AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene97690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene97690.t1 MTR_1g069105 100.000 446 0 0 1 446 1 446 0.0 899
MS.gene97690.t1 MTR_7g099640 96.644 447 12 2 1 446 1 445 0.0 862
MS.gene97690.t1 MTR_7g099640 96.437 421 12 2 1 420 1 419 0.0 809
MS.gene97690.t1 MTR_1g069105 99.465 374 2 0 1 374 1 374 0.0 751
MS.gene97690.t1 MTR_3g062510 50.970 361 173 2 68 427 41 398 3.56e-131 385
MS.gene97690.t1 MTR_4g094270 52.000 325 155 1 115 438 83 407 5.42e-114 341
MS.gene97690.t1 MTR_1g083330 44.670 394 186 3 65 437 34 416 4.72e-113 339
MS.gene97690.t1 MTR_4g033235 45.000 380 188 1 79 437 38 417 1.77e-112 337
MS.gene97690.t1 MTR_3g062510 52.769 307 140 3 68 372 40 343 2.36e-112 335
MS.gene97690.t1 MTR_3g117230 46.361 371 192 2 74 437 18 388 1.76e-107 324
MS.gene97690.t1 MTR_3g112260 45.251 358 196 0 80 437 28 385 7.33e-106 320
MS.gene97690.t1 MTR_1g095660 45.272 349 173 5 112 446 38 382 4.66e-101 307
MS.gene97690.t1 MTR_8g023550 43.109 341 171 4 112 446 85 408 9.58e-92 284
MS.gene97690.t1 MTR_7g101870 47.137 227 117 1 190 416 208 431 6.56e-61 212
MS.gene97690.t1 MTR_7g101870 41.026 234 138 0 182 415 473 706 1.68e-53 191
MS.gene97690.t1 MTR_1g063380 46.696 227 118 1 190 416 207 430 4.18e-60 210
MS.gene97690.t1 MTR_1g063380 41.453 234 137 0 182 415 472 705 2.31e-54 194
MS.gene97690.t1 MTR_7g010800 44.490 245 135 1 189 433 207 450 3.35e-59 205
MS.gene97690.t1 MTR_4g094662 40.816 245 144 1 189 433 230 473 1.41e-56 199
MS.gene97690.t1 MTR_2g438140 41.224 245 143 1 189 433 227 470 8.34e-56 196
MS.gene97690.t1 MTR_2g438140 41.224 245 143 1 189 433 287 530 1.61e-55 195
MS.gene97690.t1 MTR_7g078570 37.377 305 177 5 142 433 136 439 3.39e-55 194
MS.gene97690.t1 MTR_4g064350 43.320 247 136 3 190 433 322 567 7.13e-55 195
MS.gene97690.t1 MTR_7g088850 38.683 243 149 0 173 415 267 509 1.15e-54 191
MS.gene97690.t1 MTR_7g088850 26.446 242 164 4 211 440 36 275 4.87e-19 90.1
MS.gene97690.t1 MTR_2g095320 45.374 227 117 3 190 416 155 374 3.22e-54 192
MS.gene97690.t1 MTR_2g095320 38.261 230 129 2 186 415 419 635 2.24e-42 159
MS.gene97690.t1 MTR_2g095210 41.453 234 137 0 182 415 400 633 1.85e-53 191
MS.gene97690.t1 MTR_2g095210 51.899 79 38 0 190 268 209 287 6.41e-20 93.2
MS.gene97690.t1 MTR_7g096060 42.972 249 134 4 190 433 242 487 5.33e-53 189
MS.gene97690.t1 MTR_8g099605 39.442 251 143 2 190 432 165 414 6.88e-53 188
MS.gene97690.t1 MTR_6g059690 39.576 283 165 4 156 433 163 444 1.44e-52 187
MS.gene97690.t1 MTR_3g115110 40.000 245 146 1 189 433 250 493 2.50e-52 187
MS.gene97690.t1 MTR_8g099605 39.442 251 143 2 190 432 406 655 3.07e-52 189
MS.gene97690.t1 MTR_0376s0020 41.870 246 140 2 190 433 3 247 6.33e-52 183
MS.gene97690.t1 MTR_5g069780 42.126 254 139 4 183 431 308 558 3.23e-51 185
MS.gene97690.t1 MTR_7g088980 37.786 262 161 1 173 432 121 382 3.25e-50 176
MS.gene97690.t1 MTR_3g462930 41.667 252 143 3 183 431 299 549 4.08e-50 182
MS.gene97690.t1 MTR_7g088980 37.786 262 161 1 173 432 203 464 1.72e-49 176
MS.gene97690.t1 MTR_7g088980 29.452 146 97 3 267 408 28 171 8.74e-12 67.4
MS.gene97690.t1 MTR_7g088980 37.786 262 161 1 173 432 271 532 4.47e-49 176
MS.gene97690.t1 MTR_7g088980 29.545 220 149 3 193 408 22 239 2.69e-24 105
MS.gene97690.t1 MTR_7g088980 37.786 262 161 1 173 432 297 558 7.02e-49 176
MS.gene97690.t1 MTR_7g088980 29.442 197 133 3 216 408 71 265 1.62e-20 94.7
MS.gene97690.t1 MTR_2g101290 39.683 252 148 2 190 438 417 667 1.39e-48 177
MS.gene97690.t1 MTR_3g104470 37.943 282 164 3 153 434 196 466 1.54e-48 177
MS.gene97690.t1 MTR_2g101290 39.683 252 148 2 190 438 417 667 4.61e-48 177
MS.gene97690.t1 MTR_7g088830 40.161 249 146 2 186 432 656 903 2.82e-47 174
MS.gene97690.t1 MTR_7g088830 34.579 214 124 5 227 429 432 640 1.27e-28 119
MS.gene97690.t1 MTR_2g078630 38.298 235 134 4 187 414 65 295 4.59e-47 174
MS.gene97690.t1 MTR_2g078630 38.298 235 134 4 187 414 593 823 8.33e-47 174
MS.gene97690.t1 MTR_6g016600 40.486 247 141 3 190 434 319 561 4.56e-46 168
MS.gene97690.t1 MTR_7g089040 41.036 251 145 2 184 432 681 930 5.10e-46 171
MS.gene97690.t1 MTR_7g089040 32.636 239 152 4 187 421 385 618 2.37e-30 125
MS.gene97690.t1 MTR_4g067100 39.754 244 138 3 189 426 381 621 5.53e-46 171
MS.gene97690.t1 MTR_4g067100 39.754 244 138 3 189 426 381 621 5.58e-46 171
MS.gene97690.t1 MTR_1g028390 37.600 250 147 3 187 434 328 570 1.16e-45 169
MS.gene97690.t1 MTR_3g104480 36.140 285 171 3 150 434 191 464 5.79e-45 166
MS.gene97690.t1 MTR_5g075340 39.184 245 145 2 190 434 231 471 1.64e-43 163
MS.gene97690.t1 MTR_7g089290 39.062 256 143 8 178 424 629 880 1.84e-43 163
MS.gene97690.t1 MTR_7g089290 39.062 256 143 8 178 424 657 908 1.85e-43 163
MS.gene97690.t1 MTR_4g011810 36.538 260 151 5 182 432 236 490 3.44e-42 156
MS.gene97690.t1 MTR_2g007010 38.938 226 136 2 190 414 240 464 9.42e-42 158
MS.gene97690.t1 MTR_2g007010 38.627 233 138 3 186 416 526 755 4.74e-40 153
MS.gene97690.t1 MTR_1g088730 38.528 231 133 5 189 415 933 1158 1.09e-40 155
MS.gene97690.t1 MTR_1g101870 38.261 230 134 5 189 415 558 782 3.13e-40 154
MS.gene97690.t1 MTR_1g101870 38.261 230 134 5 189 415 506 730 3.76e-40 154
MS.gene97690.t1 MTR_7g075520 36.214 243 146 5 176 415 200 436 3.88e-40 150
MS.gene97690.t1 MTR_5g009840 36.522 230 138 4 189 415 517 741 8.78e-40 152
MS.gene97690.t1 MTR_1g099470 37.391 230 135 5 189 415 435 658 1.77e-39 151
MS.gene97690.t1 MTR_4g053350 35.055 271 146 10 182 446 121 367 2.22e-39 147
MS.gene97690.t1 MTR_8g099065 35.217 230 141 4 189 415 535 759 2.26e-39 151
MS.gene97690.t1 MTR_4g053350 35.055 271 146 10 182 446 121 367 2.32e-39 147
MS.gene97690.t1 MTR_3g096000 38.723 235 133 5 189 415 297 528 2.47e-39 151
MS.gene97690.t1 MTR_1g088750 37.229 231 136 5 189 415 890 1115 3.35e-39 151
MS.gene97690.t1 MTR_1g088750 37.229 231 136 5 189 415 939 1164 3.53e-39 151
MS.gene97690.t1 MTR_2g086160 33.955 268 153 9 182 446 126 372 7.83e-39 145
MS.gene97690.t1 MTR_2g086160 36.564 227 134 7 182 405 126 345 1.47e-38 143
MS.gene97690.t1 MTR_4g096870 36.596 235 142 5 182 414 113 342 2.25e-38 144
MS.gene97690.t1 MTR_3g089100 36.889 225 133 5 189 409 903 1122 4.41e-38 148
MS.gene97690.t1 MTR_3g089100 36.889 225 133 5 189 409 898 1117 4.57e-38 148
MS.gene97690.t1 MTR_3g089100 36.889 225 133 5 189 409 932 1151 4.71e-38 148
MS.gene97690.t1 MTR_1g099480 36.522 230 138 5 189 415 469 693 3.24e-37 145
MS.gene97690.t1 MTR_6g033740 36.522 230 137 5 189 415 501 724 3.39e-37 145
MS.gene97690.t1 MTR_3g023900 34.457 267 159 6 182 436 230 492 4.47e-37 144
MS.gene97690.t1 MTR_3g023900 33.969 262 152 3 173 416 516 774 3.27e-34 136
MS.gene97690.t1 MTR_3g092070 36.522 230 136 5 190 415 83 306 3.48e-36 137
MS.gene97690.t1 MTR_3g092070 36.522 230 136 5 190 415 83 306 4.55e-36 135
MS.gene97690.t1 MTR_6g023875 37.398 246 140 8 177 416 371 608 1.19e-35 140
MS.gene97690.t1 MTR_3g023890 38.306 248 126 5 190 415 387 629 1.71e-34 136
MS.gene97690.t1 MTR_3g023890 34.468 235 135 7 200 424 106 331 5.80e-29 120
MS.gene97690.t1 MTR_4g088885 33.922 283 158 7 178 433 213 493 2.66e-34 136
MS.gene97690.t1 MTR_5g075360 33.969 262 166 3 176 434 1 258 4.65e-34 133
