Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29345.t1 | XP_003626275.1 | 90.2 | 685 | 62 | 2 | 1 | 682 | 1 | 683 | 4.20E-261 | 911 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29345.t1 | Q8S9K3 | 30.4 | 253 | 132 | 8 | 128 | 375 | 93 | 306 | 2.0e-17 | 92.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29345.t1 | G7KYM5 | 90.2 | 685 | 62 | 2 | 1 | 682 | 1 | 683 | 3.0e-261 | 911.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049207 | MS.gene29345 | 0.811307 | 7.48E-51 | -1.69E-46 |
| MS.gene049824 | MS.gene29345 | 0.80122 | 9.98E-49 | -1.69E-46 |
| MS.gene050885 | MS.gene29345 | 0.885031 | 1.15E-71 | -1.69E-46 |
| MS.gene052584 | MS.gene29345 | 0.806355 | 8.56E-50 | -1.69E-46 |
| MS.gene052717 | MS.gene29345 | 0.825826 | 3.79E-54 | -1.69E-46 |
| MS.gene053080 | MS.gene29345 | 0.811972 | 5.36E-51 | -1.69E-46 |
| MS.gene05308 | MS.gene29345 | 0.801898 | 7.24E-49 | -1.69E-46 |
| MS.gene053122 | MS.gene29345 | 0.804875 | 1.75E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene29345 | 0.846074 | 2.73E-59 | -1.69E-46 |
| MS.gene056215 | MS.gene29345 | 0.80739 | 5.18E-50 | -1.69E-46 |
| MS.gene056403 | MS.gene29345 | 0.83414 | 3.56E-56 | -1.69E-46 |
| MS.gene056605 | MS.gene29345 | 0.838501 | 2.77E-57 | -1.69E-46 |
| MS.gene05689 | MS.gene29345 | 0.864685 | 1.02E-64 | -1.69E-46 |
| MS.gene059935 | MS.gene29345 | 0.848995 | 4.29E-60 | -1.69E-46 |
| MS.gene060830 | MS.gene29345 | 0.814703 | 1.35E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29345.t1 | MTR_7g113360 | 94.144 | 888 | 20 | 3 | 1 | 858 | 1 | 886 | 0.0 | 1686 |
| MS.gene29345.t1 | MTR_1g032260 | 38.806 | 335 | 126 | 8 | 122 | 406 | 59 | 364 | 3.31e-65 | 227 |
| MS.gene29345.t1 | MTR_6g069400 | 39.116 | 294 | 145 | 8 | 124 | 406 | 65 | 335 | 9.97e-53 | 191 |
| MS.gene29345.t1 | MTR_6g069400 | 47.222 | 72 | 34 | 2 | 333 | 402 | 335 | 404 | 2.72e-15 | 79.7 |
| MS.gene29345.t1 | MTR_6g069400 | 38.889 | 90 | 34 | 2 | 327 | 404 | 371 | 451 | 2.59e-11 | 67.4 |
| MS.gene29345.t1 | MTR_7g087047 | 34.615 | 286 | 135 | 9 | 125 | 406 | 78 | 315 | 2.47e-40 | 161 |
| MS.gene29345.t1 | MTR_7g087047 | 42.282 | 149 | 73 | 3 | 261 | 406 | 2 | 140 | 2.14e-30 | 129 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29345.t1 | AT1G55040 | 52.103 | 737 | 272 | 20 | 6 | 703 | 5 | 699 | 0.0 | 613 |
| MS.gene29345.t1 | AT1G70650 | 34.648 | 355 | 161 | 7 | 125 | 441 | 44 | 365 | 2.88e-59 | 209 |
| MS.gene29345.t1 | AT1G70650 | 33.333 | 363 | 155 | 7 | 125 | 441 | 44 | 365 | 4.13e-52 | 192 |
| MS.gene29345.t1 | AT1G48570 | 36.765 | 340 | 148 | 10 | 125 | 419 | 60 | 377 | 5.38e-51 | 186 |
| MS.gene29345.t1 | AT1G48570 | 51.351 | 74 | 36 | 0 | 333 | 406 | 364 | 437 | 2.96e-17 | 85.9 |
| MS.gene29345.t1 | AT5G17790 | 33.987 | 306 | 156 | 9 | 128 | 428 | 93 | 357 | 6.32e-36 | 146 |
Find 218 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATAAAATGGTGCAGGATTT+AGG | 0.123255 | 7.2:+3840359 | MS.gene29345:CDS |
| AAACAGGTTGTTCGGGAATT+TGG | 0.177849 | 7.2:-3840139 | None:intergenic |
| CTTGGGTTTGATCCTATTAA+TGG | 0.181047 | 7.2:+3841357 | MS.gene29345:CDS |
| AGAACCAAAGCTTAATTTCT+TGG | 0.211002 | 7.2:-3842919 | None:intergenic |
| CATGCTGCTTGTCTTAATTT+CGG | 0.227175 | 7.2:+3840446 | MS.gene29345:CDS |
| GAGAAGAAGGTTTAGGGTTT+GGG | 0.230724 | 7.2:-3839998 | None:intergenic |
| TGTCATTACCATAAGATTTC+CGG | 0.238193 | 7.2:-3843208 | None:intergenic |
| TGTCATTACCATAAGATTTC+CGG | 0.238193 | 7.2:-3843376 | None:intergenic |
| TGTCATTGCCATAAGATTTC+CGG | 0.242018 | 7.2:-3843292 | None:intergenic |
| AAGGTTTAGGGTTTGGGTTT+TGG | 0.252849 | 7.2:-3839992 | None:intergenic |
| GGATCGTCTCGGAAATCTTA+TGG | 0.256725 | 7.2:+3843449 | MS.gene29345:CDS |
| GCAGAGAGAGAAGAAGGTTT+AGG | 0.258649 | 7.2:-3840005 | None:intergenic |
| ATCACTGGAGGAGGGAGATT+TGG | 0.276652 | 7.2:-3841483 | None:intergenic |
| AGAATCTGCATATTCAAAAT+TGG | 0.286698 | 7.2:-3842400 | None:intergenic |
| AATAAAAGTAAAACAGCTTC+TGG | 0.290479 | 7.2:+3842735 | MS.gene29345:CDS |
| ATAAAATGGTGCAGGATTTA+GGG | 0.292247 | 7.2:+3840360 | MS.gene29345:CDS |
| CAGAGAGAGAAGAAGGTTTA+GGG | 0.303482 | 7.2:-3840004 | None:intergenic |
| AAATCATCAAACCCTGTTCT+AGG | 0.305189 | 7.2:-3842558 | None:intergenic |
| AGAGAAGAAGGTTTAGGGTT+TGG | 0.323448 | 7.2:-3839999 | None:intergenic |
| AAAGGGAACAGACATGATTC+TGG | 0.325410 | 7.2:+3843023 | MS.gene29345:CDS |
| GAGGCAGGATATTCAAGTTT+TGG | 0.331296 | 7.2:+3840735 | MS.gene29345:CDS |
| GACCTCTGCCTTTCCTTCTC+TGG | 0.332244 | 7.2:-3842893 | None:intergenic |
| TATTCATCCAGGCAAAATAA+AGG | 0.336980 | 7.2:+3843005 | MS.gene29345:CDS |
| GAGGAAGGATGAAGATAAAA+TGG | 0.341906 | 7.2:+3840346 | MS.gene29345:CDS |
| ACCACCTTTCTGTCCACATT+GGG | 0.346893 | 7.2:-3840772 | None:intergenic |
| TCATCATCCCGGAAATCTTA+TGG | 0.347748 | 7.2:+3843284 | MS.gene29345:CDS |
| TCCCGTCCAACACGTCTCTT+TGG | 0.350726 | 7.2:-3841546 | None:intergenic |
| CCCAAGAGACAGTTGCTTCC+AGG | 0.351064 | 7.2:+3842009 | MS.gene29345:CDS |
| GACGAAGATGTTGTTGTTGT+TGG | 0.352381 | 7.2:-3840185 | None:intergenic |
| ATGCTGCTTGTCTTAATTTC+GGG | 0.354542 | 7.2:+3840447 | MS.gene29345:CDS |
| TAACAGCCAACCTGTGGAAT+TGG | 0.356893 | 7.2:+3840235 | MS.gene29345:CDS |
| TCGTCATCCCGGAAATCTTA+TGG | 0.358923 | 7.2:+3843368 | MS.gene29345:CDS |
| GTCATTGCCATAAGATTTCC+GGG | 0.366384 | 7.2:-3843291 | None:intergenic |
| GGATCATCCCGGAAATCTTA+TGG | 0.366429 | 7.2:+3843200 | MS.gene29345:CDS |
| GGAGGAGGTTGTTTCACCTT+TGG | 0.369295 | 7.2:-3841519 | None:intergenic |
| GTCATTACCATAAGATTTCC+GGG | 0.370143 | 7.2:-3843207 | None:intergenic |
| GTCATTACCATAAGATTTCC+GGG | 0.370143 | 7.2:-3843375 | None:intergenic |
| GGAGGGAGATTTGGATCAAT+AGG | 0.378515 | 7.2:-3841474 | None:intergenic |
| GATTCAATTGATGGAGAGAT+TGG | 0.383239 | 7.2:+3840298 | MS.gene29345:CDS |
| TGGTAATGACAGAGGGTCTC+AGG | 0.384433 | 7.2:+3843220 | MS.gene29345:CDS |
| TGGCAATGACAGAGGGTCTC+AGG | 0.384433 | 7.2:+3843304 | MS.gene29345:CDS |
| TGGTAATGACAGAGGGTCTC+AGG | 0.384433 | 7.2:+3843388 | MS.gene29345:CDS |
| ACGCCCACCTGATGAATTCC+TGG | 0.384843 | 7.2:+3842251 | MS.gene29345:CDS |
