Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86578.t1 | XP_013452551.1 | 87.9 | 438 | 3 | 1 | 1 | 388 | 1 | 438 | 1.20E-170 | 609.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86578.t1 | Q9FNZ2 | 63.1 | 423 | 112 | 4 | 1 | 380 | 3 | 424 | 3.0e-114 | 413.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86578.t1 | A0A072U9U5 | 87.9 | 438 | 3 | 1 | 1 | 388 | 1 | 438 | 8.5e-171 | 609.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene86578.t1 | TF | C3H |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene79299 | MS.gene86578 | PPI |
| MS.gene86578 | MS.gene97690 | PPI |
| MS.gene86578 | MS.gene016240 | PPI |
| MS.gene86578 | MS.gene27556 | PPI |
| MS.gene24037 | MS.gene86578 | PPI |
| MS.gene061878 | MS.gene86578 | PPI |
| MS.gene86578 | MS.gene27773 | PPI |
| MS.gene30824 | MS.gene86578 | PPI |
| MS.gene09870 | MS.gene86578 | PPI |
| MS.gene62770 | MS.gene86578 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86578.t1 | MTR_6g465150 | 87.900 | 438 | 3 | 1 | 1 | 388 | 1 | 438 | 0.0 | 776 |
| MS.gene86578.t1 | MTR_8g028700 | 52.548 | 314 | 145 | 3 | 71 | 380 | 202 | 515 | 2.08e-122 | 364 |
| MS.gene86578.t1 | MTR_8g032850 | 49.240 | 329 | 161 | 3 | 54 | 380 | 576 | 900 | 1.62e-114 | 355 |
| MS.gene86578.t1 | MTR_8g032850 | 44.390 | 205 | 105 | 4 | 72 | 269 | 240 | 442 | 6.58e-49 | 177 |
| MS.gene86578.t1 | MTR_2g101410 | 27.876 | 226 | 134 | 7 | 99 | 295 | 187 | 412 | 2.40e-15 | 77.8 |
| MS.gene86578.t1 | MTR_8g089650 | 26.316 | 228 | 117 | 6 | 79 | 288 | 232 | 426 | 5.63e-13 | 70.5 |
| MS.gene86578.t1 | MTR_1g021590 | 24.746 | 295 | 189 | 12 | 93 | 376 | 105 | 377 | 7.00e-13 | 70.1 |
| MS.gene86578.t1 | MTR_1g021590 | 27.778 | 234 | 141 | 8 | 99 | 307 | 218 | 448 | 6.09e-12 | 67.4 |
| MS.gene86578.t1 | MTR_3g110185 | 28.837 | 215 | 128 | 9 | 99 | 288 | 193 | 407 | 3.90e-12 | 68.6 |
| MS.gene86578.t1 | MTR_4g105700 | 25.177 | 282 | 175 | 12 | 96 | 351 | 398 | 669 | 1.65e-11 | 66.6 |
| MS.gene86578.t1 | MTR_4g068457 | 27.679 | 224 | 130 | 9 | 99 | 292 | 237 | 458 | 3.10e-11 | 65.1 |
| MS.gene86578.t1 | MTR_2g016690 | 25.103 | 243 | 151 | 10 | 97 | 316 | 90 | 324 | 3.98e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86578.t1 | AT4G25440 | 62.796 | 422 | 115 | 3 | 1 | 380 | 3 | 424 | 0.0 | 563 |
| MS.gene86578.t1 | AT4G25440 | 62.796 | 422 | 115 | 3 | 1 | 380 | 3 | 424 | 0.0 | 563 |
| MS.gene86578.t1 | AT4G25440 | 62.796 | 422 | 115 | 3 | 1 | 380 | 3 | 424 | 0.0 | 563 |
| MS.gene86578.t1 | AT5G51980 | 60.690 | 435 | 120 | 4 | 1 | 384 | 1 | 435 | 0.0 | 558 |
| MS.gene86578.t1 | AT5G51980 | 60.690 | 435 | 120 | 4 | 1 | 384 | 1 | 435 | 0.0 | 558 |
| MS.gene86578.t1 | AT5G40880 | 50.154 | 325 | 158 | 3 | 54 | 376 | 114 | 436 | 4.08e-114 | 340 |
| MS.gene86578.t1 | AT5G40880 | 50.154 | 325 | 158 | 3 | 54 | 376 | 143 | 465 | 8.33e-114 | 340 |
| MS.gene86578.t1 | AT5G49200 | 49.038 | 312 | 154 | 3 | 70 | 376 | 101 | 412 | 9.62e-108 | 323 |
| MS.gene86578.t1 | AT1G24530 | 27.727 | 220 | 116 | 6 | 79 | 288 | 215 | 401 | 6.77e-14 | 73.2 |
| MS.gene86578.t1 | AT3G50390 | 22.581 | 279 | 176 | 8 | 136 | 376 | 93 | 369 | 1.27e-13 | 72.4 |
