Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053080.t1 | XP_013450735.1 | 87.3 | 636 | 73 | 3 | 1 | 633 | 1 | 631 | 8.90E-293 | 1015.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053080.t1 | Q67XL4 | 32.3 | 403 | 220 | 10 | 7 | 394 | 56 | 420 | 3.7e-37 | 157.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053080.t1 | A0A072U6I9 | 87.3 | 636 | 73 | 3 | 1 | 633 | 1 | 631 | 6.4e-293 | 1015.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene053080 | 0.812083 | 5.07E-51 | -1.69E-46 |
| MS.gene049207 | MS.gene053080 | 0.800557 | 1.36E-48 | -1.69E-46 |
| MS.gene050303 | MS.gene053080 | 0.813293 | 2.75E-51 | -1.69E-46 |
| MS.gene050605 | MS.gene053080 | 0.803297 | 3.73E-49 | -1.69E-46 |
| MS.gene051363 | MS.gene053080 | 0.803304 | 3.72E-49 | -1.69E-46 |
| MS.gene052012 | MS.gene053080 | 0.809046 | 2.30E-50 | -1.69E-46 |
| MS.gene052954 | MS.gene053080 | 0.802583 | 5.24E-49 | -1.69E-46 |
| MS.gene053008 | MS.gene053080 | 0.814911 | 1.21E-51 | -1.69E-46 |
| MS.gene053080 | MS.gene053226 | 0.832909 | 7.22E-56 | -1.69E-46 |
| MS.gene053080 | MS.gene054657 | 0.827845 | 1.25E-54 | -1.69E-46 |
| MS.gene053080 | MS.gene054994 | 0.805012 | 1.64E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene055512 | 0.800624 | 1.32E-48 | -1.69E-46 |
| MS.gene053080 | MS.gene056403 | 0.804171 | 2.45E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene057060 | 0.815025 | 1.14E-51 | -1.69E-46 |
| MS.gene053080 | MS.gene057140 | 0.813595 | 2.36E-51 | -1.69E-46 |
| MS.gene053080 | MS.gene057555 | 0.813268 | 2.79E-51 | -1.69E-46 |
| MS.gene053080 | MS.gene058126 | 0.819696 | 1.01E-52 | -1.69E-46 |
| MS.gene053080 | MS.gene058548 | 0.827364 | 1.63E-54 | -1.69E-46 |
| MS.gene053080 | MS.gene058549 | 0.808551 | 2.93E-50 | -1.69E-46 |
| MS.gene053080 | MS.gene058595 | 0.808093 | 3.67E-50 | -1.69E-46 |
| MS.gene053080 | MS.gene05954 | 0.819457 | 1.15E-52 | -1.69E-46 |
| MS.gene053080 | MS.gene059569 | 0.809136 | 2.20E-50 | -1.69E-46 |
| MS.gene053080 | MS.gene05978 | 0.825589 | 4.32E-54 | -1.69E-46 |
| MS.gene053080 | MS.gene05979 | 0.815583 | 8.58E-52 | -1.69E-46 |
| MS.gene053080 | MS.gene059830 | 0.812606 | 3.90E-51 | -1.69E-46 |
| MS.gene053080 | MS.gene060586 | 0.804675 | 1.93E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene061720 | 0.809173 | 2.16E-50 | -1.69E-46 |
| MS.gene053080 | MS.gene062672 | 0.802721 | 4.91E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene062743 | 0.801081 | 1.07E-48 | -1.69E-46 |
| MS.gene053080 | MS.gene063407 | 0.834331 | 3.19E-56 | -1.69E-46 |
| MS.gene053080 | MS.gene064937 | 0.80002 | 1.75E-48 | -1.69E-46 |
| MS.gene053080 | MS.gene065559 | 0.834316 | 3.22E-56 | -1.69E-46 |
| MS.gene053080 | MS.gene065793 | 0.865486 | 5.70E-65 | -1.69E-46 |
| MS.gene053080 | MS.gene066194 | 0.84588 | 3.08E-59 | -1.69E-46 |
| MS.gene053080 | MS.gene066320 | 0.801377 | 9.27E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene06667 | 0.805241 | 1.47E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene067697 | 0.809048 | 2.29E-50 | -1.69E-46 |
| MS.gene053080 | MS.gene068135 | 0.814813 | 1.27E-51 | -1.69E-46 |
| MS.gene053080 | MS.gene068549 | 0.810873 | 9.28E-51 | -1.69E-46 |
| MS.gene053080 | MS.gene069206 | 0.832139 | 1.12E-55 | -1.69E-46 |
| MS.gene053080 | MS.gene06982 | 0.802564 | 5.29E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene07100 | 0.800603 | 1.33E-48 | -1.69E-46 |
| MS.gene053080 | MS.gene07147 | 0.826159 | 3.16E-54 | -1.69E-46 |
| MS.gene053080 | MS.gene071570 | 0.818785 | 1.64E-52 | -1.69E-46 |
| MS.gene053080 | MS.gene07205 | 0.819843 | 9.39E-53 | -1.69E-46 |
| MS.gene053080 | MS.gene072280 | 0.809873 | 1.53E-50 | -1.69E-46 |
| MS.gene053080 | MS.gene072478 | 0.807887 | 4.06E-50 | -1.69E-46 |
| MS.gene053080 | MS.gene072716 | 0.800154 | 1.65E-48 | -1.69E-46 |
| MS.gene053080 | MS.gene072782 | 0.815404 | 9.41E-52 | -1.69E-46 |
| MS.gene053080 | MS.gene073064 | 0.811091 | 8.33E-51 | -1.69E-46 |
| MS.gene053080 | MS.gene07314 | 0.80618 | 9.32E-50 | -1.69E-46 |
| MS.gene053080 | MS.gene073332 | 0.812448 | 4.22E-51 | -1.69E-46 |
| MS.gene053080 | MS.gene073637 | 0.820606 | 6.28E-53 | -1.69E-46 |
| MS.gene053080 | MS.gene073833 | 0.814831 | 1.26E-51 | -1.69E-46 |
| MS.gene053080 | MS.gene073954 | 0.802175 | 6.36E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene08853 | 0.808664 | 2.77E-50 | -1.69E-46 |
| MS.gene053080 | MS.gene08862 | 0.808332 | 3.26E-50 | -1.69E-46 |
| MS.gene053080 | MS.gene09952 | 0.815953 | 7.10E-52 | -1.69E-46 |
| MS.gene053080 | MS.gene21149 | 0.817004 | 4.13E-52 | -1.69E-46 |
| MS.gene053080 | MS.gene21700 | 0.834154 | 3.53E-56 | -1.69E-46 |
| MS.gene053080 | MS.gene21886 | 0.833256 | 5.92E-56 | -1.69E-46 |
| MS.gene053080 | MS.gene21926 | 0.838057 | 3.61E-57 | -1.69E-46 |
| MS.gene053080 | MS.gene21927 | 0.830519 | 2.81E-55 | -1.69E-46 |
| MS.gene053080 | MS.gene21928 | 0.834977 | 2.19E-56 | -1.69E-46 |
| MS.gene053080 | MS.gene21929 | 0.824377 | 8.34E-54 | -1.69E-46 |
| MS.gene053080 | MS.gene22270 | 0.840318 | 9.35E-58 | -1.69E-46 |
| MS.gene053080 | MS.gene22271 | 0.809429 | 1.90E-50 | -1.69E-46 |
| MS.gene053080 | MS.gene22964 | 0.806006 | 1.01E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene22974 | 0.803976 | 2.70E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene23304 | 0.801078 | 1.07E-48 | -1.69E-46 |
| MS.gene053080 | MS.gene23546 | 0.809261 | 2.07E-50 | -1.69E-46 |
| MS.gene053080 | MS.gene24012 | 0.803248 | 3.82E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene24608 | 0.835136 | 2.00E-56 | -1.69E-46 |
| MS.gene053080 | MS.gene24692 | 0.819004 | 1.46E-52 | -1.69E-46 |
| MS.gene053080 | MS.gene25207 | 0.85548 | 6.13E-62 | -1.69E-46 |
| MS.gene053080 | MS.gene25218 | 0.807787 | 4.26E-50 | -1.69E-46 |
| MS.gene053080 | MS.gene27921 | 0.817863 | 2.64E-52 | -1.69E-46 |
| MS.gene053080 | MS.gene28218 | 0.82184 | 3.26E-53 | -1.69E-46 |
| MS.gene053080 | MS.gene28652 | 0.813067 | 3.09E-51 | -1.69E-46 |
| MS.gene053080 | MS.gene28709 | 0.812198 | 4.78E-51 | -1.69E-46 |
| MS.gene053080 | MS.gene28751 | 0.805905 | 1.07E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene28864 | 0.830986 | 2.16E-55 | -1.69E-46 |
| MS.gene053080 | MS.gene28944 | 0.829552 | 4.83E-55 | -1.69E-46 |
| MS.gene053080 | MS.gene29345 | 0.811972 | 5.36E-51 | -1.69E-46 |
| MS.gene053080 | MS.gene30246 | 0.810694 | 1.01E-50 | -1.69E-46 |
| MS.gene053080 | MS.gene30855 | 0.817242 | 3.65E-52 | -1.69E-46 |
| MS.gene053080 | MS.gene32091 | 0.818198 | 2.22E-52 | -1.69E-46 |
| MS.gene053080 | MS.gene32419 | 0.83443 | 3.01E-56 | -1.69E-46 |
| MS.gene053080 | MS.gene32556 | 0.804006 | 2.66E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene33879 | 0.805795 | 1.12E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene34495 | 0.83713 | 6.23E-57 | -1.69E-46 |
| MS.gene053080 | MS.gene35121 | 0.802232 | 6.18E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene35438 | 0.80601 | 1.01E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene36046 | 0.805696 | 1.18E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene36453 | 0.811469 | 6.89E-51 | -1.69E-46 |
| MS.gene053080 | MS.gene36472 | 0.818114 | 2.32E-52 | -1.69E-46 |
| MS.gene053080 | MS.gene38754 | 0.849195 | 3.78E-60 | -1.69E-46 |
| MS.gene053080 | MS.gene41434 | 0.834493 | 2.90E-56 | -1.69E-46 |