| AGCTTCCATTCTTGAACTAC+TGG | 0.385556 | 7.2:-3842631 | None:intergenic |
| CTCTTCAACGAATTCGTGCT+TGG | 0.388472 | 7.2:+3840093 | MS.gene29345:CDS |
| GGAGGTTGTTTCACCTTTGG+TGG | 0.390138 | 7.2:-3841516 | None:intergenic |
| CTGCCCATCTTATTAAAGTT+AGG | 0.390467 | 7.2:-3842309 | None:intergenic |
| ATAATCAAGTTCATCTTCCT+TGG | 0.394846 | 7.2:-3842808 | None:intergenic |
| TAGAAATGCTAGAGGGTCTC+AGG | 0.395388 | 7.2:+3843139 | MS.gene29345:CDS |
| TCCTGGAAGCAACTGTCTCT+TGG | 0.396449 | 7.2:-3842010 | None:intergenic |
| AGGACTGATGATCCATTAAT+AGG | 0.396782 | 7.2:-3841369 | None:intergenic |
| TGGACCTAACTTTAATAAGA+TGG | 0.398446 | 7.2:+3842305 | MS.gene29345:CDS |
| GTCATCAAAGTCAAAATTCC+AGG | 0.409210 | 7.2:-3842352 | None:intergenic |
| TGTATTCTTGCGAACTGAAC+GGG | 0.412398 | 7.2:-3842772 | None:intergenic |
| GATTCTGAAACAGGTTGTTC+GGG | 0.413379 | 7.2:-3840146 | None:intergenic |
| TGATTCTGAAACAGGTTGTT+CGG | 0.413387 | 7.2:-3840147 | None:intergenic |
| AGAAGGAACTTTACTAAAGA+TGG | 0.415912 | 7.2:+3843047 | MS.gene29345:CDS |
| CCTGGAAGCAACTGTCTCTT+GGG | 0.416125 | 7.2:-3842009 | None:intergenic |
| TTTACTAAAGATGGAAAGTC+TGG | 0.419164 | 7.2:+3843056 | MS.gene29345:CDS |
| GACAGTTGCTTCCAGGAGAA+TGG | 0.419362 | 7.2:+3842016 | MS.gene29345:CDS |
| AACCCTGTTCTAGGTCTAGA+AGG | 0.422985 | 7.2:-3842549 | None:intergenic |
| CCAACCAAGAAATTAAGCTT+TGG | 0.427354 | 7.2:+3842915 | MS.gene29345:CDS |
| TCCATCAATTGAATCCATTC+CGG | 0.429098 | 7.2:-3840290 | None:intergenic |
| GATCGTCTCGGAAATCTTAT+GGG | 0.429943 | 7.2:+3843450 | MS.gene29345:CDS |
| AGGGTTTAAGAGCCGGCGTT+TGG | 0.434415 | 7.2:-3839940 | None:intergenic |
| GTCTTAATTTCGGGAAGGAC+CGG | 0.437259 | 7.2:+3840456 | MS.gene29345:CDS |
| CCAAAGCTTAATTTCTTGGT+TGG | 0.439853 | 7.2:-3842915 | None:intergenic |
| ACAGTTTAATAAATACAGTA+TGG | 0.440806 | 7.2:+3843541 | MS.gene29345:CDS |
| GGTGGTGGTGATTCTGAAAC+AGG | 0.440996 | 7.2:-3840155 | None:intergenic |
| GCCGGAATGGATTCAATTGA+TGG | 0.444180 | 7.2:+3840289 | MS.gene29345:CDS |
| AAGTTGAGAAATGGAAGAAT+GGG | 0.451734 | 7.2:-3839968 | None:intergenic |
| GGGATGATGTTGAGATGAAA+AGG | 0.451787 | 7.2:+3841565 | MS.gene29345:CDS |
| GGCAAGAGGTTTCCAATGCC+TGG | 0.456231 | 7.2:+3842334 | MS.gene29345:CDS |
| ATTCATCCAGGCAAAATAAA+GGG | 0.459718 | 7.2:+3843006 | MS.gene29345:CDS |
| GTTGTTGTTGGTGATGGTGG+TGG | 0.460900 | 7.2:-3840173 | None:intergenic |
| AAATCTTATGGGAATGATAG+AGG | 0.462034 | 7.2:+3843461 | MS.gene29345:CDS |
| TTGTGCATCCGTGGCCGGAA+TGG | 0.462193 | 7.2:+3840276 | MS.gene29345:CDS |
| TCGGTACATTCCCATTCTCC+TGG | 0.465682 | 7.2:-3842027 | None:intergenic |
| TCTGACGAAGATGGCAGTGC+TGG | 0.465695 | 7.2:+3842945 | MS.gene29345:CDS |
| CAACTGTCTCTTGGGACGCT+TGG | 0.467805 | 7.2:-3842001 | None:intergenic |
| GGTTGTTTCACCTTTGGTGG+AGG | 0.468414 | 7.2:-3841513 | None:intergenic |
| GTTGTTGGTGATGGTGGTGG+TGG | 0.468976 | 7.2:-3840170 | None:intergenic |
| GCGAAGAATAGGAGCGTCCC+AGG | 0.470297 | 7.2:+3842489 | MS.gene29345:CDS |
| GTTGTTGTTGTTGGTGATGG+TGG | 0.472841 | 7.2:-3840176 | None:intergenic |
| GATGTTGTTGTTGTTGGTGA+TGG | 0.474773 | 7.2:-3840179 | None:intergenic |
| GGTTCTGACTCTGACGAAGA+TGG | 0.475635 | 7.2:+3842936 | MS.gene29345:CDS |
| TTTCAGGTCGTTGTCGAGGC+AGG | 0.477432 | 7.2:+3840720 | MS.gene29345:intron |
| AAAGTCAAAATTCCAGGCAT+TGG | 0.477506 | 7.2:-3842346 | None:intergenic |
| TTTAAGGAAGCTTGTCCACC+TGG | 0.477767 | 7.2:+3840810 | MS.gene29345:CDS |
| ATGCGAATGCTACTGACACT+TGG | 0.481025 | 7.2:+3841339 | MS.gene29345:CDS |
| ACAGTTGCTTCCAGGAGAAT+GGG | 0.481216 | 7.2:+3842017 | MS.gene29345:CDS |
| GAAGTTGAGAAATGGAAGAA+TGG | 0.484391 | 7.2:-3839969 | None:intergenic |
| CATCAAACCGCTTCCGATCA+CGG | 0.489974 | 7.2:-3843250 | None:intergenic |
| CATCAAACCGCTTCCGATCA+CGG | 0.489974 | 7.2:-3843334 | None:intergenic |
| TAAATACAGTATGGATGAGA+AGG | 0.490347 | 7.2:+3843550 | MS.gene29345:CDS |
| TAGCATTTCTATAAGACTGC+CGG | 0.493085 | 7.2:-3843127 | None:intergenic |
| ACAGACTTCTGCTTCAAAAG+TGG | 0.494941 | 7.2:-3841399 | None:intergenic |
| GGACCTAACTTTAATAAGAT+GGG | 0.495914 | 7.2:+3842306 | MS.gene29345:CDS |
| TCTGAGATTGTACATGATGA+AGG | 0.496169 | 7.2:+3840392 | MS.gene29345:CDS |
| TATGAGCTAGAAACTGAAAC+AGG | 0.496805 | 7.2:+3842606 | MS.gene29345:CDS |
| GGTCCTTCTAGACCTAGAAC+AGG | 0.497216 | 7.2:+3842546 | MS.gene29345:CDS |
| GAATATGTTAATGCCGGTCC+CGG | 0.498620 | 7.2:+3842525 | MS.gene29345:CDS |
| GGCTACAAATCAAACATGTT+CGG | 0.500236 | 7.2:+3843083 | MS.gene29345:CDS |
| ACAATTGTTTCTCAAGCTGC+AGG | 0.501134 | 7.2:-3841262 | None:intergenic |
| TCTTCACCAATTCCACAGGT+TGG | 0.501674 | 7.2:-3840241 | None:intergenic |
| GGAATTTGTGCATCCGTGGC+CGG | 0.502110 | 7.2:+3840271 | MS.gene29345:CDS |
| GAAGTAACCGTGATCGGAAG+CGG | 0.504209 | 7.2:+3843243 | MS.gene29345:CDS |
| GAAGTAACCGTGATCGGAAG+CGG | 0.504209 | 7.2:+3843327 | MS.gene29345:CDS |
| AGGAACCAGTAGTTCAAGAA+TGG | 0.504785 | 7.2:+3842626 | MS.gene29345:CDS |
| AGCATTTCTATAAGACTGCC+GGG | 0.507044 | 7.2:-3843126 | None:intergenic |
| GTAGGCAGAAATTTGATGAC+AGG | 0.508546 | 7.2:+3843504 | MS.gene29345:CDS |
| TTCAAAACGACAATGGCGTT+CGG | 0.508901 | 7.2:+3839897 | None:intergenic |
| AAGGGAACAGACATGATTCT+GGG | 0.508952 | 7.2:+3843024 | MS.gene29345:CDS |
| AATTGAATCCATTCCGGCCA+CGG | 0.511781 | 7.2:-3840284 | None:intergenic |
| AAGCTTGTCCACCTGGATGA+AGG | 0.515198 | 7.2:+3840817 | MS.gene29345:CDS |
| GGATGAAGATAAAATGGTGC+AGG | 0.516341 | 7.2:+3840352 | MS.gene29345:CDS |
| GGATGATGTTGAGATGAAAA+GGG | 0.519453 | 7.2:+3841566 | MS.gene29345:CDS |
| TCCAAAGAGACGTGTTGGAC+GGG | 0.520056 | 7.2:+3841545 | MS.gene29345:CDS |
| TTTGAATATGCAGATTCTCA+TGG | 0.520470 | 7.2:+3842405 | MS.gene29345:CDS |
| TGTTCTAGGTCTAGAAGGAC+CGG | 0.521263 | 7.2:-3842544 | None:intergenic |
| TATTCGTCATCGTGGGACCC+TGG | 0.522679 | 7.2:-3842507 | None:intergenic |
| TCTTTCTTCACCAATTCCAC+AGG | 0.527330 | 7.2:-3840245 | None:intergenic |
| CACTTACATCTCCTTCATCC+AGG | 0.527939 | 7.2:-3840828 | None:intergenic |
| AGACGAGCAGAGAGAGAAGA+AGG | 0.529212 | 7.2:-3840011 | None:intergenic |
| GCTTCAAAAGTGGCTTGTTG+AGG | 0.532551 | 7.2:-3841389 | None:intergenic |
| CTCAGGGAAGTAACCGTGAT+CGG | 0.533292 | 7.2:+3843237 | MS.gene29345:CDS |
