Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79299.t1 | XP_013452551.1 | 86.5 | 421 | 7 | 1 | 1 | 371 | 1 | 421 | 1.30E-159 | 572.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79299.t1 | Q9FNZ2 | 64.7 | 414 | 102 | 4 | 1 | 371 | 3 | 415 | 1.4e-114 | 414.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79299.t1 | A0A072U9U5 | 86.5 | 421 | 7 | 1 | 1 | 371 | 1 | 421 | 9.5e-160 | 572.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene79299.t1 | TF | C3H |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene30824 | MS.gene79299 | PPI |
| MS.gene79299 | MS.gene86578 | PPI |
| MS.gene09870 | MS.gene79299 | PPI |
| MS.gene79299 | MS.gene27773 | PPI |
| MS.gene79299 | MS.gene62770 | PPI |
| MS.gene79299 | MS.gene30824 | PPI |
| MS.gene79299 | MS.gene24037 | PPI |
| MS.gene79299 | MS.gene27556 | PPI |
| MS.gene79299 | MS.gene061878 | PPI |
| MS.gene79299 | MS.gene97690 | PPI |
| MS.gene79299 | MS.gene016240 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79299.t1 | MTR_6g465150 | 87.411 | 421 | 3 | 1 | 1 | 371 | 1 | 421 | 0.0 | 739 |
| MS.gene79299.t1 | MTR_8g028700 | 53.289 | 304 | 138 | 3 | 71 | 370 | 202 | 505 | 1.02e-117 | 353 |
| MS.gene79299.t1 | MTR_8g032850 | 49.843 | 319 | 154 | 3 | 54 | 370 | 576 | 890 | 9.74e-110 | 343 |
| MS.gene79299.t1 | MTR_8g032850 | 44.878 | 205 | 104 | 4 | 72 | 269 | 240 | 442 | 1.11e-48 | 177 |
| MS.gene79299.t1 | MTR_2g101410 | 28.319 | 226 | 133 | 7 | 99 | 295 | 187 | 412 | 7.38e-16 | 79.3 |
| MS.gene79299.t1 | MTR_8g089650 | 26.316 | 228 | 117 | 6 | 79 | 288 | 232 | 426 | 6.68e-13 | 70.5 |
| MS.gene79299.t1 | MTR_1g021590 | 28.205 | 234 | 140 | 8 | 99 | 307 | 218 | 448 | 1.81e-12 | 69.3 |
| MS.gene79299.t1 | MTR_1g021590 | 24.912 | 285 | 181 | 12 | 93 | 366 | 105 | 367 | 1.79e-11 | 66.2 |
| MS.gene79299.t1 | MTR_3g110185 | 28.571 | 224 | 117 | 8 | 99 | 288 | 193 | 407 | 2.04e-12 | 69.7 |
| MS.gene79299.t1 | MTR_4g105700 | 25.177 | 282 | 175 | 12 | 96 | 351 | 398 | 669 | 6.74e-12 | 67.8 |
| MS.gene79299.t1 | MTR_4g068457 | 28.125 | 224 | 129 | 9 | 99 | 292 | 237 | 458 | 9.14e-12 | 67.0 |
| MS.gene79299.t1 | MTR_2g016690 | 25.514 | 243 | 150 | 10 | 97 | 316 | 90 | 324 | 1.34e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79299.t1 | AT4G25440 | 62.954 | 413 | 111 | 3 | 1 | 371 | 3 | 415 | 0.0 | 550 |
| MS.gene79299.t1 | AT4G25440 | 62.954 | 413 | 111 | 3 | 1 | 371 | 3 | 415 | 0.0 | 550 |
| MS.gene79299.t1 | AT4G25440 | 62.954 | 413 | 111 | 3 | 1 | 371 | 3 | 415 | 0.0 | 550 |
| MS.gene79299.t1 | AT5G51980 | 60.373 | 429 | 119 | 4 | 1 | 378 | 1 | 429 | 0.0 | 542 |
| MS.gene79299.t1 | AT5G51980 | 60.373 | 429 | 119 | 4 | 1 | 378 | 1 | 429 | 0.0 | 542 |
| MS.gene79299.t1 | AT5G40880 | 50.156 | 321 | 156 | 3 | 54 | 372 | 114 | 432 | 5.42e-111 | 333 |
| MS.gene79299.t1 | AT5G40880 | 50.156 | 321 | 156 | 3 | 54 | 372 | 143 | 461 | 1.07e-110 | 333 |
| MS.gene79299.t1 | AT5G49200 | 49.026 | 308 | 152 | 3 | 70 | 372 | 101 | 408 | 1.13e-104 | 316 |
| MS.gene79299.t1 | AT1G24530 | 27.143 | 210 | 131 | 7 | 99 | 288 | 194 | 401 | 3.48e-14 | 74.3 |
| MS.gene79299.t1 | AT1G24130 | 26.606 | 218 | 132 | 7 | 99 | 288 | 191 | 408 | 3.09e-13 | 71.2 |
| MS.gene79299.t1 | AT1G49040 | 26.820 | 261 | 172 | 7 | 89 | 341 | 888 | 1137 | 4.76e-12 | 68.6 |
| MS.gene79299.t1 | AT1G47610 | 27.103 | 214 | 131 | 6 | 99 | 288 | 134 | 346 | 2.25e-11 | 65.5 |
| MS.gene79299.t1 | AT3G50390 | 22.305 | 269 | 169 | 8 | 136 | 366 | 93 | 359 | 2.30e-11 | 65.9 |
| MS.gene79299.t1 | AT3G50390 | 27.602 | 221 | 131 | 8 | 99 | 293 | 210 | 427 | 5.21e-11 | 64.7 |
| MS.gene79299.t1 | AT3G18140 | 25.941 | 239 | 150 | 11 | 97 | 316 | 75 | 305 | 3.53e-11 | 64.3 |
| MS.gene79299.t1 | AT2G26490 | 29.464 | 224 | 122 | 10 | 99 | 293 | 205 | 421 | 4.18e-11 | 65.1 |
| MS.gene79299.t1 | AT4G15900 | 28.431 | 204 | 127 | 9 | 96 | 286 | 172 | 369 | 7.90e-11 | 64.3 |
Find 105 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCTTACCTTAACAAAAT+TGG | 0.119333 | 6.3:-56731544 | None:intergenic |
| TGGTGATGTCTGTTCTTTGC+TGG | 0.250109 | 6.3:+56732442 | MS.gene79299:CDS |
| TTTCTGCAAGAAGGGAATTC+AGG | 0.266298 | 6.3:+56734089 | MS.gene79299:CDS |
| TGCTACGGAAAGTGGAAATT+TGG | 0.270143 | 6.3:+56732593 | MS.gene79299:CDS |
| AGTGAATTGCCTACTTCTAA+TGG | 0.301502 | 6.3:+56729942 | MS.gene79299:CDS |
| CTTGCAGGATGGAGCTATAT+TGG | 0.302277 | 6.3:+56732138 | MS.gene79299:intron |
| CTTCTTACCTTAACAAAATT+GGG | 0.313002 | 6.3:-56731543 | None:intergenic |
| CGAGCCAGCTGCATCACTTA+AGG | 0.320457 | 6.3:+56732192 | MS.gene79299:CDS |
| TTTGCAGCCATTCATGCATT+AGG | 0.324789 | 6.3:+56734182 | MS.gene79299:CDS |
| GGAGCTAATAGACTTTATTC+TGG | 0.326721 | 6.3:+56732247 | MS.gene79299:CDS |
| ATTGCAAGAGCATAGAAGTA+TGG | 0.349106 | 6.3:-56733260 | None:intergenic |
| TGTCTAATGAACAAGATATA+AGG | 0.355225 | 6.3:-56732473 | None:intergenic |
| AGGGAATTCAGGGTGAAGTA+TGG | 0.357561 | 6.3:+56734100 | MS.gene79299:CDS |
| CACTCTTGGAATGTTGGTGA+TGG | 0.368628 | 6.3:+56730203 | MS.gene79299:CDS |
| TCAGCATAAGCCCGTTTAGA+AGG | 0.378915 | 6.3:-56729975 | None:intergenic |
| GGTTCGGATAAGCTTTATAC+TGG | 0.382445 | 6.3:+56731231 | MS.gene79299:CDS |
| GGTGTAAGTTTCTTCACTCT+TGG | 0.386356 | 6.3:+56730189 | MS.gene79299:CDS |
| TAGACTTTATTCTGGTTCAA+TGG | 0.390656 | 6.3:+56732255 | MS.gene79299:CDS |