MS.gene97690.t1 MTR_5g075360 33.700 273 172 4 167 434 166 434 6.84e-34 134
MS.gene97690.t1 MTR_3g092080 36.364 231 135 6 190 415 86 309 1.04e-33 130
MS.gene97690.t1 MTR_5g075360 34.979 243 154 2 191 433 69 307 1.71e-33 132
MS.gene97690.t1 MTR_3g092080 36.364 231 135 6 190 415 86 309 1.85e-33 130
MS.gene97690.t1 MTR_3g104490 35.772 246 128 4 190 433 209 426 2.27e-33 133
MS.gene97690.t1 MTR_1g044600 31.597 288 140 6 156 433 135 375 2.36e-33 132
MS.gene97690.t1 MTR_6g023855 37.131 237 138 8 184 415 242 472 4.62e-33 131
MS.gene97690.t1 MTR_5g075360 34.979 243 154 2 191 433 245 483 5.02e-33 132
MS.gene97690.t1 MTR_5g074850 35.317 252 145 6 191 431 501 745 4.59e-32 130
MS.gene97690.t1 MTR_8g056860 32.245 245 152 3 196 431 477 716 4.88e-32 130
MS.gene97690.t1 MTR_4g112600 71.795 78 21 1 192 268 4 81 1.93e-31 115
MS.gene97690.t1 MTR_2g024440 35.931 231 127 7 189 408 215 435 5.81e-31 124
MS.gene97690.t1 MTR_8g469460 34.553 246 123 4 190 433 209 418 1.24e-30 125
MS.gene97690.t1 MTR_2g024440 35.931 231 127 7 189 408 297 517 1.30e-30 124
MS.gene97690.t1 MTR_2g024440 35.931 231 127 7 189 408 298 518 1.40e-30 124
MS.gene97690.t1 MTR_7g088980 30.916 262 136 2 173 432 271 489 1.91e-30 123
MS.gene97690.t1 MTR_7g088980 29.545 220 149 3 193 408 22 239 1.60e-24 106
MS.gene97690.t1 MTR_7g088980 30.916 262 136 2 173 432 297 515 2.94e-30 123
MS.gene97690.t1 MTR_7g088980 29.442 197 133 3 216 408 71 265 1.19e-20 94.7
MS.gene97690.t1 MTR_1g099480 39.766 171 96 4 189 356 469 635 5.97e-29 120
MS.gene97690.t1 MTR_4g074920 33.043 230 127 6 190 415 671 877 1.61e-28 119
MS.gene97690.t1 MTR_8g099065 38.012 171 98 4 189 356 535 700 2.10e-28 118
MS.gene97690.t1 MTR_6g023865 32.319 263 142 8 177 415 147 397 6.36e-28 115
MS.gene97690.t1 MTR_1g080430 30.041 243 153 6 173 411 659 888 9.30e-23 102
MS.gene97690.t1 MTR_1g080430 31.527 203 134 3 173 371 659 860 1.13e-22 102
MS.gene97690.t1 MTR_6g023845 30.159 252 121 11 177 415 105 314 5.30e-16 79.7
MS.gene97690.t1 MTR_4g083460 28.689 244 115 6 190 415 839 1041 6.68e-16 80.9
MS.gene97690.t1 MTR_8g076920 34.682 173 99 6 192 358 225 389 6.90e-14 73.9
MS.gene97690.t1 MTR_5g020980 34.161 161 93 5 203 358 229 381 1.51e-13 72.8
MS.gene97690.t1 MTR_5g020530 34.965 143 79 5 224 362 387 519 2.07e-13 72.8
MS.gene97690.t1 MTR_2g076840 30.435 184 111 7 195 370 477 651 5.21e-12 68.6
MS.gene97690.t1 MTR_6g042290 33.333 156 84 6 215 358 236 383 1.62e-11 66.6
MS.gene97690.t1 MTR_6g009510 25.773 291 181 11 77 358 74 338 1.67e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene97690.t1 AT4G29040 94.843 446 20 1 1 446 1 443 0.0 853
MS.gene97690.t1 AT2G20140 94.395 446 22 1 1 446 1 443 0.0 847
MS.gene97690.t1 AT5G58290 51.934 362 170 2 67 427 33 391 1.58e-133 390
MS.gene97690.t1 AT5G20000 51.692 325 156 1 115 438 85 409 4.33e-112 336
MS.gene97690.t1 AT5G19990 51.385 325 157 1 115 438 27 351 6.01e-112 334
MS.gene97690.t1 AT5G19990 51.385 325 157 1 115 438 85 409 6.53e-112 336
MS.gene97690.t1 AT5G19990 51.385 325 157 1 115 438 85 409 6.53e-112 336
MS.gene97690.t1 AT1G09100 45.789 380 185 2 79 437 37 416 2.31e-111 335
MS.gene97690.t1 AT3G05530 46.281 363 174 1 96 437 55 417 2.52e-111 335
MS.gene97690.t1 AT1G45000 46.631 371 191 3 74 437 15 385 2.83e-106 321
MS.gene97690.t1 AT5G43010 48.256 344 174 2 98 437 42 385 1.82e-105 318
MS.gene97690.t1 AT1G53750 46.334 341 175 3 112 446 85 423 3.14e-104 317
MS.gene97690.t1 AT1G53780 46.199 342 174 4 112 446 257 595 4.26e-98 306
MS.gene97690.t1 AT1G53780 46.199 342 174 4 112 446 257 595 4.26e-98 306
MS.gene97690.t1 AT1G53780 46.199 342 174 4 112 446 256 594 4.93e-98 306
MS.gene97690.t1 AT1G53780 46.199 342 174 4 112 446 278 616 7.72e-98 306
MS.gene97690.t1 AT1G45000 45.247 263 137 3 74 329 15 277 1.78e-67 219
MS.gene97690.t1 AT3G53230 47.137 227 117 1 190 416 207 430 1.69e-60 211
MS.gene97690.t1 AT3G53230 40.323 248 148 0 182 429 472 719 1.68e-54 194
MS.gene97690.t1 AT3G09840 47.137 227 117 2 190 416 206 429 9.49e-60 209
MS.gene97690.t1 AT3G09840 41.702 235 136 1 182 415 471 705 1.54e-51 186
MS.gene97690.t1 AT5G03340 47.137 227 117 2 190 416 206 429 9.88e-60 209
MS.gene97690.t1 AT5G03340 41.453 234 137 0 182 415 471 704 2.82e-53 191
MS.gene97690.t1 AT2G30950 41.633 245 142 1 189 433 229 472 2.39e-57 201
MS.gene97690.t1 AT2G30950 41.633 245 142 1 189 433 225 468 2.75e-57 201
MS.gene97690.t1 AT2G30950 41.633 245 142 1 189 433 225 468 2.75e-57 201
MS.gene97690.t1 AT2G30950 41.633 245 142 1 189 433 225 468 2.75e-57 201
MS.gene97690.t1 AT5G15250 43.673 245 137 1 189 433 222 465 1.60e-55 196
MS.gene97690.t1 AT1G06430 40.408 245 145 1 189 433 218 461 1.75e-55 196
MS.gene97690.t1 AT1G06430 40.408 245 145 1 189 433 218 461 1.75e-55 196
MS.gene97690.t1 AT1G06430 40.408 245 145 1 189 433 218 461 1.75e-55 196
MS.gene97690.t1 AT1G07510 43.725 247 135 3 190 433 326 571 3.66e-55 196
MS.gene97690.t1 AT3G47060 43.952 248 131 4 189 431 323 567 7.52e-54 192
MS.gene97690.t1 AT5G58870 43.952 248 131 4 189 431 327 571 9.48e-54 192
MS.gene97690.t1 AT1G50250 40.000 245 146 1 189 433 260 503 1.35e-52 188
MS.gene97690.t1 AT5G15250 39.925 268 137 2 189 433 222 488 3.97e-52 183
MS.gene97690.t1 AT2G29080 43.496 246 136 2 190 433 321 565 9.41e-52 187
MS.gene97690.t1 AT4G23940 39.044 251 144 2 190 432 429 678 7.05e-51 185
MS.gene97690.t1 AT5G42270 38.776 245 149 1 189 433 248 491 1.03e-50 182
MS.gene97690.t1 AT3G15120 39.485 233 132 3 187 413 725 954 4.79e-49 180
MS.gene97690.t1 AT3G15120 39.485 233 132 3 187 413 715 944 5.11e-49 180
MS.gene97690.t1 AT2G03670 38.400 250 151 2 186 432 281 530 1.58e-48 175
MS.gene97690.t1 AT2G03670 32.661 248 160 3 191 432 22 268 1.30e-35 139
MS.gene97690.t1 AT1G05910 40.323 248 139 3 189 430 379 623 1.85e-48 178
MS.gene97690.t1 AT2G26140 40.408 245 142 2 190 434 226 466 6.29e-48 175
MS.gene97690.t1 AT3G56690 40.000 230 137 1 186 415 719 947 2.47e-47 175
MS.gene97690.t1 AT3G56690 42.347 196 109 2 220 414 413 605 1.10e-42 161
MS.gene97690.t1 AT3G16290 39.749 239 143 1 190 428 409 646 4.47e-47 174
MS.gene97690.t1 AT5G53170 37.200 250 148 3 187 434 358 600 1.45e-45 169
MS.gene97690.t1 AT3G02450 39.850 266 152 4 183 444 326 587 1.55e-44 164
MS.gene97690.t1 AT2G45500 35.341 249 150 6 171 415 63 304 1.78e-43 156
MS.gene97690.t1 AT2G45500 35.341 249 150 6 171 415 63 304 1.78e-43 156
MS.gene97690.t1 AT2G45500 34.783 253 154 6 167 415 192 437 2.48e-42 156
MS.gene97690.t1 AT2G45500 35.341 249 150 6 171 415 200 441 2.84e-42 156
MS.gene97690.t1 AT1G03000 37.743 257 153 6 178 430 645 898 3.47e-42 160
MS.gene97690.t1 AT2G45500 34.783 253 154 6 167 415 202 447 4.41e-42 155
MS.gene97690.t1 AT1G80350 35.769 260 153 5 182 432 230 484 1.98e-41 154
MS.gene97690.t1 AT1G02890 38.095 231 134 5 189 415 942 1167 4.61e-41 157
MS.gene97690.t1 AT4G02480 38.095 231 134 5 189 415 961 1186 6.94e-41 156
MS.gene97690.t1 AT4G28000 37.826 230 134 6 189 415 518 741 1.47e-40 155
MS.gene97690.t1 AT4G28000 37.826 230 134 6 189 415 518 741 1.59e-40 155
MS.gene97690.t1 AT4G28000 37.826 230 134 6 189 415 516 739 1.65e-40 154
MS.gene97690.t1 AT5G53540 37.826 230 133 5 190 415 86 309 2.93e-40 149
