGG | - | chr7.2:3782843-3782862 | None:intergenic | 25.0% |
| !!! | CTATTTCATTTTAAGGTTCT+TGG | - | chr7.2:3781690-3781709 | None:intergenic | 25.0% |
| !!! | CTTTTATTCTTTTCAAGAAG+TGG | - | chr7.2:3782036-3782055 | None:intergenic | 25.0% |
| !!! | GCATAATGTTTTGAAATTTG+TGG | - | chr7.2:3783115-3783134 | None:intergenic | 25.0% |
| !!! | GTAAAAGGGTATTAGAAAAA+AGG | - | chr7.2:3783354-3783373 | None:intergenic | 25.0% |
| AAGAAACGGCTGTAATAAAT+TGG | + | chr7.2:3783892-3783911 | MS.gene29339:CDS | 30.0% | |
| ACAACTAAGTGTTCAATTCT+TGG | - | chr7.2:3779873-3779892 | None:intergenic | 30.0% | |
| ACAATACATCTGTAAAGCTT+TGG | + | chr7.2:3779914-3779933 | MS.gene29339:CDS | 30.0% | |
| ACTAACAAACTCTATTGTTC+TGG | + | chr7.2:3782847-3782866 | MS.gene29339:intron | 30.0% | |
| ATAAACTTCCAGAAAACGAA+TGG | - | chr7.2:3782951-3782970 | None:intergenic | 30.0% | |
| ATAAATTGGATTGCACAACA+CGG | + | chr7.2:3783906-3783925 | MS.gene29339:CDS | 30.0% | |
| ATAACAACATGATGTGTCAA+TGG | + | chr7.2:3782268-3782287 | MS.gene29339:intron | 30.0% | |
| ATACATTGCACGGAAAATTT+AGG | - | chr7.2:3780908-3780927 | None:intergenic | 30.0% | |
| ATATTTAAAGGAGAGAGGAT+AGG | - | chr7.2:3782012-3782031 | None:intergenic | 30.0% | |
| ATCAATGTAGAAATTGCCAT+TGG | - | chr7.2:3780621-3780640 | None:intergenic | 30.0% | |
| ATGAAATTTGACAAGCTTGA+AGG | - | chr7.2:3783956-3783975 | None:intergenic | 30.0% | |
| ATGGCAATTTCTACATTGAT+AGG | + | chr7.2:3780621-3780640 | MS.gene29339:intron | 30.0% | |
| ATTGTCAGAATTCTGAGTAA+GGG | - | chr7.2:3781873-3781892 | None:intergenic | 30.0% | |
| ATTTATGTGTAGCGTAGTAT+TGG | + | chr7.2:3781122-3781141 | MS.gene29339:intron | 30.0% | |
| CACAATATAAGACACTTATC+AGG | - | chr7.2:3782364-3782383 | None:intergenic | 30.0% | |
| CCTCAAAGGAAAAACTATAA+AGG | + | chr7.2:3780186-3780205 | MS.gene29339:CDS | 30.0% | |
| CTGATAAGTGTCTTATATTG+TGG | + | chr7.2:3782362-3782381 | MS.gene29339:intron | 30.0% | |
| CTGCAGTCAATAAATTTACA+GGG | - | chr7.2:3782394-3782413 | None:intergenic | 30.0% | |
| GAATATTGTGTTGAAGATTG+TGG | + | chr7.2:3782497-3782516 | MS.gene29339:CDS | 30.0% | |
| TAACAACATGATGTGTCAAT+GGG | + | chr7.2:3782269-3782288 | MS.gene29339:intron | 30.0% | |
| TAGTGCTTAATGATTCCAAT+TGG | - | chr7.2:3781590-3781609 | None:intergenic | 30.0% | |
| TCAAGCTTGTCAAATTTCAT+GGG | + | chr7.2:3783956-3783975 | MS.gene29339:CDS | 30.0% | |
| TCATGTTGTTATAGTACAAC+AGG | - | chr7.2:3782260-3782279 | None:intergenic | 30.0% | |
| TCTCAAGAATGATTGTTTGT+AGG | + | chr7.2:3780711-3780730 | MS.gene29339:intron | 30.0% | |
| TCTGCAGTCAATAAATTTAC+AGG | - | chr7.2:3782395-3782414 | None:intergenic | 30.0% | |
| TGCCAAACATTATCATATCA+TGG | - | chr7.2:3780358-3780377 | None:intergenic | 30.0% | |
| TGTAAAATCAACCTTCTTAC+TGG | + | chr7.2:3782548-3782567 | MS.gene29339:CDS | 30.0% | |
| TTACTCAGAATTCTGACAAT+CGG | + | chr7.2:3781873-3781892 | MS.gene29339:intron | 30.0% | |
| TTCAAGCTTGTCAAATTTCA+TGG | + | chr7.2:3783955-3783974 | MS.gene29339:CDS | 30.0% | |
