Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30146.t1 | XP_003600052.1 | 96.5 | 425 | 15 | 0 | 5 | 429 | 71 | 495 | 2.50E-214 | 754.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30146.t1 | Q8RWQ5 | 64.5 | 425 | 146 | 2 | 5 | 429 | 71 | 490 | 1.3e-139 | 497.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30146.t1 | G7IXK2 | 96.5 | 425 | 15 | 0 | 5 | 429 | 71 | 495 | 1.8e-214 | 754.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051975 | MS.gene30146 | 0.811665 | 6.25E-51 | -1.69E-46 |
| MS.gene055513 | MS.gene30146 | 0.800952 | 1.13E-48 | -1.69E-46 |
| MS.gene056986 | MS.gene30146 | 0.806847 | 6.74E-50 | -1.69E-46 |
| MS.gene059146 | MS.gene30146 | 0.801934 | 7.12E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene30146 | MS.gene016058 | PPI |
| MS.gene016060 | MS.gene30146 | PPI |
| MS.gene33133 | MS.gene30146 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30146.t1 | MTR_3g051190 | 98.588 | 425 | 6 | 0 | 5 | 429 | 71 | 495 | 0.0 | 846 |
| MS.gene30146.t1 | MTR_3g008470 | 29.496 | 417 | 236 | 3 | 5 | 421 | 156 | 514 | 1.23e-46 | 169 |
| MS.gene30146.t1 | MTR_2g031790 | 36.190 | 210 | 134 | 0 | 213 | 422 | 117 | 326 | 2.05e-38 | 142 |
| MS.gene30146.t1 | MTR_2g031810 | 35.238 | 210 | 136 | 0 | 213 | 422 | 140 | 349 | 5.24e-36 | 136 |
| MS.gene30146.t1 | MTR_1g014250 | 26.133 | 375 | 209 | 6 | 52 | 422 | 29 | 339 | 4.32e-30 | 120 |
| MS.gene30146.t1 | MTR_1g014250 | 33.333 | 198 | 127 | 2 | 229 | 422 | 266 | 462 | 7.77e-28 | 115 |
| MS.gene30146.t1 | MTR_1g103530 | 27.187 | 320 | 175 | 6 | 7 | 326 | 4 | 265 | 4.98e-19 | 89.4 |
| MS.gene30146.t1 | MTR_1g103530 | 26.724 | 348 | 191 | 7 | 6 | 353 | 168 | 451 | 7.89e-19 | 89.4 |
| MS.gene30146.t1 | MTR_2g031770 | 29.371 | 143 | 92 | 2 | 5 | 139 | 78 | 219 | 8.25e-16 | 77.0 |
| MS.gene30146.t1 | MTR_1g103540 | 44.318 | 88 | 41 | 2 | 328 | 410 | 1 | 85 | 4.57e-14 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30146.t1 | AT5G54860 | 64.000 | 425 | 148 | 2 | 5 | 429 | 71 | 490 | 0.0 | 546 |
| MS.gene30146.t1 | AT2G33280 | 29.314 | 423 | 239 | 6 | 5 | 426 | 31 | 394 | 3.87e-39 | 146 |
| MS.gene30146.t1 | AT2G33280 | 29.314 | 423 | 239 | 6 | 5 | 426 | 139 | 502 | 1.07e-38 | 147 |
| MS.gene30146.t1 | AT2G32040 | 29.630 | 405 | 226 | 7 | 6 | 410 | 51 | 396 | 4.01e-37 | 140 |
| MS.gene30146.t1 | AT2G32040 | 29.383 | 405 | 227 | 7 | 6 | 410 | 182 | 527 | 3.03e-36 | 140 |
| MS.gene30146.t1 | AT1G04570 | 33.962 | 212 | 140 | 0 | 210 | 421 | 137 | 348 | 1.18e-34 | 133 |
| MS.gene30146.t1 | AT1G64890 | 34.906 | 212 | 138 | 0 | 213 | 424 | 221 | 432 | 6.09e-34 | 132 |
| MS.gene30146.t1 | AT1G04570 | 33.962 | 212 | 140 | 0 | 210 | 421 | 285 | 496 | 2.17e-33 | 132 |
| MS.gene30146.t1 | AT2G33280 | 29.551 | 379 | 207 | 6 | 49 | 426 | 1 | 320 | 4.72e-33 | 128 |
| MS.gene30146.t1 | AT1G79710 | 25.412 | 425 | 241 | 9 | 5 | 422 | 106 | 461 | 3.34e-32 | 128 |
| MS.gene30146.t1 | AT1G79710 | 25.412 | 425 | 241 | 9 | 5 | 422 | 106 | 461 | 3.34e-32 | 128 |
| MS.gene30146.t1 | AT5G10820 | 25.829 | 422 | 244 | 8 | 5 | 421 | 114 | 471 | 5.16e-32 | 127 |
| MS.gene30146.t1 | AT5G25050 | 29.612 | 206 | 142 | 1 | 220 | 422 | 252 | 457 | 3.66e-26 | 110 |
| MS.gene30146.t1 | AT5G25040 | 27.442 | 215 | 153 | 1 | 211 | 422 | 94 | 308 | 4.89e-26 | 108 |
| MS.gene30146.t1 | AT5G25040 | 27.442 | 215 | 153 | 1 | 211 | 422 | 241 | 455 | 3.62e-25 | 107 |
| MS.gene30146.t1 | AT5G25040 | 32.278 | 158 | 107 | 0 | 265 | 422 | 323 | 480 | 3.96e-24 | 105 |
| MS.gene30146.t1 | AT5G25040 | 26.230 | 183 | 132 | 1 | 211 | 390 | 241 | 423 | 5.21e-17 | 83.2 |
| MS.gene30146.t1 | AT1G79710 | 21.547 | 362 | 208 | 9 | 5 | 359 | 106 | 398 | 4.46e-15 | 77.0 |
Find 96 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGATTGTATCCCGATTAA+AGG | 0.188248 | 3.3:+42586318 | MS.gene30146:CDS |
| TTGGAGGTCTCCTGCAAATT+TGG | 0.211585 | 3.3:-42587129 | None:intergenic |
| GATGCACCTGTTGCTTCTTT+TGG | 0.267349 | 3.3:-42589778 | None:intergenic |