MS.gene97690.t1 AT5G08470 36.726 226 140 1 190 415 843 1065 8.97e-40 153
MS.gene97690.t1 AT5G08470 36.726 226 140 1 190 415 834 1056 9.54e-40 153
MS.gene97690.t1 AT2G34560 36.283 226 140 3 190 414 102 324 4.75e-39 145
MS.gene97690.t1 AT2G34560 36.283 226 140 3 190 414 111 333 5.44e-39 145
MS.gene97690.t1 AT1G64110 35.652 230 140 5 189 415 517 741 1.38e-38 149
MS.gene97690.t1 AT1G64110 35.652 230 140 5 189 415 517 741 1.38e-38 149
MS.gene97690.t1 AT1G64110 35.652 230 140 5 189 415 519 743 1.46e-38 149
MS.gene97690.t1 AT1G64110 35.652 230 140 5 189 415 519 743 1.46e-38 149
MS.gene97690.t1 AT1G64110 35.652 230 140 5 189 415 514 738 1.73e-38 149
MS.gene97690.t1 AT5G52882 36.957 230 136 6 189 415 515 738 3.16e-38 148
MS.gene97690.t1 AT5G64580 37.447 235 136 6 189 415 314 545 6.51e-38 147
MS.gene97690.t1 AT3G01610 34.959 246 145 3 180 414 222 463 8.35e-38 147
MS.gene97690.t1 AT3G01610 36.123 227 140 3 190 415 527 749 1.75e-33 134
MS.gene97690.t1 AT3G01610 34.959 246 145 3 180 414 222 463 8.35e-38 147
MS.gene97690.t1 AT3G01610 36.123 227 140 3 190 415 527 749 1.71e-33 134
MS.gene97690.t1 AT4G27680 37.229 231 133 6 190 415 83 306 1.09e-37 142
MS.gene97690.t1 AT1G50140 37.500 232 132 6 190 415 713 937 1.59e-37 146
MS.gene97690.t1 AT1G50140 37.500 232 132 6 190 415 713 937 1.59e-37 146
MS.gene97690.t1 AT1G50140 37.500 232 132 6 190 415 713 937 1.59e-37 146
MS.gene97690.t1 AT1G50140 37.500 232 132 6 190 415 691 915 1.62e-37 146
MS.gene97690.t1 AT1G50140 37.500 232 132 6 190 415 691 915 1.62e-37 146
MS.gene97690.t1 AT2G03670 32.661 248 160 3 191 432 22 268 1.05e-36 140
MS.gene97690.t1 AT2G03670 38.028 142 87 1 186 326 281 422 3.48e-22 99.0
MS.gene97690.t1 AT2G27600 34.686 271 147 11 182 446 123 369 1.14e-36 140
MS.gene97690.t1 AT3G19740 36.087 230 138 5 190 415 703 927 6.45e-36 141
MS.gene97690.t1 AT4G24860 35.065 231 141 5 189 415 791 1016 8.48e-36 141
MS.gene97690.t1 AT4G24860 35.065 231 141 5 189 415 818 1043 8.74e-36 141
MS.gene97690.t1 AT4G24860 35.065 231 141 5 189 415 816 1041 8.90e-36 141
MS.gene97690.t1 AT4G24860 35.065 231 141 5 189 415 814 1039 1.16e-35 140
MS.gene97690.t1 AT3G27120 36.327 245 142 8 177 415 389 625 2.41e-35 139
MS.gene97690.t1 AT1G79560 32.653 245 151 3 196 431 497 736 2.39e-32 130
MS.gene97690.t1 AT1G79560 32.653 245 151 3 196 431 497 736 2.51e-32 130
MS.gene97690.t1 AT1G79560 32.653 245 151 3 196 431 497 736 2.80e-32 130
MS.gene97690.t1 AT4G04910 33.453 278 156 8 178 428 203 478 5.45e-32 129
MS.gene97690.t1 AT4G04180 35.808 229 130 6 189 408 317 537 8.85e-32 128
MS.gene97690.t1 AT4G04180 35.808 229 130 6 189 408 312 532 9.27e-32 128
MS.gene97690.t1 AT1G62130 32.143 224 133 6 189 409 744 951 5.64e-28 117
MS.gene97690.t1 AT1G62130 32.143 224 133 6 189 409 751 958 5.87e-28 117
MS.gene97690.t1 AT1G02890 33.766 231 116 6 189 415 942 1139 2.59e-26 112
MS.gene97690.t1 AT3G04340 33.511 188 120 3 186 372 782 965 4.96e-23 103
MS.gene97690.t1 AT5G08470 35.135 148 93 1 190 337 843 987 6.42e-20 93.2
MS.gene97690.t1 AT2G18193 34.568 162 93 6 201 357 219 372 1.07e-12 70.1
MS.gene97690.t1 AT2G18330 31.844 179 104 7 186 362 354 516 9.50e-12 67.4
MS.gene97690.t1 AT4G36580 30.481 187 100 7 184 362 349 513 1.05e-11 67.4

Find 123 sgRNAs with CRISPR-Local

Find 323 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCGCTGCCGTCTTGTTTC+CGG 0.187678 1.2:-52295610 None:intergenic
AGCAAGGTCTTTCCTGTTCC+AGG 0.251915 1.2:-52297641 None:intergenic
AAAAGTTCCCTCACAAGTTT+TGG 0.253191 1.2:-52298385 None:intergenic
TGGTTTAGATGCGCAGATTC+AGG 0.304376 1.2:+52297523 MS.gene97690:CDS
GGTGAAGGATTATTTGTTGA+TGG 0.316417 1.2:+52295778 MS.gene97690:CDS
AGGAGATGTAAAAGTGATTC+TGG 0.336312 1.2:+52298697 MS.gene97690:CDS
AAGCTGGCTTACTTGCTCTA+AGG 0.338560 1.2:+52299055 MS.gene97690:CDS
GCCGATGAGTGTTGGGAATC+TGG 0.341792 1.2:+52295892 MS.gene97690:CDS
GCCGTCTTGTTTCCGGTCAC+CGG 0.353994 1.2:-52295603 None:intergenic
CTTCACATATATAGTCCTTC+TGG 0.358495 1.2:-52300123 None:intergenic
CCTGAACTATATGAAGATAT+TGG 0.363458 1.2:+52297581 MS.gene97690:CDS
GAAAGTCGAGAAGGCTCCTT+TGG 0.379073 1.2:+52297481 MS.gene97690:CDS
TTGAATCAAAACCATCTAAC+TGG 0.394542 1.2:-52298673 None:intergenic
ATTCTCTGGAGCTGATATAA+AGG 0.399716 1.2:+52299020 MS.gene97690:CDS
TCCTTTGCCTTCTTAAAGTC+GGG 0.401797 1.2:-52300069 None:intergenic
CCAATATCTTCATATAGTTC+AGG 0.405223 1.2:-52297581 None:intergenic
TCATGCTATTGTTTCGAGTT+CGG 0.405752 1.2:+52295934 MS.gene97690:CDS
GGCGGAGGAAGATAGATCTA+AGG 0.407560 1.2:+52295850 MS.gene97690:CDS
TATCAGGTTCTATCGGTTGT+TGG 0.410524 1.2:+52297419 MS.gene97690:intron
CATATAGTTCAGGATGTGTA+AGG 0.423583 1.2:-52297571 None:intergenic
GGTCACCGGGATGGCCTTGT+CGG 0.424135 1.2:-52295589 None:intergenic
GCTATTGTTTCGAGTTCGGT+TGG 0.424882 1.2:+52295938 MS.gene97690:CDS
GCCTTGTCGGTTCATGCCGC+CGG 0.428871 1.2:-52295576 None:intergenic
TGTTTCGAGTTCGGTTGGGC+CGG 0.432915 1.2:+52295943 MS.gene97690:CDS
TCATGCCGCCGGGAGTTCCT+TGG 0.437595 1.2:-52295565 None:intergenic
ATCCTTTGCCTTCTTAAAGT+CGG 0.438674 1.2:-52300070 None:intergenic
CTCAGCTTGCACTTCGATAC+CGG 0.441459 1.2:-52295737 None:intergenic
GCTACATTCTTGCGTGTAGT+AGG 0.441990 1.2:+52298328 MS.gene97690:CDS
TCGTAAACAACGCAAACAAA+AGG 0.444206 1.2:+52295679 MS.gene97690:CDS
GTGGCTCGCCGATGAGTGTT+GGG 0.452232 1.2:+52295885 MS.gene97690:CDS
ACACGCGCCGGTGGTGCTGC+TGG 0.453673 1.2:-52295653 None:intergenic
CCGTCTTGTTTCCGGTCACC+GGG 0.455694 1.2:-52295602 None:intergenic
GTTGGGCCGGAGTATTATGT+TGG 0.456605 1.2:+52295956 MS.gene97690:CDS
GAGTTGCTGAACCAGTTAGA+TGG 0.457903 1.2:+52298662 MS.gene97690:CDS
CGACCAGGTCGTAGCAAAGC+TGG 0.459189 1.2:-52298746 None:intergenic
TCAAGAGAGGTTGAAGCCTC+AGG 0.464256 1.2:+52295820 MS.gene97690:CDS
ATGACGAAGGATGAATTCTC+TGG 0.469733 1.2:+52299006 MS.gene97690:CDS
GTGATGTTTAAGAAGAAAGA+AGG 0.471189 1.2:+52300096 MS.gene97690:CDS
CTATTGTTTCGAGTTCGGTT+GGG 0.476955 1.2:+52295939 MS.gene97690:CDS
CGTGGCTCGCCGATGAGTGT+TGG 0.479586 1.2:+52295884 MS.gene97690:CDS
AGTTCAAACCTTTGCAAGCA+AGG 0.479869 1.2:-52297657 None:intergenic
TTGGGCCGGAGTATTATGTT+GGG 0.486241 1.2:+52295957 MS.gene97690:CDS
ATCAAGACTTTCAATTCTGT+TGG 0.488586 1.2:-52298723 None:intergenic
TACGACCTGGTCGTATTGAT+AGG 0.488820 1.2:+52298756 MS.gene97690:CDS
TTATATGGAGAACCTGGAAC+AGG 0.489995 1.2:+52297629 MS.gene97690:CDS
TGAATTGATACAAAAGTACT+TGG 0.490609 1.2:+52298354 MS.gene97690:CDS
GGTAACCGTGAAGCGGCATC+CGG 0.494841 1.2:-52295704 None:intergenic
GACAAGGCCATCCCGGTGAC+CGG 0.499250 1.2:+52295591 MS.gene97690:CDS
GAATCTTATGCTGACATTGG+TGG 0.503180 1.2:+52297503 MS.gene97690:CDS
GTTGAAGCCTCAGGAGGAGA+AGG 0.505715 1.2:+52295829 MS.gene97690:CDS
CCTTGTCGGTTCATGCCGCC+GGG 0.509201 1.2:-52295575 None:intergenic
AAATTAAGATACACACATCA+AGG 0.509917 1.2:+52298944 MS.gene97690:intron
AAGGCAATATGTACTGAAGC+TGG 0.512575 1.2:+52299039 MS.gene97690:CDS
ACTTTCATGACTGAGACCAT+TGG 0.513179 1.2:-52297464 None:intergenic
ATTCGAACCAGCAGCACCAC+CGG 0.515131 1.2:+52295646 MS.gene97690:CDS
TTGGAATCTTATGCTGACAT+TGG 0.515821 1.2:+52297500 MS.gene97690:CDS
TATTGGCATCAAGCCACCTA+AGG 0.517311 1.2:+52297598 MS.gene97690:CDS
AATCGATCGACGATGGGCCA+AGG 0.521261 1.2:+52295548 None:intergenic
CTTGTTTCCGGTCACCGGGA+TGG 0.534444 1.2:-52295598 None:intergenic