| MS.gene053080 | MS.gene41455 | 0.802406 | 5.69E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene41606 | 0.835839 | 1.33E-56 | -1.69E-46 |
| MS.gene053080 | MS.gene42580 | 0.804298 | 2.31E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene43491 | 0.802313 | 5.95E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene44540 | 0.809224 | 2.10E-50 | -1.69E-46 |
| MS.gene053080 | MS.gene44753 | 0.836361 | 9.79E-57 | -1.69E-46 |
| MS.gene053080 | MS.gene45567 | 0.835712 | 1.43E-56 | -1.69E-46 |
| MS.gene053080 | MS.gene45933 | 0.817917 | 2.57E-52 | -1.69E-46 |
| MS.gene053080 | MS.gene47176 | 0.804673 | 1.93E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene47878 | 0.829528 | 4.89E-55 | -1.69E-46 |
| MS.gene053080 | MS.gene48988 | 0.812843 | 3.46E-51 | -1.69E-46 |
| MS.gene053080 | MS.gene49310 | 0.808214 | 3.46E-50 | -1.69E-46 |
| MS.gene053080 | MS.gene50615 | 0.829418 | 5.21E-55 | -1.69E-46 |
| MS.gene053080 | MS.gene52940 | 0.802498 | 5.45E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene53579 | 0.81182 | 5.78E-51 | -1.69E-46 |
| MS.gene053080 | MS.gene55396 | 0.829153 | 6.03E-55 | -1.69E-46 |
| MS.gene053080 | MS.gene56067 | 0.827627 | 1.41E-54 | -1.69E-46 |
| MS.gene053080 | MS.gene56227 | 0.808912 | 2.45E-50 | -1.69E-46 |
| MS.gene053080 | MS.gene56414 | 0.818782 | 1.64E-52 | -1.69E-46 |
| MS.gene053080 | MS.gene56468 | 0.843416 | 1.42E-58 | -1.69E-46 |
| MS.gene053080 | MS.gene56868 | 0.822686 | 2.07E-53 | -1.69E-46 |
| MS.gene053080 | MS.gene57075 | 0.801479 | 8.83E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene58503 | 0.812034 | 5.19E-51 | -1.69E-46 |
| MS.gene053080 | MS.gene59369 | 0.817748 | 2.81E-52 | -1.69E-46 |
| MS.gene053080 | MS.gene59949 | 0.800493 | 1.40E-48 | -1.69E-46 |
| MS.gene053080 | MS.gene61642 | 0.813081 | 3.07E-51 | -1.69E-46 |
| MS.gene053080 | MS.gene61980 | 0.824043 | 9.99E-54 | -1.69E-46 |
| MS.gene053080 | MS.gene61999 | 0.840206 | 9.99E-58 | -1.69E-46 |
| MS.gene053080 | MS.gene62096 | 0.803207 | 3.89E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene63893 | 0.823584 | 1.28E-53 | -1.69E-46 |
| MS.gene053080 | MS.gene64981 | 0.802778 | 4.77E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene65895 | 0.812037 | 5.19E-51 | -1.69E-46 |
| MS.gene053080 | MS.gene65896 | 0.813521 | 2.45E-51 | -1.69E-46 |
| MS.gene053080 | MS.gene66973 | 0.81458 | 1.43E-51 | -1.69E-46 |
| MS.gene053080 | MS.gene67346 | 0.814221 | 1.72E-51 | -1.69E-46 |
| MS.gene053080 | MS.gene69214 | 0.836574 | 8.64E-57 | -1.69E-46 |
| MS.gene053080 | MS.gene69477 | 0.801612 | 8.30E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene71299 | 0.812309 | 4.52E-51 | -1.69E-46 |
| MS.gene053080 | MS.gene71825 | 0.82709 | 1.90E-54 | -1.69E-46 |
| MS.gene053080 | MS.gene71826 | 0.831316 | 1.79E-55 | -1.69E-46 |
| MS.gene053080 | MS.gene71949 | 0.81081 | 9.58E-51 | -1.69E-46 |
| MS.gene053080 | MS.gene72128 | 0.80863 | 2.82E-50 | -1.69E-46 |
| MS.gene053080 | MS.gene72130 | 0.816572 | 5.16E-52 | -1.69E-46 |
| MS.gene053080 | MS.gene73877 | 0.802182 | 6.33E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene73879 | 0.800276 | 1.55E-48 | -1.69E-46 |
| MS.gene053080 | MS.gene74444 | 0.826579 | 2.51E-54 | -1.69E-46 |
| MS.gene053080 | MS.gene74503 | 0.82487 | 6.39E-54 | -1.69E-46 |
| MS.gene053080 | MS.gene75003 | 0.826546 | 2.56E-54 | -1.69E-46 |
| MS.gene053080 | MS.gene75187 | 0.834488 | 2.91E-56 | -1.69E-46 |
| MS.gene053080 | MS.gene76002 | 0.843252 | 1.57E-58 | -1.69E-46 |
| MS.gene053080 | MS.gene78478 | 0.842674 | 2.24E-58 | -1.69E-46 |
| MS.gene053080 | MS.gene78591 | 0.809841 | 1.55E-50 | -1.69E-46 |
| MS.gene053080 | MS.gene78682 | 0.836256 | 1.04E-56 | -1.69E-46 |
| MS.gene053080 | MS.gene79253 | 0.815545 | 8.75E-52 | -1.69E-46 |
| MS.gene053080 | MS.gene80908 | 0.804668 | 1.93E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene81406 | 0.804901 | 1.73E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene81498 | 0.82992 | 3.93E-55 | -1.69E-46 |
| MS.gene053080 | MS.gene81900 | 0.805796 | 1.12E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene81998 | 0.802512 | 5.42E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene82387 | 0.818329 | 2.08E-52 | -1.69E-46 |
| MS.gene053080 | MS.gene82805 | 0.926087 | 7.59E-91 | -1.69E-46 |
| MS.gene053080 | MS.gene82879 | 0.82142 | 4.08E-53 | -1.69E-46 |
| MS.gene053080 | MS.gene83091 | 0.844836 | 5.91E-59 | -1.69E-46 |
| MS.gene053080 | MS.gene83200 | 0.808906 | 2.46E-50 | -1.69E-46 |
| MS.gene053080 | MS.gene83734 | 0.856112 | 4.01E-62 | -1.69E-46 |
| MS.gene053080 | MS.gene83830 | 0.824852 | 6.45E-54 | -1.69E-46 |
| MS.gene053080 | MS.gene84040 | 0.823645 | 1.24E-53 | -1.69E-46 |
| MS.gene053080 | MS.gene84300 | 0.804592 | 2.01E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene84455 | 0.804103 | 2.54E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene85663 | 0.836932 | 7.00E-57 | -1.69E-46 |
| MS.gene053080 | MS.gene86380 | 0.816442 | 5.52E-52 | -1.69E-46 |
| MS.gene053080 | MS.gene89511 | 0.831793 | 1.36E-55 | -1.69E-46 |
| MS.gene053080 | MS.gene90863 | 0.813725 | 2.21E-51 | -1.69E-46 |
| MS.gene053080 | MS.gene91907 | 0.800777 | 1.23E-48 | -1.69E-46 |
| MS.gene053080 | MS.gene92849 | 0.82677 | 2.26E-54 | -1.69E-46 |
| MS.gene053080 | MS.gene93202 | 0.815766 | 7.81E-52 | -1.69E-46 |
| MS.gene053080 | MS.gene93501 | 0.808335 | 3.26E-50 | -1.69E-46 |
| MS.gene053080 | MS.gene93764 | 0.803676 | 3.11E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene94542 | 0.80545 | 1.33E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene95039 | 0.805814 | 1.11E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene95255 | 0.806049 | 9.94E-50 | -1.69E-46 |
| MS.gene053080 | MS.gene95472 | 0.817035 | 4.06E-52 | -1.69E-46 |
| MS.gene053080 | MS.gene95486 | 0.80944 | 1.89E-50 | -1.69E-46 |
| MS.gene053080 | MS.gene95625 | 0.806249 | 9.02E-50 | -1.69E-46 |
| MS.gene053080 | MS.gene95886 | 0.808954 | 2.40E-50 | -1.69E-46 |
| MS.gene053080 | MS.gene96322 | 0.837385 | 5.36E-57 | -1.69E-46 |
| MS.gene053080 | MS.gene96508 | 0.810678 | 1.02E-50 | -1.69E-46 |
| MS.gene053080 | MS.gene97738 | 0.826613 | 2.46E-54 | -1.69E-46 |
| MS.gene053080 | MS.gene97766 | 0.800684 | 1.28E-48 | -1.69E-46 |
| MS.gene053080 | MS.gene98277 | 0.803794 | 2.94E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene98461 | 0.801917 | 7.18E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene98533 | 0.805522 | 1.28E-49 | -1.69E-46 |
| MS.gene053080 | MS.gene98828 | 0.813302 | 2.74E-51 | -1.69E-46 |
| MS.gene053080 | MS.gene98953 | 0.828063 | 1.11E-54 | -1.69E-46 |
| MS.gene053080 | MS.gene99313 | 0.807867 | 4.10E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053080.t1 | MTR_6g004480 | 93.082 | 636 | 36 | 3 | 1 | 633 | 1 | 631 | 0.0 | 1120 |
| MS.gene053080.t1 | MTR_1g050760 | 50.000 | 174 | 85 | 1 | 110 | 281 | 1 | 174 | 4.58e-49 | 174 |
| MS.gene053080.t1 | MTR_1g050760 | 50.000 | 174 | 85 | 1 | 110 | 281 | 116 | 289 | 3.70e-47 | 172 |
| MS.gene053080.t1 | MTR_4g120880 | 48.521 | 169 | 87 | 0 | 113 | 281 | 161 | 329 | 2.59e-41 | 153 |
| MS.gene053080.t1 | MTR_4g067300 | 44.970 | 169 | 93 | 0 | 113 | 281 | 134 | 302 | 5.98e-40 | 152 |
| MS.gene053080.t1 | MTR_4g120880 | 48.299 | 147 | 76 | 0 | 113 | 259 | 161 | 307 | 1.05e-34 | 134 |