| ATCCGTTTACTTCCTTTAAT+CGG | 0.280491 | 3.3:-42586330 | None:intergenic |
| CTCCAGAATCTTCGATTTGC+TGG | 0.283430 | 3.3:-42587471 | None:intergenic |
| ATGCCTTTCCTAATCTTATC+TGG | 0.289468 | 3.3:+42589550 | MS.gene30146:CDS |
| TTTGGCTCGGCACTTGTTGA+TGG | 0.295783 | 3.3:+42588596 | MS.gene30146:CDS |
| TTCTAAGCGTCATATGCTTT+AGG | 0.310369 | 3.3:-42588382 | None:intergenic |
| TTGGTCAGGGCCAAATTTGC+AGG | 0.328122 | 3.3:+42587119 | MS.gene30146:intron |
| GGAATATGCGGGAGTTTGTT+AGG | 0.329268 | 3.3:+42587182 | MS.gene30146:CDS |
| AATAAAGTTCCTTCAATTCC+TGG | 0.338588 | 3.3:-42589586 | None:intergenic |
| ATCATAAATTGCTTTCTTCA+AGG | 0.340461 | 3.3:-42587528 | None:intergenic |
| TACCAGCAAATCGAAGATTC+TGG | 0.353963 | 3.3:+42587469 | MS.gene30146:CDS |
| TCGCCTTTGGTGTACCAGAT+AGG | 0.358572 | 3.3:+42588561 | MS.gene30146:CDS |
| GATAGGGTTATGGTGCTCTT+TGG | 0.362387 | 3.3:+42588578 | MS.gene30146:CDS |
| GAATAAGACTGTTGAAAGAT+TGG | 0.368387 | 3.3:-42588255 | None:intergenic |
| AAAGCTCGAAGCATCATTCT+TGG | 0.370525 | 3.3:+42588298 | MS.gene30146:CDS |
| TCTATATTGAACATAGATTC+AGG | 0.374425 | 3.3:+42589676 | MS.gene30146:CDS |
| ATTGGTTACCTCAAAATCAT+TGG | 0.394424 | 3.3:-42587572 | None:intergenic |
| TCCGTTTACTTCCTTTAATC+GGG | 0.395107 | 3.3:-42586329 | None:intergenic |
| AAGTAAACGGATTTCGTACT+TGG | 0.400717 | 3.3:+42586341 | MS.gene30146:CDS |
| AAGAGCACCATAACCCTATC+TGG | 0.416214 | 3.3:-42588575 | None:intergenic |
| ATCTTGGTCTTCAATGGCTG+TGG | 0.416452 | 3.3:+42587157 | MS.gene30146:CDS |
| TAGTTTGGTTAATGATGAAC+AGG | 0.416959 | 3.3:+42586289 | None:intergenic |
| GAATATGCGGGAGTTTGTTA+GGG | 0.418448 | 3.3:+42587183 | MS.gene30146:CDS |
| AAGCTCGAAGCATCATTCTT+GGG | 0.419923 | 3.3:+42588299 | MS.gene30146:CDS |
| GTACGCGTTGTTGGTTGGTT+AGG | 0.423916 | 3.3:+42588326 | MS.gene30146:CDS |
| TTGGGGACGGTACGCGTTGT+TGG | 0.428599 | 3.3:+42588317 | MS.gene30146:CDS |
| TGGTGTACCAGATAGGGTTA+TGG | 0.430972 | 3.3:+42588568 | MS.gene30146:CDS |
| GCAAAGGATTTGCATACAAA+TGG | 0.433365 | 3.3:+42587341 | MS.gene30146:CDS |
| ATCAGAAACAGAAAAGCAAT+TGG | 0.433826 | 3.3:-42589754 | None:intergenic |
| GAGACCTCCAATCGTTATCT+TGG | 0.445839 | 3.3:+42587141 | MS.gene30146:CDS |
| ATCGTTATCTTGGTCTTCAA+TGG | 0.449351 | 3.3:+42587151 | MS.gene30146:CDS |
| AATAAGACTGTTGAAAGATT+GGG | 0.450409 | 3.3:-42588254 | None:intergenic |
| CTGTGCTCTCCCTTGTACCA+TGG | 0.460291 | 3.3:+42586373 | MS.gene30146:CDS |
| CTATGCCCTCCAGGAATTGA+AGG | 0.462869 | 3.3:+42589577 | MS.gene30146:CDS |
| CGCCTTTGGTGTACCAGATA+GGG | 0.464246 | 3.3:+42588562 | MS.gene30146:CDS |
| TTTCATGTCAATAAACAACT+TGG | 0.464904 | 3.3:+42589615 | MS.gene30146:CDS |
| ATAGTTGTCCAGATAAGATT+AGG | 0.465222 | 3.3:-42589558 | None:intergenic |
| TGGAGGACAGACCTATGTCT+TGG | 0.476709 | 3.3:+42588207 | MS.gene30146:intron |
| TTCTTGACTGTGCAAAACTT+AGG | 0.479731 | 3.3:+42586450 | MS.gene30146:CDS |
| AAATTGCTTTCTTCAAGGAA+TGG | 0.479777 | 3.3:-42587523 | None:intergenic |
| TCCCGATTAAAGGAAGTAAA+CGG | 0.487254 | 3.3:+42586328 | MS.gene30146:CDS |
| TCTGGAGAAAGGAGATTCCT+TGG | 0.489789 | 3.3:+42587487 | MS.gene30146:CDS |
| CTAAAATAAACCATGGTACA+AGG | 0.490097 | 3.3:-42586383 | None:intergenic |
| CTGATACCAAAAGAAGCAAC+AGG | 0.498367 | 3.3:+42589772 | MS.gene30146:CDS |
| GGTTATGGTGCTCTTTGGCT+CGG | 0.505871 | 3.3:+42588583 | MS.gene30146:CDS |
| TCTTGGTCTTCAATGGCTGT+GGG | 0.509990 | 3.3:+42587158 | MS.gene30146:CDS |
| CAGGTATGCTCATGTTGCGT+TGG | 0.512392 | 3.3:+42588493 | MS.gene30146:intron |
| TCTGGACAACTATGCCCTCC+AGG | 0.515434 | 3.3:+42589568 | MS.gene30146:CDS |
| AACAACTTGGGAACAACGAT+AGG | 0.523273 | 3.3:+42589628 | MS.gene30146:CDS |
| TGCAGATTGCCGTTGTGTCT+AGG | 0.528098 | 3.3:+42588531 | MS.gene30146:CDS |
| GGACGGTACGCGTTGTTGGT+TGG | 0.528967 | 3.3:+42588321 | MS.gene30146:CDS |
| TTCATGTCAATAAACAACTT+GGG | 0.529203 | 3.3:+42589616 | MS.gene30146:CDS |
| AAATCGAAGATTCTGGAGAA+AGG | 0.536470 | 3.3:+42587476 | MS.gene30146:CDS |
| TTGAAGACCAAGATAACGAT+TGG | 0.540367 | 3.3:-42587148 | None:intergenic |