| TTCTATATTTGGTTAGGTAG+GGG | + | chr7.2:3780932-3780951 | MS.gene29339:intron | 30.0% | |
| TTGTTATAGTACAACAGGTT+TGG | - | chr7.2:3782255-3782274 | None:intergenic | 30.0% | |
| ! | AGCCATGATATGATAATGTT+TGG | + | chr7.2:3780353-3780372 | MS.gene29339:intron | 30.0% |
| ! | AGGTGTTTGTTAAGTGATAT+GGG | - | chr7.2:3779732-3779751 | None:intergenic | 30.0% |
| ! | ATTTGATGGGTAGTTATCAA+AGG | - | chr7.2:3781023-3781042 | None:intergenic | 30.0% |
| ! | CCTTTATAGTTTTTCCTTTG+AGG | - | chr7.2:3780189-3780208 | None:intergenic | 30.0% |
| ! | CTGGAAGTTTATTTCTTCTA+TGG | + | chr7.2:3782959-3782978 | MS.gene29339:intron | 30.0% |
| ! | CTTTTTCTGAGTTCATATAG+TGG | - | chr7.2:3780495-3780514 | None:intergenic | 30.0% |
| ! | GGAAGAATAAAATTCTAGCT+AGG | - | chr7.2:3779967-3779986 | None:intergenic | 30.0% |
| ! | GTAAATTTATTGACTGCAGA+TGG | + | chr7.2:3782395-3782414 | MS.gene29339:intron | 30.0% |
| ! | TTTGATGGGTAGTTATCAAA+GGG | - | chr7.2:3781022-3781041 | None:intergenic | 30.0% |
| ! | TTTTCTGAGTTCATATAGTG+GGG | - | chr7.2:3780493-3780512 | None:intergenic | 30.0% |
| AAGCCTATCCAAAATCAATC+CGG | - | chr7.2:3783428-3783447 | None:intergenic | 35.0% | |
| AAGGTCCTTATCAAGCATAA+TGG | + | chr7.2:3780654-3780673 | MS.gene29339:intron | 35.0% | |
| AATCCTGGACTTAATCCATT+TGG | + | chr7.2:3783834-3783853 | MS.gene29339:CDS | 35.0% | |
| AATTTACCTAGGATAACGCT+TGG | - | chr7.2:3780290-3780309 | None:intergenic | 35.0% | |
| ACAACTTTCTTCAATGTTGC+CGG | - | chr7.2:3780964-3780983 | None:intergenic | 35.0% | |
| ACTAAGTGTTCAATTCTTGG+CGG | - | chr7.2:3779870-3779889 | None:intergenic | 35.0% | |
| AGACATTACACACACCAAAA+TGG | - | chr7.2:3783052-3783071 | None:intergenic | 35.0% | |
| ATAAGACTTAGTGTGTGTGT+TGG | - | chr7.2:3780019-3780038 | None:intergenic | 35.0% | |
| ATGCGCCTAACTAAATCATA+TGG | - | chr7.2:3782161-3782180 | None:intergenic | 35.0% | |
| ATGGCATATTTGTCATCTTG+AGG | + | chr7.2:3782427-3782446 | MS.gene29339:CDS | 35.0% | |
| ATTGCAGAGATGATTAATCC+TGG | + | chr7.2:3783819-3783838 | MS.gene29339:CDS | 35.0% | |
| ATTTACCTAGGATAACGCTT+GGG | - | chr7.2:3780289-3780308 | None:intergenic | 35.0% | |
| ATTTCTACATTGATAGGCGT+TGG | + | chr7.2:3780627-3780646 | MS.gene29339:intron | 35.0% | |
| CAAAACATTATGCACTCTAG+TGG | + | chr7.2:3783122-3783141 | MS.gene29339:intron | 35.0% | |
| CAGTGAGAGTGAAAAAGAAA+CGG | + | chr7.2:3783878-3783897 | MS.gene29339:CDS | 35.0% | |
| CCATTGGATACAAAAACTAC+AGG | - | chr7.2:3780605-3780624 | None:intergenic | 35.0% | |
| CCGTCTTTCATTGCAAAATT+CGG | + | chr7.2:3781166-3781185 | MS.gene29339:CDS | 35.0% | |
| CGTCTTTCATTGCAAAATTC+GGG | + | chr7.2:3781167-3781186 | MS.gene29339:CDS | 35.0% | |
| CGTGCAGTTATCAATTTGAT+GGG | - | chr7.2:3781036-3781055 | None:intergenic | 35.0% | |
| GAATTTGGCACTTACAAATG+AGG | - | chr7.2:3779945-3779964 | None:intergenic | 35.0% | |
| GACATTACACACACCAAAAT+GGG | - | chr7.2:3783051-3783070 | None:intergenic | 35.0% | |
| GATGAATACATTTACAGAGC+TGG | + | chr7.2:3783984-3784003 | MS.gene29339:CDS | 35.0% | |
| GATTGTCAGAATTCTGAGTA+AGG | - | chr7.2:3781874-3781893 | None:intergenic | 35.0% | |