| MS.gene86578.t1 | AT1G24130 | 27.064 | 218 | 131 | 7 | 99 | 288 | 191 | 408 | 1.56e-13 | 72.0 |
| MS.gene86578.t1 | AT1G49040 | 27.203 | 261 | 171 | 7 | 89 | 341 | 888 | 1137 | 8.85e-12 | 67.4 |
| MS.gene86578.t1 | AT1G47610 | 26.636 | 214 | 132 | 6 | 99 | 288 | 134 | 346 | 5.67e-11 | 63.9 |
| MS.gene86578.t1 | AT2G26060 | 24.855 | 346 | 197 | 17 | 93 | 381 | 13 | 352 | 7.48e-11 | 63.5 |
| MS.gene86578.t1 | AT3G18140 | 25.523 | 239 | 151 | 11 | 97 | 316 | 75 | 305 | 9.71e-11 | 62.8 |
Find 98 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCTTACCTTAACAAAAT+TGG | 0.095005 | 6.1:-51529359 | None:intergenic |
| CCCACTTTATTGCACGTTAT+TGG | 0.189410 | 6.1:-51531748 | None:intergenic |
| GAGCCAGCTGCATCACTTAA+AGG | 0.244802 | 6.1:+51529967 | MS.gene86578:CDS |
| TGGTGATGTCTGTTCTTTGC+TGG | 0.262948 | 6.1:+51530201 | MS.gene86578:CDS |
| CTTGCAGGATGGAGCTATAT+TGG | 0.296931 | 6.1:+51529912 | MS.gene86578:intron |
| AGTGAATTGCCTACTTCTAA+TGG | 0.301502 | 6.1:+51527781 | MS.gene86578:CDS |
| GGAGCTAATAGACTTTATTC+TGG | 0.326721 | 6.1:+51530021 | MS.gene86578:CDS |
| TTTCTTACCTTAACAAAATT+GGG | 0.332855 | 6.1:-51529358 | None:intergenic |
| TTATTGGATGTGGCTGGTTC+AGG | 0.344569 | 6.1:-51531732 | None:intergenic |
| ATTGCAAGAGCATAGAAGTA+TGG | 0.349106 | 6.1:-51531008 | None:intergenic |
| TGTCTAATGAACAAGATATA+AGG | 0.355225 | 6.1:-51530232 | None:intergenic |
| CACTCTTGGAATGTTGGTGA+TGG | 0.368628 | 6.1:+51528039 | MS.gene86578:CDS |
| TCAGCATAAGCCCGTTTAGA+AGG | 0.378915 | 6.1:-51527814 | None:intergenic |
| GGTTCGGATAAGCTTTATAC+TGG | 0.382445 | 6.1:+51529050 | MS.gene86578:CDS |
| GGTGTAAGTTTCTTCACTCT+TGG | 0.386356 | 6.1:+51528025 | MS.gene86578:CDS |
| TAGACTTTATTCTGGTTCAA+TGG | 0.390656 | 6.1:+51530029 | MS.gene86578:CDS |
| ATGATGAGTCTGTAAGGGTT+TGG | 0.402529 | 6.1:+51529078 | MS.gene86578:CDS |
| AGGGTTTGGGACTGCCAGTC+TGG | 0.408736 | 6.1:+51529092 | MS.gene86578:CDS |
| TGCTACGGAAAGTGGAAATC+TGG | 0.412766 | 6.1:+51530349 | MS.gene86578:CDS |
| TGATGAGTCTGTAAGGGTTT+GGG | 0.413917 | 6.1:+51529079 | MS.gene86578:CDS |
| GTAAACACTGCAAGGTTTCA+AGG | 0.414343 | 6.1:-51530154 | None:intergenic |
| ATTAATGATATGCTCTTTGC+TGG | 0.418363 | 6.1:+51529579 | MS.gene86578:CDS |
| ATTCAAGGGAATTGTAGTTA+TGG | 0.419571 | 6.1:+51527997 | MS.gene86578:intron |
| GCCAAGTGAGAGTGTGGAAT+TGG | 0.422825 | 6.1:+51531706 | MS.gene86578:CDS |
| TCTTTGTTGACTCAGCTTGA+AGG | 0.427109 | 6.1:+51528066 | MS.gene86578:CDS |
| GGAATTGTAGTTATGGAGAT+AGG | 0.434741 | 6.1:+51528004 | MS.gene86578:CDS |
| GGTGATGTCTGTTCTTTGCT+GGG | 0.435801 | 6.1:+51530202 | MS.gene86578:CDS |
| GAAGTAATGATGAGTCTGTA+AGG | 0.439904 | 6.1:+51529072 | MS.gene86578:CDS |
| TTTCTTCACTCTTGGAATGT+TGG | 0.440764 | 6.1:+51528033 | MS.gene86578:CDS |
| TTGGGACTGCCAGTCTGGAC+AGG | 0.443226 | 6.1:+51529097 | MS.gene86578:CDS |
| GTGAATTGCCTACTTCTAAT+GGG | 0.444534 | 6.1:+51527782 | MS.gene86578:CDS |
| AGGTAAGATATTCAACAAAC+AGG | 0.445583 | 6.1:+51531626 | MS.gene86578:CDS |
| AATTGCTATGCCCTCTGGTT+CGG | 0.446239 | 6.1:+51529034 | MS.gene86578:CDS |
| TAGGGTATAATCACCCTTTG+TGG | 0.446419 | 6.1:+51530962 | MS.gene86578:intron |