| AGTTGAGGATTATATTGCAA+AGG | 0.550493 | 3.3:+42587325 | MS.gene30146:CDS |
| ATGGAACCACTTTGTTGCCA+AGG | 0.553047 | 3.3:-42587504 | None:intergenic |
| CTTGTCATATCTTACAGCCT+CGG | 0.554473 | 3.3:-42586511 | None:intergenic |
| GCGTCATATGCTTTAGGTGA+CGG | 0.557890 | 3.3:-42588376 | None:intergenic |
| AGTCTTATTCTACTACGAAA+CGG | 0.561877 | 3.3:+42588268 | MS.gene30146:CDS |
| GCACAGTCAAGAATACCATC+AGG | 0.566177 | 3.3:-42586440 | None:intergenic |
| AGTAGTACGCTGGATGAAGA+TGG | 0.570136 | 3.3:+42587368 | MS.gene30146:CDS |
| CATGACAATAACTGTATGCA+AGG | 0.574447 | 3.3:-42587263 | None:intergenic |
| AATATGCGGGAGTTTGTTAG+GGG | 0.585466 | 3.3:+42587184 | MS.gene30146:CDS |
| AAAGATTGGGAACAGTAATG+TGG | 0.587892 | 3.3:-42588241 | None:intergenic |
| GGTTGGTTAGGACTTATGCT+CGG | 0.594212 | 3.3:+42588338 | MS.gene30146:CDS |
| TGGGAACAGTAATGTGGGCA+AGG | 0.597103 | 3.3:-42588235 | None:intergenic |
| ACAACTTGGGAACAACGATA+GGG | 0.598636 | 3.3:+42589629 | MS.gene30146:CDS |
| AAGACCAAGATAACGATTGG+AGG | 0.600085 | 3.3:-42587145 | None:intergenic |
| GAATTCAACATGGCACCTGA+TGG | 0.602006 | 3.3:+42586425 | MS.gene30146:CDS |
| AGCTCGAAGCATCATTCTTG+GGG | 0.605840 | 3.3:+42588300 | MS.gene30146:CDS |
| ATCAACAACAACATCTGCCA+TGG | 0.606162 | 3.3:-42586478 | None:intergenic |
| CGAAGCATCATTCTTGGGGA+CGG | 0.607115 | 3.3:+42588304 | MS.gene30146:CDS |
| ATGGCTGTGGGAGGAATATG+CGG | 0.607957 | 3.3:+42587170 | MS.gene30146:CDS |
| TGTCCAGATAAGATTAGGAA+AGG | 0.608005 | 3.3:-42589553 | None:intergenic |
| TAAAATAAACCATGGTACAA+GGG | 0.610741 | 3.3:-42586382 | None:intergenic |
| AAGATTGGGAACAGTAATGT+GGG | 0.612894 | 3.3:-42588240 | None:intergenic |
| CAACCTTGAGGAATTCAACA+TGG | 0.615312 | 3.3:+42586415 | MS.gene30146:CDS |
| TGGTCTTCAATGGCTGTGGG+AGG | 0.618541 | 3.3:+42587161 | MS.gene30146:CDS |
| GTGCCATGTTGAATTCCTCA+AGG | 0.618903 | 3.3:-42586418 | None:intergenic |
| AAATGGTAGTAGTAGTACGC+TGG | 0.623642 | 3.3:+42587358 | MS.gene30146:CDS |
| CTTAAACCTAAAATAAACCA+TGG | 0.629672 | 3.3:-42586390 | None:intergenic |
| TAGGTGACGGTTATAAACGA+AGG | 0.632468 | 3.3:-42588363 | None:intergenic |
| GAGATTCCTTGGCAACAAAG+TGG | 0.632737 | 3.3:+42587498 | MS.gene30146:CDS |
| AACCCTATCTGGTACACCAA+AGG | 0.632946 | 3.3:-42588564 | None:intergenic |
| TAGGTTTAAGTTCAACCTTG+AGG | 0.633543 | 3.3:+42586403 | MS.gene30146:CDS |
| AAGTTCCTTCAATTCCTGGA+GGG | 0.637778 | 3.3:-42589582 | None:intergenic |
| TGGCTGTGGGAGGAATATGC+GGG | 0.640200 | 3.3:+42587171 | MS.gene30146:CDS |
| TAAAACTTCGCTATTTACAG+AGG | 0.655075 | 3.3:-42587303 | None:intergenic |
| AATCTGCAGAAGATTCAAGA+AGG | 0.662867 | 3.3:-42588516 | None:intergenic |
| GCAAAACTTAGGATCAGCCA+TGG | 0.664884 | 3.3:+42586461 | MS.gene30146:CDS |
| AAAGTTCCTTCAATTCCTGG+AGG | 0.671510 | 3.3:-42589583 | None:intergenic |
| CTTATTCTACTACGAAACGG+AGG | 0.704156 | 3.3:+42588271 | MS.gene30146:CDS |
| TGTTGATGCGATGATAGCCG+AGG | 0.715574 | 3.3:+42586494 | MS.gene30146:CDS |
| ATATGCGGGAGTTTGTTAGG+GGG | 0.728603 | 3.3:+42587185 | MS.gene30146:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAATATAATTATATATGAA+TGG | - | chr3.3:42587687-42587706 | None:intergenic | 10.0% |
| !!! | AAACTATAATGTTTTATATA+GGG | + | chr3.3:42589057-42589076 | MS.gene30146:intron | 10.0% |
| !!! | TTTTTGTAAGTTAAAATAAT+TGG | - | chr3.3:42587936-42587955 | None:intergenic | 10.0% |
| !! | AAAAAAAAATACTATCTTTC+AGG | - | chr3.3:42588852-42588871 | None:intergenic | 15.0% |
| !! | AAAAAAAATACTATCTTTCA+GGG | - | chr3.3:42588851-42588870 | None:intergenic | 15.0% |
| !! | ACTAATAAAAAGTAATGTTT+CGG | + | chr3.3:42588026-42588045 | MS.gene30146:intron | 15.0% |
| !!! | AAAGTAGATATTTGAAATTT+TGG | + | chr3.3:42587599-42587618 | MS.gene30146:intron | 15.0% |
| !!! | AGTATTTTTTTTTTTGCTTA+TGG | + | chr3.3:42588859-42588878 | MS.gene30146:intron | 15.0% |
| !!! | CAAACTATAATGTTTTATAT+AGG | + | chr3.3:42589056-42589075 | MS.gene30146:intron | 15.0% |
| !! | AATACTTAATCATAGAGAAT+AGG | - | chr3.3:42587092-42587111 | None:intergenic | 20.0% |
