Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30824.t1 | XP_013452551.1 | 86.7 | 437 | 8 | 1 | 1 | 387 | 1 | 437 | 3.40E-170 | 607.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30824.t1 | Q9FNZ2 | 64.8 | 423 | 105 | 4 | 1 | 380 | 3 | 424 | 1.8e-119 | 430.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30824.t1 | A0A072U9U5 | 86.7 | 437 | 8 | 1 | 1 | 387 | 1 | 437 | 2.5e-170 | 607.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene30824.t1 | TF | C3H |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene30824 | MS.gene79299 | PPI |
| MS.gene30824 | MS.gene061878 | PPI |
| MS.gene30824 | MS.gene97690 | PPI |
| MS.gene09870 | MS.gene30824 | PPI |
| MS.gene30824 | MS.gene016240 | PPI |
| MS.gene30824 | MS.gene27556 | PPI |
| MS.gene79299 | MS.gene30824 | PPI |
| MS.gene30824 | MS.gene86578 | PPI |
| MS.gene30824 | MS.gene27773 | PPI |
| MS.gene30824 | MS.gene62770 | PPI |
| MS.gene30824 | MS.gene24037 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30824.t1 | MTR_6g465150 | 87.443 | 438 | 5 | 1 | 1 | 388 | 1 | 438 | 0.0 | 772 |
| MS.gene30824.t1 | MTR_8g028700 | 52.866 | 314 | 144 | 3 | 71 | 380 | 202 | 515 | 1.56e-122 | 364 |
| MS.gene30824.t1 | MTR_8g032850 | 50.321 | 312 | 153 | 2 | 71 | 380 | 589 | 900 | 4.16e-114 | 353 |
| MS.gene30824.t1 | MTR_8g032850 | 44.878 | 205 | 104 | 4 | 72 | 269 | 240 | 442 | 5.69e-49 | 177 |
| MS.gene30824.t1 | MTR_2g101410 | 28.319 | 226 | 133 | 7 | 99 | 295 | 187 | 412 | 7.66e-16 | 79.0 |
| MS.gene30824.t1 | MTR_8g089650 | 26.316 | 228 | 117 | 6 | 79 | 288 | 232 | 426 | 6.80e-13 | 70.1 |
| MS.gene30824.t1 | MTR_1g021590 | 24.746 | 295 | 189 | 12 | 93 | 376 | 105 | 377 | 1.18e-12 | 69.3 |
| MS.gene30824.t1 | MTR_1g021590 | 28.205 | 234 | 140 | 8 | 99 | 307 | 218 | 448 | 1.82e-12 | 68.9 |
| MS.gene30824.t1 | MTR_3g110185 | 29.302 | 215 | 127 | 9 | 99 | 288 | 193 | 407 | 1.29e-12 | 69.7 |
| MS.gene30824.t1 | MTR_4g068457 | 28.125 | 224 | 129 | 9 | 99 | 292 | 237 | 458 | 9.61e-12 | 66.6 |
| MS.gene30824.t1 | MTR_4g105700 | 25.177 | 282 | 175 | 12 | 96 | 351 | 398 | 669 | 1.34e-11 | 66.6 |
| MS.gene30824.t1 | MTR_2g016690 | 25.514 | 243 | 150 | 10 | 97 | 316 | 90 | 324 | 1.80e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30824.t1 | AT4G25440 | 63.033 | 422 | 114 | 3 | 1 | 380 | 3 | 424 | 0.0 | 565 |
| MS.gene30824.t1 | AT4G25440 | 63.033 | 422 | 114 | 3 | 1 | 380 | 3 | 424 | 0.0 | 565 |
| MS.gene30824.t1 | AT4G25440 | 63.033 | 422 | 114 | 3 | 1 | 380 | 3 | 424 | 0.0 | 565 |
| MS.gene30824.t1 | AT5G51980 | 60.690 | 435 | 120 | 4 | 1 | 384 | 1 | 435 | 0.0 | 556 |
| MS.gene30824.t1 | AT5G51980 | 60.690 | 435 | 120 | 4 | 1 | 384 | 1 | 435 | 0.0 | 556 |
| MS.gene30824.t1 | AT5G40880 | 50.462 | 325 | 157 | 3 | 54 | 376 | 114 | 436 | 9.73e-115 | 342 |
| MS.gene30824.t1 | AT5G40880 | 50.462 | 325 | 157 | 3 | 54 | 376 | 143 | 465 | 1.67e-114 | 342 |
| MS.gene30824.t1 | AT5G49200 | 49.359 | 312 | 153 | 3 | 70 | 376 | 101 | 412 | 3.11e-108 | 324 |
| MS.gene30824.t1 | AT1G24530 | 27.731 | 238 | 126 | 7 | 61 | 288 | 200 | 401 | 3.58e-14 | 73.9 |
| MS.gene30824.t1 | AT3G50390 | 22.581 | 279 | 176 | 8 | 136 | 376 | 93 | 369 | 2.42e-13 | 71.6 |
| MS.gene30824.t1 | AT3G50390 | 27.602 | 221 | 131 | 8 | 99 | 293 | 210 | 427 | 5.36e-11 | 64.3 |
| MS.gene30824.t1 | AT1G24130 | 26.606 | 218 | 132 | 7 | 99 | 288 | 191 | 408 | 3.37e-13 | 70.9 |
| MS.gene30824.t1 | AT1G49040 | 26.820 | 261 | 172 | 7 | 89 | 341 | 888 | 1137 | 1.56e-11 | 66.6 |
| MS.gene30824.t1 | AT1G47610 | 27.103 | 214 | 131 | 6 | 99 | 288 | 134 | 346 | 1.80e-11 | 65.5 |
| MS.gene30824.t1 | AT3G18140 | 25.941 | 239 | 150 | 11 | 97 | 316 | 75 | 305 | 4.83e-11 | 63.5 |
| MS.gene30824.t1 | AT2G26060 | 24.855 | 346 | 197 | 17 | 93 | 381 | 13 | 352 | 5.11e-11 | 63.9 |
| MS.gene30824.t1 | AT4G32990 | 23.442 | 337 | 197 | 15 | 89 | 381 | 9 | 328 | 5.24e-11 | 63.9 |
| MS.gene30824.t1 | AT2G26490 | 29.464 | 224 | 122 | 10 | 99 | 293 | 205 | 421 | 5.51e-11 | 64.3 |
| MS.gene30824.t1 | AT4G15900 | 28.431 | 204 | 127 | 9 | 96 | 286 | 172 | 369 | 7.10e-11 | 63.9 |
Find 103 sgRNAs with CRISPR-Local
Find 275 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCTTACCTTAACAAAAT+TGG | 0.119333 | 6.4:-38158665 | None:intergenic |
| CCCACTTTAGTGCACGTTAT+TGG | 0.220045 | 6.4:-38161096 | None:intergenic |
| GAGCCAGCTGCATCACTTAA+AGG | 0.244802 | 6.4:+38159303 | MS.gene30824:CDS |
| TGGTGATGTCTGTTCTTTGC+TGG | 0.250109 | 6.4:+38159555 | MS.gene30824:CDS |
| AGTGAATTGCCTACTTCTAA+TGG | 0.301502 | 6.4:+38157066 | MS.gene30824:CDS |
| CTTGCAGGATGGAGCTATAT+TGG | 0.302277 | 6.4:+38159248 | MS.gene30824:intron |
| CTTCTTACCTTAACAAAATT+GGG | 0.313002 | 6.4:-38158664 | None:intergenic |
| TTATTGGATGTGGCCGGTTC+AGG | 0.316183 | 6.4:-38161080 | None:intergenic |
| CGGGCTTATGCTGATAATTC+GGG | 0.320112 | 6.4:+38157108 | MS.gene30824:CDS |
| ACGGGCTTATGCTGATAATT+CGG | 0.326315 | 6.4:+38157107 | MS.gene30824:CDS |