| GGAATGGTGCTCCTTCTAAA+CGG | 0.446924 | 6.1:+51527803 | MS.gene86578:CDS |
| TTCTTCACTGGTGATGGAAC+TGG | 0.448650 | 6.1:+51531684 | MS.gene86578:CDS |
| GGCAATTCACTATGCAGAAA+AGG | 0.455554 | 6.1:-51527769 | None:intergenic |
| TTCATTAGACAAAACAGTAA+AGG | 0.464680 | 6.1:+51530244 | MS.gene86578:CDS |
| CGTGTTTACAATCGTCTTGG+TGG | 0.467498 | 6.1:+51527670 | MS.gene86578:CDS |
| TCAATGGAGATAAGTCTAGA+TGG | 0.468495 | 6.1:+51529525 | MS.gene86578:CDS |
| GAATGGTGCTCCTTCTAAAC+GGG | 0.477698 | 6.1:+51527804 | MS.gene86578:CDS |
| AGTGGAATTGCTATGCCCTC+TGG | 0.479861 | 6.1:+51529029 | MS.gene86578:CDS |
| ACTCTTGGAATGTTGGTGAT+GGG | 0.480654 | 6.1:+51528040 | MS.gene86578:CDS |
| AGCATATTCTTCACTGGTGA+TGG | 0.496351 | 6.1:+51531678 | MS.gene86578:CDS |
| GGTGTTGTTTCGTTAGTTGT+TGG | 0.496526 | 6.1:+51530000 | MS.gene86578:CDS |
| CGAGCAATTCAGACTGGTCC+TGG | 0.502735 | 6.1:+51531654 | MS.gene86578:CDS |
| TGTATAGCTGTGATCAATCT+TGG | 0.510474 | 6.1:+51529283 | MS.gene86578:CDS |
| CCTGGTAGCATATTCTTCAC+TGG | 0.512028 | 6.1:+51531672 | MS.gene86578:CDS |
| TTATTGCACGTTATTGGATG+TGG | 0.513129 | 6.1:-51531742 | None:intergenic |
| TGCACGTTATTGGATGTGGC+TGG | 0.513771 | 6.1:-51531738 | None:intergenic |
| GTGTGGTATGCTACGGAAAG+TGG | 0.514044 | 6.1:+51530341 | MS.gene86578:CDS |
| TGCATCATGCATCCCACAAA+GGG | 0.514045 | 6.1:-51530975 | None:intergenic |
| AGGGTATAATCACCCTTTGT+GGG | 0.517484 | 6.1:+51530963 | MS.gene86578:intron |
| TCCAATTCCACACTCTCACT+TGG | 0.520959 | 6.1:-51531707 | None:intergenic |
| GTATGATCAGTGAAGGTCCC+TGG | 0.528209 | 6.1:+51529320 | MS.gene86578:CDS |
| AAGCGTGTTTACAATCGTCT+TGG | 0.534374 | 6.1:+51527667 | MS.gene86578:CDS |
| TTTGTTTCTATGGATTTCGA+CGG | 0.545744 | 6.1:+51527637 | None:intergenic |
| ATTCTTTGAATCACCACCGT+TGG | 0.549048 | 6.1:-51527695 | None:intergenic |
| TCAGCTTGAAGGACATAAGA+AGG | 0.550026 | 6.1:+51528077 | MS.gene86578:CDS |
| TTGTAACAACCTGTCCAGAC+TGG | 0.550382 | 6.1:-51529106 | None:intergenic |
| TTGCAAGAGCATAGAAGTAT+GGG | 0.552250 | 6.1:-51531007 | None:intergenic |
| AATCGTCTTGGTGGGTCCAA+CGG | 0.554468 | 6.1:+51527679 | MS.gene86578:CDS |
| TTGGAACACACAAAATTCAA+TGG | 0.554692 | 6.1:+51529509 | MS.gene86578:CDS |
| TATGCTCTTTGCTGGTACGC+AGG | 0.562187 | 6.1:+51529587 | MS.gene86578:CDS |
| GCACCATTCCCATTAGAAGT+AGG | 0.568465 | 6.1:-51527790 | None:intergenic |
| GTGTTTACAATCGTCTTGGT+GGG | 0.570120 | 6.1:+51527671 | MS.gene86578:CDS |
| TTGTTCAGATTTGCAGAGAG+AGG | 0.570280 | 6.1:+51531606 | MS.gene86578:intron |
| GTTTCTATGGATTTCGACGG+TGG | 0.572025 | 6.1:+51527640 | None:intergenic |
| AACTAACGAAACAACACCAC+GGG | 0.575189 | 6.1:-51529995 | None:intergenic |
| ATCAATCTTGGTGGTGAAGT+AGG | 0.578906 | 6.1:+51529295 | MS.gene86578:CDS |
| AGTGCATAAACTTGTCCCAC+AGG | 0.580756 | 6.1:-51529549 | None:intergenic |
| TATGCAGGTGTGGTATGCTA+CGG | 0.582090 | 6.1:+51530334 | MS.gene86578:intron |
| ATAAAGCTTATCCGAACCAG+AGG | 0.585965 | 6.1:-51529045 | None:intergenic |
| TTGCCTACTTCTAATGGGAA+TGG | 0.590538 | 6.1:+51527787 | MS.gene86578:CDS |
| TTGAATGAACAGGTTGTGAG+TGG | 0.596326 | 6.1:+51529011 | MS.gene86578:intron |