| GAGCCAGCTGCATCACTTAA+GGG | 0.391704 | 6.3:+56732193 | MS.gene79299:CDS |
| ATGATGAGACTGTAAGGGTT+TGG | 0.396519 | 6.3:+56731259 | MS.gene79299:CDS |
| AGGGTTTGGGACTGCCAGTC+TGG | 0.408736 | 6.3:+56731273 | MS.gene79299:CDS |
| TGATGAGACTGTAAGGGTTT+GGG | 0.409539 | 6.3:+56731260 | MS.gene79299:CDS |
| GTAAACACTGCAAGGTTTCA+AGG | 0.414343 | 6.3:-56732395 | None:intergenic |
| ATTAATGATATGCTCTTTGC+TGG | 0.418363 | 6.3:+56731788 | MS.gene79299:CDS |
| ATTCAAGGGAATTGTAGTTA+TGG | 0.419571 | 6.3:+56730161 | MS.gene79299:intron |
| TCTTTGTTGACTCAGCTTGA+AGG | 0.427109 | 6.3:+56730230 | MS.gene79299:CDS |
| GGAATTGTAGTTATGGAGAT+AGG | 0.434741 | 6.3:+56730168 | MS.gene79299:CDS |
| GGTGATGTCTGTTCTTTGCT+GGG | 0.435801 | 6.3:+56732443 | MS.gene79299:CDS |
| TTCTGCAAGAAGGGAATTCA+GGG | 0.437130 | 6.3:+56734090 | MS.gene79299:CDS |
| GAAGTAATGATGAGACTGTA+AGG | 0.438934 | 6.3:+56731253 | MS.gene79299:CDS |
| TTTCTTCACTCTTGGAATGT+TGG | 0.440764 | 6.3:+56730197 | MS.gene79299:CDS |
| TTGGGACTGCCAGTCTGGAC+AGG | 0.443226 | 6.3:+56731278 | MS.gene79299:CDS |
| GTGAATTGCCTACTTCTAAT+GGG | 0.444534 | 6.3:+56729943 | MS.gene79299:CDS |
| AGGTAAGATATTCAACAAAC+AGG | 0.445583 | 6.3:+56733880 | MS.gene79299:CDS |
| AATTGCTATGCCCTCTGGTT+CGG | 0.446239 | 6.3:+56731215 | MS.gene79299:CDS |
| TAGGGTATAATCACCCTTTG+TGG | 0.446419 | 6.3:+56733214 | MS.gene79299:intron |
| GGAATGGTGCTCCTTCTAAA+CGG | 0.446924 | 6.3:+56729964 | MS.gene79299:CDS |
| TTCTTCACTGGTGATGGAAC+TGG | 0.448650 | 6.3:+56733938 | MS.gene79299:CDS |
| GGCAATTCACTATGCAGAAA+AGG | 0.455554 | 6.3:-56729930 | None:intergenic |
| TTCATTAGACAAAACAGTAA+AGG | 0.464680 | 6.3:+56732485 | MS.gene79299:CDS |
| CGTGTTTACAATCGTCTTGG+TGG | 0.467498 | 6.3:+56729831 | MS.gene79299:CDS |
| TCAATGGAGATAAGTCTAGA+TGG | 0.468495 | 6.3:+56731734 | MS.gene79299:CDS |
| TTGAATGAACAGGTTGTAAG+TGG | 0.476227 | 6.3:+56731192 | MS.gene79299:intron |
| GAATGGTGCTCCTTCTAAAC+GGG | 0.477698 | 6.3:+56729965 | MS.gene79299:CDS |
| TGTATAGCTGTGATCAATCT+TGG | 0.477996 | 6.3:+56731468 | MS.gene79299:CDS |
| ACTCTTGGAATGTTGGTGAT+GGG | 0.480654 | 6.3:+56730204 | MS.gene79299:CDS |
| AGTGGAATTGCTATGCCCTC+TGG | 0.484501 | 6.3:+56731210 | MS.gene79299:CDS |
| AGCATATTCTTCACTGGTGA+TGG | 0.496351 | 6.3:+56733932 | MS.gene79299:CDS |
| GGTGTTGTTTCGTTAGTTGT+TGG | 0.496526 | 6.3:+56732226 | MS.gene79299:CDS |
| CGAGCAATTCAGACTGGTCC+TGG | 0.502735 | 6.3:+56733908 | MS.gene79299:CDS |
| CCTGGTAGCATATTCTTCAC+TGG | 0.512028 | 6.3:+56733926 | MS.gene79299:CDS |
| GTGTGGTATGCTACGGAAAG+TGG | 0.514044 | 6.3:+56732585 | MS.gene79299:CDS |
| TGCATCATGCATCCCACAAA+GGG | 0.514045 | 6.3:-56733227 | None:intergenic |
| AGGGTATAATCACCCTTTGT+GGG | 0.517484 | 6.3:+56733215 | MS.gene79299:intron |
| GATTGCACCTAATGCATGAA+TGG | 0.520684 | 6.3:-56734189 | None:intergenic |
| GTATGATCAGTGAAGGTCCC+TGG | 0.528209 | 6.3:+56731505 | MS.gene79299:CDS |
| TGGACGGCTGAAGAGAATCC+AGG | 0.532464 | 6.3:-56734156 | None:intergenic |
| AAGCGTGTTTACAATCGTCT+TGG | 0.534374 | 6.3:+56729828 | MS.gene79299:CDS |
| GAGGAGAATAAATGCGAGAA+TGG | 0.535816 | 6.3:+56734131 | MS.gene79299:CDS |
| AGTGCATAAACTTGTCCGAC+AGG | 0.541835 | 6.3:-56731758 | None:intergenic |
| TTGGAACACGCAAAATTCAA+TGG | 0.543770 | 6.3:+56731718 | MS.gene79299:CDS |
| TTTGTTTCTATGGATTTCGA+CGG | 0.545744 | 6.3:+56729798 | None:intergenic |
| GCATGAATGGCTGCAAAGGA+TGG | 0.548199 | 6.3:-56734176 | None:intergenic |
| ATTCTTTGAATCACCACCGT+TGG | 0.549048 | 6.3:-56729856 | None:intergenic |
| TCAGCTTGAAGGACATAAGA+AGG | 0.550026 | 6.3:+56730241 | MS.gene79299:CDS |
| TTGTAACAACCTGTCCAGAC+TGG | 0.550382 | 6.3:-56731287 | None:intergenic |
| TTGCAAGAGCATAGAAGTAT+GGG | 0.552250 | 6.3:-56733259 | None:intergenic |
| ACTGACAGAGCACACGGCTG+TGG | 0.553338 | 6.3:+56732422 | MS.gene79299:CDS |
| AATCGTCTTGGTGGGTCCAA+CGG | 0.554468 | 6.3:+56729840 | MS.gene79299:CDS |
| TATGCTCTTTGCTGGTACGC+AGG | 0.562187 | 6.3:+56731796 | MS.gene79299:CDS |
| GCACCATTCCCATTAGAAGT+AGG | 0.568465 | 6.3:-56729951 | None:intergenic |
| GTGTTTACAATCGTCTTGGT+GGG | 0.570120 | 6.3:+56729832 | MS.gene79299:CDS |
| TTGTTCAGATTTGCAGAGAG+AGG | 0.570280 | 6.3:+56733860 | MS.gene79299:intron |
| GTTTCTATGGATTTCGACGG+TGG | 0.572025 | 6.3:+56729801 | None:intergenic |
| AACTAACGAAACAACACCAC+GGG | 0.575189 | 6.3:-56732221 | None:intergenic |
| ATAAATGCGAGAATGGAACC+TGG | 0.576578 | 6.3:+56734138 | MS.gene79299:CDS |
| ATCAATCTTGGCGGTGAAGT+AGG | 0.580144 | 6.3:+56731480 | MS.gene79299:CDS |
| TATGCAGGTGTGGTATGCTA+CGG | 0.582090 | 6.3:+56732578 | MS.gene79299:intron |
| ATAAAGCTTATCCGAACCAG+AGG | 0.585965 | 6.3:-56731226 | None:intergenic |
| TTGCCTACTTCTAATGGGAA+TGG | 0.590538 | 6.3:+56729948 | MS.gene79299:CDS |
| CAGTGTCTGTAAACACTGCA+AGG | 0.596655 | 6.3:-56732403 | None:intergenic |
| TAATGCATGAATGGCTGCAA+AGG | 0.596923 | 6.3:-56734180 | None:intergenic |
| TGCAGCTGGCTCGAAACAGT+TGG | 0.597581 | 6.3:-56732182 | None:intergenic |
| TGACCCTTAAGTGATGCAGC+TGG | 0.606030 | 6.3:-56732196 | None:intergenic |
| CTTACGACGGCAGATCATAG+AGG | 0.618066 | 6.3:-56733297 | None:intergenic |
| CCAGTGAAGAATATGCTACC+AGG | 0.618179 | 6.3:-56733926 | None:intergenic |
| AGGATGGAGCTATATTGGTA+TGG | 0.618970 | 6.3:+56732143 | MS.gene79299:intron |
| TCACTATGCAGAAAAGGACA+TGG | 0.619738 | 6.3:-56729924 | None:intergenic |