| CTCAGGGAAGTAACCGTGAT+CGG | 0.533292 | 7.2:+3843321 | MS.gene29345:CDS |
| CAATGCTCGGCATGTGGGGT+GGG | 0.534025 | 7.2:+3842455 | MS.gene29345:CDS |
| TTTCTTCAGATAACAATGCT+CGG | 0.538795 | 7.2:+3842442 | MS.gene29345:CDS |
| TTTCTGCTGCCGACCAGAGA+AGG | 0.538950 | 7.2:+3842880 | MS.gene29345:CDS |
| ACAATGCTCGGCATGTGGGG+TGG | 0.543239 | 7.2:+3842454 | MS.gene29345:CDS |
| AGGTCTAGAAGGACCGGGAC+CGG | 0.544783 | 7.2:-3842538 | None:intergenic |
| GATAACAATGCTCGGCATGT+GGG | 0.545317 | 7.2:+3842450 | MS.gene29345:CDS |
| ATTCGTCATCGTGGGACCCT+GGG | 0.546845 | 7.2:-3842506 | None:intergenic |
| AACCACCTTTCTGTCCACAT+TGG | 0.551275 | 7.2:-3840773 | None:intergenic |
| CTCCAAAGAGACGTGTTGGA+CGG | 0.552538 | 7.2:+3841544 | MS.gene29345:CDS |
| CATCAAACCTCTTCTTATCA+CGG | 0.553176 | 7.2:-3843169 | None:intergenic |
| CTCTTCTTCTCACCAAACGC+CGG | 0.559614 | 7.2:+3839928 | MS.gene29345:CDS |
| GATGACAGGGAGCACGGCAG+AGG | 0.560359 | 7.2:+3843518 | MS.gene29345:CDS |
| CGTCTCTTTGGAGTAGGAGG+AGG | 0.560622 | 7.2:-3841534 | None:intergenic |
| TAAATGAGGCATATTCATCC+AGG | 0.563376 | 7.2:+3842994 | MS.gene29345:CDS |
| AGATAACAATGCTCGGCATG+TGG | 0.563963 | 7.2:+3842449 | MS.gene29345:CDS |
| GAGGGTCTCGAGGAAATGAC+CGG | 0.565783 | 7.2:+3843480 | MS.gene29345:CDS |
| CATACCTCAACAAATCAAAC+CGG | 0.566974 | 7.2:-3840475 | None:intergenic |
| AAATACAGTATGGATGAGAA+GGG | 0.567899 | 7.2:+3843551 | MS.gene29345:CDS |
| GGCAATGACAGAGGGTCTCA+GGG | 0.568452 | 7.2:+3843305 | MS.gene29345:CDS |
| TACATCTTTCTCTCGATCCA+AGG | 0.570204 | 7.2:+3842791 | MS.gene29345:CDS |
| TGCGAATGCTACTGACACTT+GGG | 0.570349 | 7.2:+3841340 | MS.gene29345:CDS |
| CATCAAATTTCTGCCTACTC+CGG | 0.570481 | 7.2:-3843499 | None:intergenic |
| GACCAGAGAAGGAAAGGCAG+AGG | 0.570783 | 7.2:+3842891 | MS.gene29345:CDS |
| ATGTATTCTTGCGAACTGAA+CGG | 0.571403 | 7.2:-3842773 | None:intergenic |
| GCAACTTCTTGAATTACAGA+AGG | 0.571871 | 7.2:+3842199 | MS.gene29345:CDS |
| CTGAGATTGTACATGATGAA+GGG | 0.573048 | 7.2:+3840393 | MS.gene29345:CDS |
| CCAACACGTCTCTTTGGAGT+AGG | 0.575104 | 7.2:-3841540 | None:intergenic |
| TGCTTGTCTTAATTTCGGGA+AGG | 0.576196 | 7.2:+3840451 | MS.gene29345:CDS |
| TGAAGATGATGACTTAAATG+AGG | 0.578584 | 7.2:+3842980 | MS.gene29345:CDS |
| CTCAGGGAAGTAACCGTGGT+CGG | 0.578926 | 7.2:+3843405 | MS.gene29345:CDS |
| TCTGGTCGGCAGCAGAAACA+TGG | 0.585007 | 7.2:-3842875 | None:intergenic |
| AAATTTGATGACAGGGAGCA+CGG | 0.585765 | 7.2:+3843512 | MS.gene29345:CDS |
| AGGACCGGTTTGATTTGTTG+AGG | 0.591868 | 7.2:+3840471 | MS.gene29345:CDS |
| AGGTGGAATTTGTGCATCCG+TGG | 0.592128 | 7.2:+3840267 | MS.gene29345:CDS |
| AAAGATGGAAAGTCTGGTGG+TGG | 0.592319 | 7.2:+3843062 | MS.gene29345:CDS |
| TCTGCCTTTCCTTCTCTGGT+CGG | 0.592904 | 7.2:-3842889 | None:intergenic |
| TAAGATGGGCAGTCGGCAAG+AGG | 0.595204 | 7.2:+3842320 | MS.gene29345:CDS |
| CTCGAGGAAATGACCGGAGT+AGG | 0.595253 | 7.2:+3843486 | MS.gene29345:CDS |
| ACACGTCTCTTTGGAGTAGG+AGG | 0.598857 | 7.2:-3841537 | None:intergenic |
| CCTACTCCAAAGAGACGTGT+TGG | 0.599442 | 7.2:+3841540 | MS.gene29345:CDS |
| GGTAATGACAGAGGGTCTCA+GGG | 0.600104 | 7.2:+3843221 | MS.gene29345:CDS |
| GGTAATGACAGAGGGTCTCA+GGG | 0.600104 | 7.2:+3843389 | MS.gene29345:CDS |
| CTTGAATTACAGAAGGAATG+TGG | 0.602047 | 7.2:+3842206 | MS.gene29345:CDS |
| TAAAATTAACAGCCAACCTG+TGG | 0.604873 | 7.2:+3840229 | MS.gene29345:CDS |
| GCTGCCGACCAGAGAAGGAA+AGG | 0.607141 | 7.2:+3842885 | MS.gene29345:CDS |
| GAAGTAACCGTGATAAGAAG+AGG | 0.607183 | 7.2:+3843162 | MS.gene29345:CDS |
| AGAAATGCTAGAGGGTCTCA+GGG | 0.608421 | 7.2:+3843140 | MS.gene29345:CDS |
| ACAGACATGATTCTGGGAGA+AGG | 0.609668 | 7.2:+3843030 | MS.gene29345:CDS |
| ATAACAATGCTCGGCATGTG+GGG | 0.609933 | 7.2:+3842451 | MS.gene29345:CDS |
| CATCAAATCTCTTCCGACCA+CGG | 0.613295 | 7.2:-3843418 | None:intergenic |
| TTGATTTCAGGTCGTTGTCG+AGG | 0.613354 | 7.2:+3840716 | MS.gene29345:intron |
| AATCTTATGGCAATGACAGA+GGG | 0.614862 | 7.2:+3843297 | MS.gene29345:CDS |
| AATCTTATGGGAATGATAGA+GGG | 0.615135 | 7.2:+3843462 | MS.gene29345:CDS |
| TTTCCAGGAATTCATCAGGT+GGG | 0.615174 | 7.2:-3842254 | None:intergenic |
| AATCTTATGGTAATGACAGA+GGG | 0.617707 | 7.2:+3843213 | MS.gene29345:CDS |
| AATCTTATGGTAATGACAGA+GGG | 0.617707 | 7.2:+3843381 | MS.gene29345:CDS |
| ATGCCCCAATGTGGACAGAA+AGG | 0.622449 | 7.2:+3840768 | MS.gene29345:CDS |
| CATTAACATATTCGTCATCG+TGG | 0.624458 | 7.2:-3842515 | None:intergenic |
| GATGATGTTGAGATGAAAAG+GGG | 0.632277 | 7.2:+3841567 | MS.gene29345:CDS |
| ACTAAAGATGGAAAGTCTGG+TGG | 0.633614 | 7.2:+3843059 | MS.gene29345:CDS |
| ACTTTAATAAGATGGGCAGT+CGG | 0.636668 | 7.2:+3842313 | MS.gene29345:CDS |
| CCCCAATGTGGACAGAAAGG+TGG | 0.638533 | 7.2:+3840771 | MS.gene29345:CDS |
| GCAGAAGTCTGTTAAAGCAG+TGG | 0.639008 | 7.2:+3841410 | MS.gene29345:CDS |
| AGTTGAGAAATGGAAGAATG+GGG | 0.640454 | 7.2:-3839967 | None:intergenic |
| CCACCTTTCTGTCCACATTG+GGG | 0.641456 | 7.2:-3840771 | None:intergenic |
| AAATCTTATGGCAATGACAG+AGG | 0.643025 | 7.2:+3843296 | MS.gene29345:CDS |
| TAGGCAGAAATTTGATGACA+GGG | 0.644055 | 7.2:+3843505 | MS.gene29345:CDS |
| ATTAACATATTCGTCATCGT+GGG | 0.644202 | 7.2:-3842514 | None:intergenic |
| CAAACAAAGAGGACGAGGCA+CGG | 0.646878 | 7.2:+3841304 | MS.gene29345:CDS |
| TGTGGAATTGGTGAAGAAAG+AGG | 0.646891 | 7.2:+3840247 | MS.gene29345:CDS |
| GTTCTAGGTCTAGAAGGACC+GGG | 0.647939 | 7.2:-3842543 | None:intergenic |
| TTATCTGCTTACAAACAAAG+AGG | 0.648918 | 7.2:+3841293 | MS.gene29345:CDS |
| CAGTCTTATAGAAATGCTAG+AGG | 0.651109 | 7.2:+3843131 | MS.gene29345:CDS |
| TTTGATGACAATGAATCAGA+TGG | 0.653290 | 7.2:+3842366 | MS.gene29345:CDS |
| GGGAATGATAGAGGGTCTCG+AGG | 0.653470 | 7.2:+3843470 | MS.gene29345:CDS |
| TGATGTTGAGATGAAAAGGG+GGG | 0.656571 | 7.2:+3841569 | MS.gene29345:CDS |
| GATGACGAATATGTTAATGC+CGG | 0.658800 | 7.2:+3842519 | MS.gene29345:CDS |
| GCTTACAAACAAAGAGGACG+AGG | 0.663787 | 7.2:+3841299 | MS.gene29345:CDS |
| AAATCTTATGGTAATGACAG+AGG | 0.664418 | 7.2:+3843212 | MS.gene29345:CDS |
| AAATCTTATGGTAATGACAG+AGG | 0.664418 | 7.2:+3843380 | MS.gene29345:CDS |