| CAGTGTCTGTAAACACTGCA+AGG | 0.596655 | 6.1:-51530162 | None:intergenic |
| TGCAGCTGGCTCGAAACAGT+TGG | 0.597581 | 6.1:-51529956 | None:intergenic |
| TGACCTTTAAGTGATGCAGC+TGG | 0.606030 | 6.1:-51529970 | None:intergenic |
| ATAAGTCTAGATGGCCCTGT+GGG | 0.615106 | 6.1:+51529534 | MS.gene86578:CDS |
| CTTACGACGGCAGATCATAG+AGG | 0.618066 | 6.1:-51531045 | None:intergenic |
| CCAGTGAAGAATATGCTACC+AGG | 0.618179 | 6.1:-51531672 | None:intergenic |
| AGGATGGAGCTATATTGGTA+TGG | 0.618970 | 6.1:+51529917 | MS.gene86578:intron |
| TCACTATGCAGAAAAGGACA+TGG | 0.619738 | 6.1:-51527763 | None:intergenic |
| CGTCTTGGTGGGTCCAACGG+TGG | 0.620014 | 6.1:+51527682 | MS.gene86578:CDS |
| GTGCATCATGCATCCCACAA+AGG | 0.625754 | 6.1:-51530976 | None:intergenic |
| GTAGGTTGTATGATCAGTGA+AGG | 0.632803 | 6.1:+51529313 | MS.gene86578:CDS |
| ACTGACAGAGCACACGTCTG+TGG | 0.634364 | 6.1:+51530181 | MS.gene86578:CDS |
| GAGGTGCGAGCAATTCAGAC+TGG | 0.636091 | 6.1:+51531648 | MS.gene86578:CDS |
| AAGTAATGATGAGTCTGTAA+GGG | 0.639178 | 6.1:+51529073 | MS.gene86578:CDS |
| ATAGCTGTGATCAATCTTGG+TGG | 0.640866 | 6.1:+51529286 | MS.gene86578:CDS |
| GAACTGGCCAAGTGAGAGTG+TGG | 0.646364 | 6.1:+51531700 | MS.gene86578:CDS |
| GTGCATAAACTTGTCCCACA+GGG | 0.654394 | 6.1:-51529548 | None:intergenic |
| TAAGATATTCAACAAACAGG+AGG | 0.665359 | 6.1:+51531629 | MS.gene86578:CDS |
| TCACTTAAAGGTCATACCCG+TGG | 0.682929 | 6.1:+51529979 | MS.gene86578:CDS |
| TGTGGGATGCATGATGCACA+AGG | 0.684145 | 6.1:+51530980 | MS.gene86578:CDS |
| TAAAGCTTATCCGAACCAGA+GGG | 0.687572 | 6.1:-51529044 | None:intergenic |
| CAACTAACGAAACAACACCA+CGG | 0.703335 | 6.1:-51529996 | None:intergenic |
| GATAAGTCTAGATGGCCCTG+TGG | 0.703722 | 6.1:+51529533 | MS.gene86578:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAAGATTATTATTTTTAAAT+AGG | + | chr6.1:51530645-51530664 | MS.gene86578:intron | 10.0% |
| !!! | TTTAAGTTATTAATATACTA+TGG | + | chr6.1:51528585-51528604 | MS.gene86578:intron | 10.0% |
| !! | CATGTTTATAATTTGAATTA+TGG | + | chr6.1:51528231-51528250 | MS.gene86578:intron | 15.0% |
| !! | TAATAATTCTATAACATATC+TGG | - | chr6.1:51528274-51528293 | None:intergenic | 15.0% |
| !! | TATAAAAAAAACATGACTTT+AGG | - | chr6.1:51529636-51529655 | None:intergenic | 15.0% |
| !! | TGTAAAAATAAAAATCTTTC+TGG | - | chr6.1:51530825-51530844 | None:intergenic | 15.0% |
| !!! | TTTAATGGAAATTTTATATG+TGG | - | chr6.1:51530511-51530530 | None:intergenic | 15.0% |
| !! | AAATCATAACAATCAAAACA+AGG | - | chr6.1:51530315-51530334 | None:intergenic | 20.0% |
| !! | AATATTAAGCATAAGCATAT+AGG | - | chr6.1:51528880-51528899 | None:intergenic | 20.0% |
| !! | AATCATAACAATCAAAACAA+GGG | - | chr6.1:51530314-51530333 | None:intergenic | 20.0% |
| !! | ATATTAAGCATAAGCATATA+GGG | - | chr6.1:51528879-51528898 | None:intergenic | 20.0% |
| !! | TATCAAAAATGTTTACATAG+TGG | + | chr6.1:51529691-51529710 | MS.gene86578:intron | 20.0% |
| !! | TCCATAAATAAATTAGAGTT+AGG | - | chr6.1:51529418-51529437 | None:intergenic | 20.0% |
| !! | TTCATTCATTTGTATTTGTT+TGG | + | chr6.1:51531115-51531134 | MS.gene86578:intron | 20.0% |