| CGTCTTGGTGGGTCCAACGG+TGG | 0.620014 | 6.3:+56729843 | MS.gene79299:CDS |
| GTGCATCATGCATCCCACAA+AGG | 0.625754 | 6.3:-56733228 | None:intergenic |
| GAATGGCTGCAAAGGATGGA+CGG | 0.626093 | 6.3:-56734172 | None:intergenic |
| ATAAGTCTAGATGGCCCTGT+CGG | 0.630869 | 6.3:+56731743 | MS.gene79299:CDS |
| GTAGGTTGTATGATCAGTGA+AGG | 0.632803 | 6.3:+56731498 | MS.gene79299:CDS |
| AAGTAATGATGAGACTGTAA+GGG | 0.635516 | 6.3:+56731254 | MS.gene79299:CDS |
| GAGGTGCGAGCAATTCAGAC+TGG | 0.636091 | 6.3:+56733902 | MS.gene79299:CDS |
| GTGCATAAACTTGTCCGACA+GGG | 0.646937 | 6.3:-56731757 | None:intergenic |
| ATAGCTGTGATCAATCTTGG+CGG | 0.647484 | 6.3:+56731471 | MS.gene79299:CDS |
| ACAGACACTGACAGAGCACA+CGG | 0.654604 | 6.3:+56732416 | MS.gene79299:CDS |
| TCACTTAAGGGTCATACCCG+TGG | 0.658682 | 6.3:+56732205 | MS.gene79299:CDS |
| TAAGATATTCAACAAACAGG+AGG | 0.665359 | 6.3:+56733883 | MS.gene79299:CDS |
| TCAGGGTGAAGTATGGATTG+CGG | 0.671131 | 6.3:+56734107 | MS.gene79299:CDS |
| GTGAAGTATGGATTGCGGAG+AGG | 0.680932 | 6.3:+56734112 | MS.gene79299:CDS |
| TGTGGGATGCATGATGCACA+AGG | 0.684145 | 6.3:+56733232 | MS.gene79299:CDS |
| TAAAGCTTATCCGAACCAGA+GGG | 0.687572 | 6.3:-56731225 | None:intergenic |
| CAACTAACGAAACAACACCA+CGG | 0.703335 | 6.3:-56732222 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAAGATTATTATTTTTAAAT+AGG | + | chr6.3:56732889-56732908 | MS.gene79299:intron | 10.0% |
| !!! | TTTAAGTTATTAATATACTA+TGG | + | chr6.3:56730764-56730783 | MS.gene79299:intron | 10.0% |
| !! | TGTAAAAATAAAAATCTTTC+TGG | - | chr6.3:56733077-56733096 | None:intergenic | 15.0% |
| !!! | AATATTCTTTTTAAGCAAAA+TGG | + | chr6.3:56732320-56732339 | MS.gene79299:intron | 15.0% |
| !!! | CTTATATATAACTATACTTT+TGG | + | chr6.3:56730604-56730623 | MS.gene79299:intron | 15.0% |
| !!! | TTTAATGGAAATTTTATATG+TGG | - | chr6.3:56732755-56732774 | None:intergenic | 15.0% |
| !! | AAAATAAAATACGTTGACAA+TGG | - | chr6.3:56731836-56731855 | None:intergenic | 20.0% |
| !! | AAACTGCTAAAACAATTAAT+TGG | - | chr6.3:56734046-56734065 | None:intergenic | 20.0% |
| !! | AAATCATAACAATCAAAACA+AGG | - | chr6.3:56732559-56732578 | None:intergenic | 20.0% |
| !! | AATCATAACAATCAAAACAA+GGG | - | chr6.3:56732558-56732577 | None:intergenic | 20.0% |
| !! | ATATTAAGCATTAAGCATAT+AGG | - | chr6.3:56731060-56731079 | None:intergenic | 20.0% |
| !! | CTTCAACTCTAATTTATTTA+AGG | + | chr6.3:56731613-56731632 | MS.gene79299:intron | 20.0% |
| !! | TATAAGCATATAAGTACATT+TGG | - | chr6.3:56730590-56730609 | None:intergenic | 20.0% |
| !! | TATTAAGCATTAAGCATATA+GGG | - | chr6.3:56731059-56731078 | None:intergenic | 20.0% |
| !! | TTCATTCATTTGTATTTGTT+TGG | + | chr6.3:56733367-56733386 | MS.gene79299:intron | 20.0% |
| !! | TTGCAGAAAAAATTACAAAA+AGG | - | chr6.3:56734078-56734097 | None:intergenic | 20.0% |
| !! | TTGTTACAATTTCTTTCTAT+TGG | + | chr6.3:56731301-56731320 | MS.gene79299:intron | 20.0% |
| !! | TTTATATACCTATTTCAATG+CGG | + | chr6.3:56731871-56731890 | MS.gene79299:intron | 20.0% |
| !!! | AAAAACTGAGTTGATAAAAT+AGG | - | chr6.3:56733757-56733776 | None:intergenic | 20.0% |
| !!! | AAATTTTCAAACATCTCATA+AGG | - | chr6.3:56732954-56732973 | None:intergenic | 20.0% |
| !!! | AATTTTCAAACATCTCATAA+GGG | - | chr6.3:56732953-56732972 | None:intergenic | 20.0% |
| !!! | GTATTGTCTTTTTTTTAATG+TGG | + | chr6.3:56733022-56733041 | MS.gene79299:intron | 20.0% |
| !!! | TAAGCTTTTTTTATAGCAAA+AGG | + | chr6.3:56730855-56730874 | MS.gene79299:intron | 20.0% |
| !!! | TTTTGAATTATGGTTTTGAA+TGG | + | chr6.3:56730425-56730444 | MS.gene79299:intron | 20.0% |
| ! | AAAGTTATTCATGGCAAAAA+TGG | + | chr6.3:56733418-56733437 | MS.gene79299:intron | 25.0% |
| ! | AATAAGTTGTTTATCCAAAC+AGG | - | chr6.3:56730791-56730810 | None:intergenic | 25.0% |
| ! | AATTATTTGAGCTTATCTAC+TGG | - | chr6.3:56731023-56731042 | None:intergenic | 25.0% |
| ! | ATAAGTTGTTTATCCAAACA+GGG | - | chr6.3:56730790-56730809 | None:intergenic | 25.0% |
| ! | ATCATAACAATCAAAACAAG+GGG | - | chr6.3:56732557-56732576 | None:intergenic | 25.0% |
| ! | ATTAAGCATTAAGCATATAG+GGG | - | chr6.3:56731058-56731077 | None:intergenic | 25.0% |
| ! | CTTCTTACCTTAACAAAATT+GGG | - | chr6.3:56731546-56731565 | None:intergenic | 25.0% |
| ! | GAAATAGAAAACAGATAGAA+AGG | - | chr6.3:56731350-56731369 | None:intergenic | 25.0% |
| ! | TAGCAATTCTATAACATATC+CGG | - | chr6.3:56730458-56730477 | None:intergenic | 25.0% |
| ! | TATATTTCCCAATATCCTAA+AGG | - | chr6.3:56732033-56732052 | None:intergenic | 25.0% |
| ! | TCAATTGTCAAATGTTAAAG+AGG | + | chr6.3:56730670-56730689 | MS.gene79299:intron | 25.0% |
| ! | TCATACACGTAATTAATTTC+CGG | - | chr6.3:56731128-56731147 | None:intergenic | 25.0% |
| ! | TCTTCTTACCTTAACAAAAT+TGG | - | chr6.3:56731547-56731566 | None:intergenic | 25.0% |
| ! | TGAAATACCAACATTTCTAA+TGG | - | chr6.3:56732713-56732732 | None:intergenic | 25.0% |
| ! | TGTCTAATGAACAAGATATA+AGG | - | chr6.3:56732476-56732495 | None:intergenic | 25.0% |
| ! | TTACTGTACAAAGTTATTCA+TGG | + | chr6.3:56733409-56733428 | MS.gene79299:intron | 25.0% |
| ! | TTCATTAGACAAAACAGTAA+AGG | + | chr6.3:56732485-56732504 | MS.gene79299:CDS | 25.0% |
| ! | TTCTACACAAAATGTTGTAT+TGG | + | chr6.3:56733134-56733153 | MS.gene79299:intron | 25.0% |
| ! | TTGAAAGAGTTTGTACTTAT+TGG | + | chr6.3:56730138-56730157 | MS.gene79299:intron | 25.0% |