| CGAAGAATAGGAGCGTCCCA+GGG | 0.664768 | 7.2:+3842490 | MS.gene29345:CDS |
| GTCCTTCTAGACCTAGAACA+GGG | 0.666093 | 7.2:+3842547 | MS.gene29345:CDS |
| TACAGTATGGATGAGAAGGG+TGG | 0.669176 | 7.2:+3843554 | MS.gene29345:CDS |
| ATGATGTTGAGATGAAAAGG+GGG | 0.672376 | 7.2:+3841568 | MS.gene29345:CDS |
| AGATTCTCATGGTATAGACA+AGG | 0.676876 | 7.2:+3842416 | MS.gene29345:CDS |
| ATTATGATTCTGATGAACAG+CGG | 0.679445 | 7.2:+3842826 | MS.gene29345:CDS |
| AGTCTTATAGAAATGCTAGA+GGG | 0.683962 | 7.2:+3843132 | MS.gene29345:CDS |
| TTACATCTCCTTCATCCAGG+TGG | 0.684945 | 7.2:-3840825 | None:intergenic |
| GCATTTCTATAAGACTGCCG+GGG | 0.703378 | 7.2:-3843125 | None:intergenic |
| GGGTCTCAGGGAAGTAACCG+TGG | 0.707185 | 7.2:+3843401 | MS.gene29345:CDS |
| GGAATTGGTGAAGAAAGAGG+TGG | 0.708417 | 7.2:+3840250 | MS.gene29345:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAGTTTAATAAATACAGTA+TGG | + | chr7.2:3843541-3843560 | MS.gene29345:CDS | 20.0% |
| !! | ATAATGAGAAAAATATGCTT+CGG | - | chr7.2:3841194-3841213 | None:intergenic | 20.0% |
| !! | TACAAAAATTCATTGATATC+AGG | + | chr7.2:3841230-3841249 | MS.gene29345:intron | 20.0% |
| !! | TAGCAAAATCTAACAATATT+TGG | - | chr7.2:3842137-3842156 | None:intergenic | 20.0% |
| !!! | AATTTGGTTATGAGTATTTT+TGG | - | chr7.2:3840126-3840145 | None:intergenic | 20.0% |
| !!! | ATCAGAATTATTTTGATCAT+AGG | + | chr7.2:3840324-3840343 | MS.gene29345:CDS | 20.0% |
| !!! | TAACTAAGTTGAATTCATTT+TGG | + | chr7.2:3840509-3840528 | MS.gene29345:intron | 20.0% |
| !!! | TATTGTTCTGTTTTACATAT+GGG | + | chr7.2:3840629-3840648 | MS.gene29345:intron | 20.0% |
| !!! | TGAGTTGTTTATTTTTTATC+TGG | + | chr7.2:3842171-3842190 | MS.gene29345:intron | 20.0% |
| !!! | TTATTGTTCTGTTTTACATA+TGG | + | chr7.2:3840628-3840647 | MS.gene29345:intron | 20.0% |
| ! | AATAAAAGTAAAACAGCTTC+TGG | + | chr7.2:3842735-3842754 | MS.gene29345:CDS | 25.0% |
| ! | ACAATTCACAAGTAATGAAT+AGG | + | chr7.2:3840954-3840973 | MS.gene29345:intron | 25.0% |
| ! | AGAATCTGCATATTCAAAAT+TGG | - | chr7.2:3842403-3842422 | None:intergenic | 25.0% |
| ! | AGAGTAACATAATGATATTG+TGG | + | chr7.2:3840602-3840621 | MS.gene29345:intron | 25.0% |
| ! | GTATATCATTAACTACCAAA+AGG | - | chr7.2:3841832-3841851 | None:intergenic | 25.0% |
| ! | GTGTAGCAAACATAATAAAT+TGG | - | chr7.2:3841726-3841745 | None:intergenic | 25.0% |
| ! | TAATGAGAAAAATATGCTTC+GGG | - | chr7.2:3841193-3841212 | None:intergenic | 25.0% |
| ! | TATACTATTAGACGTCAAAT+TGG | + | chr7.2:3841847-3841866 | MS.gene29345:intron | 25.0% |
| ! | TCATTACTTGTGAATTGTAA+TGG | - | chr7.2:3840952-3840971 | None:intergenic | 25.0% |
| ! | TTAAGTCCATTTAATGTTCT+GGG | + | chr7.2:3842056-3842075 | MS.gene29345:intron | 25.0% |
| ! | TTTAAGTCCATTTAATGTTC+TGG | + | chr7.2:3842055-3842074 | MS.gene29345:intron | 25.0% |
| !! | ATGAATGATTGATTGATTTC+AGG | + | chr7.2:3840704-3840723 | MS.gene29345:intron | 25.0% |
| !! | ATTGTTCTGTTTTACATATG+GGG | + | chr7.2:3840630-3840649 | MS.gene29345:intron | 25.0% |
| !! | TAAATGGACTTAAACTTACT+CGG | - | chr7.2:3842049-3842068 | None:intergenic | 25.0% |
| !!! | AAGAGATTTGATGATTTTGA+TGG | + | chr7.2:3843428-3843447 | MS.gene29345:CDS | 25.0% |
| !!! | AAGTTGATTCATTGTTGTTT+TGG | + | chr7.2:3840899-3840918 | MS.gene29345:intron | 25.0% |
| !!! | AGAATTATTTTGATCATAGG+AGG | + | chr7.2:3840327-3840346 | MS.gene29345:CDS | 25.0% |
| !!! | ATTTTGGTTGTTGAATTTGT+TGG | + | chr7.2:3840525-3840544 | MS.gene29345:intron | 25.0% |
| !!! | ATTTTTTCTGTTTCTCCTTT+TGG | + | chr7.2:3841814-3841833 | MS.gene29345:intron | 25.0% |
| !!! | GACATGATTTGTTTTTATCT+GGG | - | chr7.2:3842112-3842131 | None:intergenic | 25.0% |
| !!! | TATCTTGAGTTTTATTTTCC+AGG | - | chr7.2:3842272-3842291 | None:intergenic | 25.0% |
| !!! | TGACATGATTTGTTTTTATC+TGG | - | chr7.2:3842113-3842132 | None:intergenic | 25.0% |
| !!! | TTGTTTATTTTTTATCTGGC+AGG | + | chr7.2:3842175-3842194 | MS.gene29345:intron | 25.0% |
| !!! | TTTTCTCTGGAAAACTTTTA+AGG | + | chr7.2:3840794-3840813 | MS.gene29345:CDS | 25.0% |
| !!! | TTTTGGTTGTTGAATTTGTT+GGG | + | chr7.2:3840526-3840545 | MS.gene29345:intron | 25.0% |
| AAATACAGTATGGATGAGAA+GGG | + | chr7.2:3843551-3843570 | MS.gene29345:CDS | 30.0% | |
| AAATCTTATGGGAATGATAG+AGG | + | chr7.2:3843461-3843480 | MS.gene29345:CDS | 30.0% | |
| AAGTTGAGAAATGGAAGAAT+GGG | - | chr7.2:3839971-3839990 | None:intergenic | 30.0% | |
| AATAAGAAAGATCGCAAAAG+AGG | - | chr7.2:3841154-3841173 | None:intergenic | 30.0% | |
| AATCTTATGGGAATGATAGA+GGG | + | chr7.2:3843462-3843481 | MS.gene29345:CDS | 30.0% | |
| AGAACAATCAAATCAATCTC+AGG | - | chr7.2:3841075-3841094 | None:intergenic | 30.0% | |
| AGAACCAAAGCTTAATTTCT+TGG | - | chr7.2:3842922-3842941 | None:intergenic | 30.0% | |
| AGAAGGAACTTTACTAAAGA+TGG | + | chr7.2:3843047-3843066 | MS.gene29345:CDS | 30.0% | |
| ATAAAATGGTGCAGGATTTA+GGG | + | chr7.2:3840360-3840379 | MS.gene29345:CDS | 30.0% | |
| ATAAGAAAGATCGCAAAAGA+GGG | - | chr7.2:3841153-3841172 | None:intergenic | 30.0% | |
| ATAATCAAGTTCATCTTCCT+TGG | - | chr7.2:3842811-3842830 | None:intergenic | 30.0% | |
| ATTAACATATTCGTCATCGT+GGG | - | chr7.2:3842517-3842536 | None:intergenic | 30.0% | |
| ATTATGATTCTGATGAACAG+CGG | + | chr7.2:3842826-3842845 | MS.gene29345:CDS | 30.0% | |
| ATTCATCCAGGCAAAATAAA+GGG | + | chr7.2:3843006-3843025 | MS.gene29345:CDS | 30.0% | |
| ATTTAGCATCTTCAGTTAAG+AGG | - | chr7.2:3841922-3841941 | None:intergenic | 30.0% | |
| GGACCTAACTTTAATAAGAT+GGG | + | chr7.2:3842306-3842325 | MS.gene29345:CDS | 30.0% | |
| TAAATACAGTATGGATGAGA+AGG | + | chr7.2:3843550-3843569 | MS.gene29345:CDS | 30.0% | |
| TAAGTCCATTTAATGTTCTG+GGG | + | chr7.2:3842057-3842076 | MS.gene29345:intron | 30.0% | |
| TATTCATCCAGGCAAAATAA+AGG | + | chr7.2:3843005-3843024 | MS.gene29345:CDS | 30.0% | |
| TGAAGATGATGACTTAAATG+AGG | + | chr7.2:3842980-3842999 | MS.gene29345:CDS | 30.0% | |
| TGGACCTAACTTTAATAAGA+TGG | + | chr7.2:3842305-3842324 | MS.gene29345:CDS | 30.0% | |
| TGTCATTACCATAAGATTTC+CGG | - | chr7.2:3843211-3843230 | None:intergenic | 30.0% | |
| TTATCTGCTTACAAACAAAG+AGG | + | chr7.2:3841293-3841312 | MS.gene29345:CDS | 30.0% | |