| GGAGCTAATAGACTTTATTC+TGG | 0.326721 | 6.4:+38159357 | MS.gene30824:CDS |
| TGTCTAATGAACAAGATATA+AGG | 0.355225 | 6.4:-38159586 | None:intergenic |
| GTTGCAAGAGCATAGAAGTA+TGG | 0.364087 | 6.4:-38160365 | None:intergenic |
| CACTCTTGGAATGTTGGTGA+TGG | 0.368628 | 6.4:+38157324 | MS.gene30824:CDS |
| TCAGCATAAGCCCGTTTAGA+AGG | 0.378915 | 6.4:-38157099 | None:intergenic |
| GGTTCGGATAAGCTTTATAC+TGG | 0.382445 | 6.4:+38158352 | MS.gene30824:CDS |
| GGTGTAAGTTTCTTCACTCT+TGG | 0.386356 | 6.4:+38157310 | MS.gene30824:CDS |
| ATGATGAAACTGTAAGGGTT+TGG | 0.387461 | 6.4:+38158380 | MS.gene30824:CDS |
| TAGACTTTATTCTGGTTCAA+TGG | 0.390656 | 6.4:+38159365 | MS.gene30824:CDS |
| GCCAAGTGAGAGTGTGGAAT+TGG | 0.392307 | 6.4:+38161054 | MS.gene30824:CDS |
| TGATGAAACTGTAAGGGTTT+GGG | 0.394534 | 6.4:+38158381 | MS.gene30824:CDS |
| AGGGTTTGGGACTGCCAGTC+TGG | 0.408736 | 6.4:+38158394 | MS.gene30824:CDS |
| TGCTACGGAAAGTGGAAATC+TGG | 0.412766 | 6.4:+38159706 | MS.gene30824:CDS |
| GTAAACACTGCAAGGTTTCA+AGG | 0.414343 | 6.4:-38159508 | None:intergenic |
| ATTAATGATATGCTCTTTGC+TGG | 0.418363 | 6.4:+38158897 | MS.gene30824:CDS |
| ATTCAAGGGAATTGTAGTTA+TGG | 0.419571 | 6.4:+38157282 | MS.gene30824:intron |
| TCTTTGTTGACTCAGCTTGA+AGG | 0.427109 | 6.4:+38157351 | MS.gene30824:CDS |
| GGAATTGTAGTTATGGAGAT+AGG | 0.434741 | 6.4:+38157289 | MS.gene30824:CDS |
| GGTGATGTCTGTTCTTTGCT+GGG | 0.435801 | 6.4:+38159556 | MS.gene30824:CDS |
| TTCTTCACTGGTGATGGAAC+CGG | 0.439518 | 6.4:+38161032 | MS.gene30824:CDS |
| TTTCTTCACTCTTGGAATGT+TGG | 0.440764 | 6.4:+38157318 | MS.gene30824:CDS |
| TTGGGACTGCCAGTCTGGAC+AGG | 0.443226 | 6.4:+38158399 | MS.gene30824:CDS |
| GTGAATTGCCTACTTCTAAT+GGG | 0.444534 | 6.4:+38157067 | MS.gene30824:CDS |
| AGGTAAGATATTCAACAAAC+AGG | 0.445583 | 6.4:+38160974 | MS.gene30824:CDS |
| AATTGCTATGCCCTCTGGTT+CGG | 0.446239 | 6.4:+38158336 | MS.gene30824:CDS |
| TAGGGTATAATCACCCTTTG+TGG | 0.446419 | 6.4:+38160319 | MS.gene30824:intron |
| GAAGTAATGATGAAACTGTA+AGG | 0.446756 | 6.4:+38158374 | MS.gene30824:CDS |
| GGAATGGTGCTCCTTCTAAA+CGG | 0.446924 | 6.4:+38157088 | MS.gene30824:CDS |
| GGCAATTCACTATGCAGAAA+AGG | 0.455554 | 6.4:-38157054 | None:intergenic |
| TTCATTAGACAAAACAGTAA+AGG | 0.464680 | 6.4:+38159598 | MS.gene30824:CDS |
| CGTGTTTACAATCGTCTTGG+TGG | 0.467498 | 6.4:+38156955 | MS.gene30824:CDS |
| TCAATGGAGATAAGTCTAGA+TGG | 0.468495 | 6.4:+38158843 | MS.gene30824:CDS |
| TTAGTGCACGTTATTGGATG+TGG | 0.476010 | 6.4:-38161090 | None:intergenic |
| TTGAATGAACAGGTTGTAAG+TGG | 0.476227 | 6.4:+38158313 | MS.gene30824:intron |
| GAATGGTGCTCCTTCTAAAC+GGG | 0.477698 | 6.4:+38157089 | MS.gene30824:CDS |
| TGTATAGCTGTGATCAATCT+TGG | 0.477996 | 6.4:+38158589 | MS.gene30824:CDS |
| ACTCTTGGAATGTTGGTGAT+GGG | 0.480654 | 6.4:+38157325 | MS.gene30824:CDS |
| AGTGGAATTGCTATGCCCTC+TGG | 0.484501 | 6.4:+38158331 | MS.gene30824:CDS |
| AGCATATTCTTCACTGGTGA+TGG | 0.496351 | 6.4:+38161026 | MS.gene30824:CDS |
| GGTGTTGTTTCGTTAGTTGT+TGG | 0.496526 | 6.4:+38159336 | MS.gene30824:CDS |
| CGAGCAATTCAGACTGGTCC+TGG | 0.502735 | 6.4:+38161002 | MS.gene30824:CDS |
| ATTCCACACTCTCACTTGGC+CGG | 0.510834 | 6.4:-38161051 | None:intergenic |
| CCTGGTAGCATATTCTTCAC+TGG | 0.512028 | 6.4:+38161020 | MS.gene30824:CDS |
| GTGTGGTATGCTACGGAAAG+TGG | 0.514044 | 6.4:+38159698 | MS.gene30824:CDS |
| TGCATCATGCATCCCACAAA+GGG | 0.514045 | 6.4:-38160332 | None:intergenic |
| AGGGTATAATCACCCTTTGT+GGG | 0.517484 | 6.4:+38160320 | MS.gene30824:intron |
| GTATGATCAGTGAAGGTCCC+TGG | 0.528209 | 6.4:+38158626 | MS.gene30824:CDS |
| TCCAATTCCACACTCTCACT+TGG | 0.529171 | 6.4:-38161055 | None:intergenic |
| AAGCGTGTTTACAATCGTCT+TGG | 0.534374 | 6.4:+38156952 | MS.gene30824:CDS |
| AGTGCATAAACTTGTCCGAC+AGG | 0.541835 | 6.4:-38158867 | None:intergenic |
| TTGGAACACGCAAAATTCAA+TGG | 0.543770 | 6.4:+38158827 | MS.gene30824:CDS |
| TTTGTTTCTATGGATTTCGA+CGG | 0.545744 | 6.4:+38156922 | None:intergenic |
| GTGGAATTGGATACCTGAAC+CGG | 0.547100 | 6.4:+38161067 | MS.gene30824:CDS |
| TGCACGTTATTGGATGTGGC+CGG | 0.547273 | 6.4:-38161086 | None:intergenic |
| ATTCTTTGAATCACCACCGT+TGG | 0.549048 | 6.4:-38156980 | None:intergenic |
| TCAGCTTGAAGGACATAAGA+AGG | 0.550026 | 6.4:+38157362 | MS.gene30824:CDS |
| TTGTAACAACCTGTCCAGAC+TGG | 0.550382 | 6.4:-38158408 | None:intergenic |
| ACTGACAGAGCACACGGCTG+TGG | 0.553338 | 6.4:+38159535 | MS.gene30824:CDS |
| AATCGTCTTGGTGGGTCCAA+CGG | 0.554468 | 6.4:+38156964 | MS.gene30824:CDS |
| TATGCTCTTTGCTGGTACGC+AGG | 0.562187 | 6.4:+38158905 | MS.gene30824:CDS |
| TTGCAAGAGCATAGAAGTAT+GGG | 0.564028 | 6.4:-38160364 | None:intergenic |
| GCACCATTCCCATTAGAAGT+AGG | 0.568465 | 6.4:-38157075 | None:intergenic |
| GTGTTTACAATCGTCTTGGT+GGG | 0.570120 | 6.4:+38156956 | MS.gene30824:CDS |
| TTGTTCAGATTTGCAGAGAG+AGG | 0.570280 | 6.4:+38160954 | MS.gene30824:intron |
| GTTTCTATGGATTTCGACGG+TGG | 0.572025 | 6.4:+38156925 | None:intergenic |
| AACTAACGAAACAACACCAC+GGG | 0.575189 | 6.4:-38159331 | None:intergenic |