| GGAGATACTATATAGGCTAA+AGG | + | chr7.2:3783534-3783553 | MS.gene29339:intron | 35.0% | |
| GTGGAATATTTAAAGGAGAG+AGG | - | chr7.2:3782017-3782036 | None:intergenic | 35.0% | |
| GTTGCAGATCTGATTCAATT+TGG | + | chr7.2:3780052-3780071 | MS.gene29339:CDS | 35.0% | |
| GTTTGATCTTAGTCGTTAGA+CGG | + | chr7.2:3781408-3781427 | MS.gene29339:intron | 35.0% | |
| TAATGTTCCATCTCGTTCTT+GGG | + | chr7.2:3783250-3783269 | MS.gene29339:intron | 35.0% | |
| TAGGTAGCTAATTTCCATCT+TGG | - | chr7.2:3782187-3782206 | None:intergenic | 35.0% | |
| TATAAAATCACACTCGCACA+AGG | + | chr7.2:3781377-3781396 | MS.gene29339:intron | 35.0% | |
| TATTTGTCATCTTGAGGTCA+TGG | + | chr7.2:3782433-3782452 | MS.gene29339:CDS | 35.0% | |
| TCAACAAGCATGAATTTGGT+TGG | + | chr7.2:3779751-3779770 | MS.gene29339:CDS | 35.0% | |
| TCATCTTGAACAACAATAGC+TGG | - | chr7.2:3782479-3782498 | None:intergenic | 35.0% | |
| TCTATACCCCTCAACAAAAT+GGG | + | chr7.2:3783168-3783187 | MS.gene29339:intron | 35.0% | |
| TGGTGTGTGTAATGTCTATT+CGG | + | chr7.2:3783055-3783074 | MS.gene29339:intron | 35.0% | |
| TTACCTTCAGAAATAAGTCG+AGG | - | chr7.2:3781635-3781654 | None:intergenic | 35.0% | |
| TTATAAGATAGCACGCTCTT+AGG | - | chr7.2:3783285-3783304 | None:intergenic | 35.0% | |
| TTTCTACATTGATAGGCGTT+GGG | + | chr7.2:3780628-3780647 | MS.gene29339:intron | 35.0% | |
| ! | AACCAAATTCATGCTTGTTG+AGG | - | chr7.2:3779752-3779771 | None:intergenic | 35.0% |
| ! | ACTGATTCACATCAGTTACA+CGG | - | chr7.2:3780228-3780247 | None:intergenic | 35.0% |
| ! | ATTATAAGCAACTTCTAGGG+AGG | + | chr7.2:3781745-3781764 | MS.gene29339:intron | 35.0% |
| ! | CCATCAAATTGATAACTGCA+CGG | + | chr7.2:3781034-3781053 | MS.gene29339:CDS | 35.0% |
| ! | CCGAATTTTGCAATGAAAGA+CGG | - | chr7.2:3781169-3781188 | None:intergenic | 35.0% |
| ! | CCTGTAGTTTTTGTATCCAA+TGG | + | chr7.2:3780602-3780621 | MS.gene29339:intron | 35.0% |
| ! | GAGGTGTTTGTTAAGTGATA+TGG | - | chr7.2:3779733-3779752 | None:intergenic | 35.0% |
| ! | TTGATGGGTAGTTATCAAAG+GGG | - | chr7.2:3781021-3781040 | None:intergenic | 35.0% |
| !! | ATGAATTTGGTTGGTGTTGT+CGG | + | chr7.2:3779760-3779779 | MS.gene29339:CDS | 35.0% |
| !! | CACTAAGTCTTATTTCGTGA+AGG | + | chr7.2:3780026-3780045 | MS.gene29339:intron | 35.0% |
| !! | GAGATGTTGATTTGTGTGTT+TGG | - | chr7.2:3783198-3783217 | None:intergenic | 35.0% |
| !! | GTATTTTGCTCTTGTTTCTC+CGG | + | chr7.2:3780081-3780100 | MS.gene29339:CDS | 35.0% |
| !! | TTTCCAAATGGATTAAGTCC+AGG | - | chr7.2:3783840-3783859 | None:intergenic | 35.0% |
| !!! | GTAGTTTTAGATAAACCTGC+TGG | + | chr7.2:3780448-3780467 | MS.gene29339:CDS | 35.0% |
| AAACAGGTTACAGCTCATGA+AGG | - | chr7.2:3782773-3782792 | None:intergenic | 40.0% | |
| AAAGAGCCTAGTGTTGCAAT+TGG | + | chr7.2:3783930-3783949 | MS.gene29339:CDS | 40.0% | |
| AACTTCCAGAAAACGAATGG+AGG | - | chr7.2:3782948-3782967 | None:intergenic | 40.0% | |
| AAGAACACCCAAATTGACAC+CGG | - | chr7.2:3781332-3781351 | None:intergenic | 40.0% | |