| TTTACTAAAGATGGAAAGTC+TGG | + | chr7.2:3843056-3843075 | MS.gene29345:CDS | 30.0% | |
| TTTCTTCAGATAACAATGCT+CGG | + | chr7.2:3842442-3842461 | MS.gene29345:CDS | 30.0% | |
| TTTGAATATGCAGATTCTCA+TGG | + | chr7.2:3842405-3842424 | MS.gene29345:CDS | 30.0% | |
| ! | AAATCTTATGGTAATGACAG+AGG | + | chr7.2:3843212-3843231 | MS.gene29345:CDS | 30.0% |
| ! | AAGATGATTTTGCGAAGAAT+AGG | + | chr7.2:3842478-3842497 | MS.gene29345:CDS | 30.0% |
| ! | AATCTTATGGTAATGACAGA+GGG | + | chr7.2:3843213-3843232 | MS.gene29345:CDS | 30.0% |
| ! | AGTCTTATAGAAATGCTAGA+GGG | + | chr7.2:3843132-3843151 | MS.gene29345:CDS | 30.0% |
| ! | CAAGATAAAAAGTACAGTTC+TGG | + | chr7.2:3842285-3842304 | MS.gene29345:CDS | 30.0% |
| ! | CTTTTGCGATCTTTCTTATT+TGG | + | chr7.2:3841154-3841173 | MS.gene29345:intron | 30.0% |
| ! | GAAGATGCTAAATACTTTTC+AGG | + | chr7.2:3841929-3841948 | MS.gene29345:intron | 30.0% |
| ! | TTATTTTCCAGGAATTCATC+AGG | - | chr7.2:3842261-3842280 | None:intergenic | 30.0% |
| ! | TTCAGAAACAGAAGACTTTT+TGG | + | chr7.2:3842668-3842687 | MS.gene29345:CDS | 30.0% |
| ! | TTGAAGAGTTTCGTGTTTTT+GGG | - | chr7.2:3840081-3840100 | None:intergenic | 30.0% |
| ! | TTGTTCTGTTTTACATATGG+GGG | + | chr7.2:3840631-3840650 | MS.gene29345:intron | 30.0% |
| ! | TTTGATGACAATGAATCAGA+TGG | + | chr7.2:3842366-3842385 | MS.gene29345:CDS | 30.0% |
| !! | AAGAGGTTTGATGATTTTGA+TGG | + | chr7.2:3843179-3843198 | MS.gene29345:CDS | 30.0% |
| !! | AGGAATTTTGTTTGAGATGA+TGG | + | chr7.2:3840974-3840993 | MS.gene29345:intron | 30.0% |
| !! | CAAGTGTCTATATTTGTTGT+CGG | + | chr7.2:3841039-3841058 | MS.gene29345:intron | 30.0% |
| !! | TGAAGGGTTTGATTTTACTA+AGG | + | chr7.2:3840409-3840428 | MS.gene29345:CDS | 30.0% |
| !! | TGAGATTGATTTGATTGTTC+TGG | + | chr7.2:3841074-3841093 | MS.gene29345:intron | 30.0% |
| !!! | ATGATTTGTTTTTATCTGGG+AGG | - | chr7.2:3842109-3842128 | None:intergenic | 30.0% |
| !!! | ATTCAAGTTTTGGTTGGTTT+TGG | + | chr7.2:3840745-3840764 | MS.gene29345:CDS | 30.0% |
| !!! | TGATTTGTTTTTATCTGGGA+GGG | - | chr7.2:3842108-3842127 | None:intergenic | 30.0% |
| !!! | TTATTTTGATCATAGGAGGA+AGG | + | chr7.2:3840331-3840350 | MS.gene29345:CDS | 30.0% |
| AAAGTCAAAATTCCAGGCAT+TGG | - | chr7.2:3842349-3842368 | None:intergenic | 35.0% | |
| AAATCATCAAACCCTGTTCT+AGG | - | chr7.2:3842561-3842580 | None:intergenic | 35.0% | |
| AAATCTTATGGCAATGACAG+AGG | + | chr7.2:3843296-3843315 | MS.gene29345:CDS | 35.0% | |
| AATCTTATGGCAATGACAGA+GGG | + | chr7.2:3843297-3843316 | MS.gene29345:CDS | 35.0% | |
| ACTTTAATAAGATGGGCAGT+CGG | + | chr7.2:3842313-3842332 | MS.gene29345:CDS | 35.0% | |
| AGATTCTCATGGTATAGACA+AGG | + | chr7.2:3842416-3842435 | MS.gene29345:CDS | 35.0% | |
| AGGACTGATGATCCATTAAT+AGG | - | chr7.2:3841372-3841391 | None:intergenic | 35.0% | |
| AGTAAATCACAGAGATTCCA+AGG | - | chr7.2:3841617-3841636 | None:intergenic | 35.0% | |
| AGTTGAGAAATGGAAGAATG+GGG | - | chr7.2:3839970-3839989 | None:intergenic | 35.0% | |
| ATGATGTTGAGATGAAAAGG+GGG | + | chr7.2:3841568-3841587 | MS.gene29345:CDS | 35.0% | |
| ATGTATTCTTGCGAACTGAA+CGG | - | chr7.2:3842776-3842795 | None:intergenic | 35.0% | |
| CATACCTCAACAAATCAAAC+CGG | - | chr7.2:3840478-3840497 | None:intergenic | 35.0% | |
| CATCAAACCTCTTCTTATCA+CGG | - | chr7.2:3843172-3843191 | None:intergenic | 35.0% | |
| CATTAACATATTCGTCATCG+TGG | - | chr7.2:3842518-3842537 | None:intergenic | 35.0% | |
| CCAAAGCTTAATTTCTTGGT+TGG | - | chr7.2:3842918-3842937 | None:intergenic | 35.0% | |
| CCAACCAAGAAATTAAGCTT+TGG | + | chr7.2:3842915-3842934 | MS.gene29345:CDS | 35.0% | |
| CTGAGATTGTACATGATGAA+GGG | + | chr7.2:3840393-3840412 | MS.gene29345:CDS | 35.0% | |
| CTGCCCATCTTATTAAAGTT+AGG | - | chr7.2:3842312-3842331 | None:intergenic | 35.0% | |
| CTTGAATTACAGAAGGAATG+TGG | + | chr7.2:3842206-3842225 | MS.gene29345:CDS | 35.0% | |
| CTTGGGTTTGATCCTATTAA+TGG | + | chr7.2:3841357-3841376 | MS.gene29345:CDS | 35.0% | |
| GAAGTTGAGAAATGGAAGAA+TGG | - | chr7.2:3839972-3839991 | None:intergenic | 35.0% | |
| GAGGAAGGATGAAGATAAAA+TGG | + | chr7.2:3840346-3840365 | MS.gene29345:CDS | 35.0% | |
| GATAAAATGGTGCAGGATTT+AGG | + | chr7.2:3840359-3840378 | MS.gene29345:CDS | 35.0% | |
| GATGACGAATATGTTAATGC+CGG | + | chr7.2:3842519-3842538 | MS.gene29345:CDS | 35.0% | |
| GATGATGTTGAGATGAAAAG+GGG | + | chr7.2:3841567-3841586 | MS.gene29345:CDS | 35.0% | |
| GATTCAATTGATGGAGAGAT+TGG | + | chr7.2:3840298-3840317 | MS.gene29345:CDS | 35.0% | |
| GCAACTTCTTGAATTACAGA+AGG | + | chr7.2:3842199-3842218 | MS.gene29345:CDS | 35.0% | |
| GGATGATGTTGAGATGAAAA+GGG | + | chr7.2:3841566-3841585 | MS.gene29345:CDS | 35.0% | |
| GGCTACAAATCAAACATGTT+CGG | + | chr7.2:3843083-3843102 | MS.gene29345:CDS | 35.0% | |
| GTCATCAAAGTCAAAATTCC+AGG | - | chr7.2:3842355-3842374 | None:intergenic | 35.0% | |
| GTCATTACCATAAGATTTCC+GGG | - | chr7.2:3843210-3843229 | None:intergenic | 35.0% | |
| TAAAATTAACAGCCAACCTG+TGG | + | chr7.2:3840229-3840248 | MS.gene29345:CDS | 35.0% | |
| TAAATGAGGCATATTCATCC+AGG | + | chr7.2:3842994-3843013 | MS.gene29345:CDS | 35.0% | |
| TAAGAAAGATCGCAAAAGAG+GGG | - | chr7.2:3841152-3841171 | None:intergenic | 35.0% | |
| TAGCATTTCTATAAGACTGC+CGG | - | chr7.2:3843130-3843149 | None:intergenic | 35.0% | |
| TATGAGCTAGAAACTGAAAC+AGG | + | chr7.2:3842606-3842625 | MS.gene29345:CDS | 35.0% | |
| TCAACCAAAAAAAGTTCACC+TGG | - | chr7.2:3841757-3841776 | None:intergenic | 35.0% | |
| TCCATCAATTGAATCCATTC+CGG | - | chr7.2:3840293-3840312 | None:intergenic | 35.0% | |
| TGTAACCCCAGAACATTAAA+TGG | - | chr7.2:3842065-3842084 | None:intergenic | 35.0% | |
| TGTCATTGCCATAAGATTTC+CGG | - | chr7.2:3843295-3843314 | None:intergenic | 35.0% | |
| ! | AAACAGAAGACTTTTTGGAC+TGG | + | chr7.2:3842673-3842692 | MS.gene29345:CDS | 35.0% |
| ! | AAATGGAAGAATGGGGTTTT+AGG | - | chr7.2:3839963-3839982 | None:intergenic | 35.0% |
| ! | AACAGAAGACTTTTTGGACT+GGG | + | chr7.2:3842674-3842693 | MS.gene29345:CDS | 35.0% |
| ! | AATGGAAGAATGGGGTTTTA+GGG | - | chr7.2:3839962-3839981 | None:intergenic | 35.0% |
| ! | ATGCTGCTTGTCTTAATTTC+GGG | + | chr7.2:3840447-3840466 | MS.gene29345:CDS | 35.0% |