| ATCAATCTTGGCGGTGAAGT+AGG | 0.580144 | 6.4:+38158601 | MS.gene30824:CDS |
| TATGCAGGTGTGGTATGCTA+CGG | 0.582090 | 6.4:+38159691 | MS.gene30824:intron |
| ATAAAGCTTATCCGAACCAG+AGG | 0.585965 | 6.4:-38158347 | None:intergenic |
| TTGCCTACTTCTAATGGGAA+TGG | 0.590538 | 6.4:+38157072 | MS.gene30824:CDS |
| CAGTGTCTGTAAACACTGCA+AGG | 0.596655 | 6.4:-38159516 | None:intergenic |
| TGCAGCTGGCTCGAAACAGT+TGG | 0.597581 | 6.4:-38159292 | None:intergenic |
| TGACCTTTAAGTGATGCAGC+TGG | 0.606030 | 6.4:-38159306 | None:intergenic |
| GAACCGGCCAAGTGAGAGTG+TGG | 0.613681 | 6.4:+38161048 | MS.gene30824:CDS |
| CCAGTGAAGAATATGCTACC+AGG | 0.618179 | 6.4:-38161020 | None:intergenic |
| AGGATGGAGCTATATTGGTA+TGG | 0.618970 | 6.4:+38159253 | MS.gene30824:intron |
| TCACTATGCAGAAAAGGACA+TGG | 0.619738 | 6.4:-38157048 | None:intergenic |
| CGTCTTGGTGGGTCCAACGG+TGG | 0.620014 | 6.4:+38156967 | MS.gene30824:CDS |
| GTGCATCATGCATCCCACAA+AGG | 0.625754 | 6.4:-38160333 | None:intergenic |
| AAGTAATGATGAAACTGTAA+GGG | 0.630252 | 6.4:+38158375 | MS.gene30824:CDS |
| ATAAGTCTAGATGGCCCTGT+CGG | 0.630869 | 6.4:+38158852 | MS.gene30824:CDS |
| GTAGGTTGTATGATCAGTGA+AGG | 0.632803 | 6.4:+38158619 | MS.gene30824:CDS |
| GAGGTGCGAGCAATTCAGAC+TGG | 0.636091 | 6.4:+38160996 | MS.gene30824:CDS |
| CTTACGATGGCAGATCATAG+AGG | 0.639029 | 6.4:-38160402 | None:intergenic |
| GGGCTTATGCTGATAATTCG+GGG | 0.639405 | 6.4:+38157109 | MS.gene30824:CDS |
| GTGCATAAACTTGTCCGACA+GGG | 0.646937 | 6.4:-38158866 | None:intergenic |
| ATAGCTGTGATCAATCTTGG+CGG | 0.647484 | 6.4:+38158592 | MS.gene30824:CDS |
| ACAGACACTGACAGAGCACA+CGG | 0.654604 | 6.4:+38159529 | MS.gene30824:CDS |
| TAAGATATTCAACAAACAGG+AGG | 0.665359 | 6.4:+38160977 | MS.gene30824:CDS |
| TCACTTAAAGGTCATACCCG+TGG | 0.682929 | 6.4:+38159315 | MS.gene30824:CDS |
| TGTGGGATGCATGATGCACA+AGG | 0.684145 | 6.4:+38160337 | MS.gene30824:CDS |
| TAAAGCTTATCCGAACCAGA+GGG | 0.687572 | 6.4:-38158346 | None:intergenic |
| CAACTAACGAAACAACACCA+CGG | 0.703335 | 6.4:-38159332 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTATAATTTTGAATTC+TGG | + | chr6.4:38157536-38157555 | MS.gene30824:intron | 10.0% |
| !!! | GAAGATTATTATTTTTAAAT+AGG | + | chr6.4:38160002-38160021 | MS.gene30824:intron | 10.0% |
| !!! | TTTAAGTTATTAATATACTA+TGG | + | chr6.4:38157885-38157904 | MS.gene30824:intron | 10.0% |
| !! | TGTAAAAATAAAAATCTTTC+TGG | - | chr6.4:38160182-38160201 | None:intergenic | 15.0% |
| !!! | AATATTCTTTTTAAGCAAAA+TGG | + | chr6.4:38159433-38159452 | MS.gene30824:intron | 15.0% |
| !!! | CTTATATATAACTATACTTT+TGG | + | chr6.4:38157725-38157744 | MS.gene30824:intron | 15.0% |
| !!! | GTATTGTCTTTTTTTTAATA+TGG | + | chr6.4:38160127-38160146 | MS.gene30824:intron | 15.0% |
| !! | AAAGTTATTCATGGAAAAAA+TGG | + | chr6.4:38160523-38160542 | MS.gene30824:intron | 20.0% |
| !! | AAATCATAACAATCAAAACA+AGG | - | chr6.4:38159672-38159691 | None:intergenic | 20.0% |
| !! | AATCATAACAATCAAAACAA+GGG | - | chr6.4:38159671-38159690 | None:intergenic | 20.0% |
| !! | ATAAAAAAATACGTTGACAA+TGG | - | chr6.4:38158945-38158964 | None:intergenic | 20.0% |
| !! | ATATTAAGCATTAAGCATAT+AGG | - | chr6.4:38158181-38158200 | None:intergenic | 20.0% |
| !! | CTTCAACTCTAATTTATTTA+AGG | + | chr6.4:38158722-38158741 | MS.gene30824:intron | 20.0% |
| !! | GAAATAACAACATTTCTAAT+GGG | - | chr6.4:38159825-38159844 | None:intergenic | 20.0% |
| !! | TATAAGCATATAAGTACATT+TGG | - | chr6.4:38157711-38157730 | None:intergenic | 20.0% |
| !! | TATTAAGCATTAAGCATATA+GGG | - | chr6.4:38158180-38158199 | None:intergenic | 20.0% |
| !! | TGAAATAACAACATTTCTAA+TGG | - | chr6.4:38159826-38159845 | None:intergenic | 20.0% |
| !! | TTGTTACAATTTCTTTCTAT+TGG | + | chr6.4:38158422-38158441 | MS.gene30824:intron | 20.0% |
| !! | TTTATATACCTATTTCAATG+CGG | + | chr6.4:38158984-38159003 | MS.gene30824:intron | 20.0% |
| !!! | AAAAACTTAGTTGATAAAAC+AGG | - | chr6.4:38160862-38160881 | None:intergenic | 20.0% |
| !!! | AAATTTTCAAACATCTCATA+AGG | - | chr6.4:38160067-38160086 | None:intergenic | 20.0% |
| !!! | AATTTTCAAACATCTCATAA+GGG | - | chr6.4:38160066-38160085 | None:intergenic | 20.0% |
| !!! | GTTGTTATTTCATGATTTTA+GGG | + | chr6.4:38159834-38159853 | MS.gene30824:intron | 20.0% |
| !!! | TAAGCTTTTTTTATAGCAAA+AGG | + | chr6.4:38157976-38157995 | MS.gene30824:intron | 20.0% |
| !!! | TGTTGTTATTTCATGATTTT+AGG | + | chr6.4:38159833-38159852 | MS.gene30824:intron | 20.0% |
| !!! | TTTAATGGAAATTTTATACG+TGG | - | chr6.4:38159868-38159887 | None:intergenic | 20.0% |
| ! | AAGTAATGATGAAACTGTAA+GGG | + | chr6.4:38158375-38158394 | MS.gene30824:CDS | 25.0% |
| ! | AATAAGTTGTTTATCCAAAC+AGG | - | chr6.4:38157912-38157931 | None:intergenic | 25.0% |
| ! | AATTATTTGAGCTTATCTAC+TGG | - | chr6.4:38158144-38158163 | None:intergenic | 25.0% |
| ! | ATAAGTTGTTTATCCAAACA+GGG | - | chr6.4:38157911-38157930 | None:intergenic | 25.0% |