| ACATAGACTCTTCTCCTTCA+TGG | + | chr7.2:3783227-3783246 | MS.gene29339:intron | 40.0% | |
| ACTGATTGCTTCACTAGCAA+AGG | - | chr7.2:3782804-3782823 | None:intergenic | 40.0% | |
| ACTTCCAGAAAACGAATGGA+GGG | - | chr7.2:3782947-3782966 | None:intergenic | 40.0% | |
| ATGAAGGAGAAGAGTCTATG+TGG | - | chr7.2:3783228-3783247 | None:intergenic | 40.0% | |
| ATGAGATTGACTGGAGATCA+AGG | + | chr7.2:3780401-3780420 | MS.gene29339:CDS | 40.0% | |
| ATTGACTGCAGATGGTATCA+AGG | + | chr7.2:3782403-3782422 | MS.gene29339:intron | 40.0% | |
| ATTGTGTTGAAGATTGTGGG+TGG | + | chr7.2:3782501-3782520 | MS.gene29339:CDS | 40.0% | |
| CAAAGAAGCAACTGAACCAT+TGG | + | chr7.2:3780144-3780163 | MS.gene29339:CDS | 40.0% | |
| CACCTCAACAAGCATGAATT+TGG | + | chr7.2:3779747-3779766 | MS.gene29339:CDS | 40.0% | |
| CAGAATTCTGAGTAAGGGAA+AGG | - | chr7.2:3781868-3781887 | None:intergenic | 40.0% | |
| CCGTGCAGTTATCAATTTGA+TGG | - | chr7.2:3781037-3781056 | None:intergenic | 40.0% | |
| CTATACCCCTCAACAAAATG+GGG | + | chr7.2:3783169-3783188 | MS.gene29339:intron | 40.0% | |
| CTATATGCGTCCTACTAACA+CGG | + | chr7.2:3781607-3781626 | MS.gene29339:CDS | 40.0% | |
| CTGAAGGTAACTACGCAAAT+TGG | + | chr7.2:3781645-3781664 | MS.gene29339:intron | 40.0% | |
| GAAGCAATCGATCATACTTC+GGG | - | chr7.2:3779827-3779846 | None:intergenic | 40.0% | |
| GAGATGGAACATTACCATGA+AGG | - | chr7.2:3783244-3783263 | None:intergenic | 40.0% | |
| GGAAGCAATCGATCATACTT+CGG | - | chr7.2:3779828-3779847 | None:intergenic | 40.0% | |
| GTAATGTTCCATCTCGTTCT+TGG | + | chr7.2:3783249-3783268 | MS.gene29339:intron | 40.0% | |
| GTAGCTTACTGTTTCACTGA+TGG | - | chr7.2:3779805-3779824 | None:intergenic | 40.0% | |
| GTCTATACCCCTCAACAAAA+TGG | + | chr7.2:3783167-3783186 | MS.gene29339:intron | 40.0% | |
| TCCATGGTTCATGGTATTAG+TGG | + | chr7.2:3781774-3781793 | MS.gene29339:intron | 40.0% | |
| TTGACTGCAGATGGTATCAA+GGG | + | chr7.2:3782404-3782423 | MS.gene29339:intron | 40.0% | |
| TTTACCTAGGATAACGCTTG+GGG | - | chr7.2:3780288-3780307 | None:intergenic | 40.0% | |
| ! | ATTCTCTCCGGTGTCAATTT+GGG | + | chr7.2:3781322-3781341 | MS.gene29339:intron | 40.0% |
| ! | CAAATTGATAACTGCACGGA+AGG | + | chr7.2:3781038-3781057 | MS.gene29339:CDS | 40.0% |
| ! | GAACACTTAGTTGTTTCACG+AGG | + | chr7.2:3779879-3779898 | MS.gene29339:CDS | 40.0% |
| ! | TTAGGTGCTATGAGATTGAC+TGG | + | chr7.2:3780392-3780411 | MS.gene29339:intron | 40.0% |
| ! | TTCTACATTGATAGGCGTTG+GGG | + | chr7.2:3780629-3780648 | MS.gene29339:intron | 40.0% |
| ! | TTGTTTTCGCTCTTTCAACG+CGG | - | chr7.2:3783456-3783475 | None:intergenic | 40.0% |
| !! | GTGAATCAGTTTGTTGAACC+AGG | + | chr7.2:3780238-3780257 | MS.gene29339:CDS | 40.0% |
| !! | TCTAATTTGCTCTGCAGTAG+CGG | - | chr7.2:3780119-3780138 | None:intergenic | 40.0% |
| !! | TTACATACAGAAGTACCAGC+AGG | - | chr7.2:3780466-3780485 | None:intergenic | 40.0% |
| !!! | GCTCTTTTTTGCAGAACCAA+TGG | - | chr7.2:3780163-3780182 | None:intergenic | 40.0% |
| !!! | TAGTGTGTGTGTTGGTTTTG+CGG | - | chr7.2:3780011-3780030 | None:intergenic | 40.0% |