TCATCAATGAAAACAATAGC+AGG 0.540016 1.2:-52298430 None:intergenic
GAAGGATTATTTGTTGATGG+AGG 0.541197 1.2:+52295781 MS.gene97690:CDS
CGTAAACAACGCAAACAAAA+GGG 0.541325 1.2:+52295680 MS.gene97690:CDS
TCTAAGGGAACGCCGAATGA+AGG 0.547948 1.2:+52299071 MS.gene97690:CDS
GATCAACTTCGTCTTGCAGA+AGG 0.548110 1.2:-52297442 None:intergenic
ATGAACCGACAAGGCCATCC+CGG 0.552573 1.2:+52295584 MS.gene97690:CDS
AGGAAAGACCTTGCTTGCAA+AGG 0.553721 1.2:+52297649 MS.gene97690:CDS
GACTCATCCCGACTTTAAGA+AGG 0.557748 1.2:+52300062 MS.gene97690:CDS
ACAACGCAAACAAAAGGGTC+CGG 0.558245 1.2:+52295685 MS.gene97690:CDS
GCCTCAGGAGGAGAAGGCGG+AGG 0.564123 1.2:+52295835 MS.gene97690:CDS
AGGGTCCGGATGCCGCTTCA+CGG 0.566054 1.2:+52295699 MS.gene97690:CDS
TGAGGCTGTTAAAGCTTGAG+AGG 0.566340 1.2:+52295756 MS.gene97690:CDS
ACGATGGGCCAAGGAACTCC+CGG 0.567566 1.2:+52295557 None:intergenic
GTCATATTATATGGAGAACC+TGG 0.570307 1.2:+52297623 MS.gene97690:CDS
TCCAGATTCCCAACACTCAT+CGG 0.570778 1.2:-52295893 None:intergenic
GATCCAGCTTTGCTACGACC+TGG 0.573418 1.2:+52298743 MS.gene97690:CDS
GCAAGACGAAGTTGATCCAA+TGG 0.579653 1.2:+52297448 MS.gene97690:CDS
TACAGGTATGATGCTCACTC+AGG 0.582791 1.2:+52298608 MS.gene97690:intron
GGAAGAATTTGTTATGACGA+AGG 0.583336 1.2:+52298993 MS.gene97690:CDS
ATTAGCTGATGATGTCAACT+TGG 0.586051 1.2:+52298972 MS.gene97690:CDS
TCCTCCGCCTTCTCCTCCTG+AGG 0.587094 1.2:-52295836 None:intergenic
GTGGAGAACGTGAAATTCAA+AGG 0.587888 1.2:+52298630 MS.gene97690:CDS
GATAAGGATCAATTGGAGCC+TGG 0.591343 1.2:+52295995 MS.gene97690:CDS
ACGGTTACCGACGGTGACTC+CGG 0.591399 1.2:+52295718 MS.gene97690:CDS
AGCTGGCTTACTTGCTCTAA+GGG 0.591923 1.2:+52299056 MS.gene97690:CDS
ATATAGTTCAGGATGTGTAA+GGG 0.593502 1.2:-52297570 None:intergenic
ATACAAAAGTACTTGGGAGA+TGG 0.593824 1.2:+52298361 MS.gene97690:CDS
TCCCGACTTTAAGAAGGCAA+AGG 0.594284 1.2:+52300068 MS.gene97690:CDS
ATTGGCATCAAGCCACCTAA+GGG 0.598240 1.2:+52297599 MS.gene97690:CDS
AGGTATGATGCTCACTCAGG+TGG 0.601443 1.2:+52298611 MS.gene97690:intron
AAAATCCCAACATAATACTC+CGG 0.602001 1.2:-52295962 None:intergenic
TGCCGCTTCACGGTTACCGA+CGG 0.603500 1.2:+52295709 MS.gene97690:CDS
ATTGATGAAATTGATGCGGT+CGG 0.608145 1.2:+52298445 MS.gene97690:CDS
AAGAAAGAAGGAGTGCCAGA+AGG 0.608420 1.2:+52300108 MS.gene97690:CDS
GCAGATTCAGGAAATTAAAG+AGG 0.609731 1.2:+52297535 MS.gene97690:CDS
GTTAAAGCTTGAGAGGGTGA+AGG 0.609846 1.2:+52295763 MS.gene97690:CDS
AGATGGTCCAAAACTTGTGA+GGG 0.610145 1.2:+52298378 MS.gene97690:CDS
CACCGTCGGTAACCGTGAAG+CGG 0.611205 1.2:-52295711 None:intergenic
TATAGTTCAGGATGTGTAAG+GGG 0.615490 1.2:-52297569 None:intergenic
AGTTTGTTGCGTATCAAGAG+AGG 0.615599 1.2:+52295807 MS.gene97690:CDS
CCCGGTGACCGGAAACAAGA+CGG 0.618125 1.2:+52295602 MS.gene97690:CDS
CTCAGTCATGAAAGTCGAGA+AGG 0.618736 1.2:+52297472 MS.gene97690:CDS
GCAGCACCACCGGCGCGTGT+AGG 0.619998 1.2:+52295656 MS.gene97690:CDS
GAAGCCTCAGGAGGAGAAGG+CGG 0.620796 1.2:+52295832 MS.gene97690:CDS
CCCGGCGGCATGAACCGACA+AGG 0.629868 1.2:+52295575 MS.gene97690:CDS
TGGCATCAAGCCACCTAAGG+GGG 0.630368 1.2:+52297601 MS.gene97690:CDS
TGCATCAAAATAGCACAACC+AGG 0.642077 1.2:-52296013 None:intergenic
ATCTTCCTATCAATACGACC+AGG 0.647291 1.2:-52298761 None:intergenic
TTACGACCTACACGCGCCGG+TGG 0.648178 1.2:-52295662 None:intergenic
GAGATGGTCCAAAACTTGTG+AGG 0.650908 1.2:+52298377 MS.gene97690:CDS
CGGTATCGAAGTGCAAGCTG+AGG 0.651265 1.2:+52295738 MS.gene97690:CDS
TGTTTACGACCTACACGCGC+CGG 0.657461 1.2:-52295665 None:intergenic
TTCGATACCGGAGTCACCGT+CGG 0.658712 1.2:-52295725 None:intergenic
AGAGAGGTTGAAGCCTCAGG+AGG 0.663698 1.2:+52295823 MS.gene97690:CDS
TTTCATTGATGAAATTGATG+CGG 0.663748 1.2:+52298441 MS.gene97690:CDS
AATAGCAGGAGAAAGATCAT+CGG 0.664706 1.2:-52298416 None:intergenic
ATGTCAGCATAAGATTCCAA+AGG 0.668551 1.2:-52297497 None:intergenic
TTGATGCGGTCGGTACAAAG+AGG 0.668806 1.2:+52298455 MS.gene97690:CDS
GAGGCTGTTAAAGCTTGAGA+GGG 0.670530 1.2:+52295757 MS.gene97690:CDS
GAATTGATACAAAAGTACTT+GGG 0.673200 1.2:+52298355 MS.gene97690:CDS
TTGGCATCAAGCCACCTAAG+GGG 0.701914 1.2:+52297600 MS.gene97690:CDS
GATGAGTGTTGGGAATCTGG+AGG 0.708876 1.2:+52295895 MS.gene97690:CDS
ATGGGCCAAGGAACTCCCGG+CGG 0.773777 1.2:+52295560 MS.gene97690:CDS
TCTAAGGTTGATGATCTACG+TGG 0.778964 1.2:+52295866 MS.gene97690:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAATTAATAAATAAATCG+TGG + chr1.2:52299616-52299635 MS.gene97690:intron 10.0%
!!! AACATAATTTTTTTCATTTT+TGG + chr1.2:52297902-52297921 MS.gene97690:intron 10.0%
!! AATAGTAAGATATCATAAAT+TGG - chr1.2:52300021-52300040 None:intergenic 15.0%
!! ATTTATATACAGCATTTATT+GGG + chr1.2:52299321-52299340 MS.gene97690:intron 15.0%
!! GAAATATTCTTTATAGAATT+AGG + chr1.2:52297335-52297354 MS.gene97690:intron 15.0%
!! TAAAAAAACATAAGATTGAT+AGG - chr1.2:52299943-52299962 None:intergenic 15.0%
!! TATTTATATACAGCATTTAT+TGG + chr1.2:52299320-52299339 MS.gene97690:intron 15.0%
!! TTTCAAAAAAGAGATTATAA+GGG + chr1.2:52296204-52296223 MS.gene97690:intron 15.0%
!!! ATAAATTTTTAACCTTCATT+CGG - chr1.2:52299086-52299105 None:intergenic 15.0%
!!! ATTATGATTGATTTTTTATC+AGG + chr1.2:52297403-52297422 MS.gene97690:intron 15.0%
!!! CATTATGATTTTGATTATAA+GGG + chr1.2:52296172-52296191 MS.gene97690:intron 15.0%
!!! CTTATTTTCATAAATTCTTT+AGG + chr1.2:52296333-52296352 MS.gene97690:intron 15.0%
!!! TCAATCTTATGTTTTTTTAA+AGG + chr1.2:52299944-52299963 MS.gene97690:intron 15.0%
!!! TCATTATGATTTTGATTATA+AGG + chr1.2:52296171-52296190 MS.gene97690:intron 15.0%
!!! TGTTGTTTTTATAATTTTGT+TGG + chr1.2:52296113-52296132 MS.gene97690:intron 15.0%
!!! TTGTTTCATCTTTTAATATT+AGG + chr1.2:52299536-52299555 MS.gene97690:intron 15.0%
!!! TTTTATAATTTTGTTGGAAT+TGG + chr1.2:52296119-52296138 MS.gene97690:intron 15.0%
!! AAATTTGAATTGTTGATCTA+GGG + chr1.2:52296073-52296092 MS.gene97690:intron 20.0%
!! ATTTGATACCATACTATAAT+TGG + chr1.2:52297258-52297277 MS.gene97690:intron 20.0%
!! CTGTATATAAATATGAAACT+AGG - chr1.2:52299313-52299332 None:intergenic 20.0%
!! CTTTCAAAAAAGAGATTATA+AGG + chr1.2:52296203-52296222 MS.gene97690:intron 20.0%
!! TATATGAATCCTAAAATTGT+GGG - chr1.2:52298493-52298512 None:intergenic 20.0%
!!! ATAGTTAGAAAAAGTTTTGT+GGG - chr1.2:52299846-52299865 None:intergenic 20.0%
!!! ATGAAAATTAGGAAAAGTTT+TGG + chr1.2:52297310-52297329 MS.gene97690:intron 20.0%
!!! ATTCACTCTAGTTTTATAAA+AGG - chr1.2:52296690-52296709 None:intergenic 20.0%
!!! ATTCACTCTCATTTTATAAA+TGG - chr1.2:52296581-52296600 None:intergenic 20.0%
!!! CTTTTAGTATTAAGACAATA+AGG - chr1.2:52299417-52299436 None:intergenic 20.0%
!!! GATTTTATCTTTTGTTGATA+AGG + chr1.2:52295979-52295998 MS.gene97690:CDS 20.0%
!!! GTTATGGTGATAATTTTTTT+TGG + chr1.2:52299219-52299238 MS.gene97690:intron 20.0%
!!! TAACTATAGTTACATTTTGT+AGG + chr1.2:52299859-52299878 MS.gene97690:intron 20.0%
!!! TATAAACATTTAAGCTGTTT+TGG - chr1.2:52296366-52296385 None:intergenic 20.0%
!!! TATAGTTAGAAAAAGTTTTG+TGG - chr1.2:52299847-52299866 None:intergenic 20.0%
!!! TTCACTCTAGTTTTATAAAA+GGG - chr1.2:52296689-52296708 None:intergenic 20.0%
!!! TTCACTCTCATTTTATAAAT+GGG - chr1.2:52296580-52296599 None:intergenic 20.0%
! AAAAACTAAGTTGTAGTTGT+TGG - chr1.2:52299500-52299519 None:intergenic 25.0%
! AAATTAAGATACACACATCA+AGG + chr1.2:52298944-52298963 MS.gene97690:intron 25.0%