| !! | AGAAATATATCCATCATAAA+AGG | - | chr3.3:42586748-42586767 | None:intergenic | 20.0% |
| !! | CAAATATCTACTTTAATGAT+TGG | - | chr3.3:42587593-42587612 | None:intergenic | 20.0% |
| !! | TTGATCTATCAACTAAAATA+AGG | - | chr3.3:42586713-42586732 | None:intergenic | 20.0% |
| !!! | AAAAGATGATATCTTCATTT+TGG | + | chr3.3:42588752-42588771 | MS.gene30146:intron | 20.0% |
| !!! | ATGGAGATTATCTTTTTAAT+TGG | - | chr3.3:42587896-42587915 | None:intergenic | 20.0% |
| !!! | CTGTTTACTTTTTAAGATTA+TGG | + | chr3.3:42587622-42587641 | MS.gene30146:intron | 20.0% |
| !!! | TATGTTCTTCTTTTTATTAC+AGG | + | chr3.3:42588474-42588493 | MS.gene30146:intron | 20.0% |
| ! | AAAATTGTGATCACATAAGT+TGG | + | chr3.3:42587954-42587973 | MS.gene30146:intron | 25.0% |
| ! | AAGGATGTAACACAAAAAAA+TGG | - | chr3.3:42589254-42589273 | None:intergenic | 25.0% |
| ! | AATAAGACTGTTGAAAGATT+GGG | - | chr3.3:42588257-42588276 | None:intergenic | 25.0% |
| ! | AATAATTGGCCATAATGTAA+AGG | - | chr3.3:42587922-42587941 | None:intergenic | 25.0% |
| ! | AGTACAAGAAAAAGAAAGAA+GGG | + | chr3.3:42587416-42587435 | MS.gene30146:CDS | 25.0% |
| ! | ATCATAAATTGCTTTCTTCA+AGG | - | chr3.3:42587531-42587550 | None:intergenic | 25.0% |
| ! | CTTAAACCTAAAATAAACCA+TGG | - | chr3.3:42586393-42586412 | None:intergenic | 25.0% |
| ! | GCTTATAGATTATACGAAAA+CGG | + | chr3.3:42586991-42587010 | MS.gene30146:intron | 25.0% |
| ! | TAAAATAAACCATGGTACAA+GGG | - | chr3.3:42586385-42586404 | None:intergenic | 25.0% |
| ! | TAAAGGGACTAATTCAATAT+GGG | - | chr3.3:42588923-42588942 | None:intergenic | 25.0% |
| ! | TAGTACAAGAAAAAGAAAGA+AGG | + | chr3.3:42587415-42587434 | MS.gene30146:CDS | 25.0% |
| ! | TCAAATACATTATCTACCAA+GGG | + | chr3.3:42587999-42588018 | MS.gene30146:intron | 25.0% |
| ! | TCAATATGCACAATGAAATT+AGG | - | chr3.3:42586556-42586575 | None:intergenic | 25.0% |
| ! | TCTATATTGAACATAGATTC+AGG | + | chr3.3:42589676-42589695 | MS.gene30146:CDS | 25.0% |
| ! | TGAAGCATAATGATTTGATA+TGG | + | chr3.3:42589227-42589246 | MS.gene30146:intron | 25.0% |
| ! | TGATTAAGTATTTGCTTTGT+TGG | + | chr3.3:42587100-42587119 | MS.gene30146:intron | 25.0% |
| ! | TTAAAGGGACTAATTCAATA+TGG | - | chr3.3:42588924-42588943 | None:intergenic | 25.0% |
| ! | TTCAAATACATTATCTACCA+AGG | + | chr3.3:42587998-42588017 | MS.gene30146:intron | 25.0% |
| ! | TTCATGTCAATAAACAACTT+GGG | + | chr3.3:42589616-42589635 | MS.gene30146:CDS | 25.0% |
| ! | TTTCATGTCAATAAACAACT+TGG | + | chr3.3:42589615-42589634 | MS.gene30146:CDS | 25.0% |
| !! | ACCGAAAAAGTGTATATTAA+AGG | + | chr3.3:42589086-42589105 | MS.gene30146:intron | 25.0% |
| !! | CCGAAAAAGTGTATATTAAA+GGG | + | chr3.3:42589087-42589106 | MS.gene30146:intron | 25.0% |
| !!! | ATTTTTTTGTGTTACATCCT+TGG | + | chr3.3:42589253-42589272 | MS.gene30146:intron | 25.0% |
| !!! | CCCTTTAATATACACTTTTT+CGG | - | chr3.3:42589090-42589109 | None:intergenic | 25.0% |
| !!! | CTTTTTAATTGGCTGAAAAT+TGG | - | chr3.3:42587885-42587904 | None:intergenic | 25.0% |
| !!! | TCCAATGTTTGTGTTTTTAT+CGG | + | chr3.3:42587811-42587830 | MS.gene30146:intron | 25.0% |
| AAATTGCTTTCTTCAAGGAA+TGG | - | chr3.3:42587526-42587545 | None:intergenic | 30.0% | |
| AATAAAGTTCCTTCAATTCC+TGG | - | chr3.3:42589589-42589608 | None:intergenic | 30.0% | |
| AATTCTCATGTAAGCAACTA+AGG | + | chr3.3:42588406-42588425 | MS.gene30146:intron | 30.0% | |
| ACAAACCTTTAATGTCTACA+TGG | - | chr3.3:42587859-42587878 | None:intergenic | 30.0% | |
| ACCGATAAAAACACAAACAT+TGG | - | chr3.3:42587815-42587834 | None:intergenic | 30.0% | |
| AGTTGAGGATTATATTGCAA+AGG | + | chr3.3:42587325-42587344 | MS.gene30146:CDS | 30.0% | |
| ATAGTTGTCCAGATAAGATT+AGG | - | chr3.3:42589561-42589580 | None:intergenic | 30.0% | |
| ATCAGAAACAGAAAAGCAAT+TGG | - | chr3.3:42589757-42589776 | None:intergenic | 30.0% | |
| ATCCGTTTACTTCCTTTAAT+CGG | - | chr3.3:42586333-42586352 | None:intergenic | 30.0% | |
| ATTGGTTACCTCAAAATCAT+TGG | - | chr3.3:42587575-42587594 | None:intergenic | 30.0% | |