| ! | TTGATTGTTATGATTTATGC+AGG | + | chr6.3:56732563-56732582 | MS.gene79299:intron | 25.0% |
| ! | TTTGTACTTATTGGATTCAA+GGG | + | chr6.3:56730147-56730166 | MS.gene79299:intron | 25.0% |
| !! | AATTTATTTATGTTTTCCCC+TGG | + | chr6.3:56732654-56732673 | MS.gene79299:intron | 25.0% |
| !! | ATTTTCAAACATCTCATAAG+GGG | - | chr6.3:56732952-56732971 | None:intergenic | 25.0% |
| !! | GTTGGTATTTCATGATTTTA+GGG | + | chr6.3:56732721-56732740 | MS.gene79299:intron | 25.0% |
| !! | TGTTGGTATTTCATGATTTT+AGG | + | chr6.3:56732720-56732739 | MS.gene79299:intron | 25.0% |
| !! | TTGGTTCTTAGATCATTTAA+TGG | - | chr6.3:56732770-56732789 | None:intergenic | 25.0% |
| !!! | AACACAACAATTTAGTTCTT+TGG | - | chr6.3:56731432-56731451 | None:intergenic | 25.0% |
| !!! | AATCTTGATAGTGAAATCTA+TGG | + | chr6.3:56730311-56730330 | MS.gene79299:intron | 25.0% |
| !!! | ACTTTTGGTTATGTTTTGAA+TGG | + | chr6.3:56730619-56730638 | MS.gene79299:intron | 25.0% |
| !!! | GTTTGTTTTTCATTATTTGC+AGG | + | chr6.3:56732507-56732526 | MS.gene79299:intron | 25.0% |
| !!! | TGTAATTTTTTCTGCAAGAA+GGG | + | chr6.3:56734081-56734100 | MS.gene79299:CDS | 25.0% |
| !!! | TGTATTGGTATTTGTTATAG+TGG | + | chr6.3:56733149-56733168 | MS.gene79299:intron | 25.0% |
| !!! | TTGTAATTTTTTCTGCAAGA+AGG | + | chr6.3:56734080-56734099 | MS.gene79299:CDS | 25.0% |
| !!! | TTTTTAAGCAAAATGGAACT+AGG | + | chr6.3:56732327-56732346 | MS.gene79299:intron | 25.0% |
| AAACTATGGTTTATGCCTTT+AGG | + | chr6.3:56732015-56732034 | MS.gene79299:intron | 30.0% | |
| AAGTAATGATGAGACTGTAA+GGG | + | chr6.3:56731254-56731273 | MS.gene79299:CDS | 30.0% | |
| AAGTTAAGAATGAGTCACAA+TGG | - | chr6.3:56733827-56733846 | None:intergenic | 30.0% | |
| AATGCCACATTATATTGTGA+AGG | - | chr6.3:56733733-56733752 | None:intergenic | 30.0% | |
| AGGTAAGATATTCAACAAAC+AGG | + | chr6.3:56733880-56733899 | MS.gene79299:CDS | 30.0% | |
| ATATGTAACAAGAGCAAGAA+TGG | - | chr6.3:56733334-56733353 | None:intergenic | 30.0% | |
| ATTAATGATATGCTCTTTGC+TGG | + | chr6.3:56731788-56731807 | MS.gene79299:CDS | 30.0% | |
| ATTCAAGGGAATTGTAGTTA+TGG | + | chr6.3:56730161-56730180 | MS.gene79299:intron | 30.0% | |
| CACAATACACTATTAGTACA+AGG | + | chr6.3:56733593-56733612 | MS.gene79299:intron | 30.0% | |
| CATACACGTAATTAATTTCC+GGG | - | chr6.3:56731127-56731146 | None:intergenic | 30.0% | |
| CATTATTTCCGCATTGAAAT+AGG | - | chr6.3:56731882-56731901 | None:intergenic | 30.0% | |
| CTTGCTCTTGTTACATATTA+TGG | + | chr6.3:56733336-56733355 | MS.gene79299:intron | 30.0% | |
| CTTGTACTAATAGTGTATTG+TGG | - | chr6.3:56733595-56733614 | None:intergenic | 30.0% | |
| GTTCTTTAATAGCAGCAATA+GGG | + | chr6.3:56733617-56733636 | MS.gene79299:intron | 30.0% | |
| GTTTGTACTTATTGGATTCA+AGG | + | chr6.3:56730146-56730165 | MS.gene79299:intron | 30.0% | |
| TAAAATACGTTGACAATGGA+AGG | - | chr6.3:56731832-56731851 | None:intergenic | 30.0% | |
| TAAGATATTCAACAAACAGG+AGG | + | chr6.3:56733883-56733902 | MS.gene79299:CDS | 30.0% | |
| TATGTAACAAGAGCAAGAAT+GGG | - | chr6.3:56733333-56733352 | None:intergenic | 30.0% | |
| TCAAAAAGATGTTCACATAG+TGG | + | chr6.3:56731914-56731933 | MS.gene79299:intron | 30.0% | |
| TCATAACAATCAAAACAAGG+GGG | - | chr6.3:56732556-56732575 | None:intergenic | 30.0% | |
| TCATATGAGTTCAGTTCATT+AGG | - | chr6.3:56732793-56732812 | None:intergenic | 30.0% | |
| TCATTGAAAATGATCATGCA+GGG | - | chr6.3:56733002-56733021 | None:intergenic | 30.0% | |
| TCTTGTTCCATTAGAAATGT+TGG | + | chr6.3:56732703-56732722 | MS.gene79299:intron | 30.0% | |
| TGAAGAACTGCAGATTAAAA+TGG | - | chr6.3:56733464-56733483 | None:intergenic | 30.0% | |
| TGAGAATAGCTAATGAACAA+TGG | + | chr6.3:56730949-56730968 | MS.gene79299:intron | 30.0% | |
| TGATCCTTCACAATATAATG+TGG | + | chr6.3:56733726-56733745 | MS.gene79299:intron | 30.0% | |
| TGTTCTTTAATAGCAGCAAT+AGG | + | chr6.3:56733616-56733635 | MS.gene79299:intron | 30.0% | |
| TTTATTAGTGTTGTCAATCG+AGG | - | chr6.3:56733695-56733714 | None:intergenic | 30.0% | |
| TTTGGTATACAAAACAAGCT+TGG | + | chr6.3:56733385-56733404 | MS.gene79299:intron | 30.0% | |
| ! | ATGTTAGTAAGTGATGGAAT+TGG | + | chr6.3:56730696-56730715 | MS.gene79299:intron | 30.0% |
| ! | GAATGTGTTGATCTTATGTA+TGG | + | chr6.3:56732676-56732695 | MS.gene79299:intron | 30.0% |
| ! | GTGACTCATTCTTAACTTTT+TGG | + | chr6.3:56733829-56733848 | MS.gene79299:intron | 30.0% |
| ! | TTCTTTGGCTTAATCTCAAA+AGG | - | chr6.3:56731417-56731436 | None:intergenic | 30.0% |
| !! | AAGTACATTTGGTGTTTGTA+TGG | - | chr6.3:56730579-56730598 | None:intergenic | 30.0% |
| !! | AGTACATTTGGTGTTTGTAT+GGG | - | chr6.3:56730578-56730597 | None:intergenic | 30.0% |
| !! | ATCAGAAAGTGTGTTTTCAA+TGG | + | chr6.3:56729877-56729896 | MS.gene79299:CDS | 30.0% |
| !! | ATTCGAGTTTTTCTGGTAAT+CGG | + | chr6.3:56730000-56730019 | MS.gene79299:intron | 30.0% |
| !! | GTTTATGCCTTTAGGATATT+GGG | + | chr6.3:56732023-56732042 | MS.gene79299:intron | 30.0% |
| !! | TAGACTTTATTCTGGTTCAA+TGG | + | chr6.3:56732255-56732274 | MS.gene79299:CDS | 30.0% |
| !! | TTTGGTTATGTTTTGAATGG+TGG | + | chr6.3:56730622-56730641 | MS.gene79299:intron | 30.0% |
| !!! | TGAATTATGGTTTTGAATGG+TGG | + | chr6.3:56730428-56730447 | MS.gene79299:intron | 30.0% |
| !!! | TTTTTGGGTAATGAGTTGAT+GGG | + | chr6.3:56731153-56731172 | MS.gene79299:intron | 30.0% |