| ! | ATTATGTTTGCTACACCATG+TGG | + | chr7.2:3841730-3841749 | MS.gene29345:intron | 35.0% |
| ! | CAGTCTTATAGAAATGCTAG+AGG | + | chr7.2:3843131-3843150 | MS.gene29345:CDS | 35.0% |
| ! | CATGCTGCTTGTCTTAATTT+CGG | + | chr7.2:3840446-3840465 | MS.gene29345:CDS | 35.0% |
| ! | GTTGAAGAGTTTCGTGTTTT+TGG | - | chr7.2:3840082-3840101 | None:intergenic | 35.0% |
| ! | TAGGCAGAAATTTGATGACA+GGG | + | chr7.2:3843505-3843524 | MS.gene29345:CDS | 35.0% |
| ! | TCTGAGATTGTACATGATGA+AGG | + | chr7.2:3840392-3840411 | MS.gene29345:CDS | 35.0% |
| !! | AACAGGGTTTGATGATTTTG+AGG | + | chr7.2:3842563-3842582 | MS.gene29345:CDS | 35.0% |
| !! | AAGCGGTTTGATGATTTTGA+TGG | + | chr7.2:3843260-3843279 | MS.gene29345:CDS | 35.0% |
| !! | ATGATTTTGATGAATCACCC+CGG | + | chr7.2:3843108-3843127 | MS.gene29345:CDS | 35.0% |
| !! | ATGATTTTGATGGATCATCC+CGG | + | chr7.2:3843189-3843208 | MS.gene29345:CDS | 35.0% |
| !! | ATGATTTTGATGGATCGTCT+CGG | + | chr7.2:3843438-3843457 | MS.gene29345:CDS | 35.0% |
| !! | ATTTTGATGGATCATCATCC+CGG | + | chr7.2:3843273-3843292 | MS.gene29345:CDS | 35.0% |
| !! | CAGGATATTCAAGTTTTGGT+TGG | + | chr7.2:3840739-3840758 | MS.gene29345:CDS | 35.0% |
| !! | CGATCTTTCTTATTTGGTGT+TGG | + | chr7.2:3841160-3841179 | MS.gene29345:intron | 35.0% |
| !! | GCAGTGATTTTAGAAACAGT+AGG | + | chr7.2:3843576-3843595 | MS.gene29345:CDS | 35.0% |
| !! | GTTTGATGATTTTGAGGAAG+AGG | + | chr7.2:3842569-3842588 | MS.gene29345:CDS | 35.0% |
| !! | GTTTGATTTGTTGAGGTATG+TGG | + | chr7.2:3840478-3840497 | MS.gene29345:intron | 35.0% |
| !! | TGATTCTGAAACAGGTTGTT+CGG | - | chr7.2:3840150-3840169 | None:intergenic | 35.0% |
| !!! | GATTTGTTTTTATCTGGGAG+GGG | - | chr7.2:3842107-3842126 | None:intergenic | 35.0% |
| !!! | TAATTGTTTTGAGCACCGAA+TGG | - | chr7.2:3840865-3840884 | None:intergenic | 35.0% |
| AAACAGGTTGTTCGGGAATT+TGG | - | chr7.2:3840142-3840161 | None:intergenic | 40.0% | |
| AAAGGGAACAGACATGATTC+TGG | + | chr7.2:3843023-3843042 | MS.gene29345:CDS | 40.0% | |
| AAGGGAACAGACATGATTCT+GGG | + | chr7.2:3843024-3843043 | MS.gene29345:CDS | 40.0% | |
| ACAGACTTCTGCTTCAAAAG+TGG | - | chr7.2:3841402-3841421 | None:intergenic | 40.0% | |
| ACTAAAGATGGAAAGTCTGG+TGG | + | chr7.2:3843059-3843078 | MS.gene29345:CDS | 40.0% | |
| AGCATTTCTATAAGACTGCC+GGG | - | chr7.2:3843129-3843148 | None:intergenic | 40.0% | |
| AGCTTCCATTCTTGAACTAC+TGG | - | chr7.2:3842634-3842653 | None:intergenic | 40.0% | |
| AGGAACCAGTAGTTCAAGAA+TGG | + | chr7.2:3842626-3842645 | MS.gene29345:CDS | 40.0% | |
| CAGAGAGAGAAGAAGGTTTA+GGG | - | chr7.2:3840007-3840026 | None:intergenic | 40.0% | |
| CATCAAATTTCTGCCTACTC+CGG | - | chr7.2:3843502-3843521 | None:intergenic | 40.0% | |
| CTAGAACTTGACATGCACTT+TGG | - | chr7.2:3841672-3841691 | None:intergenic | 40.0% | |
| CTATGTCCAAAGTATGTCCT+TGG | + | chr7.2:3841597-3841616 | MS.gene29345:intron | 40.0% | |
| GAAGTAACCGTGATAAGAAG+AGG | + | chr7.2:3843162-3843181 | MS.gene29345:CDS | 40.0% | |
| GAATTAACGATGCCTATCAG+TGG | - | chr7.2:3841784-3841803 | None:intergenic | 40.0% | |
| GAGACAAGATTCAAATCCTC+CGG | - | chr7.2:3841003-3841022 | None:intergenic | 40.0% | |
| GAGATTCCAAGGACATACTT+TGG | - | chr7.2:3841606-3841625 | None:intergenic | 40.0% | |
| GATCGTCTCGGAAATCTTAT+GGG | + | chr7.2:3843450-3843469 | MS.gene29345:CDS | 40.0% | |
| GGATGAAGATAAAATGGTGC+AGG | + | chr7.2:3840352-3840371 | MS.gene29345:CDS | 40.0% | |
| GGGATGATGTTGAGATGAAA+AGG | + | chr7.2:3841565-3841584 | MS.gene29345:CDS | 40.0% | |
| GTCATTGCCATAAGATTTCC+GGG | - | chr7.2:3843294-3843313 | None:intergenic | 40.0% | |
| TACATCTTTCTCTCGATCCA+AGG | + | chr7.2:3842791-3842810 | MS.gene29345:CDS | 40.0% | |
| TCATCATCCCGGAAATCTTA+TGG | + | chr7.2:3843284-3843303 | MS.gene29345:CDS | 40.0% | |
| TCTTTCTTCACCAATTCCAC+AGG | - | chr7.2:3840248-3840267 | None:intergenic | 40.0% | |
| TGATGTTGAGATGAAAAGGG+GGG | + | chr7.2:3841569-3841588 | MS.gene29345:CDS | 40.0% | |
| TGCTTGTCTTAATTTCGGGA+AGG | + | chr7.2:3840451-3840470 | MS.gene29345:CDS | 40.0% | |
| TGTATTCTTGCGAACTGAAC+GGG | - | chr7.2:3842775-3842794 | None:intergenic | 40.0% | |
| TGTGGAATTGGTGAAGAAAG+AGG | + | chr7.2:3840247-3840266 | MS.gene29345:CDS | 40.0% | |
| TTGGTTGACAAACCACTGAT+AGG | + | chr7.2:3841769-3841788 | MS.gene29345:intron | 40.0% | |
| TTTCCAGGAATTCATCAGGT+GGG | - | chr7.2:3842257-3842276 | None:intergenic | 40.0% | |
| ! | AAATTTGATGACAGGGAGCA+CGG | + | chr7.2:3843512-3843531 | MS.gene29345:CDS | 40.0% |
| ! | ACAATTGTTTCTCAAGCTGC+AGG | - | chr7.2:3841265-3841284 | None:intergenic | 40.0% |
| ! | AGAGAAGAAGGTTTAGGGTT+TGG | - | chr7.2:3840002-3840021 | None:intergenic | 40.0% |
| ! | GACGAAGATGTTGTTGTTGT+TGG | - | chr7.2:3840188-3840207 | None:intergenic | 40.0% |
| ! | GAGAAGAAGGTTTAGGGTTT+GGG | - | chr7.2:3840001-3840020 | None:intergenic | 40.0% |
| ! | GATGTTGTTGTTGTTGGTGA+TGG | - | chr7.2:3840182-3840201 | None:intergenic | 40.0% |
| ! | GTAGGCAGAAATTTGATGAC+AGG | + | chr7.2:3843504-3843523 | MS.gene29345:CDS | 40.0% |
| ! | TTTTCCAGGAATTCATCAGG+TGG | - | chr7.2:3842258-3842277 | None:intergenic | 40.0% |
| !! | AAGGTTTAGGGTTTGGGTTT+TGG | - | chr7.2:3839995-3840014 | None:intergenic | 40.0% |
| !! | AGGTTTAGGGTTTGGGTTTT+GGG | - | chr7.2:3839994-3840013 | None:intergenic | 40.0% |
| !! | ATATTTGTTGTCGGTGGCAA+AGG | + | chr7.2:3841048-3841067 | MS.gene29345:intron | 40.0% |
| !! | ATTTTGATGGATCGTCATCC+CGG | + | chr7.2:3843357-3843376 | MS.gene29345:CDS | 40.0% |
| !! | GAGGCAGGATATTCAAGTTT+TGG | + | chr7.2:3840735-3840754 | MS.gene29345:CDS | 40.0% |
| !! | GATTCTGAAACAGGTTGTTC+GGG | - | chr7.2:3840149-3840168 | None:intergenic | 40.0% |
| !! | GTGTCTATATTTGTTGTCGG+TGG | + | chr7.2:3841042-3841061 | MS.gene29345:intron | 40.0% |
| !! | TTGTTTGAGATGATGGAAGC+CGG | + | chr7.2:3840981-3841000 | MS.gene29345:intron | 40.0% |
| !!! | GGTTTTGGGAAGTTGAGAAA+TGG | - | chr7.2:3839980-3839999 | None:intergenic | 40.0% |
| !!! | TCTGTTCCCTTTATTTTGCC+TGG | - | chr7.2:3843015-3843034 | None:intergenic | 40.0% |
| !!! | TGGACCAGGTGAACTTTTTT+TGG | + | chr7.2:3841750-3841769 | MS.gene29345:intron | 40.0% |