! ACCCAAATATATTATGCTAA+GGG + chr1.2:52299179-52299198 MS.gene97690:intron 25.0%
! AGTAAGATATCATAAATTGG+AGG - chr1.2:52300018-52300037 None:intergenic 25.0%
! ATAACATGTCTATAAGTTGT+TGG + chr1.2:52296309-52296328 MS.gene97690:intron 25.0%
! ATAAGATTGATAGGTAAAGA+TGG - chr1.2:52299934-52299953 None:intergenic 25.0%
! ATAAGCACTTATATGATAAG+CGG + chr1.2:52296400-52296419 MS.gene97690:intron 25.0%
! ATACCATACTATAATTGGTT+TGG + chr1.2:52297263-52297282 MS.gene97690:intron 25.0%
! CAAATTATACAGACAATAAC+AGG - chr1.2:52297366-52297385 None:intergenic 25.0%
! CAATTAAACTCATGAATGTA+AGG - chr1.2:52298577-52298596 None:intergenic 25.0%
! CTATATGAATCCTAAAATTG+TGG - chr1.2:52298494-52298513 None:intergenic 25.0%
! GAAATTTGAATTGTTGATCT+AGG + chr1.2:52296072-52296091 MS.gene97690:intron 25.0%
! GTTTGATGTAACTAAAGTAT+GGG + chr1.2:52296491-52296510 MS.gene97690:intron 25.0%
! TAAGATTGATAGGTAAAGAT+GGG - chr1.2:52299933-52299952 None:intergenic 25.0%
! TAATTGTTAATATGCCTTAC+AGG + chr1.2:52298591-52298610 MS.gene97690:intron 25.0%
! TATAAAACTAGAGTGAATTG+AGG + chr1.2:52296692-52296711 MS.gene97690:intron 25.0%
! TATAAAATGAGAGTGAATTG+AGG + chr1.2:52296583-52296602 MS.gene97690:intron 25.0%
! TCTAATAAGCCAAAAAGATA+CGG - chr1.2:52296468-52296487 None:intergenic 25.0%
! TGATTCACTGAAGTAAAAAT+TGG - chr1.2:52299907-52299926 None:intergenic 25.0%
! TGTTTGATGTAACTAAAGTA+TGG + chr1.2:52296490-52296509 MS.gene97690:intron 25.0%
! TTATAGAATTAGCTATCTCT+AGG + chr1.2:52296858-52296877 MS.gene97690:intron 25.0%
! TTTCATTGATGAAATTGATG+CGG + chr1.2:52298441-52298460 MS.gene97690:CDS 25.0%
!! GACTTATTTGAGTTTACTTT+GGG + chr1.2:52296239-52296258 MS.gene97690:intron 25.0%
!! GATAAATACTGTATTGATAC+TGG + chr1.2:52298020-52298039 MS.gene97690:intron 25.0%
!! GATTTGTCTGTATTATCTTT+TGG + chr1.2:52299966-52299985 MS.gene97690:intron 25.0%
!! TACCATACTATAATTGGTTT+GGG + chr1.2:52297264-52297283 MS.gene97690:intron 25.0%
!! TGACTTATTTGAGTTTACTT+TGG + chr1.2:52296238-52296257 MS.gene97690:intron 25.0%
!! TTAAGTTGTTTATCCAAACA+AGG + chr1.2:52296442-52296461 MS.gene97690:intron 25.0%
!!! AATTTTAGGATTCATATAGG+TGG + chr1.2:52298495-52298514 MS.gene97690:intron 25.0%
!!! ATGGTGATAATTTTTTTTGG+AGG + chr1.2:52299222-52299241 MS.gene97690:intron 25.0%
!!! ATTGCTTTTATATCTTGTTC+AGG + chr1.2:52300038-52300057 MS.gene97690:intron 25.0%
!!! ATTTTAGGATTCATATAGGT+GGG + chr1.2:52298496-52298515 MS.gene97690:intron 25.0%
!!! CACAATTTTAGGATTCATAT+AGG + chr1.2:52298492-52298511 MS.gene97690:intron 25.0%
!!! GAATTGATACAAAAGTACTT+GGG + chr1.2:52298355-52298374 MS.gene97690:CDS 25.0%
!!! GATTTTTTATCAGGTTCTAT+CGG + chr1.2:52297412-52297431 MS.gene97690:intron 25.0%
!!! TGAATTGATACAAAAGTACT+TGG + chr1.2:52298354-52298373 MS.gene97690:CDS 25.0%
!!! TGCTATTTTGATGCATAATA+AGG + chr1.2:52296021-52296040 MS.gene97690:CDS 25.0%
!!! TTGTTTACAATGTTACTTTC+TGG + chr1.2:52297821-52297840 MS.gene97690:intron 25.0%
!!! TTTTGTTGATAAGGATCAAT+TGG + chr1.2:52295988-52296007 MS.gene97690:CDS 25.0%
AAAATCCCAACATAATACTC+CGG - chr1.2:52295965-52295984 None:intergenic 30.0%
AAGATGAAAATCTCTGAGTT+TGG + chr1.2:52297936-52297955 MS.gene97690:intron 30.0%
AAGCTCATTACTTCTTCAAA+AGG - chr1.2:52297237-52297256 None:intergenic 30.0%
AGATGAAAATCTCTGAGTTT+GGG + chr1.2:52297937-52297956 MS.gene97690:intron 30.0%
AGCAACCTAAAAAATTTGCA+TGG + chr1.2:52299388-52299407 MS.gene97690:intron 30.0%
ATACAGCATTTATTGGGTTA+GGG + chr1.2:52299327-52299346 MS.gene97690:intron 30.0%
ATATAGTTCAGGATGTGTAA+GGG - chr1.2:52297573-52297592 None:intergenic 30.0%
ATCAAGACTTTCAATTCTGT+TGG - chr1.2:52298726-52298745 None:intergenic 30.0%
ATTATCAGATCTGTAGAGTT+TGG + chr1.2:52297773-52297792 MS.gene97690:intron 30.0%
ATTCATCGAAAGGATATGAA+TGG - chr1.2:52296786-52296805 None:intergenic 30.0%
CAAAACTAATCATGTTTACC+TGG - chr1.2:52298829-52298848 None:intergenic 30.0%
CCAATATCTTCATATAGTTC+AGG - chr1.2:52297584-52297603 None:intergenic 30.0%
CCTGAACTATATGAAGATAT+TGG + chr1.2:52297581-52297600 MS.gene97690:CDS 30.0%
GAATCAACAGAAACAACATT+AGG - chr1.2:52298857-52298876 None:intergenic 30.0%
GACCCAAATATATTATGCTA+AGG + chr1.2:52299178-52299197 MS.gene97690:intron 30.0%
GCCCTTAGCATAATATATTT+GGG - chr1.2:52299183-52299202 None:intergenic 30.0%
GGTAACTTGAGTGTATATTT+AGG + chr1.2:52299880-52299899 MS.gene97690:intron 30.0%
GTCAAAACTAGCAAGTTAAT+AGG - chr1.2:52299139-52299158 None:intergenic 30.0%
GTGATGTTTAAGAAGAAAGA+AGG + chr1.2:52300096-52300115 MS.gene97690:CDS 30.0%
TATACAGCATTTATTGGGTT+AGG + chr1.2:52299326-52299345 MS.gene97690:intron 30.0%
TCAATAATGAATCAATGCTG+TGG + chr1.2:52297701-52297720 MS.gene97690:intron 30.0%
TCATCAATGAAAACAATAGC+AGG - chr1.2:52298433-52298452 None:intergenic 30.0%
TGCTTCTTACTAATACAACT+TGG - chr1.2:52298142-52298161 None:intergenic 30.0%
TTCATCGAAAGGATATGAAT+GGG - chr1.2:52296785-52296804 None:intergenic 30.0%
TTGAACCTGGAATGAAAATT+AGG + chr1.2:52297299-52297318 MS.gene97690:intron 30.0%
TTGAATCAAAACCATCTAAC+TGG - chr1.2:52298676-52298695 None:intergenic 30.0%
! AACAAAGCATTCTTACAGAA+AGG + chr1.2:52299439-52299458 MS.gene97690:intron 30.0%
! AGAGATTATAAGGGTTTGTT+TGG + chr1.2:52296213-52296232 MS.gene97690:intron 30.0%
! ATTCCTTATGTACTGTTTTG+GGG + chr1.2:52297968-52297987 MS.gene97690:intron 30.0%
! CTTTTCCTAATTTTCATTCC+AGG - chr1.2:52297307-52297326 None:intergenic 30.0%
! GATTCCTTATGTACTGTTTT+GGG + chr1.2:52297967-52297986 MS.gene97690:intron 30.0%
! TGCATATTTAAGATACCACA+TGG - chr1.2:52298879-52298898 None:intergenic 30.0%
! TTAAAGAAGCAGCAGTTTTT+CGG - chr1.2:52298186-52298205 None:intergenic 30.0%
!! ATTTGCTGTTTAATGTAGAC+TGG + chr1.2:52296725-52296744 MS.gene97690:intron 30.0%
!! TTTGCTGTTTAATGTAGACT+GGG + chr1.2:52296726-52296745 MS.gene97690:intron 30.0%
!!! ATAATTTTTTTTGGAGGAGC+TGG + chr1.2:52299228-52299247 MS.gene97690:intron 30.0%
!!! CTCATTTTATAAATGGGTTG+AGG - chr1.2:52296574-52296593 None:intergenic 30.0%
!!! TTAGATGGTTTTGATTCAAG+AGG + chr1.2:52298677-52298696 MS.gene97690:CDS 30.0%
!!! TTTTAGGATTCATATAGGTG+GGG + chr1.2:52298497-52298516 MS.gene97690:intron 30.0%
AAGCGCATAAATTCATCGAA+AGG - chr1.2:52296796-52296815 None:intergenic 35.0%
AAGTGCTTGTTTGATTCTAC+TGG + chr1.2:52299751-52299770 MS.gene97690:intron 35.0%
AAGTTGTAGTTGTTGGAACT+GGG - chr1.2:52299493-52299512 None:intergenic 35.0%
AATAGCAGGAGAAAGATCAT+CGG - chr1.2:52298419-52298438 None:intergenic 35.0%
ACTTCTTCAAAAGGATACGA+AGG - chr1.2:52297228-52297247 None:intergenic 35.0%
AGGAGATGTAAAAGTGATTC+TGG + chr1.2:52298697-52298716 MS.gene97690:CDS 35.0%
AGTGCTTGTTTGATTCTACT+GGG + chr1.2:52299752-52299771 MS.gene97690:intron 35.0%
ATCACTTCATGGACTCTTTA+AGG + chr1.2:52298545-52298564 MS.gene97690:intron 35.0%
ATCCTTTGCCTTCTTAAAGT+CGG - chr1.2:52300073-52300092 None:intergenic 35.0%
ATGAAAATCTCTGAGTTTGG+GGG + chr1.2:52297939-52297958 MS.gene97690:intron 35.0%
ATGTCAGCATAAGATTCCAA+AGG - chr1.2:52297500-52297519 None:intergenic 35.0%
ATTGATGAAATTGATGCGGT+CGG + chr1.2:52298445-52298464 MS.gene97690:CDS 35.0%
CAGAAGGACTATATATGTGA+TGG + chr1.2:52300124-52300143 MS.gene97690:CDS 35.0%
CATATAGTTCAGGATGTGTA+AGG - chr1.2:52297574-52297593 None:intergenic 35.0%