| AAAGCCCAACTCTCAGTACA+AGG | - | chr7.2:3781832-3781851 | None:intergenic | 45.0% | |
| AACATGACCCAAGAACGAGA+TGG | - | chr7.2:3783260-3783279 | None:intergenic | 45.0% | |
| AGAAGACAGAGTGACACGTT+TGG | + | chr7.2:3782079-3782098 | MS.gene29339:intron | 45.0% | |
| AGTAAGGGAAAGGAGAGGAT+TGG | - | chr7.2:3781858-3781877 | None:intergenic | 45.0% | |
| ATCAAGGATCATAGCTGTGG+AGG | + | chr7.2:3780417-3780436 | MS.gene29339:CDS | 45.0% | |
| ATCATCTCTGCAATTGCAGC+AGG | - | chr7.2:3783813-3783832 | None:intergenic | 45.0% | |
| ATTCTCTCCTTTGTCCTTGG+CGG | + | chr7.2:3783310-3783329 | MS.gene29339:intron | 45.0% | |
| CTACAGGACTTAGCAATGCT+AGG | - | chr7.2:3780589-3780608 | None:intergenic | 45.0% | |
| CTCATTCTCTCCTTTGTCCT+TGG | + | chr7.2:3783307-3783326 | MS.gene29339:intron | 45.0% | |
| CTTCCAGAAAACGAATGGAG+GGG | - | chr7.2:3782946-3782965 | None:intergenic | 45.0% | |
| CTTGCCTTGTACTGAGAGTT+GGG | + | chr7.2:3781825-3781844 | MS.gene29339:intron | 45.0% | |
| GAAGACAGAGTGACACGTTT+GGG | + | chr7.2:3782080-3782099 | MS.gene29339:intron | 45.0% | |
| GAGATCAAGGATCATAGCTG+TGG | + | chr7.2:3780414-3780433 | MS.gene29339:CDS | 45.0% | |
| GATGAGTTCGACCAGTAAGA+AGG | - | chr7.2:3782562-3782581 | None:intergenic | 45.0% | |
| GCAGCTTCTCCTTTACCAAT+TGG | + | chr7.2:3781572-3781591 | MS.gene29339:CDS | 45.0% | |
| GCCACTAATACCATGAACCA+TGG | - | chr7.2:3781778-3781797 | None:intergenic | 45.0% | |
| GGAGATTTGTGTGTAGGACA+TGG | - | chr7.2:3779849-3779868 | None:intergenic | 45.0% | |
| GGGTATAGACACAACACGTT+TGG | - | chr7.2:3783157-3783176 | None:intergenic | 45.0% | |
| GTAAGGGAAAGGAGAGGATT+GGG | - | chr7.2:3781857-3781876 | None:intergenic | 45.0% | |
| TAGAAAAAAGGGCCGAGTGA+TGG | - | chr7.2:3783342-3783361 | None:intergenic | 45.0% | |
| TCTTACTGGTCGAACTCATC+AGG | + | chr7.2:3782562-3782581 | MS.gene29339:CDS | 45.0% | |
| TCTTGCCTTGTACTGAGAGT+TGG | + | chr7.2:3781824-3781843 | MS.gene29339:intron | 45.0% | |
| TGAACAACAATAGCTGGCCA+GGG | - | chr7.2:3782473-3782492 | None:intergenic | 45.0% | |
| TGAAGGCCAATTGCAACACT+AGG | - | chr7.2:3783939-3783958 | None:intergenic | 45.0% | |
| TGCTCTGCAGAGTTGCTAAA+AGG | + | chr7.2:3782335-3782354 | MS.gene29339:intron | 45.0% | |
| TGGAATGCAGAAAGATTCCC+TGG | + | chr7.2:3782453-3782472 | MS.gene29339:CDS | 45.0% | |
| TTCCAGAAAACGAATGGAGG+GGG | - | chr7.2:3782945-3782964 | None:intergenic | 45.0% | |
| TTCTGAGTAAGGGAAAGGAG+AGG | - | chr7.2:3781863-3781882 | None:intergenic | 45.0% | |
| TTGAACAACAATAGCTGGCC+AGG | - | chr7.2:3782474-3782493 | None:intergenic | 45.0% | |
| TTGTACTGAGAGTTGGGCTT+TGG | + | chr7.2:3781831-3781850 | MS.gene29339:intron | 45.0% | |
| TTGTAGGCTTGATGCTCAGT+AGG | + | chr7.2:3780727-3780746 | MS.gene29339:intron | 45.0% | |
| ! | CACTTAGTTGTTTCACGAGG+AGG | + | chr7.2:3779882-3779901 | MS.gene29339:CDS | 45.0% |
| ! | GATTCTCTCCGGTGTCAATT+TGG | + | chr7.2:3781321-3781340 | MS.gene29339:intron | 45.0% |
| ! | GCTTGCAAGGCACCAATAAT+TGG | + | chr7.2:3783771-3783790 | MS.gene29339:CDS | 45.0% |