| AAAAGTTCACCTGGTCCACA+TGG | - | chr7.2:3841748-3841767 | None:intergenic | 45.0% | |
| AAAGATGGAAAGTCTGGTGG+TGG | + | chr7.2:3843062-3843081 | MS.gene29345:CDS | 45.0% | |
| AACCACCTTTCTGTCCACAT+TGG | - | chr7.2:3840776-3840795 | None:intergenic | 45.0% | |
| AATTGAATCCATTCCGGCCA+CGG | - | chr7.2:3840287-3840306 | None:intergenic | 45.0% | |
| ACAGTTGCTTCCAGGAGAAT+GGG | + | chr7.2:3842017-3842036 | MS.gene29345:CDS | 45.0% | |
| ACCACCTTTCTGTCCACATT+GGG | - | chr7.2:3840775-3840794 | None:intergenic | 45.0% | |
| AGAAATGCTAGAGGGTCTCA+GGG | + | chr7.2:3843140-3843159 | MS.gene29345:CDS | 45.0% | |
| AGATAACAATGCTCGGCATG+TGG | + | chr7.2:3842449-3842468 | MS.gene29345:CDS | 45.0% | |
| AGTGTAACACGCATGCCATT+CGG | + | chr7.2:3840847-3840866 | MS.gene29345:intron | 45.0% | |
| ATAACAATGCTCGGCATGTG+GGG | + | chr7.2:3842451-3842470 | MS.gene29345:CDS | 45.0% | |
| ATGCGAATGCTACTGACACT+TGG | + | chr7.2:3841339-3841358 | MS.gene29345:CDS | 45.0% | |
| CACTTACATCTCCTTCATCC+AGG | - | chr7.2:3840831-3840850 | None:intergenic | 45.0% | |
| CATCAAATCTCTTCCGACCA+CGG | - | chr7.2:3843421-3843440 | None:intergenic | 45.0% | |
| CTCTTCAACGAATTCGTGCT+TGG | + | chr7.2:3840093-3840112 | MS.gene29345:CDS | 45.0% | |
| GAACTTGACATGCACTTTGG+TGG | - | chr7.2:3841669-3841688 | None:intergenic | 45.0% | |
| GAATATGTTAATGCCGGTCC+CGG | + | chr7.2:3842525-3842544 | MS.gene29345:CDS | 45.0% | |
| GACAGATGCGAGTGAGATAA+TGG | - | chr7.2:3841111-3841130 | None:intergenic | 45.0% | |
| GATAACAATGCTCGGCATGT+GGG | + | chr7.2:3842450-3842469 | MS.gene29345:CDS | 45.0% | |
| GATCAAAAAGCCTCCACCAA+AGG | + | chr7.2:3841503-3841522 | MS.gene29345:CDS | 45.0% | |
| GCAGAAGTCTGTTAAAGCAG+TGG | + | chr7.2:3841410-3841429 | MS.gene29345:CDS | 45.0% | |
| GCAGAGAGAGAAGAAGGTTT+AGG | - | chr7.2:3840008-3840027 | None:intergenic | 45.0% | |
| GCATTTCTATAAGACTGCCG+GGG | - | chr7.2:3843128-3843147 | None:intergenic | 45.0% | |
| GCTTACAAACAAAGAGGACG+AGG | + | chr7.2:3841299-3841318 | MS.gene29345:CDS | 45.0% | |
| GGAATTGGTGAAGAAAGAGG+TGG | + | chr7.2:3840250-3840269 | MS.gene29345:CDS | 45.0% | |
| GGAGGGAGATTTGGATCAAT+AGG | - | chr7.2:3841477-3841496 | None:intergenic | 45.0% | |
| GGATCATCCCGGAAATCTTA+TGG | + | chr7.2:3843200-3843219 | MS.gene29345:CDS | 45.0% | |
| GGATCGTCTCGGAAATCTTA+TGG | + | chr7.2:3843449-3843468 | MS.gene29345:CDS | 45.0% | |
| GTCCTTCTAGACCTAGAACA+GGG | + | chr7.2:3842547-3842566 | MS.gene29345:CDS | 45.0% | |
| GTCTTAATTTCGGGAAGGAC+CGG | + | chr7.2:3840456-3840475 | MS.gene29345:CDS | 45.0% | |
| TAACAGCCAACCTGTGGAAT+TGG | + | chr7.2:3840235-3840254 | MS.gene29345:CDS | 45.0% | |
| TACAGTATGGATGAGAAGGG+TGG | + | chr7.2:3843554-3843573 | MS.gene29345:CDS | 45.0% | |
| TAGAAATGCTAGAGGGTCTC+AGG | + | chr7.2:3843139-3843158 | MS.gene29345:CDS | 45.0% | |
| TCGTCATCCCGGAAATCTTA+TGG | + | chr7.2:3843368-3843387 | MS.gene29345:CDS | 45.0% | |
| TCTTCACCAATTCCACAGGT+TGG | - | chr7.2:3840244-3840263 | None:intergenic | 45.0% | |
| TGCGAATGCTACTGACACTT+GGG | + | chr7.2:3841340-3841359 | MS.gene29345:CDS | 45.0% | |
| TTACATCTCCTTCATCCAGG+TGG | - | chr7.2:3840828-3840847 | None:intergenic | 45.0% | |
| TTTAAGGAAGCTTGTCCACC+TGG | + | chr7.2:3840810-3840829 | MS.gene29345:CDS | 45.0% | |
| ! | AACCCTGTTCTAGGTCTAGA+AGG | - | chr7.2:3842552-3842571 | None:intergenic | 45.0% |
| ! | AAGCTGCTTTGAGTAGTGTG+AGG | + | chr7.2:3841880-3841899 | MS.gene29345:intron | 45.0% |
| ! | ACAGACATGATTCTGGGAGA+AGG | + | chr7.2:3843030-3843049 | MS.gene29345:CDS | 45.0% |
| ! | GACAGAAAGGTGGTTTTCTC+TGG | + | chr7.2:3840781-3840800 | MS.gene29345:CDS | 45.0% |
| ! | GCCGGAATGGATTCAATTGA+TGG | + | chr7.2:3840289-3840308 | MS.gene29345:CDS | 45.0% |
| ! | GCTTTTTGATCACTGGAGGA+GGG | - | chr7.2:3841494-3841513 | None:intergenic | 45.0% |
| ! | TGTTCTAGGTCTAGAAGGAC+CGG | - | chr7.2:3842547-3842566 | None:intergenic | 45.0% |
| ! | TTGATTTCAGGTCGTTGTCG+AGG | + | chr7.2:3840716-3840735 | MS.gene29345:intron | 45.0% |
| !! | AGGACCGGTTTGATTTGTTG+AGG | + | chr7.2:3840471-3840490 | MS.gene29345:CDS | 45.0% |
| !! | GCTTCAAAAGTGGCTTGTTG+AGG | - | chr7.2:3841392-3841411 | None:intergenic | 45.0% |
| !! | GTTGTTGTTGTTGGTGATGG+TGG | - | chr7.2:3840179-3840198 | None:intergenic | 45.0% |
| !! | TGTTTTTATCTGGGAGGGGA+GGG | - | chr7.2:3842103-3842122 | None:intergenic | 45.0% |
| !!! | GGGTTTTAGGGTTTAAGAGC+CGG | - | chr7.2:3839950-3839969 | None:intergenic | 45.0% |
| !!! | TTGTTTTTATCTGGGAGGGG+AGG | - | chr7.2:3842104-3842123 | None:intergenic | 45.0% |
| AAGCTTGTCCACCTGGATGA+AGG | + | chr7.2:3840817-3840836 | MS.gene29345:CDS | 50.0% | |
| AGACGAGCAGAGAGAGAAGA+AGG | - | chr7.2:3840014-3840033 | None:intergenic | 50.0% | |
| AGGTGGAATTTGTGCATCCG+TGG | + | chr7.2:3840267-3840286 | MS.gene29345:CDS | 50.0% | |
| ATCACTGGAGGAGGGAGATT+TGG | - | chr7.2:3841486-3841505 | None:intergenic | 50.0% | |
| ATGCCCCAATGTGGACAGAA+AGG | + | chr7.2:3840768-3840787 | MS.gene29345:CDS | 50.0% | |
| CAAACAAAGAGGACGAGGCA+CGG | + | chr7.2:3841304-3841323 | MS.gene29345:CDS | 50.0% | |
| CATCAAACCGCTTCCGATCA+CGG | - | chr7.2:3843253-3843272 | None:intergenic | 50.0% | |
| CCACCTTTCTGTCCACATTG+GGG | - | chr7.2:3840774-3840793 | None:intergenic | 50.0% | |
| CCTACTCCAAAGAGACGTGT+TGG | + | chr7.2:3841540-3841559 | MS.gene29345:CDS | 50.0% | |
| CCTGGAAGCAACTGTCTCTT+GGG | - | chr7.2:3842012-3842031 | None:intergenic | 50.0% | |
| CTCAGGGAAGTAACCGTGAT+CGG | + | chr7.2:3843156-3843175 | MS.gene29345:CDS | 50.0% | |
| CTCCAAAGAGACGTGTTGGA+CGG | + | chr7.2:3841544-3841563 | MS.gene29345:CDS | 50.0% | |
| CTCTTCTTCTCACCAAACGC+CGG | + | chr7.2:3839928-3839947 | MS.gene29345:CDS | 50.0% | |
| GAAGTAACCGTGATCGGAAG+CGG | + | chr7.2:3843243-3843262 | MS.gene29345:CDS | 50.0% | |
| GACAGTTGCTTCCAGGAGAA+TGG | + | chr7.2:3842016-3842035 | MS.gene29345:CDS | 50.0% | |
| GGTAATGACAGAGGGTCTCA+GGG | + | chr7.2:3843221-3843240 | MS.gene29345:CDS | 50.0% | |
| GGTCCTTCTAGACCTAGAAC+AGG | + | chr7.2:3842546-3842565 | MS.gene29345:CDS | 50.0% | |
| TCCAAAGAGACGTGTTGGAC+GGG | + | chr7.2:3841545-3841564 | MS.gene29345:CDS | 50.0% | |
| TCCTGGAAGCAACTGTCTCT+TGG | - | chr7.2:3842013-3842032 | None:intergenic | 50.0% | |