| CTAAAATAAACCATGGTACA+AGG | - | chr3.3:42586386-42586405 | None:intergenic | 30.0% | |
| CTATCTTTCAGGGATTAAAA+AGG | - | chr3.3:42588841-42588860 | None:intergenic | 30.0% | |
| GAATAAGACTGTTGAAAGAT+TGG | - | chr3.3:42588258-42588277 | None:intergenic | 30.0% | |
| TAAAACTTCGCTATTTACAG+AGG | - | chr3.3:42587306-42587325 | None:intergenic | 30.0% | |
| TACAAGAACTAATTCAGCAT+AGG | + | chr3.3:42588996-42589015 | MS.gene30146:intron | 30.0% | |
| TCAAATTAGTCAATCCAAAC+AGG | - | chr3.3:42586870-42586889 | None:intergenic | 30.0% | |
| TCCAAAGACAAAAATCAGAA+GGG | - | chr3.3:42589514-42589533 | None:intergenic | 30.0% | |
| TTCCAAAGACAAAAATCAGA+AGG | - | chr3.3:42589515-42589534 | None:intergenic | 30.0% | |
| TTTGCAGAGTTATCTTTCTA+AGG | + | chr3.3:42586844-42586863 | MS.gene30146:intron | 30.0% | |
| ! | AATAGGTATTACTAGCTTAG+AGG | + | chr3.3:42589172-42589191 | MS.gene30146:intron | 30.0% |
| ! | AGAATCTCTGTTTTATGTTG+TGG | + | chr3.3:42588187-42588206 | MS.gene30146:intron | 30.0% |
| ! | ATAGGTATTACTAGCTTAGA+GGG | + | chr3.3:42589173-42589192 | MS.gene30146:intron | 30.0% |
| ! | ATTATTAGCTTCATTCTGTG+AGG | - | chr3.3:42588138-42588157 | None:intergenic | 30.0% |
| ! | CATTTGTCAACCTTTTATGA+TGG | + | chr3.3:42586735-42586754 | MS.gene30146:intron | 30.0% |
| ! | CTTTTTATTAGTTGAACCCT+TGG | - | chr3.3:42588018-42588037 | None:intergenic | 30.0% |
| ! | GATATTTTTCCTAGACACAA+CGG | - | chr3.3:42588543-42588562 | None:intergenic | 30.0% |
| ! | TCTTTTGACAATCTTCTGTT+AGG | + | chr3.3:42589700-42589719 | MS.gene30146:CDS | 30.0% |
| ! | TGTCTTTGGAAAAAAAATGC+AGG | + | chr3.3:42589524-42589543 | MS.gene30146:intron | 30.0% |
| !! | ACTGTGTGACTTTTTAGTAA+AGG | - | chr3.3:42587396-42587415 | None:intergenic | 30.0% |
| !! | AGTCTTATTCTACTACGAAA+CGG | + | chr3.3:42588268-42588287 | MS.gene30146:CDS | 30.0% |
| !! | CTAAGGATTGTTTTATTGGT+TGG | + | chr3.3:42588423-42588442 | MS.gene30146:intron | 30.0% |
| !! | CTTGTACCATGGTTTATTTT+AGG | + | chr3.3:42586384-42586403 | MS.gene30146:CDS | 30.0% |
| !! | GCAACTAAGGATTGTTTTAT+TGG | + | chr3.3:42588419-42588438 | MS.gene30146:intron | 30.0% |
| !!! | AAATAGCGAAGTTTTAGTTG+AGG | + | chr3.3:42587310-42587329 | MS.gene30146:CDS | 30.0% |
| !!! | AGCTGTTTTTGTAAGCTATT+CGG | - | chr3.3:42586974-42586993 | None:intergenic | 30.0% |
| !!! | TAGTTTGTTCCTCATTGTTT+TGG | - | chr3.3:42589043-42589062 | None:intergenic | 30.0% |
| !!! | TTTTTCAAGCACATCTCAAT+AGG | + | chr3.3:42589155-42589174 | MS.gene30146:intron | 30.0% |
| AAAGATTGGGAACAGTAATG+TGG | - | chr3.3:42588244-42588263 | None:intergenic | 35.0% | |
| AACAAACACACACTCTAATG+AGG | - | chr3.3:42588098-42588117 | None:intergenic | 35.0% | |
| AACATGAAAATCAGCACGAA+TGG | + | chr3.3:42588718-42588737 | MS.gene30146:intron | 35.0% | |
| AAGATTGGGAACAGTAATGT+GGG | - | chr3.3:42588243-42588262 | None:intergenic | 35.0% | |
| AATCTGCAGAAGATTCAAGA+AGG | - | chr3.3:42588519-42588538 | None:intergenic | 35.0% | |
| AATTGGCCATAATGTAAAGG+AGG | - | chr3.3:42587919-42587938 | None:intergenic | 35.0% | |
| AGCATAGGCCAAATATTACA+CGG | + | chr3.3:42589011-42589030 | MS.gene30146:intron | 35.0% | |
| AGTCACAAAATTAACCGATC+TGG | - | chr3.3:42586665-42586684 | None:intergenic | 35.0% | |
| ATCAATCCAAATAGACTCCA+AGG | - | chr3.3:42589273-42589292 | None:intergenic | 35.0% | |
| ATGCCTTTCCTAATCTTATC+TGG | + | chr3.3:42589550-42589569 | MS.gene30146:CDS | 35.0% | |
| ATTTACTTTATCACTGCACC+TGG | + | chr3.3:42589125-42589144 | MS.gene30146:intron | 35.0% | |
| CATGACAATAACTGTATGCA+AGG | - | chr3.3:42587266-42587285 | None:intergenic | 35.0% | |
| CCTTTAATGTCTACATGGTT+CGG | - | chr3.3:42587854-42587873 | None:intergenic | 35.0% | |
| CGCATACAATGCAAAGAAAT+TGG | - | chr3.3:42586782-42586801 | None:intergenic | 35.0% | |
| CTTCCAATCTCTCAATACAA+TGG | + | chr3.3:42586609-42586628 | MS.gene30146:intron | 35.0% | |
| GCAAAGGATTTGCATACAAA+TGG | + | chr3.3:42587341-42587360 | MS.gene30146:CDS | 35.0% | |