| MS.gene053080.t1 | MTR_6g084410 | 32.701 | 211 | 128 | 5 | 77 | 284 | 557 | 756 | 5.80e-23 | 104 |
| MS.gene053080.t1 | MTR_1g475240 | 31.925 | 213 | 127 | 6 | 77 | 284 | 566 | 765 | 7.06e-23 | 104 |
| MS.gene053080.t1 | MTR_1g075190 | 31.925 | 213 | 127 | 6 | 77 | 284 | 566 | 765 | 7.06e-23 | 104 |
| MS.gene053080.t1 | MTR_6g008410 | 35.593 | 177 | 106 | 3 | 114 | 284 | 518 | 692 | 1.64e-21 | 100 |
| MS.gene053080.t1 | MTR_2g100660 | 37.500 | 128 | 72 | 2 | 148 | 272 | 593 | 715 | 1.86e-17 | 87.0 |
| MS.gene053080.t1 | MTR_4g126140 | 28.293 | 205 | 140 | 3 | 89 | 290 | 531 | 731 | 4.02e-17 | 85.9 |
| MS.gene053080.t1 | MTR_8g104340 | 30.851 | 188 | 120 | 4 | 74 | 258 | 412 | 592 | 1.54e-15 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053080.t1 | AT3G27550 | 72.010 | 393 | 95 | 7 | 1 | 385 | 1 | 386 | 1.04e-163 | 480 |
| MS.gene053080.t1 | AT3G27550 | 80.303 | 330 | 60 | 2 | 61 | 385 | 1 | 330 | 6.70e-163 | 476 |
| MS.gene053080.t1 | AT3G27550 | 80.303 | 330 | 60 | 2 | 61 | 385 | 1 | 330 | 6.70e-163 | 476 |
| MS.gene053080.t1 | AT3G25440 | 45.918 | 196 | 104 | 1 | 96 | 289 | 57 | 252 | 2.53e-47 | 171 |
| MS.gene053080.t1 | AT3G25440 | 45.918 | 196 | 104 | 1 | 96 | 289 | 121 | 316 | 1.53e-46 | 171 |
| MS.gene053080.t1 | AT2G28480 | 46.857 | 175 | 93 | 0 | 107 | 281 | 119 | 293 | 6.87e-44 | 161 |
| MS.gene053080.t1 | AT3G25440 | 47.826 | 161 | 82 | 1 | 131 | 289 | 1 | 161 | 3.98e-42 | 154 |
| MS.gene053080.t1 | AT3G25440 | 47.826 | 161 | 82 | 1 | 131 | 289 | 1 | 161 | 3.98e-42 | 154 |
| MS.gene053080.t1 | AT3G25440 | 47.826 | 161 | 82 | 1 | 131 | 289 | 1 | 161 | 3.98e-42 | 154 |
| MS.gene053080.t1 | AT4G13070 | 45.128 | 195 | 97 | 3 | 78 | 268 | 111 | 299 | 1.69e-40 | 151 |
| MS.gene053080.t1 | AT3G18390 | 35.106 | 188 | 109 | 4 | 100 | 284 | 611 | 788 | 1.66e-25 | 112 |
| MS.gene053080.t1 | AT3G23070 | 36.000 | 175 | 99 | 3 | 90 | 261 | 586 | 750 | 7.15e-23 | 104 |
| MS.gene053080.t1 | AT4G14510 | 32.812 | 192 | 116 | 3 | 90 | 278 | 613 | 794 | 2.47e-22 | 102 |
| MS.gene053080.t1 | AT3G01370 | 37.143 | 140 | 85 | 1 | 148 | 284 | 575 | 714 | 3.38e-22 | 102 |
| MS.gene053080.t1 | AT4G29750 | 32.609 | 184 | 112 | 3 | 113 | 290 | 611 | 788 | 4.48e-21 | 98.6 |
| MS.gene053080.t1 | AT4G29750 | 32.609 | 184 | 112 | 3 | 113 | 290 | 611 | 788 | 6.88e-21 | 97.8 |
| MS.gene053080.t1 | AT5G16180 | 31.795 | 195 | 118 | 5 | 111 | 290 | 523 | 717 | 1.43e-16 | 84.0 |
Find 159 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTGGTGATCTCTTCTTA+TGG | 0.210452 | 6.2:-543149 | None:intergenic |
| GTTGGTGTTCGTGGAGTATT+TGG | 0.242614 | 6.2:+541299 | MS.gene053080:CDS |
| AAGAGTCTGGTAAAACATTA+AGG | 0.251609 | 6.2:+539088 | MS.gene053080:CDS |
| TTCAGCTTCATATTCTTTAT+CGG | 0.273368 | 6.2:-542359 | None:intergenic |
| TGCAATGTGGGAGTCGGATT+TGG | 0.290486 | 6.2:+542837 | MS.gene053080:CDS |
| CATTTCTTTAATTCTTTCCT+TGG | 0.291251 | 6.2:-541393 | None:intergenic |
| TCCCTGCCTCTCAAACTCTT+TGG | 0.295275 | 6.2:-542976 | None:intergenic |
| CTCTTTGTAAGGGTATTAAT+AGG | 0.314891 | 6.2:-541524 | None:intergenic |
| CAAGCTTCATCAGCTTCCTT+TGG | 0.315883 | 6.2:-543165 | None:intergenic |
| AGTTTGGAAGACTTAGATAT+TGG | 0.318025 | 6.2:+542401 | MS.gene053080:CDS |
| ATTGGCAATGGTCAAGTTAA+TGG | 0.324195 | 6.2:+542724 | MS.gene053080:CDS |
| AGCTAAATTTAGGACGAATA+TGG | 0.330496 | 6.2:+542768 | MS.gene053080:CDS |
| AGTCCTCCTCACCTTCTGAT+TGG | 0.334499 | 6.2:-543065 | None:intergenic |
| TTCAGAAATGTTGTGCCTTT+AGG | 0.335105 | 6.2:+538898 | MS.gene053080:intron |
| ATTTCTTTAATTCTTTCCTT+GGG | 0.340101 | 6.2:-541392 | None:intergenic |
| TTCAAGAGCTTGCTCAAATC+TGG | 0.345605 | 6.2:-542080 | None:intergenic |
| ATCTTACCTTCCTCTTTGTA+AGG | 0.348042 | 6.2:-541535 | None:intergenic |
| CTTTACACCCGAACAGCTTC+AGG | 0.349585 | 6.2:+541235 | MS.gene053080:CDS |
| CCTTTAGCGGTTTGGAAGAC+TGG | 0.351247 | 6.2:+543037 | MS.gene053080:CDS |
| CTCAAATCTGGCCTTGAATA+GGG | 0.356118 | 6.2:-542068 | None:intergenic |
| TGCTCTATTCCTTGTCCTAA+AGG | 0.362024 | 6.2:-538913 | None:intergenic |
| TTTATACGCCTGAAGCTGTT+CGG | 0.362329 | 6.2:-541243 | None:intergenic |
| GCTCAAATCTGGCCTTGAAT+AGG | 0.363277 | 6.2:-542069 | None:intergenic |
| CATGGATGCCTTTAGCGGTT+TGG | 0.367845 | 6.2:+543029 | MS.gene053080:CDS |
| AAGTTGAAAGAGAGATGAAA+TGG | 0.367950 | 6.2:-538621 | None:intergenic |
| TTATACGCCTGAAGCTGTTC+GGG | 0.370216 | 6.2:-541242 | None:intergenic |
| AACTTCAATCCAATCTCTTC+AGG | 0.372514 | 6.2:+538639 | MS.gene053080:CDS |
| AGAAAGTGGAAGCCACTCTT+TGG | 0.372764 | 6.2:-542189 | None:intergenic |
| GATTCCTCCAAACCATCATT+AGG | 0.373992 | 6.2:-542280 | None:intergenic |
| GTCCTCCTCACCTTCTGATT+GGG | 0.380053 | 6.2:-543064 | None:intergenic |
| GCCATTGCAGTTGGATCCTC+AGG | 0.380404 | 6.2:-542160 | None:intergenic |
| ACTTCCATCTTTCTTGTCAA+TGG | 0.383828 | 6.2:-542218 | None:intergenic |
| GCCAAAGAAAAGGAAGAGTT+TGG | 0.388346 | 6.2:+542385 | MS.gene053080:CDS |
| GGAATCAGATCCTGCTGAAC+AGG | 0.388918 | 6.2:+542297 | MS.gene053080:CDS |
| AAGGGTTTACCTGAAGAGAT+TGG | 0.402994 | 6.2:-538648 | None:intergenic |
| GACACGGTGAAGCTAAATTT+AGG | 0.418116 | 6.2:+542758 | MS.gene053080:CDS |
| AATAGAACCTAATGATGGTT+TGG | 0.420274 | 6.2:+542273 | MS.gene053080:CDS |
| AATACTCCACGAACACCAAC+TGG | 0.421248 | 6.2:-541296 | None:intergenic |
| TATGTTCCAGTTGGTGTTCG+TGG | 0.423683 | 6.2:+541290 | MS.gene053080:CDS |
| GAGAGATGAAATGGGTTTGA+GGG | 0.425769 | 6.2:-538612 | None:intergenic |
| AGAGAGATGAAATGGGTTTG+AGG | 0.426459 | 6.2:-538613 | None:intergenic |
| CACCAAAGAGTTTGAGAGGC+AGG | 0.427775 | 6.2:+542974 | MS.gene053080:CDS |
| AGTTTGAGAGGCAGGGAAGC+AGG | 0.434357 | 6.2:+542982 | MS.gene053080:CDS |
| TTTAAATGGATCCTTGTGTC+GGG | 0.437658 | 6.2:+539008 | MS.gene053080:CDS |
| GCTAAATTTAGGACGAATAT+GGG | 0.439861 | 6.2:+542769 | MS.gene053080:CDS |
| AACAATAAAAGCTATCGTTA+TGG | 0.440253 | 6.2:-538966 | None:intergenic |
| TGCCGTGGTGGAGGCAGCTC+CGG | 0.440666 | 6.2:-541200 | None:intergenic |
| AGAAGAATGCAGAAAGAGTC+TGG | 0.444428 | 6.2:+539075 | MS.gene053080:CDS |
| CAAGGAAAGAATTAAAGAAA+TGG | 0.444685 | 6.2:+541394 | MS.gene053080:CDS |
| AGGATAAATAATACAAGTAT+TGG | 0.447491 | 6.2:+542706 | MS.gene053080:CDS |
| GAGGTAGGTTCAAGGAAAGT+AGG | 0.447947 | 6.2:+542671 | MS.gene053080:CDS |
| CTATCGGCAGTCCGATGCTT+GGG | 0.449257 | 6.2:-542526 | None:intergenic |
| CAAAGGAAGCTGATGAAGCT+TGG | 0.453830 | 6.2:+543166 | MS.gene053080:CDS |
| AGGTTAGAGGCTCAAGAGTT+CGG | 0.454485 | 6.2:+542491 | MS.gene053080:CDS |
| TATTGGAACAGAGAAGAGTA+TGG | 0.456496 | 6.2:+542418 | MS.gene053080:CDS |
| GACTATGATGGTGAGGTTAG+AGG | 0.468968 | 6.2:+542478 | MS.gene053080:CDS |
| AGTTGAAAGAGAGATGAAAT+GGG | 0.472804 | 6.2:-538620 | None:intergenic |
| TCTGGATCATGCCGTGGTGG+AGG | 0.477830 | 6.2:-541209 | None:intergenic |
| AAAGGAAGCTGATGAAGCTT+GGG | 0.481393 | 6.2:+543167 | MS.gene053080:CDS |
| TTATATACAGGCCCTATTCA+AGG | 0.481490 | 6.2:+542057 | MS.gene053080:intron |
| GGTGTTCGTGGAGTATTTGG+AGG | 0.482666 | 6.2:+541302 | MS.gene053080:CDS |
| TGGATGCTGGCCATTGCAGT+TGG | 0.483571 | 6.2:-542169 | None:intergenic |
| CCAGTCTTCCAAACCGCTAA+AGG | 0.489203 | 6.2:-543037 | None:intergenic |
| AAACATAAAGAAAATAGAAC+AGG | 0.489664 | 6.2:+542114 | MS.gene053080:CDS |
| AGAGTCTGGTAAAACATTAA+GGG | 0.491117 | 6.2:+539089 | MS.gene053080:CDS |
| GGAAGCCACTCTTTGGATGC+TGG | 0.495190 | 6.2:-542182 | None:intergenic |