| !! | TTGTTACAATTTCTTTCTAT+TGG | + | chr6.1:51529120-51529139 | MS.gene86578:intron | 20.0% |
| !! | TTTATATACCTATTTCAATG+CGG | + | chr6.1:51529650-51529669 | MS.gene86578:intron | 20.0% |
| !! | TTTCTTACCTTAACAAAATT+GGG | - | chr6.1:51529361-51529380 | None:intergenic | 20.0% |
| !!! | AAAAACTGAGTTGATAAAAT+AGG | - | chr6.1:51531504-51531523 | None:intergenic | 20.0% |
| !!! | AAATTTTCAAACATCTCATA+AGG | - | chr6.1:51530710-51530729 | None:intergenic | 20.0% |
| !!! | AATTTTCAAACATCTCATAA+GGG | - | chr6.1:51530709-51530728 | None:intergenic | 20.0% |
| !!! | AATTTTGGTTATGTTTTGAA+TGG | + | chr6.1:51528438-51528457 | MS.gene86578:intron | 20.0% |
| !!! | ATTTGAAATACAAAACAGAA+TGG | - | chr6.1:51529168-51529187 | None:intergenic | 20.0% |
| !!! | ATTTGAATTATGGTTTTGAA+TGG | + | chr6.1:51528241-51528260 | MS.gene86578:intron | 20.0% |
| !!! | ATTTTGGTTATGTTTTGAAT+GGG | + | chr6.1:51528439-51528458 | MS.gene86578:intron | 20.0% |
| !!! | GTATTGTCTTTTTTTTAATG+TGG | + | chr6.1:51530770-51530789 | MS.gene86578:intron | 20.0% |
| !!! | TGAACTTATTCTTAACTTTT+TGG | + | chr6.1:51531575-51531594 | MS.gene86578:intron | 20.0% |
| !!! | TTTATCTCTTTTTATATCTC+TGG | + | chr6.1:51531539-51531558 | MS.gene86578:intron | 20.0% |
| ! | AAAGTTATTCATGGCAAAAA+TGG | + | chr6.1:51531166-51531185 | MS.gene86578:intron | 25.0% |
| ! | AATAAGTTGTTTATCCAAAC+AGG | - | chr6.1:51528612-51528631 | None:intergenic | 25.0% |
| ! | AATATTTCCTAAGATCCTAA+AGG | - | chr6.1:51529807-51529826 | None:intergenic | 25.0% |
| ! | AATTATTTGAGCTTATCTAC+TGG | - | chr6.1:51528843-51528862 | None:intergenic | 25.0% |
| ! | AGGCAAATGTTAATAAGTAA+TGG | + | chr6.1:51528509-51528528 | MS.gene86578:intron | 25.0% |
| ! | ATAAGTTGTTTATCCAAACA+GGG | - | chr6.1:51528611-51528630 | None:intergenic | 25.0% |
| ! | ATCATAACAATCAAAACAAG+GGG | - | chr6.1:51530313-51530332 | None:intergenic | 25.0% |
| ! | ATGTTAATAAGTAATGGCAT+TGG | + | chr6.1:51528515-51528534 | MS.gene86578:intron | 25.0% |
| ! | CTTTCTTACCTTAACAAAAT+TGG | - | chr6.1:51529362-51529381 | None:intergenic | 25.0% |
| ! | GAAATACCAACATTTCTAAT+GGG | - | chr6.1:51530468-51530487 | None:intergenic | 25.0% |
| ! | GCCTAACTCTAATTTATTTA+TGG | + | chr6.1:51529414-51529433 | MS.gene86578:intron | 25.0% |
| ! | GTTCTTTAATAGAAGCAATA+GGG | + | chr6.1:51531364-51531383 | MS.gene86578:intron | 25.0% |
| ! | TATTAAGCATAAGCATATAG+GGG | - | chr6.1:51528878-51528897 | None:intergenic | 25.0% |
| ! | TATTATTTCCGCATTGAAAT+AGG | - | chr6.1:51529661-51529680 | None:intergenic | 25.0% |
| ! | TCATACACCTAATTAATTTC+CGG | - | chr6.1:51528947-51528966 | None:intergenic | 25.0% |
| ! | TGAAATACCAACATTTCTAA+TGG | - | chr6.1:51530469-51530488 | None:intergenic | 25.0% |
| ! | TGTCTAATGAACAAGATATA+AGG | - | chr6.1:51530235-51530254 | None:intergenic | 25.0% |
| ! | TGTTCTTTAATAGAAGCAAT+AGG | + | chr6.1:51531363-51531382 | MS.gene86578:intron | 25.0% |
| ! | TTACTGTACAAAGTTATTCA+TGG | + | chr6.1:51531157-51531176 | MS.gene86578:intron | 25.0% |
| ! | TTCATTAGACAAAACAGTAA+AGG | + | chr6.1:51530244-51530263 | MS.gene86578:CDS | 25.0% |
| ! | TTCTACACAAAATGTTGTAT+TGG | + | chr6.1:51530882-51530901 | MS.gene86578:intron | 25.0% |