CGCCCTTAGCATAATATATT+TGG - chr1.2:52299184-52299203 None:intergenic 35.0%
CGTAAACAACGCAAACAAAA+GGG + chr1.2:52295680-52295699 MS.gene97690:CDS 35.0%
CTCAGATATCCTGTCAATAT+AGG - chr1.2:52299782-52299801 None:intergenic 35.0%
CTCCCAAACCAATTATAGTA+TGG - chr1.2:52297269-52297288 None:intergenic 35.0%
GATGAAAATCTCTGAGTTTG+GGG + chr1.2:52297938-52297957 MS.gene97690:intron 35.0%
GATGTAACTAAAGTATGGGA+GGG + chr1.2:52296495-52296514 MS.gene97690:intron 35.0%
GCAGATTCAGGAAATTAAAG+AGG + chr1.2:52297535-52297554 MS.gene97690:CDS 35.0%
GTCATATTATATGGAGAACC+TGG + chr1.2:52297623-52297642 MS.gene97690:CDS 35.0%
GTTTAATGTAGACTGGGAAT+GGG + chr1.2:52296732-52296751 MS.gene97690:intron 35.0%
TAAGTTGTAGTTGTTGGAAC+TGG - chr1.2:52299494-52299513 None:intergenic 35.0%
TATAGTTCAGGATGTGTAAG+GGG - chr1.2:52297572-52297591 None:intergenic 35.0%
TCGTAAACAACGCAAACAAA+AGG + chr1.2:52295679-52295698 MS.gene97690:CDS 35.0%
TGATCCAAAAGAACAAAAGC+AGG - chr1.2:52299676-52299695 None:intergenic 35.0%
TGATGCATTGTATCACTTCA+TGG + chr1.2:52298534-52298553 MS.gene97690:intron 35.0%
TGATGTAACTAAAGTATGGG+AGG + chr1.2:52296494-52296513 MS.gene97690:intron 35.0%
TGTTTAATGTAGACTGGGAA+TGG + chr1.2:52296731-52296750 MS.gene97690:intron 35.0%
TGTTTAATGTGACTGGGAAT+GGG + chr1.2:52297154-52297173 MS.gene97690:intron 35.0%
TTGGAATCTTATGCTGACAT+TGG + chr1.2:52297500-52297519 MS.gene97690:CDS 35.0%
! AAAAGTTCCCTCACAAGTTT+TGG - chr1.2:52298388-52298407 None:intergenic 35.0%
! AACAAGAAGACGTATTTTCC+AGG + chr1.2:52298808-52298827 MS.gene97690:CDS 35.0%
! ATTAGCTGATGATGTCAACT+TGG + chr1.2:52298972-52298991 MS.gene97690:CDS 35.0%
! GAAGGATTATTTGTTGATGG+AGG + chr1.2:52295781-52295800 MS.gene97690:CDS 35.0%
! GGATTCCTTATGTACTGTTT+TGG + chr1.2:52297966-52297985 MS.gene97690:intron 35.0%
! GGTGAAGGATTATTTGTTGA+TGG + chr1.2:52295778-52295797 MS.gene97690:CDS 35.0%
! TTTAGGATTCATATAGGTGG+GGG + chr1.2:52298498-52298517 MS.gene97690:intron 35.0%
!! AGCACTTTTTATTCTGACAC+TGG - chr1.2:52299738-52299757 None:intergenic 35.0%
!! AGTTGCTGTTTAATGTGACT+GGG + chr1.2:52297148-52297167 MS.gene97690:intron 35.0%
!! ATACAAAAGTACTTGGGAGA+TGG + chr1.2:52298361-52298380 MS.gene97690:CDS 35.0%
!! ATTCTCTGGAGCTGATATAA+AGG + chr1.2:52299020-52299039 MS.gene97690:CDS 35.0%
!! GCATGTCTTGACTTTAGAAT+GGG + chr1.2:52299808-52299827 MS.gene97690:intron 35.0%
!! GGAAGAATTTGTTATGACGA+AGG + chr1.2:52298993-52299012 MS.gene97690:CDS 35.0%
!! TAGTTGCTGTTTAATGTGAC+TGG + chr1.2:52297147-52297166 MS.gene97690:intron 35.0%
!! TCATGCTATTGTTTCGAGTT+CGG + chr1.2:52295934-52295953 MS.gene97690:CDS 35.0%
!! TTCCTTATGTACTGTTTTGG+GGG + chr1.2:52297969-52297988 MS.gene97690:intron 35.0%
!! TTGTTTCTGTTGATTCCATG+TGG + chr1.2:52298861-52298880 MS.gene97690:intron 35.0%
!!! CGTCTTCTTGTTTTGATATC+AGG - chr1.2:52298800-52298819 None:intergenic 35.0%
!!! CTTGTTTTGATATCAGGAAG+AGG - chr1.2:52298794-52298813 None:intergenic 35.0%
!!! GGATGCCATGCAAATTTTTT+AGG - chr1.2:52299396-52299415 None:intergenic 35.0%
AAAAACATGCACACTCGCAA+AGG - chr1.2:52298073-52298092 None:intergenic 40.0%
AAGGCAATATGTACTGAAGC+TGG + chr1.2:52299039-52299058 MS.gene97690:CDS 40.0%
ACTAGAGTGAATTGAGGCAT+CGG + chr1.2:52296698-52296717 MS.gene97690:intron 40.0%
ACTTTCATGACTGAGACCAT+TGG - chr1.2:52297467-52297486 None:intergenic 40.0%
AGACTGTTTGAGGGAGATTA+TGG + chr1.2:52296277-52296296 MS.gene97690:intron 40.0%
AGATGGTCCAAAACTTGTGA+GGG + chr1.2:52298378-52298397 MS.gene97690:CDS 40.0%
AGTTCAAACCTTTGCAAGCA+AGG - chr1.2:52297660-52297679 None:intergenic 40.0%
ATATTATGCTAAGGGCGAGT+TGG + chr1.2:52299187-52299206 MS.gene97690:intron 40.0%
ATCATCATACTTTCCCGCAA+GGG + chr1.2:52299692-52299711 MS.gene97690:intron 40.0%
ATCTTCCTATCAATACGACC+AGG - chr1.2:52298764-52298783 None:intergenic 40.0%
ATGACGAAGGATGAATTCTC+TGG + chr1.2:52299006-52299025 MS.gene97690:CDS 40.0%
CAAAAGAACAAAAGCAGGCT+TGG - chr1.2:52299671-52299690 None:intergenic 40.0%
CATCACATGCACTATCAGTT+AGG + chr1.2:52298258-52298277 MS.gene97690:intron 40.0%
CCATATAATATGACCCCCTT+AGG - chr1.2:52297617-52297636 None:intergenic 40.0%
CCTAAGGGGGTCATATTATA+TGG + chr1.2:52297614-52297633 MS.gene97690:CDS 40.0%
CTGTTTAATGTGACTGGGAA+TGG + chr1.2:52297153-52297172 MS.gene97690:intron 40.0%
GAATCTTATGCTGACATTGG+TGG + chr1.2:52297503-52297522 MS.gene97690:CDS 40.0%
GTGGAGAACGTGAAATTCAA+AGG + chr1.2:52298630-52298649 MS.gene97690:CDS 40.0%
TATAATATGACCCCCTTAGG+TGG - chr1.2:52297614-52297633 None:intergenic 40.0%
TATTATGCTAAGGGCGAGTT+GGG + chr1.2:52299188-52299207 MS.gene97690:intron 40.0%
TCCTTTGCCTTCTTAAAGTC+GGG - chr1.2:52300072-52300091 None:intergenic 40.0%
TGAAAATCTCTGAGTTTGGG+GGG + chr1.2:52297940-52297959 MS.gene97690:intron 40.0%
TGCATCAAAATAGCACAACC+AGG - chr1.2:52296016-52296035 None:intergenic 40.0%
TTATATGGAGAACCTGGAAC+AGG + chr1.2:52297629-52297648 MS.gene97690:CDS 40.0%
! CAAACAAGGCCGTATCTTTT+TGG + chr1.2:52296456-52296475 MS.gene97690:intron 40.0%
! CTAACTGATAGTGCATGTGA+TGG - chr1.2:52298260-52298279 None:intergenic 40.0%
! GAGCATCTGAATTTTGAACC+TGG + chr1.2:52297286-52297305 MS.gene97690:intron 40.0%
! GCTATTTGTCTGTTGCTTAC+AGG + chr1.2:52297858-52297877 MS.gene97690:intron 40.0%
! GGCATGTCTTGACTTTAGAA+TGG + chr1.2:52299807-52299826 MS.gene97690:intron 40.0%
! TATCAGGTTCTATCGGTTGT+TGG + chr1.2:52297419-52297438 MS.gene97690:intron 40.0%
!! AAATCGTGGAAAGTACTCCT+TGG + chr1.2:52299630-52299649 MS.gene97690:intron 40.0%
!! AGTTTGTTGCGTATCAAGAG+AGG + chr1.2:52295807-52295826 MS.gene97690:CDS 40.0%
!! CAAAAAGACAAGGCCTTGTT+TGG - chr1.2:52297020-52297039 None:intergenic 40.0%
!! CAAAAAGATACGGCCTTGTT+TGG - chr1.2:52296458-52296477 None:intergenic 40.0%
!! CAAACAAGGCCTTGTCTTTT+TGG + chr1.2:52297018-52297037 MS.gene97690:intron 40.0%
!! CAAGCCTGCTTTTGTTCTTT+TGG + chr1.2:52299669-52299688 MS.gene97690:intron 40.0%
!! CTATTGTTTCGAGTTCGGTT+GGG + chr1.2:52295939-52295958 MS.gene97690:CDS 40.0%
!! TCTAAGGTTGATGATCTACG+TGG + chr1.2:52295866-52295885 MS.gene97690:CDS 40.0%
!! TGTTGCTTACAGGTACTGAA+GGG + chr1.2:52297868-52297887 MS.gene97690:intron 40.0%
ACAACGCAAACAAAAGGGTC+CGG + chr1.2:52295685-52295704 MS.gene97690:CDS 45.0%
AGGAAAGACCTTGCTTGCAA+AGG + chr1.2:52297649-52297668 MS.gene97690:CDS 45.0%
ATACATGCTCTTGTGCCTTC+AGG + chr1.2:52298285-52298304 MS.gene97690:intron 45.0%
ATTAGTCGCGAGACTGTTTG+AGG + chr1.2:52296267-52296286 MS.gene97690:intron 45.0%
ATTATGCTAAGGGCGAGTTG+GGG + chr1.2:52299189-52299208 MS.gene97690:intron 45.0%
ATTGGCATCAAGCCACCTAA+GGG + chr1.2:52297599-52297618 MS.gene97690:CDS 45.0%
CACCCCCAAAACAGTACATA+AGG - chr1.2:52297974-52297993 None:intergenic 45.0%
CTAAAGTCAAGACATGCCTC+AGG - chr1.2:52299805-52299824 None:intergenic 45.0%
CTCAGTCATGAAAGTCGAGA+AGG + chr1.2:52297472-52297491 MS.gene97690:CDS 45.0%
CTGGGTAGTCCTATATTGAC+AGG + chr1.2:52299770-52299789 MS.gene97690:intron 45.0%
GAGATGGTCCAAAACTTGTG+AGG + chr1.2:52298377-52298396 MS.gene97690:CDS 45.0%
GAGGCTGTTAAAGCTTGAGA+GGG + chr1.2:52295757-52295776 MS.gene97690:CDS 45.0%
GAGTGAGCATCATACCTGTA+AGG - chr1.2:52298608-52298627 None:intergenic 45.0%
GAGTTGCTGAACCAGTTAGA+TGG + chr1.2:52298662-52298681 MS.gene97690:CDS 45.0%
GATAAGGATCAATTGGAGCC+TGG + chr1.2:52295995-52296014 MS.gene97690:CDS 45.0%