| AGGTAGGTTCAAGGAAAGTA+GGG | 0.497194 | 6.2:+542672 | MS.gene053080:CDS |
| AGCTGAAGAGGCCAAAGAAA+AGG | 0.499259 | 6.2:+542375 | MS.gene053080:CDS |
| ATTCTCTTCATCGTCGCTAT+CGG | 0.500009 | 6.2:-542542 | None:intergenic |
| CCCTACAAGTCAAAATAGTA+AGG | 0.500263 | 6.2:+543110 | MS.gene053080:CDS |
| GGACTCAAGAGGTGGTGATA+AGG | 0.500654 | 6.2:+543083 | MS.gene053080:CDS |
| AATGCCATTGACAAGAAAGA+TGG | 0.502487 | 6.2:+542214 | MS.gene053080:CDS |
| GCTATCGGCAGTCCGATGCT+TGG | 0.508858 | 6.2:-542527 | None:intergenic |
| AGAACAGGACCTGCGGCGGA+TGG | 0.509673 | 6.2:+542129 | MS.gene053080:CDS |
| TGTTCGGGTGTAAAGAGCTC+TGG | 0.511414 | 6.2:-541227 | None:intergenic |
| GAGCAGCAGCAGCGATGATG+AGG | 0.514342 | 6.2:+542909 | MS.gene053080:CDS |
| GATCCATTTAAAAGATTCAA+CGG | 0.514895 | 6.2:-538997 | None:intergenic |
| TCTAGCTCTTCCTGTTCAGC+AGG | 0.518776 | 6.2:-542307 | None:intergenic |
| TTGTCTCCACGGTTAACATA+AGG | 0.519546 | 6.2:-542241 | None:intergenic |
| GACGATGGTGAGTGGCATCA+TGG | 0.520485 | 6.2:+542592 | MS.gene053080:CDS |
| GTGTCCATGGATGCCTTTAG+CGG | 0.520678 | 6.2:+543024 | MS.gene053080:CDS |
| AATGTGGGAGTCGGATTTGG+AGG | 0.524703 | 6.2:+542840 | MS.gene053080:CDS |
| CTGAACAGGAAGAGCTAGAT+CGG | 0.526672 | 6.2:+542311 | MS.gene053080:CDS |
| TGCAAAATATGCATCTCCAT+TGG | 0.528015 | 6.2:+541330 | MS.gene053080:CDS |
| GCTTAAGAAATATGAGCTAC+CGG | 0.528659 | 6.2:+541181 | MS.gene053080:CDS |
| TGAAGCTAGAGGTAGGTTCA+AGG | 0.529177 | 6.2:+542663 | MS.gene053080:CDS |
| GTCAATGGCATTGAAGAAAG+TGG | 0.531512 | 6.2:-542203 | None:intergenic |
| CCGCACTAAATCCGTGTCCA+TGG | 0.531564 | 6.2:+543011 | MS.gene053080:CDS |
| AACAAGAATTATGTTCCAGT+TGG | 0.532863 | 6.2:+541281 | MS.gene053080:CDS |
| TCTTACCTTCCTCTTTGTAA+GGG | 0.535231 | 6.2:-541534 | None:intergenic |
| GAACAGGACCTGCGGCGGAT+GGG | 0.538425 | 6.2:+542130 | MS.gene053080:CDS |
| GATTTACTCCCATCCGCCGC+AGG | 0.541197 | 6.2:-542138 | None:intergenic |
| TTACTGACGGCTTGTCTCCA+CGG | 0.541347 | 6.2:-542252 | None:intergenic |
| AGAACCTAATGATGGTTTGG+AGG | 0.543260 | 6.2:+542276 | MS.gene053080:CDS |
| CGAAGTTGAAAATGCAATGT+GGG | 0.549326 | 6.2:+542825 | MS.gene053080:CDS |
| CAAACCGCTAAAGGCATCCA+TGG | 0.549768 | 6.2:-543028 | None:intergenic |
| TGAAGCTTGGGACAGTGACT+AGG | 0.557695 | 6.2:+543179 | MS.gene053080:CDS |
| GCTGTCAACATCACTGTCAT+CGG | 0.559876 | 6.2:-542623 | None:intergenic |
| AATGTTGTGCCTTTAGGACA+AGG | 0.561411 | 6.2:+538904 | MS.gene053080:CDS |
| TAAAGAATATGAAGCTGAAG+AGG | 0.562743 | 6.2:+542363 | MS.gene053080:CDS |
| TGGAACAGAGAAGAGTATGG+TGG | 0.564267 | 6.2:+542421 | MS.gene053080:CDS |
| TTTCTTTAATTCTTTCCTTG+GGG | 0.565613 | 6.2:-541391 | None:intergenic |
| AATGCACCAAAGAGTTTGAG+AGG | 0.565918 | 6.2:+542970 | MS.gene053080:CDS |
| TCATTAGGTTCTATTACTGA+CGG | 0.569181 | 6.2:-542265 | None:intergenic |
| TCGGTTCATCGCTGATATAG+AGG | 0.570941 | 6.2:+542330 | MS.gene053080:CDS |
| TGAAAATGCAATGTGGGAGT+CGG | 0.574987 | 6.2:+542831 | MS.gene053080:CDS |
| CGGGGAATGTCAACGATGAG+AGG | 0.581892 | 6.2:+539027 | MS.gene053080:CDS |
| TCAGTAATAGAACCTAATGA+TGG | 0.582255 | 6.2:+542268 | MS.gene053080:CDS |
| AGCTTCATATTCTTTATCGG+CGG | 0.584618 | 6.2:-542356 | None:intergenic |
| AACTTATGACTGACGAGGAG+CGG | 0.586837 | 6.2:+539142 | MS.gene053080:CDS |
| ACCAAAGAGTTTGAGAGGCA+GGG | 0.588416 | 6.2:+542975 | MS.gene053080:CDS |
| AATAATACAAGTATTGGCAA+TGG | 0.589479 | 6.2:+542712 | MS.gene053080:CDS |
| TCTAGAAATGATGACTATGA+TGG | 0.589821 | 6.2:+542466 | MS.gene053080:CDS |
| TCCTGAGGATCCAACTGCAA+TGG | 0.592648 | 6.2:+542159 | MS.gene053080:CDS |
| AGGAAAGAGTATGCGAAGCA+AGG | 0.594524 | 6.2:+539047 | MS.gene053080:CDS |
| GACTGGATGTCCCAATCAGA+AGG | 0.597113 | 6.2:+543054 | MS.gene053080:CDS |
| CGTTGACATTCCCCGACACA+AGG | 0.600701 | 6.2:-539019 | None:intergenic |
| AGCAGCAGCAGCGATGATGA+GGG | 0.601546 | 6.2:+542910 | MS.gene053080:CDS |
| TGCTTGCAAGACTGAGTGGT+GGG | 0.602807 | 6.2:+541423 | MS.gene053080:CDS |
| TAATACCCTTACAAAGAGGA+AGG | 0.604277 | 6.2:+541529 | MS.gene053080:CDS |
| AGAATATACATCCCAAGCAT+CGG | 0.605468 | 6.2:+542515 | MS.gene053080:CDS |
| AAAACTATTACGATATTGAG+CGG | 0.607700 | 6.2:-542947 | None:intergenic |
| CAGTCTCATGAAACTTCCAA+TGG | 0.613298 | 6.2:-541346 | None:intergenic |
| GTAGGTTCAAGGAAAGTAGG+GGG | 0.613514 | 6.2:+542674 | MS.gene053080:CDS |
| AATGACTCGGTACATTTGAG+AGG | 0.617243 | 6.2:+542865 | MS.gene053080:CDS |
| AGCTCTGGATCATGCCGTGG+TGG | 0.620706 | 6.2:-541212 | None:intergenic |
| GATGGCTCTGATGAAGCTAG+AGG | 0.623735 | 6.2:+542652 | MS.gene053080:CDS |
| TTAAATGGATCCTTGTGTCG+GGG | 0.627157 | 6.2:+539009 | MS.gene053080:CDS |
| GTTGGCGGTAATTTCTACCA+CGG | 0.628009 | 6.2:-541487 | None:intergenic |
| GATGTCCCAATCAGAAGGTG+AGG | 0.630183 | 6.2:+543059 | MS.gene053080:CDS |
| GTCCCAATCAGAAGGTGAGG+AGG | 0.630743 | 6.2:+543062 | MS.gene053080:CDS |
| CCATAAGAAGAGATCACCAA+AGG | 0.633775 | 6.2:+543149 | MS.gene053080:CDS |
| TTGTTGTGACAACTTCCCCA+AGG | 0.637735 | 6.2:+541376 | MS.gene053080:CDS |
| GAAGGTGAGGAGGACTCAAG+AGG | 0.641359 | 6.2:+543072 | MS.gene053080:CDS |
| AATGGCCAGCATCCAAAGAG+TGG | 0.641691 | 6.2:+542177 | MS.gene053080:CDS |
| TCAATGCTTGCAAGACTGAG+TGG | 0.642842 | 6.2:+541419 | MS.gene053080:CDS |
| GGTAGGTTCAAGGAAAGTAG+GGG | 0.644041 | 6.2:+542673 | MS.gene053080:CDS |
| TACAAGTCAAAATAGTAAGG+TGG | 0.645026 | 6.2:+543113 | MS.gene053080:CDS |
| AATGGTGGTCAGAGCAGACA+CGG | 0.648459 | 6.2:+542742 | MS.gene053080:CDS |
| ACGACGACGACGATGGTGAG+TGG | 0.649974 | 6.2:+542584 | MS.gene053080:CDS |
| GGTGAGGAGGACTCAAGAGG+TGG | 0.651623 | 6.2:+543075 | MS.gene053080:CDS |
| AAAACAATCATCATGTTCCG+TGG | 0.652160 | 6.2:+541470 | MS.gene053080:CDS |
| GGCAATGGTCAAGTTAATGG+TGG | 0.652521 | 6.2:+542727 | MS.gene053080:CDS |
| CTATTAATACCCTTACAAAG+AGG | 0.653915 | 6.2:+541525 | MS.gene053080:CDS |
| GCTCTGATGAAGCTAGAGGT+AGG | 0.654685 | 6.2:+542656 | MS.gene053080:CDS |
| AAATAGAACAGGACCTGCGG+CGG | 0.657187 | 6.2:+542125 | MS.gene053080:CDS |
| AGAAAATAGAACAGGACCTG+CGG | 0.664826 | 6.2:+542122 | MS.gene053080:CDS |
| TACCGGAGCTGCCTCCACCA+CGG | 0.667902 | 6.2:+541198 | MS.gene053080:CDS |
| GCTAAAGGCATCCATGGACA+CGG | 0.670630 | 6.2:-543022 | None:intergenic |
| GGAAGTCCTTATGTTAACCG+TGG | 0.676008 | 6.2:+542235 | MS.gene053080:CDS |
| GCGAAGTTGAAAATGCAATG+TGG | 0.678148 | 6.2:+542824 | MS.gene053080:CDS |
| CCATGGACACGGATTTAGTG+CGG | 0.681554 | 6.2:-543011 | None:intergenic |
| AAAGAGTATGCGAAGCAAGG+TGG | 0.683453 | 6.2:+539050 | MS.gene053080:CDS |
| AAATGATGACTATGATGGTG+AGG | 0.683700 | 6.2:+542471 | MS.gene053080:CDS |
| GGATTTGGAGGACAATGACT+CGG | 0.695707 | 6.2:+542852 | MS.gene053080:CDS |
| AAGAGCTCTGGATCATGCCG+TGG | 0.696702 | 6.2:-541215 | None:intergenic |
| ATGCTTGCAAGACTGAGTGG+TGG | 0.703573 | 6.2:+541422 | MS.gene053080:CDS |
| GCGGATGGGAGTAAATCCTG+AGG | 0.727364 | 6.2:+542144 | MS.gene053080:CDS |
| GAAGAAACTTATGACTGACG+AGG | 0.727589 | 6.2:+539137 | MS.gene053080:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTAAAAATATAAACTTTA+AGG | - | chr6.2:538735-538754 | None:intergenic | 10.0% |
| !!! | ATATTTTTGATTTAATTAGT+TGG | - | chr6.2:539884-539903 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTACTAAGAT+TGG | + | chr6.2:538787-538806 | MS.gene053080:intron | 10.0% |
| !! | ATAAACAAAAAATCTACAAA+AGG | - | chr6.2:539775-539794 | None:intergenic | 15.0% |