| GGTTTAGTCCGTGTAATATT+TGG | - | chr3.3:42589022-42589041 | None:intergenic | 35.0% | |
| TATGAAATGTGCTCTCAACA+AGG | - | chr3.3:42587654-42587673 | None:intergenic | 35.0% | |
| TCATAGAGAATAGGCATGTT+TGG | - | chr3.3:42587083-42587102 | None:intergenic | 35.0% | |
| TCCCGATTAAAGGAAGTAAA+CGG | + | chr3.3:42586328-42586347 | MS.gene30146:CDS | 35.0% | |
| TCCGTTTACTTCCTTTAATC+GGG | - | chr3.3:42586332-42586351 | None:intergenic | 35.0% | |
| TCTAGGAAAAATATCGCCTT+TGG | + | chr3.3:42588548-42588567 | MS.gene30146:CDS | 35.0% | |
| TCTGATTGTATCCCGATTAA+AGG | + | chr3.3:42586318-42586337 | MS.gene30146:CDS | 35.0% | |
| TGAATTATGCATGCACTTCA+TGG | + | chr3.3:42586817-42586836 | MS.gene30146:intron | 35.0% | |
| TGCTTGAAAAAGATGAATCC+AGG | - | chr3.3:42589146-42589165 | None:intergenic | 35.0% | |
| TGTCCAGATAAGATTAGGAA+AGG | - | chr3.3:42589556-42589575 | None:intergenic | 35.0% | |
| TTACATCCTTGGAGTCTATT+TGG | + | chr3.3:42589264-42589283 | MS.gene30146:intron | 35.0% | |
| TTCTAAGCGTCATATGCTTT+AGG | - | chr3.3:42588385-42588404 | None:intergenic | 35.0% | |
| TTCTTGACTGTGCAAAACTT+AGG | + | chr3.3:42586450-42586469 | MS.gene30146:CDS | 35.0% | |
| TTGAAGACCAAGATAACGAT+TGG | - | chr3.3:42587151-42587170 | None:intergenic | 35.0% | |
| TTGGAAGCTTATCTATATGC+AGG | - | chr3.3:42586596-42586615 | None:intergenic | 35.0% | |
| ! | AAATCGAAGATTCTGGAGAA+AGG | + | chr3.3:42587476-42587495 | MS.gene30146:CDS | 35.0% |
| ! | AAGTAAACGGATTTCGTACT+TGG | + | chr3.3:42586341-42586360 | MS.gene30146:CDS | 35.0% |
| ! | AAGTATTTGCTTTGTTGGTC+AGG | + | chr3.3:42587105-42587124 | MS.gene30146:intron | 35.0% |
| ! | AGTATTTGCTTTGTTGGTCA+GGG | + | chr3.3:42587106-42587125 | MS.gene30146:intron | 35.0% |
| ! | ATCGTTATCTTGGTCTTCAA+TGG | + | chr3.3:42587151-42587170 | MS.gene30146:CDS | 35.0% |
| ! | ATCTCTGTTTTATGTTGTGG+AGG | + | chr3.3:42588190-42588209 | MS.gene30146:intron | 35.0% |
| ! | ATTGTCATGCTTTTCTGTGA+AGG | + | chr3.3:42587277-42587296 | MS.gene30146:CDS | 35.0% |
| ! | TAACAGTTTTCATTCCTCAC+TGG | + | chr3.3:42588803-42588822 | MS.gene30146:intron | 35.0% |
| ! | TAGGTTTAAGTTCAACCTTG+AGG | + | chr3.3:42586403-42586422 | MS.gene30146:CDS | 35.0% |
| ! | TTAGACAGCCAATGATTTTG+AGG | + | chr3.3:42587564-42587583 | MS.gene30146:CDS | 35.0% |
| ! | TTTTTGCTTAAGCATGTGCA+TGG | + | chr3.3:42588672-42588691 | MS.gene30146:intron | 35.0% |
| !! | TTATCTTTCTAAGGCCTGTT+TGG | + | chr3.3:42586853-42586872 | MS.gene30146:intron | 35.0% |
| !!! | ATTCGTGCTGATTTTCATGT+TGG | - | chr3.3:42588719-42588738 | None:intergenic | 35.0% |
| !!! | GCTGTTTTTGTAAGCTATTC+GGG | - | chr3.3:42586973-42586992 | None:intergenic | 35.0% |
| AAAGTTCCTTCAATTCCTGG+AGG | - | chr3.3:42589586-42589605 | None:intergenic | 40.0% | |
| AAATGGTAGTAGTAGTACGC+TGG | + | chr3.3:42587358-42587377 | MS.gene30146:CDS | 40.0% | |
| AACAACTTGGGAACAACGAT+AGG | + | chr3.3:42589628-42589647 | MS.gene30146:CDS | 40.0% | |
| AAGACCAAGATAACGATTGG+AGG | - | chr3.3:42587148-42587167 | None:intergenic | 40.0% | |
| AAGTTCCTTCAATTCCTGGA+GGG | - | chr3.3:42589585-42589604 | None:intergenic | 40.0% | |
| ACAACTTGGGAACAACGATA+GGG | + | chr3.3:42589629-42589648 | MS.gene30146:CDS | 40.0% | |
| ATCAACAACAACATCTGCCA+TGG | - | chr3.3:42586481-42586500 | None:intergenic | 40.0% | |
| CAACCTTGAGGAATTCAACA+TGG | + | chr3.3:42586415-42586434 | MS.gene30146:CDS | 40.0% | |
| CATAAGCTCTTCACTCTTCA+GGG | + | chr3.3:42589393-42589412 | MS.gene30146:intron | 40.0% | |
| CCGAACCATGTAGACATTAA+AGG | + | chr3.3:42587851-42587870 | MS.gene30146:intron | 40.0% | |
| CGGACTAAACCAAAACAATG+AGG | + | chr3.3:42589031-42589050 | MS.gene30146:intron | 40.0% | |
| CTCCATCCTCCTTTACATTA+TGG | + | chr3.3:42587910-42587929 | MS.gene30146:intron | 40.0% | |
| CTGATACCAAAAGAAGCAAC+AGG | + | chr3.3:42589772-42589791 | MS.gene30146:CDS | 40.0% | |
| CTTATTCTACTACGAAACGG+AGG | + | chr3.3:42588271-42588290 | MS.gene30146:CDS | 40.0% | |
| CTTGTCATATCTTACAGCCT+CGG | - | chr3.3:42586514-42586533 | None:intergenic | 40.0% | |