GATCAACTTCGTCTTGCAGA+AGG - chr1.2:52297445-52297464 None:intergenic 45.0%
GATCATCATACTTTCCCGCA+AGG + chr1.2:52299691-52299710 MS.gene97690:intron 45.0%
GCTAACGAGCCAAAAAGACA+AGG - chr1.2:52297030-52297049 None:intergenic 45.0%
GCTACATTCTTGCGTGTAGT+AGG + chr1.2:52298328-52298347 MS.gene97690:CDS 45.0%
GGAGGGTTGAGAATTAAGAG+TGG + chr1.2:52296512-52296531 MS.gene97690:intron 45.0%
GTTAAAGCTTGAGAGGGTGA+AGG + chr1.2:52295763-52295782 MS.gene97690:CDS 45.0%
TACAGGTATGATGCTCACTC+AGG + chr1.2:52298608-52298627 MS.gene97690:intron 45.0%
TACCAGCCACACTGTAATTG+CGG + chr1.2:52296823-52296842 MS.gene97690:intron 45.0%
TAGTTGTTGGAACTGGGAAG+AGG - chr1.2:52299487-52299506 None:intergenic 45.0%
TATTGGCATCAAGCCACCTA+AGG + chr1.2:52297598-52297617 MS.gene97690:CDS 45.0%
TCCAGATTCCCAACACTCAT+CGG - chr1.2:52295896-52295915 None:intergenic 45.0%
TCTCAACCGCAATTACAGTG+TGG - chr1.2:52296832-52296851 None:intergenic 45.0%
TGAGGCTGTTAAAGCTTGAG+AGG + chr1.2:52295756-52295775 MS.gene97690:CDS 45.0%
TGGTTTAGATGCGCAGATTC+AGG + chr1.2:52297523-52297542 MS.gene97690:CDS 45.0%
TTAGTCGCGAGACTGTTTGA+GGG + chr1.2:52296268-52296287 MS.gene97690:intron 45.0%
! AAGCTGGCTTACTTGCTCTA+AGG + chr1.2:52299055-52299074 MS.gene97690:CDS 45.0%
! ACAGTTTGCTCTTCTGTCTG+TGG + chr1.2:52298106-52298125 MS.gene97690:intron 45.0%
! AGCTGGCTTACTTGCTCTAA+GGG + chr1.2:52299056-52299075 MS.gene97690:CDS 45.0%
! ATTGGGTTAGGGTTGTCTGT+GGG + chr1.2:52299338-52299357 MS.gene97690:intron 45.0%
! GACTCATCCCGACTTTAAGA+AGG + chr1.2:52300062-52300081 MS.gene97690:CDS 45.0%
! GCAAGACGAAGTTGATCCAA+TGG + chr1.2:52297448-52297467 MS.gene97690:CDS 45.0%
! GCTGCTGAACCCACAATTTT+AGG + chr1.2:52298481-52298500 MS.gene97690:intron 45.0%
! TACGACCTGGTCGTATTGAT+AGG + chr1.2:52298756-52298775 MS.gene97690:CDS 45.0%
! TATTGGGTTAGGGTTGTCTG+TGG + chr1.2:52299337-52299356 MS.gene97690:intron 45.0%
! TCCCGACTTTAAGAAGGCAA+AGG + chr1.2:52300068-52300087 MS.gene97690:CDS 45.0%
! TGCTGTTTGAGAGTTGAGAG+CGG + chr1.2:52296619-52296638 MS.gene97690:intron 45.0%
! TTGGGCCGGAGTATTATGTT+GGG + chr1.2:52295957-52295976 MS.gene97690:CDS 45.0%
!! AAGAAAGAAGGAGTGCCAGA+AGG + chr1.2:52300108-52300127 MS.gene97690:CDS 45.0%
!! CTGTTGCTTACAGGTACTGA+AGG + chr1.2:52297867-52297886 MS.gene97690:intron 45.0%
!! GCTATTGTTTCGAGTTCGGT+TGG + chr1.2:52295938-52295957 MS.gene97690:CDS 45.0%
!!! CTTATGTACTGTTTTGGGGG+TGG + chr1.2:52297972-52297991 MS.gene97690:intron 45.0%
!!! GCAGGCTTGGTGTTTTAAAG+AGG - chr1.2:52299658-52299677 None:intergenic 45.0%
!!! GGTGTTTTAAAGAGGCACCA+AGG - chr1.2:52299650-52299669 None:intergenic 45.0%
AACCGCAATTACAGTGTGGC+TGG - chr1.2:52296828-52296847 None:intergenic 50.0%
ACACTGGAATCCTCCCAGTT+GGG - chr1.2:52299722-52299741 None:intergenic 50.0%
AGCAAGGTCTTTCCTGTTCC+AGG - chr1.2:52297644-52297663 None:intergenic 50.0%
AGGTATGATGCTCACTCAGG+TGG + chr1.2:52298611-52298630 MS.gene97690:intron 50.0%
ATCTCTGAGTTTGGGGGGAT+TGG + chr1.2:52297945-52297964 MS.gene97690:intron 50.0%
ATGCAGCGCAACTGAAGTGT+GGG + chr1.2:52297058-52297077 MS.gene97690:intron 50.0%
CTCAGCTTGCACTTCGATAC+CGG - chr1.2:52295740-52295759 None:intergenic 50.0%
GAAAGTCGAGAAGGCTCCTT+TGG + chr1.2:52297481-52297500 MS.gene97690:CDS 50.0%
GGCGGAGGAAGATAGATCTA+AGG + chr1.2:52295850-52295869 MS.gene97690:CDS 50.0%
TAGACTGGGAATGGGAGTTG+TGG + chr1.2:52296740-52296759 MS.gene97690:intron 50.0%
TCAAGAGAGGTTGAAGCCTC+AGG + chr1.2:52295820-52295839 MS.gene97690:CDS 50.0%
TCATACTTTCCCGCAAGGGA+TGG + chr1.2:52299696-52299715 MS.gene97690:intron 50.0%
TCTAAGGGAACGCCGAATGA+AGG + chr1.2:52299071-52299090 MS.gene97690:CDS 50.0%
TGACAGGATATCTGAGCCTG+AGG + chr1.2:52299786-52299805 MS.gene97690:intron 50.0%
TTGAGTTTGCCACAGCCTGA+AGG - chr1.2:52298303-52298322 None:intergenic 50.0%
TTGATGCGGTCGGTACAAAG+AGG + chr1.2:52298455-52298474 MS.gene97690:CDS 50.0%
TTGGCATCAAGCCACCTAAG+GGG + chr1.2:52297600-52297619 MS.gene97690:CDS 50.0%
TTGTTGGAACTGGGAAGAGG+TGG - chr1.2:52299484-52299503 None:intergenic 50.0%
! GTTGGGCCGGAGTATTATGT+TGG + chr1.2:52295956-52295975 MS.gene97690:CDS 50.0%
!! GAGTTGGGGTGGATTGGTTA+TGG + chr1.2:52299203-52299222 MS.gene97690:intron 50.0%
!! GATGAGTGTTGGGAATCTGG+AGG + chr1.2:52295895-52295914 MS.gene97690:CDS 50.0%
!! GGACGGTTGAGAGTTGATAG+TGG + chr1.2:52297079-52297098 MS.gene97690:intron 50.0%
!! TATCGCTGCCGTCTTGTTTC+CGG - chr1.2:52295613-52295632 None:intergenic 50.0%
AGAGAGGTTGAAGCCTCAGG+AGG + chr1.2:52295823-52295842 MS.gene97690:CDS 55.0%
AGCGCAACTGAAGTGTGGGA+CGG + chr1.2:52297062-52297081 MS.gene97690:intron 55.0%
ATGAACCGACAAGGCCATCC+CGG + chr1.2:52295584-52295603 MS.gene97690:CDS 55.0%
ATTCGAACCAGCAGCACCAC+CGG + chr1.2:52295646-52295665 MS.gene97690:CDS 55.0%
GACACTGGAATCCTCCCAGT+TGG - chr1.2:52299723-52299742 None:intergenic 55.0%
GATCCAGCTTTGCTACGACC+TGG + chr1.2:52298743-52298762 MS.gene97690:CDS 55.0%
GATGCAGCGCAACTGAAGTG+TGG + chr1.2:52297057-52297076 MS.gene97690:intron 55.0%
GTTAGGGTTGTCTGTGGGTG+TGG + chr1.2:52299343-52299362 MS.gene97690:intron 55.0%
GTTGAAGCCTCAGGAGGAGA+AGG + chr1.2:52295829-52295848 MS.gene97690:CDS 55.0%
TGGCATCAAGCCACCTAAGG+GGG + chr1.2:52297601-52297620 MS.gene97690:CDS 55.0%
TGTTTACGACCTACACGCGC+CGG - chr1.2:52295668-52295687 None:intergenic 55.0%
TTCGATACCGGAGTCACCGT+CGG - chr1.2:52295728-52295747 None:intergenic 55.0%
! CGGTATCGAAGTGCAAGCTG+AGG + chr1.2:52295738-52295757 MS.gene97690:CDS 55.0%
!! GCCGATGAGTGTTGGGAATC+TGG + chr1.2:52295892-52295911 MS.gene97690:CDS 55.0%
!! TGTTTCGAGTTCGGTTGGGC+CGG + chr1.2:52295943-52295962 MS.gene97690:CDS 55.0%
ACGGTTACCGACGGTGACTC+CGG + chr1.2:52295718-52295737 MS.gene97690:CDS 60.0%
CACCGTCGGTAACCGTGAAG+CGG - chr1.2:52295714-52295733 None:intergenic 60.0%
CCCGGTGACCGGAAACAAGA+CGG + chr1.2:52295602-52295621 MS.gene97690:CDS 60.0%
CGACCAGGTCGTAGCAAAGC+TGG - chr1.2:52298749-52298768 None:intergenic 60.0%
CTTGTTTCCGGTCACCGGGA+TGG - chr1.2:52295601-52295620 None:intergenic 60.0%
GAAGCCTCAGGAGGAGAAGG+CGG + chr1.2:52295832-52295851 MS.gene97690:CDS 60.0%
GCTCTTGTGCCTTCAGGCTG+TGG + chr1.2:52298291-52298310 MS.gene97690:intron 60.0%
GGTAACCGTGAAGCGGCATC+CGG - chr1.2:52295707-52295726 None:intergenic 60.0%
GTGACTGGGAATGGGAGTCG+AGG + chr1.2:52297162-52297181 MS.gene97690:intron 60.0%
GTGGCTCGCCGATGAGTGTT+GGG + chr1.2:52295885-52295904 MS.gene97690:CDS 60.0%
! AAGGGCGAGTTGGGGTGGAT+TGG + chr1.2:52299197-52299216 MS.gene97690:intron 60.0%
! ATGCTAAGGGCGAGTTGGGG+TGG + chr1.2:52299192-52299211 MS.gene97690:intron 60.0%
! TGCCGCTTCACGGTTACCGA+CGG + chr1.2:52295709-52295728 MS.gene97690:CDS 60.0%
!! CCGTCTTGTTTCCGGTCACC+GGG - chr1.2:52295605-52295624 None:intergenic 60.0%
!! GCCGTCTTGTTTCCGGTCAC+CGG - chr1.2:52295606-52295625 None:intergenic 60.0%
ATGGGCCAAGGAACTCCCGG+CGG + chr1.2:52295560-52295579 MS.gene97690:CDS 65.0%
CAAGGGATGGCCCAACTGGG+AGG + chr1.2:52299709-52299728 MS.gene97690:intron 65.0%
CCAGTTGGGCCATCCCTTGC+GGG - chr1.2:52299708-52299727 None:intergenic 65.0%
CCCAGTTGGGCCATCCCTTG+CGG - chr1.2:52299709-52299728 None:intergenic 65.0%
CCGCAAGGGATGGCCCAACT+GGG + chr1.2:52299706-52299725 MS.gene97690:intron 65.0%
CGTGGCTCGCCGATGAGTGT+TGG + chr1.2:52295884-52295903 MS.gene97690:CDS 65.0%