| !! | GTATTATATTAGTAATTTGA+AGG | - | chr6.2:541818-541837 | None:intergenic | 15.0% |
| !!! | AATTATCATTTTCATTACTT+TGG | - | chr6.2:539533-539552 | None:intergenic | 15.0% |
| !!! | ATTAATAGGTATCAAATTTT+TGG | - | chr6.2:541513-541532 | None:intergenic | 15.0% |
| !!! | TACATTTGTTAATTGTTAAT+TGG | + | chr6.2:538812-538831 | MS.gene053080:intron | 15.0% |
| !!! | TCTACTACAATTTTTATTTT+TGG | - | chr6.2:539942-539961 | None:intergenic | 15.0% |
| !!! | TCTCAATTAAAATTGTTTTA+CGG | + | chr6.2:540359-540378 | MS.gene053080:intron | 15.0% |
| !!! | TTAATAGGTATCAAATTTTT+GGG | - | chr6.2:541512-541531 | None:intergenic | 15.0% |
| !! | AAAAACAGTAGTATTGTTTA+AGG | - | chr6.2:540600-540619 | None:intergenic | 20.0% |
| !! | AAACATAAAGAAAATAGAAC+AGG | + | chr6.2:542114-542133 | MS.gene053080:CDS | 20.0% |
| !! | AACGTGATATACTTAAAATT+TGG | - | chr6.2:539434-539453 | None:intergenic | 20.0% |
| !! | AATCATAAACTGTCATATTT+AGG | + | chr6.2:541567-541586 | MS.gene053080:intron | 20.0% |
| !! | ACAATTACTTAAAACTGATA+AGG | - | chr6.2:540893-540912 | None:intergenic | 20.0% |
| !! | AGGATAAATAATACAAGTAT+TGG | + | chr6.2:542706-542725 | MS.gene053080:CDS | 20.0% |
| !! | ATTGTAAATGTTGTATAGAT+AGG | + | chr6.2:540540-540559 | MS.gene053080:intron | 20.0% |
| !! | ATTGTTAATTGGTATTTCAT+AGG | + | chr6.2:538823-538842 | MS.gene053080:intron | 20.0% |
| !! | ATTTCTTTAATTCTTTCCTT+GGG | - | chr6.2:541395-541414 | None:intergenic | 20.0% |
| !! | GAATACAAAATTGAAGTAAA+CGG | - | chr6.2:538676-538695 | None:intergenic | 20.0% |
| !! | GATTTATGTATTCGAATTTA+TGG | + | chr6.2:539290-539309 | MS.gene053080:intron | 20.0% |
| !! | TAGACATTAGAAAGTTTAAT+TGG | + | chr6.2:539468-539487 | MS.gene053080:intron | 20.0% |
| !!! | AAAATTGTTTTACGGTTTAA+AGG | + | chr6.2:540367-540386 | MS.gene053080:intron | 20.0% |
| !!! | TAACTGATAATGAACAATAT+TGG | - | chr6.2:541595-541614 | None:intergenic | 20.0% |
| ! | AAAACTATTACGATATTGAG+CGG | - | chr6.2:542950-542969 | None:intergenic | 25.0% |
| ! | AAAATTGAAGTAAACGGAAA+AGG | - | chr6.2:538670-538689 | None:intergenic | 25.0% |
| ! | AAATTGAAGTAAACGGAAAA+GGG | - | chr6.2:538669-538688 | None:intergenic | 25.0% |
| ! | AACAATAAAAGCTATCGTTA+TGG | - | chr6.2:538969-538988 | None:intergenic | 25.0% |
| ! | AATTGGTATTTCATAGGAAT+AGG | + | chr6.2:538829-538848 | MS.gene053080:intron | 25.0% |
| ! | AATTGTTAAGATTAGAACAG+GGG | - | chr6.2:539388-539407 | None:intergenic | 25.0% |
| ! | ATTATACCAAACCTTTATAC+AGG | + | chr6.2:539975-539994 | MS.gene053080:intron | 25.0% |
| ! | CAACTTATGTTGTAAAGTAT+TGG | + | chr6.2:540444-540463 | MS.gene053080:intron | 25.0% |
| ! | CAAGAATTTAACTACTTCAT+TGG | + | chr6.2:540938-540957 | MS.gene053080:intron | 25.0% |
| ! | CAAGGAAAGAATTAAAGAAA+TGG | + | chr6.2:541394-541413 | MS.gene053080:CDS | 25.0% |
| ! | CAATGAAGTAGTTAAATTCT+TGG | - | chr6.2:540940-540959 | None:intergenic | 25.0% |
| ! | CAATTGTTAAGATTAGAACA+GGG | - | chr6.2:539389-539408 | None:intergenic | 25.0% |
| ! | CATTTCTTTAATTCTTTCCT+TGG | - | chr6.2:541396-541415 | None:intergenic | 25.0% |
| ! | CTGTTCTAATCTTAACAATT+GGG | + | chr6.2:539388-539407 | MS.gene053080:intron | 25.0% |
| ! | GATCCATTTAAAAGATTCAA+CGG | - | chr6.2:539000-539019 | None:intergenic | 25.0% |
| ! | GTATTCGAATTTATGGTTTA+AGG | + | chr6.2:539297-539316 | MS.gene053080:intron | 25.0% |
| ! | GTTTAATAGATACCATAACT+AGG | - | chr6.2:541995-542014 | None:intergenic | 25.0% |
| ! | TTCAGCTTCATATTCTTTAT+CGG | - | chr6.2:542362-542381 | None:intergenic | 25.0% |
| ! | TTGTTACCGTTATTATATAC+AGG | + | chr6.2:542045-542064 | MS.gene053080:intron | 25.0% |
| ! | TTTCTTTAATTCTTTCCTTG+GGG | - | chr6.2:541394-541413 | None:intergenic | 25.0% |
| !! | AAACCGTTGAATCTTTTAAA+TGG | + | chr6.2:538994-539013 | MS.gene053080:CDS | 25.0% |
| !! | TGAAAATGCTTTTGTGATTA+TGG | - | chr6.2:541702-541721 | None:intergenic | 25.0% |
| !! | TGATTGACTTTAATGTTTCA+AGG | + | chr6.2:541954-541973 | MS.gene053080:intron | 25.0% |
| !! | TGGCATTTTCTTTTTATTAG+CGG | - | chr6.2:539414-539433 | None:intergenic | 25.0% |
| !! | TGTATCTTTTCTCTCTTTTA+TGG | - | chr6.2:539915-539934 | None:intergenic | 25.0% |
| !! | TTGAAAGTAAACAGTAGTTT+TGG | + | chr6.2:541624-541643 | MS.gene053080:intron | 25.0% |
| !! | TTTAAGGAAAAAGCGTAAAA+GGG | - | chr6.2:538719-538738 | None:intergenic | 25.0% |
| !!! | AAGTTTATTCAAGCTGATTT+TGG | + | chr6.2:540517-540536 | MS.gene053080:intron | 25.0% |
| !!! | AATAATACAAGTATTGGCAA+TGG | + | chr6.2:542712-542731 | MS.gene053080:CDS | 25.0% |
| !!! | ACAATTTTAATTGAGAAGCA+CGG | - | chr6.2:540355-540374 | None:intergenic | 25.0% |
| !!! | ATTCGATGTTTTTGTCTTTT+TGG | + | chr6.2:538875-538894 | MS.gene053080:intron | 25.0% |
| !!! | GTCTATGTTTAATTTTGTTG+TGG | + | chr6.2:541068-541087 | MS.gene053080:intron | 25.0% |
| !!! | TACAAGTTTGTTATAAGTTG+TGG | - | chr6.2:540745-540764 | None:intergenic | 25.0% |
| AAAATAGACATGGAACTGTT+AGG | + | chr6.2:539606-539625 | MS.gene053080:intron | 30.0% | |
| AAAGAATTTGGTCCTAGTTA+TGG | + | chr6.2:541980-541999 | MS.gene053080:intron | 30.0% | |
| AAAGCCTTCTTAAACACTTT+AGG | + | chr6.2:539362-539381 | MS.gene053080:intron | 30.0% | |
| AACAAGAATTATGTTCCAGT+TGG | + | chr6.2:541281-541300 | MS.gene053080:CDS | 30.0% | |
| AAGAGTCTGGTAAAACATTA+AGG | + | chr6.2:539088-539107 | MS.gene053080:CDS | 30.0% | |
| AAGTTGAAAGAGAGATGAAA+TGG | - | chr6.2:538624-538643 | None:intergenic | 30.0% | |
| AATAGAACCTAATGATGGTT+TGG | + | chr6.2:542273-542292 | MS.gene053080:CDS | 30.0% | |
| ACAAACTTGTATGACAATTC+TGG | + | chr6.2:540754-540773 | MS.gene053080:intron | 30.0% | |
| ACATTATGAGTATAGAAGCT+GGG | + | chr6.2:539670-539689 | MS.gene053080:intron | 30.0% | |
| ACTAACGAAAGAACATTTGA+TGG | - | chr6.2:541752-541771 | None:intergenic | 30.0% | |
| AGAGTCTGGTAAAACATTAA+GGG | + | chr6.2:539089-539108 | MS.gene053080:CDS | 30.0% | |
| AGAGTGATTCAAAATAGACA+TGG | + | chr6.2:539596-539615 | MS.gene053080:intron | 30.0% | |
| AGTTGAAAGAGAGATGAAAT+GGG | - | chr6.2:538623-538642 | None:intergenic | 30.0% | |
| AGTTTGGAAGACTTAGATAT+TGG | + | chr6.2:542401-542420 | MS.gene053080:CDS | 30.0% | |
| ATAGGGCCTGTATATAATAA+CGG | - | chr6.2:542054-542073 | None:intergenic | 30.0% | |
| ATCATAAGGGGATAATTTGA+TGG | + | chr6.2:539566-539585 | MS.gene053080:intron | 30.0% | |
| CAACATCTCAAAGCAATATA+TGG | - | chr6.2:539260-539279 | None:intergenic | 30.0% | |
| CCAATTGTTAAGATTAGAAC+AGG | - | chr6.2:539390-539409 | None:intergenic | 30.0% | |
| CCTGTTCTAATCTTAACAAT+TGG | + | chr6.2:539387-539406 | MS.gene053080:intron | 30.0% | |
| CTAAAATTACTGTTTGCTCT+TGG | + | chr6.2:541911-541930 | MS.gene053080:intron | 30.0% | |
| CTAATATAATACACACTCAG+TGG | + | chr6.2:541826-541845 | MS.gene053080:intron | 30.0% | |
| CTATTAATACCCTTACAAAG+AGG | + | chr6.2:541525-541544 | MS.gene053080:CDS | 30.0% | |
| CTTCAGGCGTATAAAAAAAT+TGG | + | chr6.2:541251-541270 | MS.gene053080:CDS | 30.0% | |
| GTTTCAAGGACAAAAGAATT+TGG | + | chr6.2:541968-541987 | MS.gene053080:intron | 30.0% | |
| TAAAGAATATGAAGCTGAAG+AGG | + | chr6.2:542363-542382 | MS.gene053080:CDS | 30.0% | |
| TAATGTAAGACACACATTCA+AGG | - | chr6.2:541784-541803 | None:intergenic | 30.0% | |
| TACAAGTCAAAATAGTAAGG+TGG | + | chr6.2:543113-543132 | MS.gene053080:CDS | 30.0% | |
| TACATTATGAGTATAGAAGC+TGG | + | chr6.2:539669-539688 | MS.gene053080:intron | 30.0% | |