| ! | TGAACATCAGAAGCGTGTTC+CGG | + | chr7.2:3783383-3783402 | MS.gene29339:intron | 45.0% |
| ! | TGGCTACCCCATTTTGTTGA+GGG | - | chr7.2:3783178-3783197 | None:intergenic | 45.0% |
| ! | TTGGCTACCCCATTTTGTTG+AGG | - | chr7.2:3783179-3783198 | None:intergenic | 45.0% |
| !! | AGCTCAATTTGCTGCTTGCA+AGG | + | chr7.2:3783758-3783777 | MS.gene29339:CDS | 45.0% |
| !! | CAAAAAAGAGCGTCCCTCAA+AGG | + | chr7.2:3780172-3780191 | MS.gene29339:CDS | 45.0% |
| !! | GCTCCTCGACTTATTTCTGA+AGG | + | chr7.2:3781629-3781648 | MS.gene29339:CDS | 45.0% |
| !! | TGGCCGGATTGATTTTGGAT+AGG | + | chr7.2:3783422-3783441 | MS.gene29339:intron | 45.0% |
| !! | TGTGTAGCGTAGTATTGGCT+AGG | + | chr7.2:3781127-3781146 | MS.gene29339:intron | 45.0% |
| !! | TTTACAGAGCTGGTTTGCCT+TGG | + | chr7.2:3783994-3784013 | MS.gene29339:CDS | 45.0% |
| AACCTTTGCAACTCGTGCCT+TGG | + | chr7.2:3780986-3781005 | MS.gene29339:CDS | 50.0% | |
| ACCTTTGCAACTCGTGCCTT+GGG | + | chr7.2:3780987-3781006 | MS.gene29339:CDS | 50.0% | |
| ACGCTTCTGATGTTCAGGCA+TGG | - | chr7.2:3783379-3783398 | None:intergenic | 50.0% | |
| AGCAAAGGCAGCTGGTAAAC+AGG | - | chr7.2:3782789-3782808 | None:intergenic | 50.0% | |
| AGGAGCAACTCCATGGTTCA+TGG | + | chr7.2:3781765-3781784 | MS.gene29339:intron | 50.0% | |
| ATTTGCTCTGCAGTAGCGGT+TGG | - | chr7.2:3780115-3780134 | None:intergenic | 50.0% | |
| CAAAGGGGTTGTCAATCCCA+AGG | - | chr7.2:3781006-3781025 | None:intergenic | 50.0% | |
| CGCTTCTGATGTTCAGGCAT+GGG | - | chr7.2:3783378-3783397 | None:intergenic | 50.0% | |
| CTGCAGATGGTATCAAGGGA+TGG | + | chr7.2:3782408-3782427 | MS.gene29339:intron | 50.0% | |
| CTGTTCTAACCCACCTGAGT+TGG | + | chr7.2:3781242-3781261 | MS.gene29339:intron | 50.0% | |
| CTTGGCGGAGATTTGTGTGT+AGG | - | chr7.2:3779855-3779874 | None:intergenic | 50.0% | |
| GAATCGAACCTGAGACCTTG+CGG | - | chr7.2:3781306-3781325 | None:intergenic | 50.0% | |
| GGAACACGCTTCTGATGTTC+AGG | - | chr7.2:3783384-3783403 | None:intergenic | 50.0% | |
| GGTTAGGTAGGGGAAACTAC+CGG | + | chr7.2:3780942-3780961 | MS.gene29339:intron | 50.0% | |
| GTCTCAGGTTCGATTCTCTC+CGG | + | chr7.2:3781310-3781329 | MS.gene29339:intron | 50.0% | |
| GTTAGGCGCATTAGCCAAGA+TGG | + | chr7.2:3782170-3782189 | MS.gene29339:intron | 50.0% | |
| GTTCAGGCATGGGCGTAAAA+GGG | - | chr7.2:3783368-3783387 | None:intergenic | 50.0% | |
| TAGGCTTGATGCTCAGTAGG+TGG | + | chr7.2:3780730-3780749 | MS.gene29339:intron | 50.0% | |
| TCCAGAAAACGAATGGAGGG+GGG | - | chr7.2:3782944-3782963 | None:intergenic | 50.0% | |
| TGTTCAGGCATGGGCGTAAA+AGG | - | chr7.2:3783369-3783388 | None:intergenic | 50.0% | |
| TGTTCCGGGTGGTCCAATAA+CGG | + | chr7.2:3783398-3783417 | MS.gene29339:intron | 50.0% | |
| ! | GAACATCAGAAGCGTGTTCC+GGG | + | chr7.2:3783384-3783403 | MS.gene29339:intron | 50.0% |
| ! | GGCTACCCCATTTTGTTGAG+GGG | - | chr7.2:3783177-3783196 | None:intergenic | 50.0% |
| ! | TTGATAACTGCACGGAAGGC+TGG | + | chr7.2:3781042-3781061 | MS.gene29339:CDS | 50.0% |
| !! | ATTGATAGGCGTTGGGGTCA+AGG | + | chr7.2:3780635-3780654 | MS.gene29339:intron | 50.0% |