| TCGGTACATTCCCATTCTCC+TGG | - | chr7.2:3842030-3842049 | None:intergenic | 50.0% | |
| TCTGCCTTTCCTTCTCTGGT+CGG | - | chr7.2:3842892-3842911 | None:intergenic | 50.0% | |
| TTGAGATGAAAAGGGGGGAC+TGG | + | chr7.2:3841574-3841593 | MS.gene29345:CDS | 50.0% | |
| TTTGCTACACCATGTGGACC+AGG | + | chr7.2:3841736-3841755 | MS.gene29345:intron | 50.0% | |
| ! | GGAGGAGGTTGTTTCACCTT+TGG | - | chr7.2:3841522-3841541 | None:intergenic | 50.0% |
| ! | GGAGGCTTTTTGATCACTGG+AGG | - | chr7.2:3841498-3841517 | None:intergenic | 50.0% |
| ! | GGAGGTTGTTTCACCTTTGG+TGG | - | chr7.2:3841519-3841538 | None:intergenic | 50.0% |
| ! | GGCTTTTTGATCACTGGAGG+AGG | - | chr7.2:3841495-3841514 | None:intergenic | 50.0% |
| ! | GGTGGAGGCTTTTTGATCAC+TGG | - | chr7.2:3841501-3841520 | None:intergenic | 50.0% |
| ! | GGTTCTGACTCTGACGAAGA+TGG | + | chr7.2:3842936-3842955 | MS.gene29345:CDS | 50.0% |
| ! | GGTTGTTTCACCTTTGGTGG+AGG | - | chr7.2:3841516-3841535 | None:intergenic | 50.0% |
| ! | GTTCTAGGTCTAGAAGGACC+GGG | - | chr7.2:3842546-3842565 | None:intergenic | 50.0% |
| ! | GTTTTTATCTGGGAGGGGAG+GGG | - | chr7.2:3842102-3842121 | None:intergenic | 50.0% |
| ! | TGGTAATGACAGAGGGTCTC+AGG | + | chr7.2:3843220-3843239 | MS.gene29345:CDS | 50.0% |
| ! | TTTTTATCTGGGAGGGGAGG+GGG | - | chr7.2:3842101-3842120 | None:intergenic | 50.0% |
| !! | ACACGTCTCTTTGGAGTAGG+AGG | - | chr7.2:3841540-3841559 | None:intergenic | 50.0% |
| !! | CCAACACGTCTCTTTGGAGT+AGG | - | chr7.2:3841543-3841562 | None:intergenic | 50.0% |
| !! | GGTGGTGGTGATTCTGAAAC+AGG | - | chr7.2:3840158-3840177 | None:intergenic | 50.0% |
| !! | GTTGTTGTTGGTGATGGTGG+TGG | - | chr7.2:3840176-3840195 | None:intergenic | 50.0% |
| !! | TTTGAGATGATGGAAGCCGG+AGG | + | chr7.2:3840984-3841003 | MS.gene29345:intron | 50.0% |
| !!! | TGGTTTTGGATGCCCCAATG+TGG | + | chr7.2:3840759-3840778 | MS.gene29345:CDS | 50.0% |
| ACGCCCACCTGATGAATTCC+TGG | + | chr7.2:3842251-3842270 | MS.gene29345:CDS | 55.0% | |
| AGGGTTTAAGAGCCGGCGTT+TGG | - | chr7.2:3839943-3839962 | None:intergenic | 55.0% | |
| ATTCGTCATCGTGGGACCCT+GGG | - | chr7.2:3842509-3842528 | None:intergenic | 55.0% | |
| CAACTGTCTCTTGGGACGCT+TGG | - | chr7.2:3842004-3842023 | None:intergenic | 55.0% | |
| CCCAAGAGACAGTTGCTTCC+AGG | + | chr7.2:3842009-3842028 | MS.gene29345:CDS | 55.0% | |
| CCCCAATGTGGACAGAAAGG+TGG | + | chr7.2:3840771-3840790 | MS.gene29345:CDS | 55.0% | |
| CTCAGGGAAGTAACCGTGGT+CGG | + | chr7.2:3843405-3843424 | MS.gene29345:CDS | 55.0% | |
| CTCGAGGAAATGACCGGAGT+AGG | + | chr7.2:3843486-3843505 | MS.gene29345:CDS | 55.0% | |
| GACCAGAGAAGGAAAGGCAG+AGG | + | chr7.2:3842891-3842910 | MS.gene29345:CDS | 55.0% | |
| GACCTCTGCCTTTCCTTCTC+TGG | - | chr7.2:3842896-3842915 | None:intergenic | 55.0% | |
| GAGGGTCTCGAGGAAATGAC+CGG | + | chr7.2:3843480-3843499 | MS.gene29345:CDS | 55.0% | |
| GGAATTTGTGCATCCGTGGC+CGG | + | chr7.2:3840271-3840290 | MS.gene29345:CDS | 55.0% | |
| GGCAAGAGGTTTCCAATGCC+TGG | + | chr7.2:3842334-3842353 | MS.gene29345:CDS | 55.0% | |
| GGCAATGACAGAGGGTCTCA+GGG | + | chr7.2:3843305-3843324 | MS.gene29345:CDS | 55.0% | |
| GGGAATGATAGAGGGTCTCG+AGG | + | chr7.2:3843470-3843489 | MS.gene29345:CDS | 55.0% | |
| TAAGATGGGCAGTCGGCAAG+AGG | + | chr7.2:3842320-3842339 | MS.gene29345:CDS | 55.0% | |
| TATTCGTCATCGTGGGACCC+TGG | - | chr7.2:3842510-3842529 | None:intergenic | 55.0% | |
| TCCCGTCCAACACGTCTCTT+TGG | - | chr7.2:3841549-3841568 | None:intergenic | 55.0% | |
| TCTGACGAAGATGGCAGTGC+TGG | + | chr7.2:3842945-3842964 | MS.gene29345:CDS | 55.0% | |
| TCTGGTCGGCAGCAGAAACA+TGG | - | chr7.2:3842878-3842897 | None:intergenic | 55.0% | |
| TGGCAATGACAGAGGGTCTC+AGG | + | chr7.2:3843304-3843323 | MS.gene29345:CDS | 55.0% | |
| TTTCTGCTGCCGACCAGAGA+AGG | + | chr7.2:3842880-3842899 | MS.gene29345:CDS | 55.0% | |
| ! | TTTCAGGTCGTTGTCGAGGC+AGG | + | chr7.2:3840720-3840739 | MS.gene29345:intron | 55.0% |
| !! | CGAAGAATAGGAGCGTCCCA+GGG | + | chr7.2:3842490-3842509 | MS.gene29345:CDS | 55.0% |
| !! | CGTCTCTTTGGAGTAGGAGG+AGG | - | chr7.2:3841537-3841556 | None:intergenic | 55.0% |
| !! | GTTGTTGGTGATGGTGGTGG+TGG | - | chr7.2:3840173-3840192 | None:intergenic | 55.0% |
| ACAATGCTCGGCATGTGGGG+TGG | + | chr7.2:3842454-3842473 | MS.gene29345:CDS | 60.0% | |
| AGGTCTAGAAGGACCGGGAC+CGG | - | chr7.2:3842541-3842560 | None:intergenic | 60.0% | |
| CAATGCTCGGCATGTGGGGT+GGG | + | chr7.2:3842455-3842474 | MS.gene29345:CDS | 60.0% | |
| GCTGCCGACCAGAGAAGGAA+AGG | + | chr7.2:3842885-3842904 | MS.gene29345:CDS | 60.0% | |
| GGGTCTCAGGGAAGTAACCG+TGG | + | chr7.2:3843152-3843171 | MS.gene29345:CDS | 60.0% | |
| TTGTGCATCCGTGGCCGGAA+TGG | + | chr7.2:3840276-3840295 | MS.gene29345:CDS | 60.0% | |
| !! | GCGAAGAATAGGAGCGTCCC+AGG | + | chr7.2:3842489-3842508 | MS.gene29345:CDS | 60.0% |
| ! | GATGACAGGGAGCACGGCAG+AGG | + | chr7.2:3843518-3843537 | MS.gene29345:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 3839909 | 3843616 | 3839909 | ID=MS.gene29345 |
| chr7.2 | mRNA | 3839909 | 3843616 | 3839909 | ID=MS.gene29345.t1;Parent=MS.gene29345 |
| chr7.2 | exon | 3839909 | 3840492 | 3839909 | ID=MS.gene29345.t1.exon1;Parent=MS.gene29345.t1 |
| chr7.2 | CDS | 3839909 | 3840492 | 3839909 | ID=cds.MS.gene29345.t1;Parent=MS.gene29345.t1 |
| chr7.2 | exon | 3840726 | 3840843 | 3840726 | ID=MS.gene29345.t1.exon2;Parent=MS.gene29345.t1 |
| chr7.2 | CDS | 3840726 | 3840843 | 3840726 | ID=cds.MS.gene29345.t1;Parent=MS.gene29345.t1 |
| chr7.2 | exon | 3841252 | 3841607 | 3841252 | ID=MS.gene29345.t1.exon3;Parent=MS.gene29345.t1 |
| chr7.2 | CDS | 3841252 | 3841607 | 3841252 | ID=cds.MS.gene29345.t1;Parent=MS.gene29345.t1 |
| chr7.2 | exon | 3841951 | 3842049 | 3841951 | ID=MS.gene29345.t1.exon4;Parent=MS.gene29345.t1 |
| chr7.2 | CDS | 3841951 | 3842049 | 3841951 | ID=cds.MS.gene29345.t1;Parent=MS.gene29345.t1 |
| chr7.2 | exon | 3842197 | 3843616 | 3842197 | ID=MS.gene29345.t1.exon5;Parent=MS.gene29345.t1 |
| chr7.2 | CDS | 3842197 | 3843616 | 3842197 | ID=cds.MS.gene29345.t1;Parent=MS.gene29345.t1 |
| Gene Sequence |
| Protein sequence |