| TCAGTAATAGAACCTAATGA+TGG | + | chr6.2:542268-542287 | MS.gene053080:CDS | 30.0% | |
| TCATTAGGTTCTATTACTGA+CGG | - | chr6.2:542268-542287 | None:intergenic | 30.0% | |
| TCTAGAAATGATGACTATGA+TGG | + | chr6.2:542466-542485 | MS.gene053080:CDS | 30.0% | |
| TGATGCATGATTGATCATAA+GGG | + | chr6.2:539553-539572 | MS.gene053080:intron | 30.0% | |
| TGTTCTTTCGTTAGTTAGTT+TGG | + | chr6.2:541757-541776 | MS.gene053080:intron | 30.0% | |
| TTGATGCATGATTGATCATA+AGG | + | chr6.2:539552-539571 | MS.gene053080:intron | 30.0% | |
| TTGTGAACATTCAGAAGTTT+CGG | + | chr6.2:541863-541882 | MS.gene053080:intron | 30.0% | |
| TTGTGATTATGGTCAATTCA+AGG | - | chr6.2:541691-541710 | None:intergenic | 30.0% | |
| TTTCTTCTGAATTCTGATCT+GGG | + | chr6.2:540248-540267 | MS.gene053080:intron | 30.0% | |
| ! | AGAAATTATTGCCGCAATTT+TGG | - | chr6.2:540118-540137 | None:intergenic | 30.0% |
| ! | AGCTAAATTTAGGACGAATA+TGG | + | chr6.2:542768-542787 | MS.gene053080:CDS | 30.0% |
| ! | AGTTCTCTTTGTTCTAAATG+TGG | - | chr6.2:540094-540113 | None:intergenic | 30.0% |
| ! | CTTTAAGGAAAAAGCGTAAA+AGG | - | chr6.2:538720-538739 | None:intergenic | 30.0% |
| ! | CTTTATCCTTTATTTGTGTG+TGG | + | chr6.2:540187-540206 | MS.gene053080:intron | 30.0% |
| ! | GAAATTATTGCCGCAATTTT+GGG | - | chr6.2:540117-540136 | None:intergenic | 30.0% |
| ! | GCTAAATTTAGGACGAATAT+GGG | + | chr6.2:542769-542788 | MS.gene053080:CDS | 30.0% |
| ! | TTAAGGAAAAAGCGTAAAAG+GGG | - | chr6.2:538718-538737 | None:intergenic | 30.0% |
| ! | TTTTAAATGGATCCTTGTGT+CGG | + | chr6.2:539007-539026 | MS.gene053080:CDS | 30.0% |
| !! | CTCTTTGTAAGGGTATTAAT+AGG | - | chr6.2:541527-541546 | None:intergenic | 30.0% |
| !! | TGGCGATTTTAACAAAATTG+AGG | + | chr6.2:540774-540793 | MS.gene053080:intron | 30.0% |
| !! | TTTTGTTTATCTTGCCATCA+CGG | + | chr6.2:539785-539804 | MS.gene053080:intron | 30.0% |
| !!! | ACCTTACTATTTTGACTTGT+AGG | - | chr6.2:543114-543133 | None:intergenic | 30.0% |
| !!! | CACAAAAGCATTTTCAAATG+TGG | + | chr6.2:541706-541725 | MS.gene053080:intron | 30.0% |
| !!! | CCTTACTATTTTGACTTGTA+GGG | - | chr6.2:543113-543132 | None:intergenic | 30.0% |
| !!! | GCTTGAAAATTTTCAAGTCA+CGG | - | chr6.2:540999-541018 | None:intergenic | 30.0% |
| !!! | TAGGTATCAAATTTTTGGGT+TGG | - | chr6.2:541508-541527 | None:intergenic | 30.0% |
| AAAACAATCATCATGTTCCG+TGG | + | chr6.2:541470-541489 | MS.gene053080:CDS | 35.0% | |
| AAAGAGAACTCCCAAAATTG+CGG | + | chr6.2:540104-540123 | MS.gene053080:intron | 35.0% | |
| AAAGCGTAAAAGGGGTTTAA+GGG | - | chr6.2:538710-538729 | None:intergenic | 35.0% | |
| AACTTCAATCCAATCTCTTC+AGG | + | chr6.2:538639-538658 | MS.gene053080:CDS | 35.0% | |
| AAGCTTCCTGTATAAAGGTT+TGG | - | chr6.2:539984-540003 | None:intergenic | 35.0% | |
| AATGCCATTGACAAGAAAGA+TGG | + | chr6.2:542214-542233 | MS.gene053080:CDS | 35.0% | |
| ACAACCTTAGACTAGAATCT+TGG | - | chr6.2:538764-538783 | None:intergenic | 35.0% | |
| ACTTCCATCTTTCTTGTCAA+TGG | - | chr6.2:542221-542240 | None:intergenic | 35.0% | |
| AGAATATACATCCCAAGCAT+CGG | + | chr6.2:542515-542534 | MS.gene053080:CDS | 35.0% | |
| AGCTTCATATTCTTTATCGG+CGG | - | chr6.2:542359-542378 | None:intergenic | 35.0% | |
| ATCTTACCTTCCTCTTTGTA+AGG | - | chr6.2:541538-541557 | None:intergenic | 35.0% | |
| ATTGAGATTCTGTCAAGAAG+GGG | + | chr6.2:539629-539648 | MS.gene053080:intron | 35.0% | |
| ATTGGCAATGGTCAAGTTAA+TGG | + | chr6.2:542724-542743 | MS.gene053080:CDS | 35.0% | |
| CCCTACAAGTCAAAATAGTA+AGG | + | chr6.2:543110-543129 | MS.gene053080:CDS | 35.0% | |
| CGAAGTTGAAAATGCAATGT+GGG | + | chr6.2:542825-542844 | MS.gene053080:CDS | 35.0% | |
| GATGCATGATTGATCATAAG+GGG | + | chr6.2:539554-539573 | MS.gene053080:intron | 35.0% | |
| GATTGAGATTCTGTCAAGAA+GGG | + | chr6.2:539628-539647 | MS.gene053080:intron | 35.0% | |
| GCTTAAGAAATATGAGCTAC+CGG | + | chr6.2:541181-541200 | MS.gene053080:CDS | 35.0% | |
| GGCCAAAGTTATGAAAGTTT+GGG | + | chr6.2:540269-540288 | MS.gene053080:intron | 35.0% | |
| GTCGACAAACAGTTATTAGA+CGG | - | chr6.2:539206-539225 | None:intergenic | 35.0% | |
| GTGAAAGTAGTAAGCAGAAT+TGG | + | chr6.2:540656-540675 | MS.gene053080:intron | 35.0% | |
| GTGTCTTACATTAGTCAGTT+TGG | + | chr6.2:541791-541810 | MS.gene053080:intron | 35.0% | |
| GTTTCTTCTGAATTCTGATC+TGG | + | chr6.2:540247-540266 | MS.gene053080:intron | 35.0% | |
| TAATACCCTTACAAAGAGGA+AGG | + | chr6.2:541529-541548 | MS.gene053080:CDS | 35.0% | |
| TATTGGAACAGAGAAGAGTA+TGG | + | chr6.2:542418-542437 | MS.gene053080:CDS | 35.0% | |
| TCAGACAAAATTAAACGCTG+TGG | + | chr6.2:540140-540159 | MS.gene053080:intron | 35.0% | |
| TCGACAAACAGTTATTAGAC+GGG | - | chr6.2:539205-539224 | None:intergenic | 35.0% | |
| TCTTACCTTCCTCTTTGTAA+GGG | - | chr6.2:541537-541556 | None:intergenic | 35.0% | |
| TGCAAAATATGCATCTCCAT+TGG | + | chr6.2:541330-541349 | MS.gene053080:CDS | 35.0% | |
| TTATATACAGGCCCTATTCA+AGG | + | chr6.2:542057-542076 | MS.gene053080:intron | 35.0% | |
| TTCACCAAGATTCTAGTCTA+AGG | + | chr6.2:538757-538776 | MS.gene053080:intron | 35.0% | |
| TTCAGAAATGTTGTGCCTTT+AGG | + | chr6.2:538898-538917 | MS.gene053080:intron | 35.0% | |
| TTTAAATGGATCCTTGTGTC+GGG | + | chr6.2:539008-539027 | MS.gene053080:CDS | 35.0% | |
| TTTGTTTATCTTGCCATCAC+GGG | + | chr6.2:539786-539805 | MS.gene053080:intron | 35.0% | |
| ! | AAAAGCGTAAAAGGGGTTTA+AGG | - | chr6.2:538711-538730 | None:intergenic | 35.0% |
| ! | AAATGATGACTATGATGGTG+AGG | + | chr6.2:542471-542490 | MS.gene053080:CDS | 35.0% |
| ! | ATCCTTTATTTGTGTGTGGT+CGG | + | chr6.2:540191-540210 | MS.gene053080:intron | 35.0% |
| ! | GATGTTGACAGCAATTTTGA+TGG | + | chr6.2:542634-542653 | MS.gene053080:CDS | 35.0% |
| ! | TCCAAACTCTTCCTTTTCTT+TGG | - | chr6.2:542389-542408 | None:intergenic | 35.0% |
| ! | TCTTTGTTCTAAATGTGGCA+TGG | - | chr6.2:540089-540108 | None:intergenic | 35.0% |
| ! | TGATGGACAAAACTGACTAA+CGG | - | chr6.2:541735-541754 | None:intergenic | 35.0% |
| ! | TTTGTTATAAGTTGTGGCCA+TGG | - | chr6.2:540739-540758 | None:intergenic | 35.0% |
| ! | TTTTACGGTTTAAAGGCTCA+TGG | + | chr6.2:540374-540393 | MS.gene053080:intron | 35.0% |
| ! | TTTTAGTCCCTAAATGTGTG+AGG | - | chr6.2:541897-541916 | None:intergenic | 35.0% |
| !! | TTTTAATTGAGAAGCACGGT+GGG | - | chr6.2:540351-540370 | None:intergenic | 35.0% |
| !!! | ATTTTAATTGAGAAGCACGG+TGG | - | chr6.2:540352-540371 | None:intergenic | 35.0% |
| !!! | GTATCAAATTTTTGGGTTGG+CGG | - | chr6.2:541505-541524 | None:intergenic | 35.0% |
| AAAGGAAGCTGATGAAGCTT+GGG | + | chr6.2:543167-543186 | MS.gene053080:CDS | 40.0% | |
| AAGGGTTTACCTGAAGAGAT+TGG | - | chr6.2:538651-538670 | None:intergenic | 40.0% | |
| AATGCACCAAAGAGTTTGAG+AGG | + | chr6.2:542970-542989 | MS.gene053080:CDS | 40.0% | |
| ACAAAAGGCTAGCGAAAACA+TGG | - | chr6.2:539760-539779 | None:intergenic | 40.0% | |
| AGAAAATAGAACAGGACCTG+CGG | + | chr6.2:542122-542141 | MS.gene053080:CDS | 40.0% | |
| AGAAGAATGCAGAAAGAGTC+TGG | + | chr6.2:539075-539094 | MS.gene053080:CDS | 40.0% | |
| AGCTCAAGCTTCCTGTATAA+AGG | - | chr6.2:539989-540008 | None:intergenic | 40.0% | |
| AGGTAGGTTCAAGGAAAGTA+GGG | + | chr6.2:542672-542691 | MS.gene053080:CDS | 40.0% | |
| ATGGTCAATTCAAGGACTAC+AGG | - | chr6.2:541683-541702 | None:intergenic | 40.0% | |
| ATTCTCTTCATCGTCGCTAT+CGG | - | chr6.2:542545-542564 | None:intergenic | 40.0% | |
| CAGTCTCATGAAACTTCCAA+TGG | - | chr6.2:541349-541368 | None:intergenic | 40.0% | |