| !! | GTGGTATTGGCTTGGGTCTT+GGG | + | chr7.2:3781269-3781288 | MS.gene29339:intron | 50.0% |
| AGACCCAAGCCAATACCACC+AGG | - | chr7.2:3781268-3781287 | None:intergenic | 55.0% | |
| AGTCGAGGAGCCGTGTTAGT+AGG | - | chr7.2:3781620-3781639 | None:intergenic | 55.0% | |
| CAATACCACCAGGCCAACTC+AGG | - | chr7.2:3781258-3781277 | None:intergenic | 55.0% | |
| CCAGAAAACGAATGGAGGGG+GGG | - | chr7.2:3782943-3782962 | None:intergenic | 55.0% | |
| GCTTCACTAGCAAAGGCAGC+TGG | - | chr7.2:3782797-3782816 | None:intergenic | 55.0% | |
| GTTCCGGGTGGTCCAATAAC+GGG | + | chr7.2:3783399-3783418 | MS.gene29339:intron | 55.0% | |
| TCAATCCGGCCACCCGTTAT+TGG | - | chr7.2:3783414-3783433 | None:intergenic | 55.0% | |
| TCCCAAGGCACGAGTTGCAA+AGG | - | chr7.2:3780991-3781010 | None:intergenic | 55.0% | |
| TCTAGGGAGGAGCAACTCCA+TGG | + | chr7.2:3781758-3781777 | MS.gene29339:intron | 55.0% | |
| TGCACCCCAAGCGTTATCCT+AGG | + | chr7.2:3780281-3780300 | MS.gene29339:CDS | 55.0% | |
| TGCACTCGCAGGTAAGTTCC+TGG | - | chr7.2:3780259-3780278 | None:intergenic | 55.0% | |
| ! | CTGAGTTGGCCTGGTGGTAT+TGG | + | chr7.2:3781256-3781275 | MS.gene29339:intron | 55.0% |
| !! | AAAGGGCCGAGTGATGGACT+TGG | - | chr7.2:3783336-3783355 | None:intergenic | 55.0% |
| !! | ACAGAGCTGGTTTGCCTTGG+TGG | + | chr7.2:3783997-3784016 | MS.gene29339:CDS | 55.0% |
| !! | ACGGGTGGCCGGATTGATTT+TGG | + | chr7.2:3783417-3783436 | MS.gene29339:intron | 55.0% |
| !! | GGTGGTATTGGCTTGGGTCT+TGG | + | chr7.2:3781268-3781287 | MS.gene29339:intron | 55.0% |
| !! | TGGCCTGGTGGTATTGGCTT+GGG | + | chr7.2:3781262-3781281 | MS.gene29339:intron | 55.0% |
| !! | TTGGCCTGGTGGTATTGGCT+TGG | + | chr7.2:3781261-3781280 | MS.gene29339:intron | 55.0% |
| ACCACCAGGCCAACTCAGGT+GGG | - | chr7.2:3781254-3781273 | None:intergenic | 60.0% | |
| CAGCTGCCGCGGAACAAGAT+TGG | - | chr7.2:3779672-3779691 | None:intergenic | 60.0% | |
| CCACCCGTTATTGGACCACC+CGG | - | chr7.2:3783405-3783424 | None:intergenic | 60.0% | |
| GACTTGGCCGCCAAGGACAA+AGG | - | chr7.2:3783320-3783339 | None:intergenic | 60.0% | |
| GTAGCGGTTGGAGGAGGTTC+CGG | - | chr7.2:3780103-3780122 | None:intergenic | 60.0% | |
| GTGGCGCCAATCTTGTTCCG+CGG | + | chr7.2:3779663-3779682 | MS.gene29339:CDS | 60.0% | |
| TACCACCAGGCCAACTCAGG+TGG | - | chr7.2:3781255-3781274 | None:intergenic | 60.0% | |
| TCGAACCTGAGACCTTGCGG+AGG | - | chr7.2:3781303-3781322 | None:intergenic | 60.0% | |
| TCTGCAGTAGCGGTTGGAGG+AGG | - | chr7.2:3780109-3780128 | None:intergenic | 60.0% | |
| TGCTCTGCAGTAGCGGTTGG+AGG | - | chr7.2:3780112-3780131 | None:intergenic | 60.0% | |
| TGGCGGCCAAGTCCATCACT+CGG | + | chr7.2:3783327-3783346 | MS.gene29339:intron | 60.0% | |
| ! | CATCAGAAGCGTGTTCCGGG+TGG | + | chr7.2:3783387-3783406 | MS.gene29339:intron | 60.0% |
| ! | CCCCCCCTCCATTCGTTTTC+TGG | + | chr7.2:3782940-3782959 | MS.gene29339:intron | 60.0% |
| ! | CTAACCCACCTGAGTTGGCC+TGG | + | chr7.2:3781247-3781266 | MS.gene29339:intron | 60.0% |
| !! | AGTGATGGACTTGGCCGCCA+AGG | - | chr7.2:3783327-3783346 | None:intergenic | 60.0% |