| !!! | TTTTTTGGGTAATGAGTTGA+TGG | + | chr6.3:56731152-56731171 | MS.gene79299:intron | 30.0% |
| ACATAAGATCAACACATTCC+AGG | - | chr6.3:56732675-56732694 | None:intergenic | 35.0% | |
| ACCAAACAGGATATCAGTTA+CGG | - | chr6.3:56731677-56731696 | None:intergenic | 35.0% | |
| AGGCAAATGTTAGTAAGTGA+TGG | + | chr6.3:56730690-56730709 | MS.gene79299:intron | 35.0% | |
| AGTGAATTGCCTACTTCTAA+TGG | + | chr6.3:56729942-56729961 | MS.gene79299:CDS | 35.0% | |
| ATAAGATCAACACATTCCAG+GGG | - | chr6.3:56732673-56732692 | None:intergenic | 35.0% | |
| ATCAATGAGAACAACCAAAC+AGG | - | chr6.3:56731690-56731709 | None:intergenic | 35.0% | |
| ATGAGTTCAGTTCATTAGGT+TGG | - | chr6.3:56732789-56732808 | None:intergenic | 35.0% | |
| CATAAGATCAACACATTCCA+GGG | - | chr6.3:56732674-56732693 | None:intergenic | 35.0% | |
| CATTGAAAATGATCATGCAG+GGG | - | chr6.3:56733001-56733020 | None:intergenic | 35.0% | |
| CCAATAACGTGCAATAAAGT+GGG | + | chr6.3:56734002-56734021 | MS.gene79299:intron | 35.0% | |
| CTCATTGAAAATGATCATGC+AGG | - | chr6.3:56733003-56733022 | None:intergenic | 35.0% | |
| GAAGTAATGATGAGACTGTA+AGG | + | chr6.3:56731253-56731272 | MS.gene79299:CDS | 35.0% | |
| GATGTTATGATCTGCTTGTA+GGG | + | chr6.3:56733196-56733215 | MS.gene79299:intron | 35.0% | |
| GATTTATTAAGCGCGTCTAT+TGG | + | chr6.3:56731081-56731100 | MS.gene79299:intron | 35.0% | |
| GGAATTGTAGTTATGGAGAT+AGG | + | chr6.3:56730168-56730187 | MS.gene79299:CDS | 35.0% | |
| GGAGCTAATAGACTTTATTC+TGG | + | chr6.3:56732247-56732266 | MS.gene79299:CDS | 35.0% | |
| GTGAATTGCCTACTTCTAAT+GGG | + | chr6.3:56729943-56729962 | MS.gene79299:CDS | 35.0% | |
| TAATATACTATGGCCCTGTT+TGG | + | chr6.3:56730774-56730793 | MS.gene79299:intron | 35.0% | |
| TATTTGACAACACTACATGG+AGG | - | chr6.3:56733520-56733539 | None:intergenic | 35.0% | |
| TCAATGGAGATAAGTCTAGA+TGG | + | chr6.3:56731734-56731753 | MS.gene79299:CDS | 35.0% | |
| TCCAATAACGTGCAATAAAG+TGG | + | chr6.3:56734001-56734020 | MS.gene79299:intron | 35.0% | |
| TGATGTTATGATCTGCTTGT+AGG | + | chr6.3:56733195-56733214 | MS.gene79299:intron | 35.0% | |
| TGTATAGCTGTGATCAATCT+TGG | + | chr6.3:56731468-56731487 | MS.gene79299:CDS | 35.0% | |
| TGTTATGATTTATGCAGGTG+TGG | + | chr6.3:56732568-56732587 | MS.gene79299:intron | 35.0% | |
| TTATTGCACGTTATTGGATG+TGG | - | chr6.3:56733999-56734018 | None:intergenic | 35.0% | |
| TTGAATGAACAGGTTGTAAG+TGG | + | chr6.3:56731192-56731211 | MS.gene79299:intron | 35.0% | |
| TTGGAACACGCAAAATTCAA+TGG | + | chr6.3:56731718-56731737 | MS.gene79299:CDS | 35.0% | |
| TTTAATAGCAGCAATAGGGT+TGG | + | chr6.3:56733621-56733640 | MS.gene79299:intron | 35.0% | |
| TTTCTTCACTCTTGGAATGT+TGG | + | chr6.3:56730197-56730216 | MS.gene79299:CDS | 35.0% | |
| ! | ATTGCAAGAGCATAGAAGTA+TGG | - | chr6.3:56733263-56733282 | None:intergenic | 35.0% |
| ! | CATGGACTATAGAAGTTTGT+TGG | - | chr6.3:56733670-56733689 | None:intergenic | 35.0% |
| ! | CTATCTGGGATTGAAAACTA+TGG | + | chr6.3:56732001-56732020 | MS.gene79299:intron | 35.0% |
| ! | TAGTTTTCAATCCCAGATAG+TGG | - | chr6.3:56732001-56732020 | None:intergenic | 35.0% |
| ! | TGCTATTTGACAACACTACA+TGG | - | chr6.3:56733523-56733542 | None:intergenic | 35.0% |
| ! | TGGCATACCCAATTTTGTTA+AGG | + | chr6.3:56731536-56731555 | MS.gene79299:CDS | 35.0% |
| ! | TTGCAAGAGCATAGAAGTAT+GGG | - | chr6.3:56733262-56733281 | None:intergenic | 35.0% |
| ! | TTTGGTTTCGTTGAATGAAC+AGG | + | chr6.3:56731182-56731201 | MS.gene79299:intron | 35.0% |
| !! | GCTGATAATTCGAGTTTTTC+TGG | + | chr6.3:56729993-56730012 | MS.gene79299:CDS | 35.0% |
| !! | GGTTTATGCCTTTAGGATAT+TGG | + | chr6.3:56732022-56732041 | MS.gene79299:intron | 35.0% |
| !! | TATTTGTTATAGTGGTGACG+TGG | + | chr6.3:56733157-56733176 | MS.gene79299:intron | 35.0% |
| !!! | ACGTGTATGAGTGCTTTTTT+GGG | + | chr6.3:56731138-56731157 | MS.gene79299:intron | 35.0% |
| !!! | GGTTGTTCTCATTGATTTTC+AGG | + | chr6.3:56731694-56731713 | MS.gene79299:intron | 35.0% |
| !!! | TACGTGTATGAGTGCTTTTT+TGG | + | chr6.3:56731137-56731156 | MS.gene79299:intron | 35.0% |
| !!! | TGGATCGAGTTTTAATTCGT+GGG | + | chr6.3:56730028-56730047 | MS.gene79299:intron | 35.0% |
| !!! | TTCTCATTGATTTTCAGGCT+TGG | + | chr6.3:56731699-56731718 | MS.gene79299:intron | 35.0% |
| AAACAAGTTGCGCCATTCAT+GGG | - | chr6.3:56730520-56730539 | None:intergenic | 40.0% | |
| AACTAACGAAACAACACCAC+GGG | - | chr6.3:56732224-56732243 | None:intergenic | 40.0% | |
| AAGAATGAGTCACAATGGTC+AGG | - | chr6.3:56733822-56733841 | None:intergenic | 40.0% | |
| AAGCGTGTTTACAATCGTCT+TGG | + | chr6.3:56729828-56729847 | MS.gene79299:CDS | 40.0% | |
| ACCGTAACTGATATCCTGTT+TGG | + | chr6.3:56731673-56731692 | MS.gene79299:intron | 40.0% | |
| ACGTGTGTACATAAACTCGA+CGG | - | chr6.3:56730352-56730371 | None:intergenic | 40.0% | |
| AGAATGAGTCACAATGGTCA+GGG | - | chr6.3:56733821-56733840 | None:intergenic | 40.0% | |
| AGCATATTCTTCACTGGTGA+TGG | + | chr6.3:56733932-56733951 | MS.gene79299:CDS | 40.0% | |
| AGGATGGAGCTATATTGGTA+TGG | + | chr6.3:56732143-56732162 | MS.gene79299:intron | 40.0% | |
| AGGGTATAATCACCCTTTGT+GGG | + | chr6.3:56733215-56733234 | MS.gene79299:intron | 40.0% | |
| ATAAAGCTTATCCGAACCAG+AGG | - | chr6.3:56731229-56731248 | None:intergenic | 40.0% | |
| ATAAATGCGAGAATGGAACC+TGG | + | chr6.3:56734138-56734157 | MS.gene79299:CDS | 40.0% | |