| ! | ATCATAACAATCAAAACAAG+GGG | - | chr6.4:38159670-38159689 | None:intergenic | 25.0% |
| ! | ATTAAGCATTAAGCATATAG+GGG | - | chr6.4:38158179-38158198 | None:intergenic | 25.0% |
| ! | CTTCTTACCTTAACAAAATT+GGG | - | chr6.4:38158667-38158686 | None:intergenic | 25.0% |
| ! | GAAATAGAAAACAGATAGAA+AGG | - | chr6.4:38158471-38158490 | None:intergenic | 25.0% |
| ! | GTTCTTTAATAGAAGCAATA+GGG | + | chr6.4:38160722-38160741 | MS.gene30824:intron | 25.0% |
| ! | TAGCAATTCTATAACATATC+CGG | - | chr6.4:38157579-38157598 | None:intergenic | 25.0% |
| ! | TATATTTCCTAAGATCCTAA+AGG | - | chr6.4:38159143-38159162 | None:intergenic | 25.0% |
| ! | TCAATTGTCAAATGTTAAAG+AGG | + | chr6.4:38157791-38157810 | MS.gene30824:intron | 25.0% |
| ! | TCATACACGTAATTAATTTC+CGG | - | chr6.4:38158249-38158268 | None:intergenic | 25.0% |
| ! | TCTTCTTACCTTAACAAAAT+TGG | - | chr6.4:38158668-38158687 | None:intergenic | 25.0% |
| ! | TGTCTAATGAACAAGATATA+AGG | - | chr6.4:38159589-38159608 | None:intergenic | 25.0% |
| ! | TGTTCTTTAATAGAAGCAAT+AGG | + | chr6.4:38160721-38160740 | MS.gene30824:intron | 25.0% |
| ! | TTACTGTACAAAGTTATTCA+TGG | + | chr6.4:38160514-38160533 | MS.gene30824:intron | 25.0% |
| ! | TTCATTAGACAAAACAGTAA+AGG | + | chr6.4:38159598-38159617 | MS.gene30824:CDS | 25.0% |
| ! | TTCTACACAAAATGTTGTAT+TGG | + | chr6.4:38160239-38160258 | MS.gene30824:intron | 25.0% |
| ! | TTGAAAGAGTTTGTACTTAT+TGG | + | chr6.4:38157259-38157278 | MS.gene30824:intron | 25.0% |
| ! | TTGATTGTTATGATTTATGC+AGG | + | chr6.4:38159676-38159695 | MS.gene30824:intron | 25.0% |
| ! | TTTGTACTTATTGGATTCAA+GGG | + | chr6.4:38157268-38157287 | MS.gene30824:intron | 25.0% |
| !! | AATTTATTTATGTTTTCCCC+TGG | + | chr6.4:38159767-38159786 | MS.gene30824:intron | 25.0% |
| !! | ATTTTCAAACATCTCATAAG+GGG | - | chr6.4:38160065-38160084 | None:intergenic | 25.0% |
| !! | TTTTGTATACAAATCAAGCT+TGG | + | chr6.4:38160490-38160509 | MS.gene30824:intron | 25.0% |
| !!! | AACACAACAATTTAGTTCTT+TGG | - | chr6.4:38158553-38158572 | None:intergenic | 25.0% |
| !!! | AATCTTGATAGTGAAATCTA+TGG | + | chr6.4:38157432-38157451 | MS.gene30824:intron | 25.0% |
| !!! | ACTTTTGGTTATGTTTTGAA+TGG | + | chr6.4:38157740-38157759 | MS.gene30824:intron | 25.0% |
| !!! | CTGGTTTTTAGATCATTTAA+TGG | - | chr6.4:38159883-38159902 | None:intergenic | 25.0% |
| !!! | GTTTGTTTTTCATTATTTGC+AGG | + | chr6.4:38159620-38159639 | MS.gene30824:intron | 25.0% |
| !!! | TGTATTGGTATTTGTTATAG+TGG | + | chr6.4:38160254-38160273 | MS.gene30824:intron | 25.0% |
| !!! | TTTTGAATTCTGGTTTTGAA+TGG | + | chr6.4:38157546-38157565 | MS.gene30824:intron | 25.0% |
| !!! | TTTTTAAGCAAAATGGAACT+AGG | + | chr6.4:38159440-38159459 | MS.gene30824:intron | 25.0% |
| AAACTATGGTTTATGCCTTT+AGG | + | chr6.4:38159125-38159144 | MS.gene30824:intron | 30.0% | |
| AATGCCACATTATATTGTGA+AGG | - | chr6.4:38160838-38160857 | None:intergenic | 30.0% | |
| AGGTAAGATATTCAACAAAC+AGG | + | chr6.4:38160974-38160993 | MS.gene30824:CDS | 30.0% | |
| ATATGTAACAAGAGCAAGAA+TGG | - | chr6.4:38160439-38160458 | None:intergenic | 30.0% | |
| ATTAATGATATGCTCTTTGC+TGG | + | chr6.4:38158897-38158916 | MS.gene30824:CDS | 30.0% | |
| ATTCAAGGGAATTGTAGTTA+TGG | + | chr6.4:38157282-38157301 | MS.gene30824:intron | 30.0% | |
| CACAATACACTATTAGTACA+AGG | + | chr6.4:38160698-38160717 | MS.gene30824:intron | 30.0% | |
| CATACACGTAATTAATTTCC+GGG | - | chr6.4:38158248-38158267 | None:intergenic | 30.0% | |
| CATTATTTCCGCATTGAAAT+AGG | - | chr6.4:38158995-38159014 | None:intergenic | 30.0% | |
| CTTGCTCTTGTTACATATTA+TGG | + | chr6.4:38160441-38160460 | MS.gene30824:intron | 30.0% | |
| CTTGTACTAATAGTGTATTG+TGG | - | chr6.4:38160700-38160719 | None:intergenic | 30.0% | |
| GAAGTAATGATGAAACTGTA+AGG | + | chr6.4:38158374-38158393 | MS.gene30824:CDS | 30.0% | |
| GTTTGTACTTATTGGATTCA+AGG | + | chr6.4:38157267-38157286 | MS.gene30824:intron | 30.0% | |
| TAAGATATTCAACAAACAGG+AGG | + | chr6.4:38160977-38160996 | MS.gene30824:CDS | 30.0% | |
| TATGTAACAAGAGCAAGAAT+GGG | - | chr6.4:38160438-38160457 | None:intergenic | 30.0% | |
| TATTTGACAAAACTACATGG+AGG | - | chr6.4:38160625-38160644 | None:intergenic | 30.0% | |
| TCATTGAAAATGATCATGCA+GGG | - | chr6.4:38160107-38160126 | None:intergenic | 30.0% | |
| TGAAGAACTGCAGATTAAAA+TGG | - | chr6.4:38160569-38160588 | None:intergenic | 30.0% | |
| TGAGAATAGCTAATGAACAA+TGG | + | chr6.4:38158070-38158089 | MS.gene30824:intron | 30.0% | |
| TGATATGAGTTCAGTTCATT+AGG | - | chr6.4:38159906-38159925 | None:intergenic | 30.0% | |
| TGATCCTTCACAATATAATG+TGG | + | chr6.4:38160831-38160850 | MS.gene30824:intron | 30.0% | |
| TGTCAAAAATGTTCACATAG+TGG | + | chr6.4:38159025-38159044 | MS.gene30824:intron | 30.0% | |
| TTTAATAGAAGCAATAGGGT+TGG | + | chr6.4:38160726-38160745 | MS.gene30824:intron | 30.0% | |
| ! | ATGTTAGTAAGTGATGGAAT+TGG | + | chr6.4:38157817-38157836 | MS.gene30824:intron | 30.0% |
| ! | GAATGTGTTGATCTTATGTA+TGG | + | chr6.4:38159789-38159808 | MS.gene30824:intron | 30.0% |