| CCATAAGAAGAGATCACCAA+AGG | + | chr6.2:543149-543168 | MS.gene053080:CDS | 40.0% | |
| GAAGAAACTTATGACTGACG+AGG | + | chr6.2:539137-539156 | MS.gene053080:CDS | 40.0% | |
| GACACGGTGAAGCTAAATTT+AGG | + | chr6.2:542758-542777 | MS.gene053080:CDS | 40.0% | |
| GACACTACCTCACACATTTA+GGG | + | chr6.2:541887-541906 | MS.gene053080:intron | 40.0% | |
| GATTCCTCCAAACCATCATT+AGG | - | chr6.2:542283-542302 | None:intergenic | 40.0% | |
| GCCAAAGAAAAGGAAGAGTT+TGG | + | chr6.2:542385-542404 | MS.gene053080:CDS | 40.0% | |
| GCGAAGTTGAAAATGCAATG+TGG | + | chr6.2:542824-542843 | MS.gene053080:CDS | 40.0% | |
| GGATTGAGATTCTGTCAAGA+AGG | + | chr6.2:539627-539646 | MS.gene053080:intron | 40.0% | |
| GGCCCAAACTTTCATAACTT+TGG | - | chr6.2:540274-540293 | None:intergenic | 40.0% | |
| GGGCCAAAGTTATGAAAGTT+TGG | + | chr6.2:540268-540287 | MS.gene053080:intron | 40.0% | |
| GTATAGAAGCTGGGTTTAAC+AGG | + | chr6.2:539679-539698 | MS.gene053080:intron | 40.0% | |
| GTGCTCGTTATATGATCTCT+TGG | + | chr6.2:541090-541109 | MS.gene053080:intron | 40.0% | |
| TGAAAATGCAATGTGGGAGT+CGG | + | chr6.2:542831-542850 | MS.gene053080:CDS | 40.0% | |
| TGACACTACCTCACACATTT+AGG | + | chr6.2:541886-541905 | MS.gene053080:intron | 40.0% | |
| TGCTCTATTCCTTGTCCTAA+AGG | - | chr6.2:538916-538935 | None:intergenic | 40.0% | |
| TGGTAAAGCTTTCGTCAATG+CGG | - | chr6.2:540046-540065 | None:intergenic | 40.0% | |
| TTAAATGGATCCTTGTGTCG+GGG | + | chr6.2:539009-539028 | MS.gene053080:CDS | 40.0% | |
| TTGTCTCCACGGTTAACATA+AGG | - | chr6.2:542244-542263 | None:intergenic | 40.0% | |
| TTGTTTATCTTGCCATCACG+GGG | + | chr6.2:539787-539806 | MS.gene053080:intron | 40.0% | |
| TTTATACGCCTGAAGCTGTT+CGG | - | chr6.2:541246-541265 | None:intergenic | 40.0% | |
| TTTATTTGTGTGTGGTCGGT+GGG | + | chr6.2:540195-540214 | MS.gene053080:intron | 40.0% | |
| TTTGCCTGCAAACAGTTGAA+GGG | - | chr6.2:541134-541153 | None:intergenic | 40.0% | |
| ! | AGAACCTAATGATGGTTTGG+AGG | + | chr6.2:542276-542295 | MS.gene053080:CDS | 40.0% |
| ! | AGAGAGATGAAATGGGTTTG+AGG | - | chr6.2:538616-538635 | None:intergenic | 40.0% |
| ! | CCTTTGGTGATCTCTTCTTA+TGG | - | chr6.2:543152-543171 | None:intergenic | 40.0% |
| ! | GAGAGATGAAATGGGTTTGA+GGG | - | chr6.2:538615-538634 | None:intergenic | 40.0% |
| ! | GTCAATGGCATTGAAGAAAG+TGG | - | chr6.2:542206-542225 | None:intergenic | 40.0% |
| ! | TTCAAGAGCTTGCTCAAATC+TGG | - | chr6.2:542083-542102 | None:intergenic | 40.0% |
| ! | TTTAATTGAGAAGCACGGTG+GGG | - | chr6.2:540350-540369 | None:intergenic | 40.0% |
| !! | AATGACTCGGTACATTTGAG+AGG | + | chr6.2:542865-542884 | MS.gene053080:CDS | 40.0% |
| !! | AATGTTGTGCCTTTAGGACA+AGG | + | chr6.2:538904-538923 | MS.gene053080:CDS | 40.0% |
| !! | CTCAAATCTGGCCTTGAATA+GGG | - | chr6.2:542071-542090 | None:intergenic | 40.0% |
| !! | TGGGTTTAACAGGTGTTGAA+TGG | + | chr6.2:539689-539708 | MS.gene053080:intron | 40.0% |
| AACTTATGACTGACGAGGAG+CGG | + | chr6.2:539142-539161 | MS.gene053080:CDS | 45.0% | |
| AAGAATGCGTGCATGTGTAC+TGG | + | chr6.2:540826-540845 | MS.gene053080:intron | 45.0% | |
| AATACTCCACGAACACCAAC+TGG | - | chr6.2:541299-541318 | None:intergenic | 45.0% | |
| ACCAAAGAGTTTGAGAGGCA+GGG | + | chr6.2:542975-542994 | MS.gene053080:CDS | 45.0% | |
| ACTTTGATGCCTGTGCGAAA+TGG | + | chr6.2:540696-540715 | MS.gene053080:intron | 45.0% | |
| AGAAAGTGGAAGCCACTCTT+TGG | - | chr6.2:542192-542211 | None:intergenic | 45.0% | |
| AGAATCGAACTTCGTGATCG+AGG | - | chr6.2:540169-540188 | None:intergenic | 45.0% | |
| AGCTGAAGAGGCCAAAGAAA+AGG | + | chr6.2:542375-542394 | MS.gene053080:CDS | 45.0% | |
| AGGTTAGAGGCTCAAGAGTT+CGG | + | chr6.2:542491-542510 | MS.gene053080:CDS | 45.0% | |
| CAAAGGAAGCTGATGAAGCT+TGG | + | chr6.2:543166-543185 | MS.gene053080:CDS | 45.0% | |
| CAAGCTTCATCAGCTTCCTT+TGG | - | chr6.2:543168-543187 | None:intergenic | 45.0% | |
| CACCGACCACACACAAATAA+AGG | - | chr6.2:540196-540215 | None:intergenic | 45.0% | |
| CTGAACAGGAAGAGCTAGAT+CGG | + | chr6.2:542311-542330 | MS.gene053080:CDS | 45.0% | |
| CTTTCGTCAATGCGGTTTCA+GGG | - | chr6.2:540038-540057 | None:intergenic | 45.0% | |
| CTTTGATGCCTGTGCGAAAT+GGG | + | chr6.2:540697-540716 | MS.gene053080:intron | 45.0% | |
| CTTTGCCTGCAAACAGTTGA+AGG | - | chr6.2:541135-541154 | None:intergenic | 45.0% | |
| GAGGTAGGTTCAAGGAAAGT+AGG | + | chr6.2:542671-542690 | MS.gene053080:CDS | 45.0% | |
| GCTGTCAACATCACTGTCAT+CGG | - | chr6.2:542626-542645 | None:intergenic | 45.0% | |
| GGAAGTCCTTATGTTAACCG+TGG | + | chr6.2:542235-542254 | MS.gene053080:CDS | 45.0% | |
| GGATTTGGAGGACAATGACT+CGG | + | chr6.2:542852-542871 | MS.gene053080:CDS | 45.0% | |
| GGCAAGTTCAAGTGTTTCCA+TGG | + | chr6.2:540719-540738 | MS.gene053080:intron | 45.0% | |
| GGCAATGGTCAAGTTAATGG+TGG | + | chr6.2:542727-542746 | MS.gene053080:CDS | 45.0% | |
| GGTAGGTTCAAGGAAAGTAG+GGG | + | chr6.2:542673-542692 | MS.gene053080:CDS | 45.0% | |
| GTAGGTTCAAGGAAAGTAGG+GGG | + | chr6.2:542674-542693 | MS.gene053080:CDS | 45.0% | |
| GTTGGCGGTAATTTCTACCA+CGG | - | chr6.2:541490-541509 | None:intergenic | 45.0% | |
| TCAATGCTTGCAAGACTGAG+TGG | + | chr6.2:541419-541438 | MS.gene053080:CDS | 45.0% | |
| TCGGTTCATCGCTGATATAG+AGG | + | chr6.2:542330-542349 | MS.gene053080:CDS | 45.0% | |
| TGAAGCTAGAGGTAGGTTCA+AGG | + | chr6.2:542663-542682 | MS.gene053080:CDS | 45.0% | |
| TGTTTATCTTGCCATCACGG+GGG | + | chr6.2:539788-539807 | MS.gene053080:intron | 45.0% | |
| TTATACGCCTGAAGCTGTTC+GGG | - | chr6.2:541245-541264 | None:intergenic | 45.0% | |
| TTGTTGTGACAACTTCCCCA+AGG | + | chr6.2:541376-541395 | MS.gene053080:CDS | 45.0% | |
| TTTGATGCCTGTGCGAAATG+GGG | + | chr6.2:540698-540717 | MS.gene053080:intron | 45.0% | |
| ! | AAAGAGTATGCGAAGCAAGG+TGG | + | chr6.2:539050-539069 | MS.gene053080:CDS | 45.0% |
| ! | AGGAAAGAGTATGCGAAGCA+AGG | + | chr6.2:539047-539066 | MS.gene053080:CDS | 45.0% |
| ! | CTTTATTTGTGTGTGGTCGG+TGG | + | chr6.2:540194-540213 | MS.gene053080:intron | 45.0% |
| ! | GACTATGATGGTGAGGTTAG+AGG | + | chr6.2:542478-542497 | MS.gene053080:CDS | 45.0% |
| ! | GGGGCCTAAAGTGTTTAAGA+AGG | - | chr6.2:539369-539388 | None:intergenic | 45.0% |
| ! | GTTGGTGTTCGTGGAGTATT+TGG | + | chr6.2:541299-541318 | MS.gene053080:CDS | 45.0% |
| ! | TATGTTCCAGTTGGTGTTCG+TGG | + | chr6.2:541290-541309 | MS.gene053080:CDS | 45.0% |
| ! | TGGAACAGAGAAGAGTATGG+TGG | + | chr6.2:542421-542440 | MS.gene053080:CDS | 45.0% |
| !! | ATTACTGACTCGACTGGCTT+TGG | - | chr6.2:540066-540085 | None:intergenic | 45.0% |
| !! | GCTCAAATCTGGCCTTGAAT+AGG | - | chr6.2:542072-542091 | None:intergenic | 45.0% |
| AAAGTAGGGGGAGAAGAGAG+AGG | + | chr6.2:542686-542705 | MS.gene053080:CDS | 50.0% | |
| AAATAGAACAGGACCTGCGG+CGG | + | chr6.2:542125-542144 | MS.gene053080:CDS | 50.0% | |
| AATGGCCAGCATCCAAAGAG+TGG | + | chr6.2:542177-542196 | MS.gene053080:CDS | 50.0% | |
| AATGGTGGTCAGAGCAGACA+CGG | + | chr6.2:542742-542761 | MS.gene053080:CDS | 50.0% | |
| AATGTGGGAGTCGGATTTGG+AGG | + | chr6.2:542840-542859 | MS.gene053080:CDS | 50.0% | |
| AGCACAGGGCCTCAGATATT+TGG | - | chr6.2:540297-540316 | None:intergenic | 50.0% | |
| AGTCCTCCTCACCTTCTGAT+TGG | - | chr6.2:543068-543087 | None:intergenic | 50.0% | |
| ATGCTTGCAAGACTGAGTGG+TGG | + | chr6.2:541422-541441 | MS.gene053080:CDS | 50.0% | |
| CACAGGGCCTCAGATATTTG+GGG | - | chr6.2:540295-540314 | None:intergenic | 50.0% | |