| ATAACGTGCAATAAAGTGGG+AGG | + | chr6.3:56734005-56734024 | MS.gene79299:intron | 40.0% | |
| ATAGCTGTGATCAATCTTGG+CGG | + | chr6.3:56731471-56731490 | MS.gene79299:CDS | 40.0% | |
| ATGATGAGACTGTAAGGGTT+TGG | + | chr6.3:56731259-56731278 | MS.gene79299:CDS | 40.0% | |
| ATTCTTTGAATCACCACCGT+TGG | - | chr6.3:56729859-56729878 | None:intergenic | 40.0% | |
| CAACTAACGAAACAACACCA+CGG | - | chr6.3:56732225-56732244 | None:intergenic | 40.0% | |
| CCCACTTTATTGCACGTTAT+TGG | - | chr6.3:56734005-56734024 | None:intergenic | 40.0% | |
| CTCTGAACCTAAAACTGGAA+TGG | - | chr6.3:56731968-56731987 | None:intergenic | 40.0% | |
| GAGGAGAATAAATGCGAGAA+TGG | + | chr6.3:56734131-56734150 | MS.gene79299:CDS | 40.0% | |
| GATAGTGTGAAACCCATGAA+TGG | + | chr6.3:56730505-56730524 | MS.gene79299:intron | 40.0% | |
| GGCAATTCACTATGCAGAAA+AGG | - | chr6.3:56729933-56729952 | None:intergenic | 40.0% | |
| GGGAAATCAACTACTTACGA+CGG | - | chr6.3:56733313-56733332 | None:intergenic | 40.0% | |
| GGTGTAAGTTTCTTCACTCT+TGG | + | chr6.3:56730189-56730208 | MS.gene79299:CDS | 40.0% | |
| GTAAACACTGCAAGGTTTCA+AGG | - | chr6.3:56732398-56732417 | None:intergenic | 40.0% | |
| GTAGGTTGTATGATCAGTGA+AGG | + | chr6.3:56731498-56731517 | MS.gene79299:CDS | 40.0% | |
| GTGTTGTCAAATAGCAGCTA+TGG | + | chr6.3:56733527-56733546 | MS.gene79299:intron | 40.0% | |
| GTGTTTACAATCGTCTTGGT+GGG | + | chr6.3:56729832-56729851 | MS.gene79299:CDS | 40.0% | |
| TAAAACTGGAATGGCAGGAT+AGG | - | chr6.3:56731959-56731978 | None:intergenic | 40.0% | |
| TAAACAAGTTGCGCCATTCA+TGG | - | chr6.3:56730521-56730540 | None:intergenic | 40.0% | |
| TAAAGCTTATCCGAACCAGA+GGG | - | chr6.3:56731228-56731247 | None:intergenic | 40.0% | |
| TAATGCATGAATGGCTGCAA+AGG | - | chr6.3:56734183-56734202 | None:intergenic | 40.0% | |
| TACACCTACAATTCTCTTGC+AGG | + | chr6.3:56732123-56732142 | MS.gene79299:intron | 40.0% | |
| TAGGATAGTGTGAGATGGAA+TGG | - | chr6.3:56731940-56731959 | None:intergenic | 40.0% | |
| TAGGGTATAATCACCCTTTG+TGG | + | chr6.3:56733214-56733233 | MS.gene79299:intron | 40.0% | |
| TATTAAGCGCGTCTATTGGT+AGG | + | chr6.3:56731085-56731104 | MS.gene79299:intron | 40.0% | |
| TCACTATGCAGAAAAGGACA+TGG | - | chr6.3:56729927-56729946 | None:intergenic | 40.0% | |
| TCAGCTTGAAGGACATAAGA+AGG | + | chr6.3:56730241-56730260 | MS.gene79299:CDS | 40.0% | |
| TCCACACCTGAAAGAAACAA+CGG | - | chr6.3:56732374-56732393 | None:intergenic | 40.0% | |
| TGATGAGACTGTAAGGGTTT+GGG | + | chr6.3:56731260-56731279 | MS.gene79299:CDS | 40.0% | |
| TGCTACGGAAAGTGGAAATT+TGG | + | chr6.3:56732593-56732612 | MS.gene79299:CDS | 40.0% | |
| TTCTGCAAGAAGGGAATTCA+GGG | + | chr6.3:56734090-56734109 | MS.gene79299:CDS | 40.0% | |
| TTGCCTACTTCTAATGGGAA+TGG | + | chr6.3:56729948-56729967 | MS.gene79299:CDS | 40.0% | |
| TTGTTCAGATTTGCAGAGAG+AGG | + | chr6.3:56733860-56733879 | MS.gene79299:intron | 40.0% | |
| TTTCTGCAAGAAGGGAATTC+AGG | + | chr6.3:56734089-56734108 | MS.gene79299:CDS | 40.0% | |
| ! | ATGGCGCAACTTGTTTATCA+TGG | + | chr6.3:56730524-56730543 | MS.gene79299:intron | 40.0% |
| ! | GGTTCGGATAAGCTTTATAC+TGG | + | chr6.3:56731231-56731250 | MS.gene79299:CDS | 40.0% |
| ! | TATCCTGCCATTCCAGTTTT+AGG | + | chr6.3:56731958-56731977 | MS.gene79299:intron | 40.0% |
| !! | ACTCTTGGAATGTTGGTGAT+GGG | + | chr6.3:56730204-56730223 | MS.gene79299:CDS | 40.0% |
| !! | GGTGTTGTTTCGTTAGTTGT+TGG | + | chr6.3:56732226-56732245 | MS.gene79299:CDS | 40.0% |
| !! | TCTTTGTTGACTCAGCTTGA+AGG | + | chr6.3:56730230-56730249 | MS.gene79299:CDS | 40.0% |
| !! | TTCCATCCGTTGTTTCTTTC+AGG | + | chr6.3:56732365-56732384 | MS.gene79299:intron | 40.0% |
| !!! | GATCGAGTTTTAATTCGTGG+GGG | + | chr6.3:56730030-56730049 | MS.gene79299:intron | 40.0% |
| !!! | GGATCGAGTTTTAATTCGTG+GGG | + | chr6.3:56730029-56730048 | MS.gene79299:intron | 40.0% |
| !!! | GGTTTTGAATGGTGGATAAC+CGG | + | chr6.3:56730436-56730455 | MS.gene79299:intron | 40.0% |
| !!! | GTGGATCGAGTTTTAATTCG+TGG | + | chr6.3:56730027-56730046 | MS.gene79299:intron | 40.0% |
| !!! | TGAGTTGATGGGATGAGTTT+TGG | + | chr6.3:56731164-56731183 | MS.gene79299:intron | 40.0% |
| AAACTCGACGGCAAACATGT+TGG | - | chr6.3:56730340-56730359 | None:intergenic | 45.0% | |
| AAATGATCATGCAGGGGATC+AGG | - | chr6.3:56732995-56733014 | None:intergenic | 45.0% | |
| AATGATCATGCAGGGGATCA+GGG | - | chr6.3:56732994-56733013 | None:intergenic | 45.0% | |
| AATTGCTATGCCCTCTGGTT+CGG | + | chr6.3:56731215-56731234 | MS.gene79299:CDS | 45.0% | |
| AGGGAATTCAGGGTGAAGTA+TGG | + | chr6.3:56734100-56734119 | MS.gene79299:CDS | 45.0% | |
| AGTGCATAAACTTGTCCGAC+AGG | - | chr6.3:56731761-56731780 | None:intergenic | 45.0% | |
| ATAAGTCTAGATGGCCCTGT+CGG | + | chr6.3:56731743-56731762 | MS.gene79299:CDS | 45.0% | |
| ATCAATCTTGGCGGTGAAGT+AGG | + | chr6.3:56731480-56731499 | MS.gene79299:CDS | 45.0% | |
| CACCTGAAAGAAACAACGGA+TGG | - | chr6.3:56732370-56732389 | None:intergenic | 45.0% | |
| CAGGATAGGATAGTGTGAGA+TGG | - | chr6.3:56731945-56731964 | None:intergenic | 45.0% | |
| CAGTGTCTGTAAACACTGCA+AGG | - | chr6.3:56732406-56732425 | None:intergenic | 45.0% | |
| CCAGTGAAGAATATGCTACC+AGG | - | chr6.3:56733929-56733948 | None:intergenic | 45.0% | |
| CCATCCTGCAAGAGAATTGT+AGG | - | chr6.3:56732130-56732149 | None:intergenic | 45.0% | |