| ! | TGCTATTTGACAAAACTACA+TGG | - | chr6.4:38160628-38160647 | None:intergenic | 30.0% |
| ! | TTCTTTGGCTTAATCTCAAA+AGG | - | chr6.4:38158538-38158557 | None:intergenic | 30.0% |
| !! | ATCAGAAAGTGTGTTTTCAA+TGG | + | chr6.4:38157001-38157020 | MS.gene30824:CDS | 30.0% |
| !! | TAGACTTTATTCTGGTTCAA+TGG | + | chr6.4:38159365-38159384 | MS.gene30824:CDS | 30.0% |
| !! | TTTGGTTATGTTTTGAATGG+TGG | + | chr6.4:38157743-38157762 | MS.gene30824:intron | 30.0% |
| !!! | TTTTTGGGTAATGAGTTGAT+GGG | + | chr6.4:38158274-38158293 | MS.gene30824:intron | 30.0% |
| !!! | TTTTTTGGGTAATGAGTTGA+TGG | + | chr6.4:38158273-38158292 | MS.gene30824:intron | 30.0% |
| ACATAAGATCAACACATTCC+AGG | - | chr6.4:38159788-38159807 | None:intergenic | 35.0% | |
| AGGCAAATGTTAGTAAGTGA+TGG | + | chr6.4:38157811-38157830 | MS.gene30824:intron | 35.0% | |
| AGTGAATTGCCTACTTCTAA+TGG | + | chr6.4:38157066-38157085 | MS.gene30824:CDS | 35.0% | |
| ATAAGATCAACACATTCCAG+GGG | - | chr6.4:38159786-38159805 | None:intergenic | 35.0% | |
| ATCAATGAGAACAACCAAAC+AGG | - | chr6.4:38158799-38158818 | None:intergenic | 35.0% | |
| ATCGTAACTGATATCCTGTT+TGG | + | chr6.4:38158782-38158801 | MS.gene30824:intron | 35.0% | |
| ATGATGAAACTGTAAGGGTT+TGG | + | chr6.4:38158380-38158399 | MS.gene30824:CDS | 35.0% | |
| CATAAGATCAACACATTCCA+GGG | - | chr6.4:38159787-38159806 | None:intergenic | 35.0% | |
| CTCATTGAAAATGATCATGC+AGG | - | chr6.4:38160108-38160127 | None:intergenic | 35.0% | |
| GATGTTATGATCTGCTTGTA+GGG | + | chr6.4:38160301-38160320 | MS.gene30824:intron | 35.0% | |
| GATTTATTAAGCGCGTCTAT+TGG | + | chr6.4:38158202-38158221 | MS.gene30824:intron | 35.0% | |
| GGAATTGTAGTTATGGAGAT+AGG | + | chr6.4:38157289-38157308 | MS.gene30824:CDS | 35.0% | |
| GGAGCTAATAGACTTTATTC+TGG | + | chr6.4:38159357-38159376 | MS.gene30824:CDS | 35.0% | |
| GTGAATTGCCTACTTCTAAT+GGG | + | chr6.4:38157067-38157086 | MS.gene30824:CDS | 35.0% | |
| TAATATACTATGGCCCTGTT+TGG | + | chr6.4:38157895-38157914 | MS.gene30824:intron | 35.0% | |
| TCAATGGAGATAAGTCTAGA+TGG | + | chr6.4:38158843-38158862 | MS.gene30824:CDS | 35.0% | |
| TGATGAAACTGTAAGGGTTT+GGG | + | chr6.4:38158381-38158400 | MS.gene30824:CDS | 35.0% | |
| TGATGTTATGATCTGCTTGT+AGG | + | chr6.4:38160300-38160319 | MS.gene30824:intron | 35.0% | |
| TGTATAGCTGTGATCAATCT+TGG | + | chr6.4:38158589-38158608 | MS.gene30824:CDS | 35.0% | |
| TGTTATGATTTATGCAGGTG+TGG | + | chr6.4:38159681-38159700 | MS.gene30824:intron | 35.0% | |
| TTGAATGAACAGGTTGTAAG+TGG | + | chr6.4:38158313-38158332 | MS.gene30824:intron | 35.0% | |
| TTGGAACACGCAAAATTCAA+TGG | + | chr6.4:38158827-38158846 | MS.gene30824:CDS | 35.0% | |
| TTTATCAGTGTTGTCAATCG+AGG | - | chr6.4:38160800-38160819 | None:intergenic | 35.0% | |
| TTTCTTCACTCTTGGAATGT+TGG | + | chr6.4:38157318-38157337 | MS.gene30824:CDS | 35.0% | |
| ! | CTATCTGGGATTGAAAACTA+TGG | + | chr6.4:38159111-38159130 | MS.gene30824:intron | 35.0% |
| ! | GACACTGTCTTTTATATCTC+TGG | + | chr6.4:38160887-38160906 | MS.gene30824:intron | 35.0% |
| ! | GTTTTGTCAAATAGCAGCTA+TGG | + | chr6.4:38160632-38160651 | MS.gene30824:intron | 35.0% |
| ! | TAGTTTTCAATCCCAGATAG+CGG | - | chr6.4:38159111-38159130 | None:intergenic | 35.0% |
| ! | TGGCATACCCAATTTTGTTA+AGG | + | chr6.4:38158657-38158676 | MS.gene30824:CDS | 35.0% |
| ! | TTGCAAGAGCATAGAAGTAT+GGG | - | chr6.4:38160367-38160386 | None:intergenic | 35.0% |
| ! | TTTGGTTTCGTTGAATGAAC+AGG | + | chr6.4:38158303-38158322 | MS.gene30824:intron | 35.0% |
| !! | GTTTATGCCTTTAGGATCTT+AGG | + | chr6.4:38159133-38159152 | MS.gene30824:intron | 35.0% |
| !! | TATTTGTTATAGTGGTGACG+TGG | + | chr6.4:38160262-38160281 | MS.gene30824:intron | 35.0% |
| !!! | ACGTGTATGAGTGCTTTTTT+GGG | + | chr6.4:38158259-38158278 | MS.gene30824:intron | 35.0% |
| !!! | GGTTGTTCTCATTGATTTTC+AGG | + | chr6.4:38158803-38158822 | MS.gene30824:intron | 35.0% |
| !!! | TACGTGTATGAGTGCTTTTT+TGG | + | chr6.4:38158258-38158277 | MS.gene30824:intron | 35.0% |
| !!! | TGAATTCTGGTTTTGAATGG+TGG | + | chr6.4:38157549-38157568 | MS.gene30824:intron | 35.0% |
| !!! | TGGATCGAGTTTTAATTCGT+GGG | + | chr6.4:38157152-38157171 | MS.gene30824:intron | 35.0% |
| !!! | TTCTCATTGATTTTCAGGCT+TGG | + | chr6.4:38158808-38158827 | MS.gene30824:intron | 35.0% |
| AAACAAGTTGCGCCATTCAT+GGG | - | chr6.4:38157641-38157660 | None:intergenic | 40.0% | |
| AACTAACGAAACAACACCAC+GGG | - | chr6.4:38159334-38159353 | None:intergenic | 40.0% | |
| AAGCGTGTTTACAATCGTCT+TGG | + | chr6.4:38156952-38156971 | MS.gene30824:CDS | 40.0% | |
| ACGGGCTTATGCTGATAATT+CGG | + | chr6.4:38157107-38157126 | MS.gene30824:CDS | 40.0% | |
| ACGTGTGTACATAAACTCGA+CGG | - | chr6.4:38157473-38157492 | None:intergenic | 40.0% | |
| AGCATATTCTTCACTGGTGA+TGG | + | chr6.4:38161026-38161045 | MS.gene30824:CDS | 40.0% | |
| AGGATGGAGCTATATTGGTA+TGG | + | chr6.4:38159253-38159272 | MS.gene30824:intron | 40.0% | |