| CACCAAAGAGTTTGAGAGGC+AGG | + | chr6.2:542974-542993 | MS.gene053080:CDS | 50.0% | |
| CATGGATGCCTTTAGCGGTT+TGG | + | chr6.2:543029-543048 | MS.gene053080:CDS | 50.0% | |
| CCAGTCTTCCAAACCGCTAA+AGG | - | chr6.2:543040-543059 | None:intergenic | 50.0% | |
| CCATGGACACGGATTTAGTG+CGG | - | chr6.2:543014-543033 | None:intergenic | 50.0% | |
| CCTACCCTTCAACTGTTTGC+AGG | + | chr6.2:541127-541146 | MS.gene053080:intron | 50.0% | |
| CCTGCAAACAGTTGAAGGGT+AGG | - | chr6.2:541130-541149 | None:intergenic | 50.0% | |
| CTTAGAGTGACTGATCGACG+AGG | - | chr6.2:540569-540588 | None:intergenic | 50.0% | |
| CTTTACACCCGAACAGCTTC+AGG | + | chr6.2:541235-541254 | MS.gene053080:CDS | 50.0% | |
| GACTGGATGTCCCAATCAGA+AGG | + | chr6.2:543054-543073 | MS.gene053080:CDS | 50.0% | |
| GATGTCCCAATCAGAAGGTG+AGG | + | chr6.2:543059-543078 | MS.gene053080:CDS | 50.0% | |
| GCACAGGGCCTCAGATATTT+GGG | - | chr6.2:540296-540315 | None:intergenic | 50.0% | |
| GCTCTGATGAAGCTAGAGGT+AGG | + | chr6.2:542656-542675 | MS.gene053080:CDS | 50.0% | |
| GCTTTCGTCAATGCGGTTTC+AGG | - | chr6.2:540039-540058 | None:intergenic | 50.0% | |
| GGAATCAGATCCTGCTGAAC+AGG | + | chr6.2:542297-542316 | MS.gene053080:CDS | 50.0% | |
| GGACTCAAGAGGTGGTGATA+AGG | + | chr6.2:543083-543102 | MS.gene053080:CDS | 50.0% | |
| GTCCTCCTCACCTTCTGATT+GGG | - | chr6.2:543067-543086 | None:intergenic | 50.0% | |
| GTGTCCATGGATGCCTTTAG+CGG | + | chr6.2:543024-543043 | MS.gene053080:CDS | 50.0% | |
| GTTCTTACAAACCCCCGTGA+TGG | - | chr6.2:539802-539821 | None:intergenic | 50.0% | |
| GTTTGGGCCCCAAATATCTG+AGG | + | chr6.2:540285-540304 | MS.gene053080:intron | 50.0% | |
| TCCCTGCCTCTCAAACTCTT+TGG | - | chr6.2:542979-542998 | None:intergenic | 50.0% | |
| TCCTGAGGATCCAACTGCAA+TGG | + | chr6.2:542159-542178 | MS.gene053080:CDS | 50.0% | |
| TGCAATGTGGGAGTCGGATT+TGG | + | chr6.2:542837-542856 | MS.gene053080:CDS | 50.0% | |
| TGCTTGCAAGACTGAGTGGT+GGG | + | chr6.2:541423-541442 | MS.gene053080:CDS | 50.0% | |
| TGGGATGAGATGTGTGTGGT+GGG | + | chr6.2:540214-540233 | MS.gene053080:intron | 50.0% | |
| TGTTCGGGTGTAAAGAGCTC+TGG | - | chr6.2:541230-541249 | None:intergenic | 50.0% | |
| TTACTGACGGCTTGTCTCCA+CGG | - | chr6.2:542255-542274 | None:intergenic | 50.0% | |
| ! | CCTTTAGCGGTTTGGAAGAC+TGG | + | chr6.2:543037-543056 | MS.gene053080:CDS | 50.0% |
| ! | GGTGTTCGTGGAGTATTTGG+AGG | + | chr6.2:541302-541321 | MS.gene053080:CDS | 50.0% |
| !! | CAAACCGCTAAAGGCATCCA+TGG | - | chr6.2:543031-543050 | None:intergenic | 50.0% |
| !! | GATGGCTCTGATGAAGCTAG+AGG | + | chr6.2:542652-542671 | MS.gene053080:CDS | 50.0% |
| !! | GCATGGATTACTGACTCGAC+TGG | - | chr6.2:540072-540091 | None:intergenic | 50.0% |
| !! | GCTAAAGGCATCCATGGACA+CGG | - | chr6.2:543025-543044 | None:intergenic | 50.0% |
| !! | TCTAGCTCTTCCTGTTCAGC+AGG | - | chr6.2:542310-542329 | None:intergenic | 50.0% |
| AGCAGCAGCAGCGATGATGA+GGG | + | chr6.2:542910-542929 | MS.gene053080:CDS | 55.0% | |
| AGTTTGAGAGGCAGGGAAGC+AGG | + | chr6.2:542982-543001 | MS.gene053080:CDS | 55.0% | |
| CCGCACTAAATCCGTGTCCA+TGG | + | chr6.2:543011-543030 | MS.gene053080:CDS | 55.0% | |
| CGGGGAATGTCAACGATGAG+AGG | + | chr6.2:539027-539046 | MS.gene053080:CDS | 55.0% | |
| CGTTGACATTCCCCGACACA+AGG | - | chr6.2:539022-539041 | None:intergenic | 55.0% | |
| CTATCGGCAGTCCGATGCTT+GGG | - | chr6.2:542529-542548 | None:intergenic | 55.0% | |
| GAACTTGCCCCATTTCGCAC+AGG | - | chr6.2:540708-540727 | None:intergenic | 55.0% | |
| GAAGGTGAGGAGGACTCAAG+AGG | + | chr6.2:543072-543091 | MS.gene053080:CDS | 55.0% | |
| GACGATGGTGAGTGGCATCA+TGG | + | chr6.2:542592-542611 | MS.gene053080:CDS | 55.0% | |
| GCCATTGCAGTTGGATCCTC+AGG | - | chr6.2:542163-542182 | None:intergenic | 55.0% | |
| GCGGATGGGAGTAAATCCTG+AGG | + | chr6.2:542144-542163 | MS.gene053080:CDS | 55.0% | |
| GGAAGCCACTCTTTGGATGC+TGG | - | chr6.2:542185-542204 | None:intergenic | 55.0% | |
| GGATGAGATGTGTGTGGTGG+GGG | + | chr6.2:540216-540235 | MS.gene053080:intron | 55.0% | |
| GGGATGAGATGTGTGTGGTG+GGG | + | chr6.2:540215-540234 | MS.gene053080:intron | 55.0% | |
| GTAGGCTGAGCTACAGCACA+GGG | - | chr6.2:540311-540330 | None:intergenic | 55.0% | |
| GTCCCAATCAGAAGGTGAGG+AGG | + | chr6.2:543062-543081 | MS.gene053080:CDS | 55.0% | |
| GTGGGATGAGATGTGTGTGG+TGG | + | chr6.2:540213-540232 | MS.gene053080:intron | 55.0% | |
| TCGGTGGGATGAGATGTGTG+TGG | + | chr6.2:540210-540229 | MS.gene053080:intron | 55.0% | |
| TGCTGTAGCTCAGCCTACAC+AGG | + | chr6.2:540313-540332 | MS.gene053080:intron | 55.0% | |
| TGGATGCTGGCCATTGCAGT+TGG | - | chr6.2:542172-542191 | None:intergenic | 55.0% | |
| TGTAGGCTGAGCTACAGCAC+AGG | - | chr6.2:540312-540331 | None:intergenic | 55.0% | |
| ! | AGATGTGTGTGGTGGGGGAA+GGG | + | chr6.2:540221-540240 | MS.gene053080:intron | 55.0% |
| !! | AAGAGCTCTGGATCATGCCG+TGG | - | chr6.2:541218-541237 | None:intergenic | 55.0% |
| ACGACGACGACGATGGTGAG+TGG | + | chr6.2:542584-542603 | MS.gene053080:CDS | 60.0% | |
| AGCTCAGCCTACACAGGCAC+AGG | + | chr6.2:540319-540338 | MS.gene053080:intron | 60.0% | |
| GAGCAGCAGCAGCGATGATG+AGG | + | chr6.2:542909-542928 | MS.gene053080:CDS | 60.0% | |
| GATTTACTCCCATCCGCCGC+AGG | - | chr6.2:542141-542160 | None:intergenic | 60.0% | |
| GCTATCGGCAGTCCGATGCT+TGG | - | chr6.2:542530-542549 | None:intergenic | 60.0% | |
| GCTCAGCCTACACAGGCACA+GGG | + | chr6.2:540320-540339 | MS.gene053080:intron | 60.0% | |
| GGTGAGGAGGACTCAAGAGG+TGG | + | chr6.2:543075-543094 | MS.gene053080:CDS | 60.0% | |
| TCTGGATCATGCCGTGGTGG+AGG | - | chr6.2:541212-541231 | None:intergenic | 60.0% | |
| ! | ATTGAGAAGCACGGTGGGGC+CGG | - | chr6.2:540346-540365 | None:intergenic | 60.0% |
| ! | GAGATGTGTGTGGTGGGGGA+AGG | + | chr6.2:540220-540239 | MS.gene053080:intron | 60.0% |
| !! | AGCTCTGGATCATGCCGTGG+TGG | - | chr6.2:541215-541234 | None:intergenic | 60.0% |
| AGAACAGGACCTGCGGCGGA+TGG | + | chr6.2:542129-542148 | MS.gene053080:CDS | 65.0% | |
| AGCCTACACAGGCACAGGGC+CGG | + | chr6.2:540324-540343 | MS.gene053080:intron | 65.0% | |
| GAACAGGACCTGCGGCGGAT+GGG | + | chr6.2:542130-542149 | MS.gene053080:CDS | 65.0% | |
| TACCGGAGCTGCCTCCACCA+CGG | + | chr6.2:541198-541217 | MS.gene053080:CDS | 65.0% | |
| ! | TGCCGTGGTGGAGGCAGCTC+CGG | - | chr6.2:541203-541222 | None:intergenic | 70.0% |
| GGCCGGCCCTGTGCCTGTGT+AGG | - | chr6.2:540329-540348 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 538578 | 543200 | 538578 | ID=MS.gene053080 |
| chr6.2 | mRNA | 538578 | 543200 | 538578 | ID=MS.gene053080.t1;Parent=MS.gene053080 |
| chr6.2 | exon | 538578 | 538660 | 538578 | ID=MS.gene053080.t1.exon1;Parent=MS.gene053080.t1 |
| chr6.2 | CDS | 538578 | 538660 | 538578 | ID=cds.MS.gene053080.t1;Parent=MS.gene053080.t1 |
| chr6.2 | exon | 538903 | 539185 | 538903 | ID=MS.gene053080.t1.exon2;Parent=MS.gene053080.t1 |
| chr6.2 | CDS | 538903 | 539185 | 538903 | ID=cds.MS.gene053080.t1;Parent=MS.gene053080.t1 |
| chr6.2 | exon | 541149 | 541550 | 541149 | ID=MS.gene053080.t1.exon3;Parent=MS.gene053080.t1 |
| chr6.2 | CDS | 541149 | 541550 | 541149 | ID=cds.MS.gene053080.t1;Parent=MS.gene053080.t1 |
| chr6.2 | exon | 542067 | 543200 | 542067 | ID=MS.gene053080.t1.exon4;Parent=MS.gene053080.t1 |
| chr6.2 | CDS | 542067 | 543200 | 542067 | ID=cds.MS.gene053080.t1;Parent=MS.gene053080.t1 |
| Gene Sequence |
| Protein sequence |