| CCTACAATTCTCTTGCAGGA+TGG | + | chr6.3:56732127-56732146 | MS.gene79299:intron | 45.0% | |
| CCTGGTAGCATATTCTTCAC+TGG | + | chr6.3:56733926-56733945 | MS.gene79299:CDS | 45.0% | |
| CGTGTTTACAATCGTCTTGG+TGG | + | chr6.3:56729831-56729850 | MS.gene79299:CDS | 45.0% | |
| CTTGCAGGATGGAGCTATAT+TGG | + | chr6.3:56732138-56732157 | MS.gene79299:intron | 45.0% | |
| GAACCTAAAACTGGAATGGC+AGG | - | chr6.3:56731964-56731983 | None:intergenic | 45.0% | |
| GAATGGTGCTCCTTCTAAAC+GGG | + | chr6.3:56729965-56729984 | MS.gene79299:CDS | 45.0% | |
| GCACCATTCCCATTAGAAGT+AGG | - | chr6.3:56729954-56729973 | None:intergenic | 45.0% | |
| GGAATGGTGCTCCTTCTAAA+CGG | + | chr6.3:56729964-56729983 | MS.gene79299:CDS | 45.0% | |
| GGTATGCCAACAAAAAGCCA+GGG | - | chr6.3:56731525-56731544 | None:intergenic | 45.0% | |
| GGTGATGTCTGTTCTTTGCT+GGG | + | chr6.3:56732443-56732462 | MS.gene79299:CDS | 45.0% | |
| GTGCATAAACTTGTCCGACA+GGG | - | chr6.3:56731760-56731779 | None:intergenic | 45.0% | |
| GTGGAATTGGATACCTGAAC+CGG | + | chr6.3:56733973-56733992 | MS.gene79299:intron | 45.0% | |
| GTGTTGTCAATCGAGGATCA+TGG | - | chr6.3:56733688-56733707 | None:intergenic | 45.0% | |
| TATGCAGGTGTGGTATGCTA+CGG | + | chr6.3:56732578-56732597 | MS.gene79299:intron | 45.0% | |
| TCAGCATAAGCCCGTTTAGA+AGG | - | chr6.3:56729978-56729997 | None:intergenic | 45.0% | |
| TCATAAGGGGCAAGCAGTAT+TGG | - | chr6.3:56732939-56732958 | None:intergenic | 45.0% | |
| TCCAATTCCACACTCTCACT+TGG | - | chr6.3:56733964-56733983 | None:intergenic | 45.0% | |
| TGCATCATGCATCCCACAAA+GGG | - | chr6.3:56733230-56733249 | None:intergenic | 45.0% | |
| TTGTAACAACCTGTCCAGAC+TGG | - | chr6.3:56731290-56731309 | None:intergenic | 45.0% | |
| ! | CACTCTTGGAATGTTGGTGA+TGG | + | chr6.3:56730203-56730222 | MS.gene79299:CDS | 45.0% |
| ! | GTGTGTTTTCAATGGCAAGC+AGG | + | chr6.3:56729885-56729904 | MS.gene79299:CDS | 45.0% |
| ! | TCAGGGTGAAGTATGGATTG+CGG | + | chr6.3:56734107-56734126 | MS.gene79299:CDS | 45.0% |
| ! | TGGTGATGTCTGTTCTTTGC+TGG | + | chr6.3:56732442-56732461 | MS.gene79299:CDS | 45.0% |
| !! | ACCAGCTCTGAACCTAAAAC+TGG | - | chr6.3:56731973-56731992 | None:intergenic | 45.0% |
| !! | AGTTTTTCTGGTAATCGGCG+TGG | + | chr6.3:56730005-56730024 | MS.gene79299:intron | 45.0% |
| !! | TCCGTTGTTTCTTTCAGGTG+TGG | + | chr6.3:56732370-56732389 | MS.gene79299:intron | 45.0% |
| !! | TTCTTCACTGGTGATGGAAC+TGG | + | chr6.3:56733938-56733957 | MS.gene79299:CDS | 45.0% |
| !!! | TCCAGTTTTAGGTTCAGAGC+TGG | + | chr6.3:56731969-56731988 | MS.gene79299:intron | 45.0% |
| !!! | ATATTTATAATTTTGAATTA+TGG | + | chr6.3:56730415-56730434 | MS.gene79299:intron | 5.0% |
| ACAGACACTGACAGAGCACA+CGG | + | chr6.3:56732416-56732435 | MS.gene79299:CDS | 50.0% | |
| AGCTGGTCAGTACCACTATC+TGG | + | chr6.3:56731986-56732005 | MS.gene79299:intron | 50.0% | |
| AGTGGAATTGCTATGCCCTC+TGG | + | chr6.3:56731210-56731229 | MS.gene79299:CDS | 50.0% | |
| CTTACGACGGCAGATCATAG+AGG | - | chr6.3:56733300-56733319 | None:intergenic | 50.0% | |
| GAATGGCTGCAAAGGATGGA+CGG | - | chr6.3:56734175-56734194 | None:intergenic | 50.0% | |
| GAGCCAGCTGCATCACTTAA+GGG | + | chr6.3:56732193-56732212 | MS.gene79299:CDS | 50.0% | |
| GCATGAATGGCTGCAAAGGA+TGG | - | chr6.3:56734179-56734198 | None:intergenic | 50.0% | |
| GCTGGTCAGTACCACTATCT+GGG | + | chr6.3:56731987-56732006 | MS.gene79299:intron | 50.0% | |
| GGGTATGCCAACAAAAAGCC+AGG | - | chr6.3:56731526-56731545 | None:intergenic | 50.0% | |
| GGTGGCACATTAGCAATACC+CGG | + | chr6.3:56731106-56731125 | MS.gene79299:intron | 50.0% | |
| GTATGATCAGTGAAGGTCCC+TGG | + | chr6.3:56731505-56731524 | MS.gene79299:CDS | 50.0% | |
| GTGCATCATGCATCCCACAA+AGG | - | chr6.3:56733231-56733250 | None:intergenic | 50.0% | |
| GTGTGGTATGCTACGGAAAG+TGG | + | chr6.3:56732585-56732604 | MS.gene79299:CDS | 50.0% | |
| GTTACGGTACTACGTCTAGC+AGG | - | chr6.3:56731661-56731680 | None:intergenic | 50.0% | |
| TAAGCGCGTCTATTGGTAGG+TGG | + | chr6.3:56731088-56731107 | MS.gene79299:intron | 50.0% | |
| TATGCTCTTTGCTGGTACGC+AGG | + | chr6.3:56731796-56731815 | MS.gene79299:CDS | 50.0% | |
| TCACTTAAGGGTCATACCCG+TGG | + | chr6.3:56732205-56732224 | MS.gene79299:CDS | 50.0% | |
| TGACCCTTAAGTGATGCAGC+TGG | - | chr6.3:56732199-56732218 | None:intergenic | 50.0% | |
| TGCACGTTATTGGATGTGGC+CGG | - | chr6.3:56733995-56734014 | None:intergenic | 50.0% | |
| TGTGGGATGCATGATGCACA+AGG | + | chr6.3:56733232-56733251 | MS.gene79299:CDS | 50.0% | |
| ! | AATCGTCTTGGTGGGTCCAA+CGG | + | chr6.3:56729840-56729859 | MS.gene79299:CDS | 50.0% |
| ! | GCCAAGTGAGAGTGTGGAAT+TGG | + | chr6.3:56733960-56733979 | MS.gene79299:intron | 50.0% |
| ! | GTGAAGTATGGATTGCGGAG+AGG | + | chr6.3:56734112-56734131 | MS.gene79299:CDS | 50.0% |
| ! | TTATTGGATGTGGCCGGTTC+AGG | - | chr6.3:56733989-56734008 | None:intergenic | 50.0% |
| !! | GAAGGTCCCTGGCTTTTTGT+TGG | + | chr6.3:56731516-56731535 | MS.gene79299:CDS | 50.0% |
| !! | TTTTCTGGTAATCGGCGTGG+TGG | + | chr6.3:56730008-56730027 | MS.gene79299:intron | 50.0% |
| !!! | AGTTTTAATTCGTGGGGGCC+GGG | + | chr6.3:56730035-56730054 | MS.gene79299:intron | 50.0% |
| !!! | GAGTTTTAATTCGTGGGGGC+CGG | + | chr6.3:56730034-56730053 | MS.gene79299:intron | 50.0% |
| CGAGCCAGCTGCATCACTTA+AGG | + | chr6.3:56732192-56732211 | MS.gene79299:CDS | 55.0% | |