| AGGGTATAATCACCCTTTGT+GGG | + | chr6.4:38160320-38160339 | MS.gene30824:intron | 40.0% | |
| ATAAAGCTTATCCGAACCAG+AGG | - | chr6.4:38158350-38158369 | None:intergenic | 40.0% | |
| ATAGCTGTGATCAATCTTGG+CGG | + | chr6.4:38158592-38158611 | MS.gene30824:CDS | 40.0% | |
| ATGAGTTCAGTTCATTAGGC+TGG | - | chr6.4:38159902-38159921 | None:intergenic | 40.0% | |
| ATTCTTTGAATCACCACCGT+TGG | - | chr6.4:38156983-38157002 | None:intergenic | 40.0% | |
| CAACTAACGAAACAACACCA+CGG | - | chr6.4:38159335-38159354 | None:intergenic | 40.0% | |
| GATAGTGTGAAACCCATGAA+TGG | + | chr6.4:38157626-38157645 | MS.gene30824:intron | 40.0% | |
| GGCAATTCACTATGCAGAAA+AGG | - | chr6.4:38157057-38157076 | None:intergenic | 40.0% | |
| GGGAAATCAACTACTTACGA+TGG | - | chr6.4:38160418-38160437 | None:intergenic | 40.0% | |
| GGTGTAAGTTTCTTCACTCT+TGG | + | chr6.4:38157310-38157329 | MS.gene30824:CDS | 40.0% | |
| GTAAACACTGCAAGGTTTCA+AGG | - | chr6.4:38159511-38159530 | None:intergenic | 40.0% | |
| GTAGGTTGTATGATCAGTGA+AGG | + | chr6.4:38158619-38158638 | MS.gene30824:CDS | 40.0% | |
| GTGTTTACAATCGTCTTGGT+GGG | + | chr6.4:38156956-38156975 | MS.gene30824:CDS | 40.0% | |
| TAAACAAGTTGCGCCATTCA+TGG | - | chr6.4:38157642-38157661 | None:intergenic | 40.0% | |
| TAAAGCTTATCCGAACCAGA+GGG | - | chr6.4:38158349-38158368 | None:intergenic | 40.0% | |
| TACACCTTCAATTCTCTTGC+AGG | + | chr6.4:38159233-38159252 | MS.gene30824:intron | 40.0% | |
| TAGGGTATAATCACCCTTTG+TGG | + | chr6.4:38160319-38160338 | MS.gene30824:intron | 40.0% | |
| TATTAAGCGCGTCTATTGGT+AGG | + | chr6.4:38158206-38158225 | MS.gene30824:intron | 40.0% | |
| TCACTATGCAGAAAAGGACA+TGG | - | chr6.4:38157051-38157070 | None:intergenic | 40.0% | |
| TCAGCTTGAAGGACATAAGA+AGG | + | chr6.4:38157362-38157381 | MS.gene30824:CDS | 40.0% | |
| TCCACACCTGAAAGAAACAA+CGG | - | chr6.4:38159487-38159506 | None:intergenic | 40.0% | |
| TTAGTGCACGTTATTGGATG+TGG | - | chr6.4:38161093-38161112 | None:intergenic | 40.0% | |
| TTGCCTACTTCTAATGGGAA+TGG | + | chr6.4:38157072-38157091 | MS.gene30824:CDS | 40.0% | |
| TTGTTCAGATTTGCAGAGAG+AGG | + | chr6.4:38160954-38160973 | MS.gene30824:intron | 40.0% | |
| ! | ATGGCGCAACTTGTTTATCA+TGG | + | chr6.4:38157645-38157664 | MS.gene30824:intron | 40.0% |
| ! | GGTTCGGATAAGCTTTATAC+TGG | + | chr6.4:38158352-38158371 | MS.gene30824:CDS | 40.0% |
| ! | GTTGCAAGAGCATAGAAGTA+TGG | - | chr6.4:38160368-38160387 | None:intergenic | 40.0% |
| ! | TCTCCTGGTATTCCAGTTTT+GGG | + | chr6.4:38159069-38159088 | MS.gene30824:intron | 40.0% |
| !! | ACTCTTGGAATGTTGGTGAT+GGG | + | chr6.4:38157325-38157344 | MS.gene30824:CDS | 40.0% |
| !! | ATTCGGGGTTTTCTGGTAAT+CGG | + | chr6.4:38157124-38157143 | MS.gene30824:intron | 40.0% |
| !! | GGTGTTGTTTCGTTAGTTGT+TGG | + | chr6.4:38159336-38159355 | MS.gene30824:CDS | 40.0% |
| !! | TCTTTGTTGACTCAGCTTGA+AGG | + | chr6.4:38157351-38157370 | MS.gene30824:CDS | 40.0% |
| !! | TTCCATCCGTTGTTTCTTTC+AGG | + | chr6.4:38159478-38159497 | MS.gene30824:intron | 40.0% |
| !!! | GATCGAGTTTTAATTCGTGG+GGG | + | chr6.4:38157154-38157173 | MS.gene30824:intron | 40.0% |
| !!! | GGATCGAGTTTTAATTCGTG+GGG | + | chr6.4:38157153-38157172 | MS.gene30824:intron | 40.0% |
| !!! | GGTTTTGAATGGTGGATAAC+CGG | + | chr6.4:38157557-38157576 | MS.gene30824:intron | 40.0% |
| !!! | GTGGATCGAGTTTTAATTCG+TGG | + | chr6.4:38157151-38157170 | MS.gene30824:intron | 40.0% |
| !!! | TGAGTTGATGGGATGAGTTT+TGG | + | chr6.4:38158285-38158304 | MS.gene30824:intron | 40.0% |
| AAACTCGACGGCAAACATGT+TGG | - | chr6.4:38157461-38157480 | None:intergenic | 45.0% | |
| AACCCCAAAACTGGAATACC+AGG | - | chr6.4:38159075-38159094 | None:intergenic | 45.0% | |
| AATTGCTATGCCCTCTGGTT+CGG | + | chr6.4:38158336-38158355 | MS.gene30824:CDS | 45.0% | |
| AGTGCATAAACTTGTCCGAC+AGG | - | chr6.4:38158870-38158889 | None:intergenic | 45.0% | |
| ATAAGTCTAGATGGCCCTGT+CGG | + | chr6.4:38158852-38158871 | MS.gene30824:CDS | 45.0% | |
| ATCAATCTTGGCGGTGAAGT+AGG | + | chr6.4:38158601-38158620 | MS.gene30824:CDS | 45.0% | |
| CAAAACTGGAATACCAGGAG+AGG | - | chr6.4:38159070-38159089 | None:intergenic | 45.0% | |
| CACCTGAAAGAAACAACGGA+TGG | - | chr6.4:38159483-38159502 | None:intergenic | 45.0% | |
| CAGTGTCTGTAAACACTGCA+AGG | - | chr6.4:38159519-38159538 | None:intergenic | 45.0% | |
| CCAGTGAAGAATATGCTACC+AGG | - | chr6.4:38161023-38161042 | None:intergenic | 45.0% | |
| CCATCCTGCAAGAGAATTGA+AGG | - | chr6.4:38159240-38159259 | None:intergenic | 45.0% | |
| CCTGGTAGCATATTCTTCAC+TGG | + | chr6.4:38161020-38161039 | MS.gene30824:CDS | 45.0% | |
| CCTTCAATTCTCTTGCAGGA+TGG | + | chr6.4:38159237-38159256 | MS.gene30824:intron | 45.0% | |
| CGGGCTTATGCTGATAATTC+GGG | + | chr6.4:38157108-38157127 | MS.gene30824:CDS | 45.0% | |
| CGTGTTTACAATCGTCTTGG+TGG | + | chr6.4:38156955-38156974 | MS.gene30824:CDS | 45.0% | |
| CTTACGATGGCAGATCATAG+AGG | - | chr6.4:38160405-38160424 | None:intergenic | 45.0% | |
| CTTGCAGGATGGAGCTATAT+TGG | + | chr6.4:38159248-38159267 | MS.gene30824:intron | 45.0% | |