| ! | TTGAAAGAGTTTGTACTTAT+TGG | + | chr6.1:51527974-51527993 | MS.gene86578:intron | 25.0% |
| ! | TTGATTGTTATGATTTATGC+AGG | + | chr6.1:51530319-51530338 | MS.gene86578:intron | 25.0% |
| ! | TTTGTACTTATTGGATTCAA+GGG | + | chr6.1:51527983-51528002 | MS.gene86578:intron | 25.0% |
| ! | TTTGTTAAGAAAGAGCAAAT+AGG | + | chr6.1:51529440-51529459 | MS.gene86578:intron | 25.0% |
| !! | AATTTATTTATGTTTTCCCC+TGG | + | chr6.1:51530410-51530429 | MS.gene86578:intron | 25.0% |
| !! | ATTTTCAAACATCTCATAAG+GGG | - | chr6.1:51530708-51530727 | None:intergenic | 25.0% |
| !! | GTTGGTATTTCATGATTTTA+GGG | + | chr6.1:51530477-51530496 | MS.gene86578:intron | 25.0% |
| !! | TGTTGGTATTTCATGATTTT+AGG | + | chr6.1:51530476-51530495 | MS.gene86578:intron | 25.0% |
| !! | TTGGTTCTTAGATCATTTAA+TGG | - | chr6.1:51530526-51530545 | None:intergenic | 25.0% |
| !!! | AACACAACAATTTAGTTCTT+TGG | - | chr6.1:51529247-51529266 | None:intergenic | 25.0% |
| !!! | AATCTTGATAATGAAACCTA+TGG | + | chr6.1:51528157-51528176 | MS.gene86578:intron | 25.0% |
| !!! | TGTATTGGTATTTGTTATAG+TGG | + | chr6.1:51530897-51530916 | MS.gene86578:intron | 25.0% |
| !!! | TTTTGGTTATGTTTTGAATG+GGG | + | chr6.1:51528440-51528459 | MS.gene86578:intron | 25.0% |
| AAACTATGGTTTATGCCTTT+AGG | + | chr6.1:51529789-51529808 | MS.gene86578:intron | 30.0% | |
| AAGTAATGATGAGTCTGTAA+GGG | + | chr6.1:51529073-51529092 | MS.gene86578:CDS | 30.0% | |
| AATGCCACATTATATTGTGA+AGG | - | chr6.1:51531480-51531499 | None:intergenic | 30.0% | |
| AGTTAAGAATAAGTTCACGA+TGG | - | chr6.1:51531572-51531591 | None:intergenic | 30.0% | |
| ATACTCGATGATAACAATGT+TGG | - | chr6.1:51528186-51528205 | None:intergenic | 30.0% | |
| ATATGTAACAAGAGCAAGAA+TGG | - | chr6.1:51531082-51531101 | None:intergenic | 30.0% | |
| ATTAATGATATGCTCTTTGC+TGG | + | chr6.1:51529579-51529598 | MS.gene86578:CDS | 30.0% | |
| ATTCAAGGGAATTGTAGTTA+TGG | + | chr6.1:51527997-51528016 | MS.gene86578:intron | 30.0% | |
| CACAATACACTATTAGTACA+AGG | + | chr6.1:51531340-51531359 | MS.gene86578:intron | 30.0% | |
| CATACACCTAATTAATTTCC+GGG | - | chr6.1:51528946-51528965 | None:intergenic | 30.0% | |
| CTTGCTCTTGTTACATATTA+TGG | + | chr6.1:51531084-51531103 | MS.gene86578:intron | 30.0% | |
| CTTGTACTAATAGTGTATTG+TGG | - | chr6.1:51531342-51531361 | None:intergenic | 30.0% | |
| GATAAACAAGTTGCATTCAT+CGG | - | chr6.1:51528336-51528355 | None:intergenic | 30.0% | |
| GTTTGTACTTATTGGATTCA+AGG | + | chr6.1:51527982-51528001 | MS.gene86578:intron | 30.0% | |
| TATGTAACAAGAGCAAGAAT+GGG | - | chr6.1:51531081-51531100 | None:intergenic | 30.0% | |
| TCATAACAATCAAAACAAGG+GGG | - | chr6.1:51530312-51530331 | None:intergenic | 30.0% | |
| TCATTGAAAATGATCATGCA+GGG | - | chr6.1:51530750-51530769 | None:intergenic | 30.0% | |
| TGAAGAACTGCAGATTAAAA+TGG | - | chr6.1:51531212-51531231 | None:intergenic | 30.0% | |
| TGAGAATAGCTTATGAACAA+TGG | + | chr6.1:51528770-51528789 | MS.gene86578:intron | 30.0% | |
| TGATATGAGTTCAGTTCATT+AGG | - | chr6.1:51530549-51530568 | None:intergenic | 30.0% | |