| GAACTGGCCAAGTGAGAGTG+TGG | + | chr6.3:56733954-56733973 | MS.gene79299:intron | 55.0% | |
| GAGGTGCGAGCAATTCAGAC+TGG | + | chr6.3:56733902-56733921 | MS.gene79299:CDS | 55.0% | |
| TGGACGGCTGAAGAGAATCC+AGG | - | chr6.3:56734159-56734178 | None:intergenic | 55.0% | |
| ! | CGAGCAATTCAGACTGGTCC+TGG | + | chr6.3:56733908-56733927 | MS.gene79299:CDS | 55.0% |
| !! | TGCAGCTGGCTCGAAACAGT+TGG | - | chr6.3:56732185-56732204 | None:intergenic | 55.0% |
| !!! | GTTTTAATTCGTGGGGGCCG+GGG | + | chr6.3:56730036-56730055 | MS.gene79299:intron | 55.0% |
| ACTGACAGAGCACACGGCTG+TGG | + | chr6.3:56732422-56732441 | MS.gene79299:CDS | 60.0% | |
| TTGGGACTGCCAGTCTGGAC+AGG | + | chr6.3:56731278-56731297 | MS.gene79299:CDS | 60.0% | |
| ! | AGGGTTTGGGACTGCCAGTC+TGG | + | chr6.3:56731273-56731292 | MS.gene79299:CDS | 60.0% |
| !! | GTAGGTGGTGGTGGTGGTAG+AGG | + | chr6.3:56730101-56730120 | MS.gene79299:intron | 60.0% |
| ! | CGTCTTGGTGGGTCCAACGG+TGG | + | chr6.3:56729843-56729862 | MS.gene79299:CDS | 65.0% |
| !! | AGAGGTGGTGGACGAGGTCG+CGG | + | chr6.3:56730059-56730078 | MS.gene79299:intron | 65.0% |
| !! | GGTGGTGTAGGTGGTGGTGG+TGG | + | chr6.3:56730095-56730114 | MS.gene79299:intron | 65.0% |
| AATTCGTGGGGGCCGGGGAG+AGG | + | chr6.3:56730041-56730060 | MS.gene79299:intron | 70.0% | |
| CCTCGTCCACCACCTCTCCC+CGG | - | chr6.3:56730056-56730075 | None:intergenic | 70.0% | |
| GGACGGGGTGGTGTAGGTGG+TGG | + | chr6.3:56730089-56730108 | MS.gene79299:intron | 70.0% | |
| GTGGACGAGGTCGCGGTGGT+GGG | + | chr6.3:56730066-56730085 | MS.gene79299:intron | 70.0% | |
| TGGACGAGGTCGCGGTGGTG+GGG | + | chr6.3:56730067-56730086 | MS.gene79299:intron | 70.0% | |
| ! | CGGGGTGGTGTAGGTGGTGG+TGG | + | chr6.3:56730092-56730111 | MS.gene79299:intron | 70.0% |
| GGGGGACGGGGTGGTGTAGG+TGG | + | chr6.3:56730086-56730105 | MS.gene79299:intron | 75.0% | |
| GGTGGACGAGGTCGCGGTGG+TGG | + | chr6.3:56730065-56730084 | MS.gene79299:intron | 75.0% | |
| GGTGGGGGACGGGGTGGTGT+AGG | + | chr6.3:56730083-56730102 | MS.gene79299:intron | 75.0% | |
| ! | GGACGAGGTCGCGGTGGTGG+GGG | + | chr6.3:56730068-56730087 | MS.gene79299:intron | 75.0% |
| !! | AGGTCGCGGTGGTGGGGGAC+GGG | + | chr6.3:56730073-56730092 | MS.gene79299:intron | 75.0% |
| !! | CCGGGGAGAGGTGGTGGACG+AGG | + | chr6.3:56730053-56730072 | MS.gene79299:intron | 75.0% |
| !! | GAGGTCGCGGTGGTGGGGGA+CGG | + | chr6.3:56730072-56730091 | MS.gene79299:intron | 75.0% |
| !! | GGTGGTGGACGAGGTCGCGG+TGG | + | chr6.3:56730062-56730081 | MS.gene79299:intron | 75.0% |
| ! | TCGTGGGGGCCGGGGAGAGG+TGG | + | chr6.3:56730044-56730063 | MS.gene79299:intron | 80.0% |
| ! | TGGGGGCCGGGGAGAGGTGG+TGG | + | chr6.3:56730047-56730066 | MS.gene79299:intron | 80.0% |
| !!! | GGTCGCGGTGGTGGGGGACG+GGG | + | chr6.3:56730074-56730093 | MS.gene79299:intron | 80.0% |
| !!! | CGCGGTGGTGGGGGACGGGG+TGG | + | chr6.3:56730077-56730096 | MS.gene79299:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 56729807 | 56734203 | 56729807 | ID=MS.gene79299 |
| chr6.3 | mRNA | 56729807 | 56734203 | 56729807 | ID=MS.gene79299.t1;Parent=MS.gene79299 |
| chr6.3 | exon | 56729807 | 56730014 | 56729807 | ID=MS.gene79299.t1.exon1;Parent=MS.gene79299.t1 |
| chr6.3 | CDS | 56729807 | 56730014 | 56729807 | ID=cds.MS.gene79299.t1;Parent=MS.gene79299.t1 |
| chr6.3 | exon | 56730168 | 56730262 | 56730168 | ID=MS.gene79299.t1.exon2;Parent=MS.gene79299.t1 |
| chr6.3 | CDS | 56730168 | 56730262 | 56730168 | ID=cds.MS.gene79299.t1;Parent=MS.gene79299.t1 |
| chr6.3 | exon | 56731204 | 56731299 | 56731204 | ID=MS.gene79299.t1.exon3;Parent=MS.gene79299.t1 |
| chr6.3 | CDS | 56731204 | 56731299 | 56731204 | ID=cds.MS.gene79299.t1;Parent=MS.gene79299.t1 |
| chr6.3 | exon | 56731468 | 56731557 | 56731468 | ID=MS.gene79299.t1.exon4;Parent=MS.gene79299.t1 |
| chr6.3 | CDS | 56731468 | 56731557 | 56731468 | ID=cds.MS.gene79299.t1;Parent=MS.gene79299.t1 |
| chr6.3 | exon | 56731716 | 56731817 | 56731716 | ID=MS.gene79299.t1.exon5;Parent=MS.gene79299.t1 |
| chr6.3 | CDS | 56731716 | 56731817 | 56731716 | ID=cds.MS.gene79299.t1;Parent=MS.gene79299.t1 |
| chr6.3 | exon | 56732145 | 56732291 | 56732145 | ID=MS.gene79299.t1.exon6;Parent=MS.gene79299.t1 |
| chr6.3 | CDS | 56732145 | 56732291 | 56732145 | ID=cds.MS.gene79299.t1;Parent=MS.gene79299.t1 |
| chr6.3 | exon | 56732387 | 56732506 | 56732387 | ID=MS.gene79299.t1.exon7;Parent=MS.gene79299.t1 |
| chr6.3 | CDS | 56732387 | 56732506 | 56732387 | ID=cds.MS.gene79299.t1;Parent=MS.gene79299.t1 |
| chr6.3 | exon | 56732585 | 56732644 | 56732585 | ID=MS.gene79299.t1.exon8;Parent=MS.gene79299.t1 |
| chr6.3 | CDS | 56732585 | 56732644 | 56732585 | ID=cds.MS.gene79299.t1;Parent=MS.gene79299.t1 |
| chr6.3 | exon | 56733217 | 56733314 | 56733217 | ID=MS.gene79299.t1.exon9;Parent=MS.gene79299.t1 |
| chr6.3 | CDS | 56733217 | 56733314 | 56733217 | ID=cds.MS.gene79299.t1;Parent=MS.gene79299.t1 |
| chr6.3 | exon | 56733868 | 56733964 | 56733868 | ID=MS.gene79299.t1.exon10;Parent=MS.gene79299.t1 |
| chr6.3 | CDS | 56733868 | 56733964 | 56733868 | ID=cds.MS.gene79299.t1;Parent=MS.gene79299.t1 |
| chr6.3 | exon | 56734063 | 56734203 | 56734063 | ID=MS.gene79299.t1.exon11;Parent=MS.gene79299.t1 |
| chr6.3 | CDS | 56734063 | 56734203 | 56734063 | ID=cds.MS.gene79299.t1;Parent=MS.gene79299.t1 |
| Gene Sequence |
| Protein sequence |