| GAATGGTGCTCCTTCTAAAC+GGG | + | chr6.4:38157089-38157108 | MS.gene30824:CDS | 45.0% | |
| GAGGATAGTGTGAGATGGAA+TGG | - | chr6.4:38159051-38159070 | None:intergenic | 45.0% | |
| GCACCATTCCCATTAGAAGT+AGG | - | chr6.4:38157078-38157097 | None:intergenic | 45.0% | |
| GGAATGGTGCTCCTTCTAAA+CGG | + | chr6.4:38157088-38157107 | MS.gene30824:CDS | 45.0% | |
| GGGCTTATGCTGATAATTCG+GGG | + | chr6.4:38157109-38157128 | MS.gene30824:CDS | 45.0% | |
| GGGTTTCACACTATCTAGAC+AGG | - | chr6.4:38157621-38157640 | None:intergenic | 45.0% | |
| GGTAGCACATTAGCAATACC+CGG | + | chr6.4:38158227-38158246 | MS.gene30824:intron | 45.0% | |
| GGTATGCCAACAAAAAGCCA+GGG | - | chr6.4:38158646-38158665 | None:intergenic | 45.0% | |
| GGTGATGTCTGTTCTTTGCT+GGG | + | chr6.4:38159556-38159575 | MS.gene30824:CDS | 45.0% | |
| GTGCATAAACTTGTCCGACA+GGG | - | chr6.4:38158869-38158888 | None:intergenic | 45.0% | |
| GTGGAATTGGATACCTGAAC+CGG | + | chr6.4:38161067-38161086 | MS.gene30824:CDS | 45.0% | |
| GTGTTGTCAATCGAGGATCA+TGG | - | chr6.4:38160793-38160812 | None:intergenic | 45.0% | |
| GTTACGATACTACGTCTAGC+AGG | - | chr6.4:38158770-38158789 | None:intergenic | 45.0% | |
| TATGCAGGTGTGGTATGCTA+CGG | + | chr6.4:38159691-38159710 | MS.gene30824:intron | 45.0% | |
| TCACTTAAAGGTCATACCCG+TGG | + | chr6.4:38159315-38159334 | MS.gene30824:CDS | 45.0% | |
| TCAGCATAAGCCCGTTTAGA+AGG | - | chr6.4:38157102-38157121 | None:intergenic | 45.0% | |
| TCATAAGGGGCAAGCAGTAT+TGG | - | chr6.4:38160052-38160071 | None:intergenic | 45.0% | |
| TCCAATTCCACACTCTCACT+TGG | - | chr6.4:38161058-38161077 | None:intergenic | 45.0% | |
| TGACCTTTAAGTGATGCAGC+TGG | - | chr6.4:38159309-38159328 | None:intergenic | 45.0% | |
| TGCATCATGCATCCCACAAA+GGG | - | chr6.4:38160335-38160354 | None:intergenic | 45.0% | |
| TGCTACGGAAAGTGGAAATC+TGG | + | chr6.4:38159706-38159725 | MS.gene30824:CDS | 45.0% | |
| TTGTAACAACCTGTCCAGAC+TGG | - | chr6.4:38158411-38158430 | None:intergenic | 45.0% | |
| ! | CACTCTTGGAATGTTGGTGA+TGG | + | chr6.4:38157324-38157343 | MS.gene30824:CDS | 45.0% |
| ! | CTCCTGGTATTCCAGTTTTG+GGG | + | chr6.4:38159070-38159089 | MS.gene30824:intron | 45.0% |
| ! | CTCTCCTGGTATTCCAGTTT+TGG | + | chr6.4:38159068-38159087 | MS.gene30824:intron | 45.0% |
| ! | GCTGATAATTCGGGGTTTTC+TGG | + | chr6.4:38157117-38157136 | MS.gene30824:CDS | 45.0% |
| ! | GTGTGTTTTCAATGGCAAGC+AGG | + | chr6.4:38157009-38157028 | MS.gene30824:CDS | 45.0% |
| ! | TGGTGATGTCTGTTCTTTGC+TGG | + | chr6.4:38159555-38159574 | MS.gene30824:CDS | 45.0% |
| !! | TCCGTTGTTTCTTTCAGGTG+TGG | + | chr6.4:38159483-38159502 | MS.gene30824:intron | 45.0% |
| !! | TTCTTCACTGGTGATGGAAC+CGG | + | chr6.4:38161032-38161051 | MS.gene30824:CDS | 45.0% |
| ACAGACACTGACAGAGCACA+CGG | + | chr6.4:38159529-38159548 | MS.gene30824:CDS | 50.0% | |
| AGTGGAATTGCTATGCCCTC+TGG | + | chr6.4:38158331-38158350 | MS.gene30824:CDS | 50.0% | |
| ATTCCACACTCTCACTTGGC+CGG | - | chr6.4:38161054-38161073 | None:intergenic | 50.0% | |
| CAGGAGAGGATAGTGTGAGA+TGG | - | chr6.4:38159056-38159075 | None:intergenic | 50.0% | |
| CATCTCACACTATCCTCTCC+TGG | + | chr6.4:38159054-38159073 | MS.gene30824:intron | 50.0% | |
| GAGCCAGCTGCATCACTTAA+AGG | + | chr6.4:38159303-38159322 | MS.gene30824:CDS | 50.0% | |
| GGGTATGCCAACAAAAAGCC+AGG | - | chr6.4:38158647-38158666 | None:intergenic | 50.0% | |
| GTATGATCAGTGAAGGTCCC+TGG | + | chr6.4:38158626-38158645 | MS.gene30824:CDS | 50.0% | |
| GTGCATCATGCATCCCACAA+AGG | - | chr6.4:38160336-38160355 | None:intergenic | 50.0% | |
| GTGTGGTATGCTACGGAAAG+TGG | + | chr6.4:38159698-38159717 | MS.gene30824:CDS | 50.0% | |
| TATGCTCTTTGCTGGTACGC+AGG | + | chr6.4:38158905-38158924 | MS.gene30824:CDS | 50.0% | |
| TGCACGTTATTGGATGTGGC+CGG | - | chr6.4:38161089-38161108 | None:intergenic | 50.0% | |
| TGTGGGATGCATGATGCACA+AGG | + | chr6.4:38160337-38160356 | MS.gene30824:CDS | 50.0% | |
| ! | AATCGTCTTGGTGGGTCCAA+CGG | + | chr6.4:38156964-38156983 | MS.gene30824:CDS | 50.0% |
| ! | GCCAAGTGAGAGTGTGGAAT+TGG | + | chr6.4:38161054-38161073 | MS.gene30824:CDS | 50.0% |
| ! | TTATTGGATGTGGCCGGTTC+AGG | - | chr6.4:38161083-38161102 | None:intergenic | 50.0% |
| !! | GAAGGTCCCTGGCTTTTTGT+TGG | + | chr6.4:38158637-38158656 | MS.gene30824:CDS | 50.0% |
| !! | TTTTCTGGTAATCGGCGTGG+TGG | + | chr6.4:38157132-38157151 | MS.gene30824:intron | 50.0% |
| !!! | AGTTTTAATTCGTGGGGGCC+GGG | + | chr6.4:38157159-38157178 | MS.gene30824:intron | 50.0% |
| !!! | GAGTTTTAATTCGTGGGGGC+CGG | + | chr6.4:38157158-38157177 | MS.gene30824:intron | 50.0% |
| GAGGTGCGAGCAATTCAGAC+TGG | + | chr6.4:38160996-38161015 | MS.gene30824:CDS | 55.0% | |
| ! | CGAGCAATTCAGACTGGTCC+TGG | + | chr6.4:38161002-38161021 | MS.gene30824:CDS | 55.0% |
| ! | GGCAGCTCTAACCCCAAAAC+TGG | - | chr6.4:38159084-38159103 | None:intergenic | 55.0% |
| ! | TCAATCCCAGATAGCGGCAC+TGG | - | chr6.4:38159105-38159124 | None:intergenic | 55.0% |