GACAAGGCCATCCCGGTGAC+CGG + chr1.2:52295591-52295610 MS.gene97690:CDS 65.0%
TCATGCCGCCGGGAGTTCCT+TGG - chr1.2:52295568-52295587 None:intergenic 65.0%
TCCTCCGCCTTCTCCTCCTG+AGG - chr1.2:52295839-52295858 None:intergenic 65.0%
TTACGACCTACACGCGCCGG+TGG - chr1.2:52295665-52295684 None:intergenic 65.0%
! AGGGTCCGGATGCCGCTTCA+CGG + chr1.2:52295699-52295718 MS.gene97690:CDS 65.0%
!! CCTTGTCGGTTCATGCCGCC+GGG - chr1.2:52295578-52295597 None:intergenic 65.0%
!! GCCTTGTCGGTTCATGCCGC+CGG - chr1.2:52295579-52295598 None:intergenic 65.0%
!! GGTCACCGGGATGGCCTTGT+CGG - chr1.2:52295592-52295611 None:intergenic 65.0%
CCCGCAAGGGATGGCCCAAC+TGG + chr1.2:52299705-52299724 MS.gene97690:intron 70.0%
CCCGGCGGCATGAACCGACA+AGG + chr1.2:52295575-52295594 MS.gene97690:CDS 70.0%
GCCTCAGGAGGAGAAGGCGG+AGG + chr1.2:52295835-52295854 MS.gene97690:CDS 70.0%
GCAGCACCACCGGCGCGTGT+AGG + chr1.2:52295656-52295675 MS.gene97690:CDS 75.0%
!! ACACGCGCCGGTGGTGCTGC+TGG - chr1.2:52295656-52295675 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 52295560 52300143 52295560 ID=MS.gene97690
chr1.2 mRNA 52295560 52300143 52295560 ID=MS.gene97690.t1;Parent=MS.gene97690
chr1.2 exon 52295560 52296042 52295560 ID=MS.gene97690.t1.exon1;Parent=MS.gene97690.t1
chr1.2 CDS 52295560 52296042 52295560 ID=cds.MS.gene97690.t1;Parent=MS.gene97690.t1
chr1.2 exon 52297425 52297670 52297425 ID=MS.gene97690.t1.exon2;Parent=MS.gene97690.t1
chr1.2 CDS 52297425 52297670 52297425 ID=cds.MS.gene97690.t1;Parent=MS.gene97690.t1
chr1.2 exon 52298307 52298476 52298307 ID=MS.gene97690.t1.exon3;Parent=MS.gene97690.t1
chr1.2 CDS 52298307 52298476 52298307 ID=cds.MS.gene97690.t1;Parent=MS.gene97690.t1
chr1.2 exon 52298613 52298829 52298613 ID=MS.gene97690.t1.exon4;Parent=MS.gene97690.t1
chr1.2 CDS 52298613 52298829 52298613 ID=cds.MS.gene97690.t1;Parent=MS.gene97690.t1
chr1.2 exon 52298952 52299092 52298952 ID=MS.gene97690.t1.exon5;Parent=MS.gene97690.t1
chr1.2 CDS 52298952 52299092 52298952 ID=cds.MS.gene97690.t1;Parent=MS.gene97690.t1
chr1.2 exon 52300060 52300143 52300060 ID=MS.gene97690.t1.exon6;Parent=MS.gene97690.t1
chr1.2 CDS 52300060 52300143 52300060 ID=cds.MS.gene97690.t1;Parent=MS.gene97690.t1
Gene Sequence

>MS.gene97690

ATGGGCCAAGGAACTCCCGGCGGCATGAACCGACAAGGCCATCCCGGTGACCGGAAACAAGACGGCAGCGATAAAAAAGAAAAGAAATTCGAACCAGCAGCACCACCGGCGCGTGTAGGTCGTAAACAACGCAAACAAAAGGGTCCGGATGCCGCTTCACGGTTACCGACGGTGACTCCGGTATCGAAGTGCAAGCTGAGGCTGTTAAAGCTTGAGAGGGTGAAGGATTATTTGTTGATGGAGGAAGAGTTTGTTGCGTATCAAGAGAGGTTGAAGCCTCAGGAGGAGAAGGCGGAGGAAGATAGATCTAAGGTTGATGATCTACGTGGCTCGCCGATGAGTGTTGGGAATCTGGAGGAATTGATTGATGAGAATCATGCTATTGTTTCGAGTTCGGTTGGGCCGGAGTATTATGTTGGGATTTTATCTTTTGTTGATAAGGATCAATTGGAGCCTGGTTGTGCTATTTTGATGCATAATAAGGTATTTCTAAATTGTTGAATTTTTTGTGTGAAATTTGAATTGTTGATCTAGGGTTTTAATTTAGAGAATATGTTGTTTTTATAATTTTGTTGGAATTGGATGCATATGAAGAAATATATTAAGTTCTATCATTATGATTTTGATTATAAGGGTTTGTTTTCTTTCAAAAAAGAGATTATAAGGGTTTGTTTGGATTGACTTATTTGAGTTTACTTTGGGACATAATTAGTCGCGAGACTGTTTGAGGGAGATTATGGAAACAACTGATAACATGTCTATAAGTTGTTGGACTTATTTTCATAAATTCTTTAGGATAGCTTCCAAAACAGCTTAAATGTTTATATGAAATAGTTATACATAAGCACTTATATGATAAGCGGTTATGCTGCAAGTGTTTAATTAAGTTGTTTATCCAAACAAGGCCGTATCTTTTTGGCTTATTAGATATGTTTGATGTAACTAAAGTATGGGAGGGTTGAGAATTAAGAGTGGAGTTTTAACTCAATTATTAGAATCTGACTCGCAATTCCTCAACCCATTTATAAAATGAGAGTGAATTGAGGCATCAGAGTAATTTGCTGTTTGAGAGTTGAGAGCGGAGTTTTAACTCTCAATTATTAGAATTTGACTCGCAATTTCTCAACCCTTTTATAAAACTAGAGTGAATTGAGGCATCGGAGTAATTTGCTGTTTAATGTAGACTGGGAATGGGAGTTGTGGAGAATTGTATAATAATATACCCATTCATATCCTTTCGATGAATTTATGCGCTTTACGTGATACCAGCCACACTGTAATTGCGGTTGAGACATTCTTTATAGAATTAGCTATCTCTAGGATAGCTTACAAAACAGCTTATAGTTTATATGAAAACAATTATACTTTATTTTATCTTTTGTTATTGAAATAGCATATATATTTAAGCACAAATGTGATAAACGCATATGCTATAAGCACTTAATTAAGTTGTTTATCCAAACAAGGCCTTGTCTTTTTGGCTCGTTAGCTATGTGTGATGCAGCGCAACTGAAGTGTGGGACGGTTGAGAGTTGATAGTGGACTTTAACTCAATTGTTAGACTTTGACTCACATTTTCAATCAGAGTAGTTGCTGTTTAATGTGACTGGGAATGGGAGTCGAGGAGAATTGTCTAATAATATACTCATTGTATGATCAAAGAAGCCTTCGTATCCTTTTGAAGAAGTAATGAGCTTAATTTGATACCATACTATAATTGGTTTGGGAGCATCTGAATTTTGAACCTGGAATGAAAATTAGGAAAAGTTTTGGTTGAAATATTCTTTATAGAATTAGGCATCTCCTGTTATTGTCTGTATAATTTGATCTAGATGATATGATGATTATGATTGATTTTTTATCAGGTTCTATCGGTTGTTGGCCTTCTGCAAGACGAAGTTGATCCAATGGTCTCAGTCATGAAAGTCGAGAAGGCTCCTTTGGAATCTTATGCTGACATTGGTGGTTTAGATGCGCAGATTCAGGAAATTAAAGAGGCAGTTGAGCTACCCCTTACACATCCTGAACTATATGAAGATATTGGCATCAAGCCACCTAAGGGGGTCATATTATATGGAGAACCTGGAACAGGAAAGACCTTGCTTGCAAAGGTTTGAACTTTTTCACTTTGCTTAACTTGTTCAATAATGAATCAATGCTGTGGAATTTATATTGTTTTTCTCTGTTTTACATGTACAAAATAAATTTGTGTGATTATCAGATCTGTAGAGTTTGGAAATGACTTTGTCTGCAATTCTGCATTGTTTACAATGTTACTTTCTGGAGTTCTAGTTATTTGCTATTTGTCTGTTGCTTACAGGTACTGAAGGGAATTTTGTAAGAACATAATTTTTTTCATTTTTGGATATTAAGATTAAGATGAAAATCTCTGAGTTTGGGGGGATTGGATTCCTTATGTACTGTTTTGGGGGTGGTTTTACTGCAGACACATTTAAAGATGATAAATACTGTATTGATACTGGTGACATATGTTGCAATGTCGTTTTCATCCTTTGCGAGTGTGCATGTTTTTAAAAAATTAGAATACAGTTTGCTCTTCTGTCTGTGGTTGTCAGACACCAAGTTGTATTAGTAAGAAGCAACTGATCTGAAGAAAAAGCAACCGAAAAACTGCTGCTTCTTTAAATAATTACTAAGTTCGTATATTATATTTTTTATTGCTTGTAATTTGTCACACCATCACATGCACTATCAGTTAGGTCTAATACATGCTCTTGTGCCTTCAGGCTGTGGCAAACTCAACATCAGCTACATTCTTGCGTGTAGTAGGTAGTGAATTGATACAAAAGTACTTGGGAGATGGTCCAAAACTTGTGAGGGAACTTTTCAGAGTTGCCGATGATCTTTCTCCTGCTATTGTTTTCATTGATGAAATTGATGCGGTCGGTACAAAGAGGTAAGCTGCTGAACCCACAATTTTAGGATTCATATAGGTGGGGGTGTAGTAGAAGAGTGATGCATTGTATCACTTCATGGACTCTTTAAGGTTTTCTCCTTACATTCATGAGTTTAATTGTTAATATGCCTTACAGGTATGATGCTCACTCAGGTGGAGAACGTGAAATTCAAAGGACTATGTTAGAGTTGCTGAACCAGTTAGATGGTTTTGATTCAAGAGGAGATGTAAAAGTGATTCTGGCTACCAACAGAATTGAAAGTCTTGATCCAGCTTTGCTACGACCTGGTCGTATTGATAGGAAGATTGAATTTCCTCTTCCTGATATCAAAACAAGAAGACGTATTTTCCAGGTAAACATGATTAGTTTTGTGAATCCTAATGTTGTTTCTGTTGATTCCATGTGGTATCTTAAATATGCATATTCTGTTTGATCATGCAACTGAATGACTTTATGCTTGCTTTTTAAATTAAGATACACACATCAAGGATGACATTAGCTGATGATGTCAACTTGGAAGAATTTGTTATGACGAAGGATGAATTCTCTGGAGCTGATATAAAGGCAATATGTACTGAAGCTGGCTTACTTGCTCTAAGGGAACGCCGAATGAAGGTTAAAAATTTATTCACGTTTCTATTGATAATGCTGTTTGTAACCTATTAACTTGCTAGTTTTGACAAGCTCGTTTTTTTAATATGACCCAAATATATTATGCTAAGGGCGAGTTGGGGTGGATTGGTTATGGTGATAATTTTTTTTGGAGGAGCTGGAAAATATTTCTTTGACTATGTATCTGAATTTTGAGACAAGAAAATATTAAGAATGCTGACCTAGTTTCATATTTATATACAGCATTTATTGGGTTAGGGTTGTCTGTGGGTGTGGATATATACAGTTAGTCATTGTAAGCAACCTAAAAAATTTGCATGGCATCCTTATTGTCTTAATACTAAAAGAAAACAAAGCATTCTTACAGAAAGGAAAAACATCGTAGTTTTTTCCACCTCTTCCCAGTTCCAACAACTACAACTTAGTTTTTATTGAAAGAAGTCTGTTTGTTTCATCTTTTAATATTAGGGTGGATAATATGCAAGCAAAAGCAGCATACTCTAATTAAATCAATTCAGCAAATTATTTTAATTAATAAATAAATCGTGGAAAGTACTCCTTGGTGCCTCTTTAAAACACCAAGCCTGCTTTTGTTCTTTTGGATCATCATACTTTCCCGCAAGGGATGGCCCAACTGGGAGGATTCCAGTGTCAGAATAAAAAGTGCTTGTTTGATTCTACTGGGTAGTCCTATATTGACAGGATATCTGAGCCTGAGGCATGTCTTGACTTTAGAATGGGACAACTTGCACTCCCACAAAACTTTTTCTAACTATAGTTACATTTTGTAGGTAACTTGAGTGTATATTTAGGTCCAATTTTTACTTCAGTGAATCAGTTCCCATCTTTACCTATCAATCTTATGTTTTTTTAAAGGATTTGTCTGTATTATCTTTTGGTTTGTACACTTCATTTTAAGTTTGATCCTCCAATTTATGATATCTTACTATTGCTTTTATATCTTGTTCAGGTGACTCATCCCGACTTTAAGAAGGCAAAGGATAAAGTGATGTTTAAGAAGAAAGAAGGAGTGCCAGAAGGACTATATATGTGA
Protein sequence

>MS.gene97690.t1

MGQGTPGGMNRQGHPGDRKQDGSDKKEKKFEPAAPPARVGRKQRKQKGPDAASRLPTVTPVSKCKLRLLKLERVKDYLLMEEEFVAYQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPAIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHPDFKKAKDKVMFKKKEGVPEGLYM