| TGATCCTTCACAATATAATG+TGG | + | chr6.1:51531473-51531492 | MS.gene86578:intron | 30.0% | |
| TTGGAACACACAAAATTCAA+TGG | + | chr6.1:51529509-51529528 | MS.gene86578:CDS | 30.0% | |
| TTTAATAGAAGCAATAGGGT+TGG | + | chr6.1:51531368-51531387 | MS.gene86578:intron | 30.0% | |
| TTTGGTATACAAAACAAGCT+TGG | + | chr6.1:51531133-51531152 | MS.gene86578:intron | 30.0% | |
| ! | GAATGTGTTGATCTTATGTA+TGG | + | chr6.1:51530432-51530451 | MS.gene86578:intron | 30.0% |
| ! | TTCTTTGGCTTAATCTCAAA+AGG | - | chr6.1:51529232-51529251 | None:intergenic | 30.0% |
| !! | AAACATGACTTTAGGATCTT+AGG | - | chr6.1:51529628-51529647 | None:intergenic | 30.0% |
| !! | ATCAGAAAGTGTGTTTTCAA+TGG | + | chr6.1:51527716-51527735 | MS.gene86578:CDS | 30.0% |
| !! | ATTCGAGTTTTTCTGGTAAT+CGG | + | chr6.1:51527839-51527858 | MS.gene86578:intron | 30.0% |
| !! | TAGACTTTATTCTGGTTCAA+TGG | + | chr6.1:51530029-51530048 | MS.gene86578:CDS | 30.0% |
| !! | TTTGGTTATGTTTTGAATGG+GGG | + | chr6.1:51528441-51528460 | MS.gene86578:intron | 30.0% |
| !!! | TGAATTATGGTTTTGAATGG+TGG | + | chr6.1:51528244-51528263 | MS.gene86578:intron | 30.0% |
| !!! | TTTTTGGGTAATGAGTTGAT+AGG | + | chr6.1:51528972-51528991 | MS.gene86578:intron | 30.0% |
| AAGAAAGAGCAAATAGGCAT+CGG | + | chr6.1:51529446-51529465 | MS.gene86578:intron | 35.0% | |
| ACATAAGATCAACACATTCC+AGG | - | chr6.1:51530431-51530450 | None:intergenic | 35.0% | |
| AGTGAATTGCCTACTTCTAA+TGG | + | chr6.1:51527781-51527800 | MS.gene86578:CDS | 35.0% | |
| ATAACAATGTTGGCATCCAT+AGG | - | chr6.1:51528176-51528195 | None:intergenic | 35.0% | |
| ATAAGATCAACACATTCCAG+GGG | - | chr6.1:51530429-51530448 | None:intergenic | 35.0% | |
| ATCGGTAATGATATCCTGTT+TGG | + | chr6.1:51529464-51529483 | MS.gene86578:intron | 35.0% | |
| ATGAGTTCAGTTCATTAGGT+TGG | - | chr6.1:51530545-51530564 | None:intergenic | 35.0% | |
| CATAAGATCAACACATTCCA+GGG | - | chr6.1:51530430-51530449 | None:intergenic | 35.0% | |
| CATCCAATAACGTGCAATAA+AGG | + | chr6.1:51531745-51531764 | MS.gene86578:CDS | 35.0% | |
| CTCATTGAAAATGATCATGC+AGG | - | chr6.1:51530751-51530770 | None:intergenic | 35.0% | |
| GAAGTAATGATGAGTCTGTA+AGG | + | chr6.1:51529072-51529091 | MS.gene86578:CDS | 35.0% | |
| GATGTTATGATCTGCTTGTA+GGG | + | chr6.1:51530944-51530963 | MS.gene86578:intron | 35.0% | |
| GCAATACCCGGAAATTAATT+AGG | + | chr6.1:51528937-51528956 | MS.gene86578:intron | 35.0% | |
| GGAATTGTAGTTATGGAGAT+AGG | + | chr6.1:51528004-51528023 | MS.gene86578:CDS | 35.0% | |
| GGAGCTAATAGACTTTATTC+TGG | + | chr6.1:51530021-51530040 | MS.gene86578:CDS | 35.0% | |
| GTGAATTGCCTACTTCTAAT+GGG | + | chr6.1:51527782-51527801 | MS.gene86578:CDS | 35.0% | |
| TAATATACTATGGCCCTGTT+TGG | + | chr6.1:51528595-51528614 | MS.gene86578:intron | 35.0% | |
| TATTTGACAACACTACATGG+AGG | - | chr6.1:51531267-51531286 | None:intergenic | 35.0% | |
| TCAATGGAGATAAGTCTAGA+TGG | + | chr6.1:51529525-51529544 | MS.gene86578:CDS | 35.0% | |
| TCAATTGTCAAGTGTTAGAG+AGG | + | chr6.1:51528489-51528508 | MS.gene86578:intron | 35.0% | |
| TCTTGTCCCATTAGAAATGT+TGG | + | chr6.1:51530459-51530478 | MS.gene86578:intron | 35.0% | |