| GCAAGGAAAAACCAAGACAT+AGG | - | chr3.3:42588221-42588240 | None:intergenic | 40.0% | |
| GGACAAAATTTAAGCCAGTG+AGG | - | chr3.3:42588820-42588839 | None:intergenic | 40.0% | |
| GGTCCATTGTATTGAGAGAT+TGG | - | chr3.3:42586615-42586634 | None:intergenic | 40.0% | |
| TACCAGCAAATCGAAGATTC+TGG | + | chr3.3:42587469-42587488 | MS.gene30146:CDS | 40.0% | |
| TCAATACAATGGACCAGTGA+AGG | + | chr3.3:42586620-42586639 | MS.gene30146:intron | 40.0% | |
| TCATAAGCTCTTCACTCTTC+AGG | + | chr3.3:42589392-42589411 | MS.gene30146:intron | 40.0% | |
| ! | AAAGCTCGAAGCATCATTCT+TGG | + | chr3.3:42588298-42588317 | MS.gene30146:CDS | 40.0% |
| ! | AAGCTCGAAGCATCATTCTT+GGG | + | chr3.3:42588299-42588318 | MS.gene30146:CDS | 40.0% |
| ! | ACAACGATAGGGTCTTTTGT+AGG | + | chr3.3:42589640-42589659 | MS.gene30146:CDS | 40.0% |
| ! | GCCCTTCTGATTTTTGTCTT+TGG | + | chr3.3:42589510-42589529 | MS.gene30146:intron | 40.0% |
| ! | TAGGTGACGGTTATAAACGA+AGG | - | chr3.3:42588366-42588385 | None:intergenic | 40.0% |
| !! | AATATGCGGGAGTTTGTTAG+GGG | + | chr3.3:42587184-42587203 | MS.gene30146:CDS | 40.0% |
| !! | GAATATGCGGGAGTTTGTTA+GGG | + | chr3.3:42587183-42587202 | MS.gene30146:CDS | 40.0% |
| !! | GGGAGTGTTTAATACCAGAT+CGG | + | chr3.3:42586648-42586667 | MS.gene30146:intron | 40.0% |
| AACCCTATCTGGTACACCAA+AGG | - | chr3.3:42588567-42588586 | None:intergenic | 45.0% | |
| AAGCTATTCGGGAGAGCTTA+TGG | - | chr3.3:42586962-42586981 | None:intergenic | 45.0% | |
| AGTAGTACGCTGGATGAAGA+TGG | + | chr3.3:42587368-42587387 | MS.gene30146:CDS | 45.0% | |
| ATGGAACCACTTTGTTGCCA+AGG | - | chr3.3:42587507-42587526 | None:intergenic | 45.0% | |
| ATGTCCGACATCAACACATC+TGG | + | chr3.3:42587737-42587756 | MS.gene30146:intron | 45.0% | |
| CACACACTCTAATGAGGAGT+AGG | - | chr3.3:42588092-42588111 | None:intergenic | 45.0% | |
| GAATTCAACATGGCACCTGA+TGG | + | chr3.3:42586425-42586444 | MS.gene30146:CDS | 45.0% | |
| GAGACCTCCAATCGTTATCT+TGG | + | chr3.3:42587141-42587160 | MS.gene30146:CDS | 45.0% | |
| GAGATTCCTTGGCAACAAAG+TGG | + | chr3.3:42587498-42587517 | MS.gene30146:CDS | 45.0% | |
| GATAGGGTTATGGTGCTCTT+TGG | + | chr3.3:42588578-42588597 | MS.gene30146:CDS | 45.0% | |
| GCAAAACTTAGGATCAGCCA+TGG | + | chr3.3:42586461-42586480 | MS.gene30146:CDS | 45.0% | |
| GCACAGTCAAGAATACCATC+AGG | - | chr3.3:42586443-42586462 | None:intergenic | 45.0% | |
| GGCCATAATGTAAAGGAGGA+TGG | - | chr3.3:42587915-42587934 | None:intergenic | 45.0% | |
| GTGCCATGTTGAATTCCTCA+AGG | - | chr3.3:42586421-42586440 | None:intergenic | 45.0% | |
| TCTGGAGAAAGGAGATTCCT+TGG | + | chr3.3:42587487-42587506 | MS.gene30146:CDS | 45.0% | |
| TGGTGTACCAGATAGGGTTA+TGG | + | chr3.3:42588568-42588587 | MS.gene30146:CDS | 45.0% | |
| TGTCCGACATCAACACATCT+GGG | + | chr3.3:42587738-42587757 | MS.gene30146:intron | 45.0% | |
| TTGGAGGTCTCCTGCAAATT+TGG | - | chr3.3:42587132-42587151 | None:intergenic | 45.0% | |
| ! | AGCTCGAAGCATCATTCTTG+GGG | + | chr3.3:42588300-42588319 | MS.gene30146:CDS | 45.0% |
| ! | ATAGGGTCTTTTGTAGGTGC+TGG | + | chr3.3:42589646-42589665 | MS.gene30146:CDS | 45.0% |
| ! | ATCTTGGTCTTCAATGGCTG+TGG | + | chr3.3:42587157-42587176 | MS.gene30146:CDS | 45.0% |
| ! | CTCCAGAATCTTCGATTTGC+TGG | - | chr3.3:42587474-42587493 | None:intergenic | 45.0% |
| ! | GAGAGCACACTTCAGATTGA+TGG | + | chr3.3:42587706-42587725 | MS.gene30146:intron | 45.0% |
| ! | GCGTCATATGCTTTAGGTGA+CGG | - | chr3.3:42588379-42588398 | None:intergenic | 45.0% |
| ! | GGAATATGCGGGAGTTTGTT+AGG | + | chr3.3:42587182-42587201 | MS.gene30146:CDS | 45.0% |
| ! | GGTTGGTTAGGACTTATGCT+CGG | + | chr3.3:42588338-42588357 | MS.gene30146:CDS | 45.0% |
| ! | GTACCCAGATGTGTTGATGT+CGG | - | chr3.3:42587744-42587763 | None:intergenic | 45.0% |
| ! | TCTTGGTCTTCAATGGCTGT+GGG | + | chr3.3:42587158-42587177 | MS.gene30146:CDS | 45.0% |
| !! | AAGAGCACCATAACCCTATC+TGG | - | chr3.3:42588578-42588597 | None:intergenic | 45.0% |
| !! | ATATGCGGGAGTTTGTTAGG+GGG | + | chr3.3:42587185-42587204 | MS.gene30146:CDS | 45.0% |