| !! | GAGCTGGTTTGCCTTGGTGG+AGG | + | chr7.2:3784000-3784019 | MS.gene29339:CDS | 60.0% |
| !! | GTGGTCCAATAACGGGTGGC+CGG | + | chr7.2:3783406-3783425 | MS.gene29339:intron | 60.0% |
| CTGTCGTAGCCTCGGCGTTC+CGG | + | chr7.2:3779689-3779708 | MS.gene29339:CDS | 65.0% | |
| GTGCTCCTCCGCAAGGTCTC+AGG | + | chr7.2:3781295-3781314 | MS.gene29339:intron | 65.0% | |
| TAGCCTCGGCGTTCCGGATG+CGG | + | chr7.2:3779695-3779714 | MS.gene29339:CDS | 65.0% | |
| ! | ACCCACCTGAGTTGGCCTGG+TGG | + | chr7.2:3781250-3781269 | MS.gene29339:intron | 65.0% |
| ! | CCGGGTGGTCCAATAACGGG+TGG | + | chr7.2:3783402-3783421 | MS.gene29339:intron | 65.0% |
| ! | TGGGAGTGTGCTCCTCCGCA+AGG | + | chr7.2:3781288-3781307 | MS.gene29339:intron | 65.0% |
| CGAGGCTACGACAGCTGCCG+CGG | - | chr7.2:3779683-3779702 | None:intergenic | 70.0% | |
| CGCGGCAGCTGTCGTAGCCT+CGG | + | chr7.2:3779681-3779700 | MS.gene29339:CDS | 70.0% | |
| CGTTCCGGATGCGGCGAGTG+CGG | + | chr7.2:3779704-3779723 | MS.gene29339:CDS | 70.0% | |
| GGAACCGCACTCGCCGCATC+CGG | - | chr7.2:3779711-3779730 | None:intergenic | 70.0% | |
| TGGGGTGCACGTGCACTCGC+AGG | - | chr7.2:3780270-3780289 | None:intergenic | 70.0% | |
| TCGCCGCATCCGGAACGCCG+AGG | - | chr7.2:3779701-3779720 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 3779648 | 3784028 | 3779648 | ID=MS.gene29339 |
| chr7.2 | mRNA | 3779648 | 3784028 | 3779648 | ID=MS.gene29339.t1;Parent=MS.gene29339 |
| chr7.2 | exon | 3779648 | 3779949 | 3779648 | ID=MS.gene29339.t1.exon1;Parent=MS.gene29339.t1 |
| chr7.2 | CDS | 3779648 | 3779949 | 3779648 | ID=cds.MS.gene29339.t1;Parent=MS.gene29339.t1 |
| chr7.2 | exon | 3780048 | 3780302 | 3780048 | ID=MS.gene29339.t1.exon2;Parent=MS.gene29339.t1 |
| chr7.2 | CDS | 3780048 | 3780302 | 3780048 | ID=cds.MS.gene29339.t1;Parent=MS.gene29339.t1 |
| chr7.2 | exon | 3780396 | 3780477 | 3780396 | ID=MS.gene29339.t1.exon3;Parent=MS.gene29339.t1 |
| chr7.2 | CDS | 3780396 | 3780477 | 3780396 | ID=cds.MS.gene29339.t1;Parent=MS.gene29339.t1 |
| chr7.2 | exon | 3780948 | 3781063 | 3780948 | ID=MS.gene29339.t1.exon4;Parent=MS.gene29339.t1 |
| chr7.2 | CDS | 3780948 | 3781063 | 3780948 | ID=cds.MS.gene29339.t1;Parent=MS.gene29339.t1 |
| chr7.2 | exon | 3781134 | 3781188 | 3781134 | ID=MS.gene29339.t1.exon5;Parent=MS.gene29339.t1 |
| chr7.2 | CDS | 3781134 | 3781188 | 3781134 | ID=cds.MS.gene29339.t1;Parent=MS.gene29339.t1 |
| chr7.2 | exon | 3781539 | 3781650 | 3781539 | ID=MS.gene29339.t1.exon6;Parent=MS.gene29339.t1 |
| chr7.2 | CDS | 3781539 | 3781650 | 3781539 | ID=cds.MS.gene29339.t1;Parent=MS.gene29339.t1 |
| chr7.2 | exon | 3782414 | 3782583 | 3782414 | ID=MS.gene29339.t1.exon7;Parent=MS.gene29339.t1 |
| chr7.2 | CDS | 3782414 | 3782583 | 3782414 | ID=cds.MS.gene29339.t1;Parent=MS.gene29339.t1 |
| chr7.2 | exon | 3783753 | 3784028 | 3783753 | ID=MS.gene29339.t1.exon8;Parent=MS.gene29339.t1 |
| chr7.2 | CDS | 3783753 | 3784028 | 3783753 | ID=cds.MS.gene29339.t1;Parent=MS.gene29339.t1 |
| Gene Sequence |
| Protein sequence |