| !! | GGGTTTTCTGGTAATCGGCG+TGG | + | chr6.4:38157129-38157148 | MS.gene30824:intron | 55.0% |
| !! | TGCAGCTGGCTCGAAACAGT+TGG | - | chr6.4:38159295-38159314 | None:intergenic | 55.0% |
| !!! | GTTTTAATTCGTGGGGGCCG+GGG | + | chr6.4:38157160-38157179 | MS.gene30824:intron | 55.0% |
| ACTGACAGAGCACACGGCTG+TGG | + | chr6.4:38159535-38159554 | MS.gene30824:CDS | 60.0% | |
| GAACCGGCCAAGTGAGAGTG+TGG | + | chr6.4:38161048-38161067 | MS.gene30824:CDS | 60.0% | |
| TTGGGACTGCCAGTCTGGAC+AGG | + | chr6.4:38158399-38158418 | MS.gene30824:CDS | 60.0% | |
| ! | AGCTGCCAGTGCCGCTATCT+GGG | + | chr6.4:38159097-38159116 | MS.gene30824:intron | 60.0% |
| ! | AGGGTTTGGGACTGCCAGTC+TGG | + | chr6.4:38158394-38158413 | MS.gene30824:CDS | 60.0% |
| !! | GTAGGTGGTGGTGGTGGTAG+AGG | + | chr6.4:38157222-38157241 | MS.gene30824:intron | 60.0% |
| ! | CGTCTTGGTGGGTCCAACGG+TGG | + | chr6.4:38156967-38156986 | MS.gene30824:CDS | 65.0% |
| ! | GAGCTGCCAGTGCCGCTATC+TGG | + | chr6.4:38159096-38159115 | MS.gene30824:intron | 65.0% |
| !! | AGAAGTGGCGGACGTGGTCG+CGG | + | chr6.4:38157183-38157202 | MS.gene30824:intron | 65.0% |
| !! | GGTGGTGTAGGTGGTGGTGG+TGG | + | chr6.4:38157216-38157235 | MS.gene30824:intron | 65.0% |
| CCACGTCCGCCACTTCTCCC+CGG | - | chr6.4:38157180-38157199 | None:intergenic | 70.0% | |
| GGACGGGGTGGTGTAGGTGG+TGG | + | chr6.4:38157210-38157229 | MS.gene30824:intron | 70.0% | |
| ! | CGGGGTGGTGTAGGTGGTGG+TGG | + | chr6.4:38157213-38157232 | MS.gene30824:intron | 70.0% |
| ACGTGGTCGCGGTGGGGGAC+GGG | + | chr6.4:38157194-38157213 | MS.gene30824:intron | 75.0% | |
| GACGTGGTCGCGGTGGGGGA+CGG | + | chr6.4:38157193-38157212 | MS.gene30824:intron | 75.0% | |
| GGGGGACGGGGTGGTGTAGG+TGG | + | chr6.4:38157207-38157226 | MS.gene30824:intron | 75.0% | |
| GGTGGGGGACGGGGTGGTGT+AGG | + | chr6.4:38157204-38157223 | MS.gene30824:intron | 75.0% | |
| TCGTGGGGGCCGGGGAGAAG+TGG | + | chr6.4:38157168-38157187 | MS.gene30824:intron | 75.0% | |
| TGGGGGCCGGGGAGAAGTGG+CGG | + | chr6.4:38157171-38157190 | MS.gene30824:intron | 75.0% | |
| ! | TGGCGGACGTGGTCGCGGTG+GGG | + | chr6.4:38157188-38157207 | MS.gene30824:intron | 75.0% |
| !! | AGTGGCGGACGTGGTCGCGG+TGG | + | chr6.4:38157186-38157205 | MS.gene30824:intron | 75.0% |
| !! | CCGGGGAGAAGTGGCGGACG+TGG | + | chr6.4:38157177-38157196 | MS.gene30824:intron | 75.0% |
| !! | GTGGCGGACGTGGTCGCGGT+GGG | + | chr6.4:38157187-38157206 | MS.gene30824:intron | 75.0% |
| ! | CGTGGTCGCGGTGGGGGACG+GGG | + | chr6.4:38157195-38157214 | MS.gene30824:intron | 80.0% |
| ! | GGCGGACGTGGTCGCGGTGG+GGG | + | chr6.4:38157189-38157208 | MS.gene30824:intron | 80.0% |
| ! | GGTCGCGGTGGGGGACGGGG+TGG | + | chr6.4:38157198-38157217 | MS.gene30824:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 38156931 | 38161112 | 38156931 | ID=MS.gene30824 |
| chr6.4 | mRNA | 38156931 | 38161112 | 38156931 | ID=MS.gene30824.t1;Parent=MS.gene30824 |
| chr6.4 | exon | 38156931 | 38157138 | 38156931 | ID=MS.gene30824.t1.exon1;Parent=MS.gene30824.t1 |
| chr6.4 | CDS | 38156931 | 38157138 | 38156931 | ID=cds.MS.gene30824.t1;Parent=MS.gene30824.t1 |
| chr6.4 | exon | 38157289 | 38157383 | 38157289 | ID=MS.gene30824.t1.exon2;Parent=MS.gene30824.t1 |
| chr6.4 | CDS | 38157289 | 38157383 | 38157289 | ID=cds.MS.gene30824.t1;Parent=MS.gene30824.t1 |
| chr6.4 | exon | 38158325 | 38158420 | 38158325 | ID=MS.gene30824.t1.exon3;Parent=MS.gene30824.t1 |
| chr6.4 | CDS | 38158325 | 38158420 | 38158325 | ID=cds.MS.gene30824.t1;Parent=MS.gene30824.t1 |
| chr6.4 | exon | 38158589 | 38158678 | 38158589 | ID=MS.gene30824.t1.exon4;Parent=MS.gene30824.t1 |
| chr6.4 | CDS | 38158589 | 38158678 | 38158589 | ID=cds.MS.gene30824.t1;Parent=MS.gene30824.t1 |
| chr6.4 | exon | 38158825 | 38158926 | 38158825 | ID=MS.gene30824.t1.exon5;Parent=MS.gene30824.t1 |
| chr6.4 | CDS | 38158825 | 38158926 | 38158825 | ID=cds.MS.gene30824.t1;Parent=MS.gene30824.t1 |
| chr6.4 | exon | 38159255 | 38159401 | 38159255 | ID=MS.gene30824.t1.exon6;Parent=MS.gene30824.t1 |
| chr6.4 | CDS | 38159255 | 38159401 | 38159255 | ID=cds.MS.gene30824.t1;Parent=MS.gene30824.t1 |
| chr6.4 | exon | 38159500 | 38159619 | 38159500 | ID=MS.gene30824.t1.exon7;Parent=MS.gene30824.t1 |
| chr6.4 | CDS | 38159500 | 38159619 | 38159500 | ID=cds.MS.gene30824.t1;Parent=MS.gene30824.t1 |
| chr6.4 | exon | 38159698 | 38159757 | 38159698 | ID=MS.gene30824.t1.exon8;Parent=MS.gene30824.t1 |
| chr6.4 | CDS | 38159698 | 38159757 | 38159698 | ID=cds.MS.gene30824.t1;Parent=MS.gene30824.t1 |
| chr6.4 | exon | 38160322 | 38160419 | 38160322 | ID=MS.gene30824.t1.exon9;Parent=MS.gene30824.t1 |
| chr6.4 | CDS | 38160322 | 38160419 | 38160322 | ID=cds.MS.gene30824.t1;Parent=MS.gene30824.t1 |
| chr6.4 | exon | 38160962 | 38161112 | 38160962 | ID=MS.gene30824.t1.exon10;Parent=MS.gene30824.t1 |
| chr6.4 | CDS | 38160962 | 38161112 | 38160962 | ID=cds.MS.gene30824.t1;Parent=MS.gene30824.t1 |
| Gene Sequence |
| Protein sequence |