| !! | GATGCACCTGTTGCTTCTTT+TGG | - | chr3.3:42589781-42589800 | None:intergenic | 45.0% |
| !!! | ATATATCAATTTTATTTTAA+AGG | - | chr3.3:42588940-42588959 | None:intergenic | 5.0% |
| !!! | TAAAATTGATATATATTTTA+TGG | + | chr3.3:42588946-42588965 | MS.gene30146:intron | 5.0% |
| !!! | TATATCAATTTTATTTTAAA+GGG | - | chr3.3:42588939-42588958 | None:intergenic | 5.0% |
| !!! | TTTGTTTATATTTTTATTTA+TGG | + | chr3.3:42588112-42588131 | MS.gene30146:intron | 5.0% |
| AAGCATGTGCATGGTACGAG+AGG | + | chr3.3:42588681-42588700 | MS.gene30146:intron | 50.0% | |
| AATGGACCAGTGAAGGTCGA+AGG | + | chr3.3:42586627-42586646 | MS.gene30146:intron | 50.0% | |
| ATGGACCAGTGAAGGTCGAA+GGG | + | chr3.3:42586628-42586647 | MS.gene30146:intron | 50.0% | |
| ATGGCTGTGGGAGGAATATG+CGG | + | chr3.3:42587170-42587189 | MS.gene30146:CDS | 50.0% | |
| CAGGTATGCTCATGTTGCGT+TGG | + | chr3.3:42588493-42588512 | MS.gene30146:intron | 50.0% | |
| CTATGCCCTCCAGGAATTGA+AGG | + | chr3.3:42589577-42589596 | MS.gene30146:CDS | 50.0% | |
| GGTTATGGTGCTCTTTGGCT+CGG | + | chr3.3:42588583-42588602 | MS.gene30146:CDS | 50.0% | |
| TGCAGATTGCCGTTGTGTCT+AGG | + | chr3.3:42588531-42588550 | MS.gene30146:CDS | 50.0% | |
| TGGAGGACAGACCTATGTCT+TGG | + | chr3.3:42588207-42588226 | MS.gene30146:intron | 50.0% | |
| TGGGAACAGTAATGTGGGCA+AGG | - | chr3.3:42588238-42588257 | None:intergenic | 50.0% | |
| TGTTGATGCGATGATAGCCG+AGG | + | chr3.3:42586494-42586513 | MS.gene30146:CDS | 50.0% | |
| TTGGTCAGGGCCAAATTTGC+AGG | + | chr3.3:42587119-42587138 | MS.gene30146:intron | 50.0% | |
| ! | CGAAGCATCATTCTTGGGGA+CGG | + | chr3.3:42588304-42588323 | MS.gene30146:CDS | 50.0% |
| ! | CGCCTTTGGTGTACCAGATA+GGG | + | chr3.3:42588562-42588581 | MS.gene30146:CDS | 50.0% |
| ! | GTACGCGTTGTTGGTTGGTT+AGG | + | chr3.3:42588326-42588345 | MS.gene30146:CDS | 50.0% |
| ! | TCGCCTTTGGTGTACCAGAT+AGG | + | chr3.3:42588561-42588580 | MS.gene30146:CDS | 50.0% |
| !! | TTTGGCTCGGCACTTGTTGA+TGG | + | chr3.3:42588596-42588615 | MS.gene30146:CDS | 50.0% |
| !!! | GTCTTTTGTAGGTGCTGGCT+TGG | + | chr3.3:42589651-42589670 | MS.gene30146:CDS | 50.0% |
| ACACTCCCTTCGACCTTCAC+TGG | - | chr3.3:42586636-42586655 | None:intergenic | 55.0% | |
| CTGTGCTCTCCCTTGTACCA+TGG | + | chr3.3:42586373-42586392 | MS.gene30146:CDS | 55.0% | |
| TCTGGACAACTATGCCCTCC+AGG | + | chr3.3:42589568-42589587 | MS.gene30146:CDS | 55.0% | |
| TGGCTGTGGGAGGAATATGC+GGG | + | chr3.3:42587171-42587190 | MS.gene30146:CDS | 55.0% | |
| TGGTCTTCAATGGCTGTGGG+AGG | + | chr3.3:42587161-42587180 | MS.gene30146:CDS | 55.0% | |
| GGACGGTACGCGTTGTTGGT+TGG | + | chr3.3:42588321-42588340 | MS.gene30146:CDS | 60.0% | |
| TTGGGGACGGTACGCGTTGT+TGG | + | chr3.3:42588317-42588336 | MS.gene30146:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 42586300 | 42589807 | 42586300 | ID=MS.gene30146 |
| chr3.3 | mRNA | 42586300 | 42589807 | 42586300 | ID=MS.gene30146.t1;Parent=MS.gene30146 |
| chr3.3 | exon | 42586300 | 42586532 | 42586300 | ID=MS.gene30146.t1.exon1;Parent=MS.gene30146.t1 |
| chr3.3 | CDS | 42586300 | 42586532 | 42586300 | ID=cds.MS.gene30146.t1;Parent=MS.gene30146.t1 |
| chr3.3 | exon | 42587127 | 42587585 | 42587127 | ID=MS.gene30146.t1.exon2;Parent=MS.gene30146.t1 |
| chr3.3 | CDS | 42587127 | 42587585 | 42587127 | ID=cds.MS.gene30146.t1;Parent=MS.gene30146.t1 |
| chr3.3 | exon | 42588217 | 42588414 | 42588217 | ID=MS.gene30146.t1.exon3;Parent=MS.gene30146.t1 |
| chr3.3 | CDS | 42588217 | 42588414 | 42588217 | ID=cds.MS.gene30146.t1;Parent=MS.gene30146.t1 |
| chr3.3 | exon | 42588496 | 42588633 | 42588496 | ID=MS.gene30146.t1.exon4;Parent=MS.gene30146.t1 |
| chr3.3 | CDS | 42588496 | 42588633 | 42588496 | ID=cds.MS.gene30146.t1;Parent=MS.gene30146.t1 |
| chr3.3 | exon | 42589546 | 42589807 | 42589546 | ID=MS.gene30146.t1.exon5;Parent=MS.gene30146.t1 |
| chr3.3 | CDS | 42589546 | 42589807 | 42589546 | ID=cds.MS.gene30146.t1;Parent=MS.gene30146.t1 |
| Gene Sequence |
| Protein sequence |