| TGATGTTATGATCTGCTTGT+AGG | + | chr6.1:51530943-51530962 | MS.gene86578:intron | 35.0% | |
| TGTATAGCTGTGATCAATCT+TGG | + | chr6.1:51529283-51529302 | MS.gene86578:CDS | 35.0% | |
| TGTTATGATTTATGCAGGTG+TGG | + | chr6.1:51530324-51530343 | MS.gene86578:intron | 35.0% | |
| TTATTGCACGTTATTGGATG+TGG | - | chr6.1:51531745-51531764 | None:intergenic | 35.0% | |
| TTTATCAGTGTTGTCAATCG+AGG | - | chr6.1:51531442-51531461 | None:intergenic | 35.0% | |
| TTTCTTCACTCTTGGAATGT+TGG | + | chr6.1:51528033-51528052 | MS.gene86578:CDS | 35.0% | |
| ! | AGGTGTATGAGTGCATTTTT+GGG | + | chr6.1:51528957-51528976 | MS.gene86578:intron | 35.0% |
| ! | ATTGCAAGAGCATAGAAGTA+TGG | - | chr6.1:51531011-51531030 | None:intergenic | 35.0% |
| ! | CATGGACTATAGAAGTTTGT+TGG | - | chr6.1:51531417-51531436 | None:intergenic | 35.0% |
| ! | CTATCTGGGATTGAAAACTA+TGG | + | chr6.1:51529775-51529794 | MS.gene86578:intron | 35.0% |
| ! | TACACCTACAATTTTCTTGC+AGG | + | chr6.1:51529897-51529916 | MS.gene86578:intron | 35.0% |
| ! | TAGGTGTATGAGTGCATTTT+TGG | + | chr6.1:51528956-51528975 | MS.gene86578:intron | 35.0% |
| ! | TAGTTTTCAATCCCAGATAG+CGG | - | chr6.1:51529775-51529794 | None:intergenic | 35.0% |
| ! | TGCTATTTGACAACACTACA+TGG | - | chr6.1:51531270-51531289 | None:intergenic | 35.0% |
| ! | TGGCATACCCAATTTTGTTA+AGG | + | chr6.1:51529351-51529370 | MS.gene86578:CDS | 35.0% |
| ! | TTGCAAGAGCATAGAAGTAT+GGG | - | chr6.1:51531010-51531029 | None:intergenic | 35.0% |
| !! | GCTGATAATTCGAGTTTTTC+TGG | + | chr6.1:51527832-51527851 | MS.gene86578:CDS | 35.0% |
| !! | GTTTATGCCTTTAGGATCTT+AGG | + | chr6.1:51529797-51529816 | MS.gene86578:intron | 35.0% |
| !! | TATTTGTTATAGTGGTGACG+TGG | + | chr6.1:51530905-51530924 | MS.gene86578:intron | 35.0% |
| !! | TTATGTTTTGAATGGGGGTT+AGG | + | chr6.1:51528446-51528465 | MS.gene86578:intron | 35.0% |
| !! | TTCCATCTGTTGTTTCTTTC+AGG | + | chr6.1:51530124-51530143 | MS.gene86578:intron | 35.0% |
| !! | TTTGGCTTTGTTGAATGAAC+AGG | + | chr6.1:51529001-51529020 | MS.gene86578:intron | 35.0% |
| !!! | TGGATCGAGTTTTAATTCGT+GGG | + | chr6.1:51527867-51527886 | MS.gene86578:intron | 35.0% |
| AACTAACGAAACAACACCAC+GGG | - | chr6.1:51529998-51530017 | None:intergenic | 40.0% | |
| AAGCGTGTTTACAATCGTCT+TGG | + | chr6.1:51527667-51527686 | MS.gene86578:CDS | 40.0% | |
| ACGAATGAGAACAACCAAAC+AGG | - | chr6.1:51529481-51529500 | None:intergenic | 40.0% | |
| AGAATAAGTTCACGATGGTC+AGG | - | chr6.1:51531567-51531586 | None:intergenic | 40.0% | |
| AGCATATTCTTCACTGGTGA+TGG | + | chr6.1:51531678-51531697 | MS.gene86578:CDS | 40.0% | |
| AGGATGGAGCTATATTGGTA+TGG | + | chr6.1:51529917-51529936 | MS.gene86578:intron | 40.0% | |
| AGGGTATAATCACCCTTTGT+GGG | + | chr6.1:51530963-51530982 | MS.gene86578:intron | 40.0% | |
| ATAAAGCTTATCCGAACCAG+AGG | - | chr6.1:51529048-51529067 | None:intergenic | 40.0% | |
| ATAGCTGTGATCAATCTTGG+TGG | + | chr6.1:51529286-51529305 | MS.gene86578:CDS | 40.0% | |
| ATGATGAGTCTGTAAGGGTT+TGG | + | chr6.1:51529078-51529097 | MS.gene86578:CDS | 40.0% | |
| ATTCTTTGAATCACCACCGT+TGG | - | chr6.1:51527698-51527717 | None:intergenic | 40.0% | |
| CAACTAACGAAACAACACCA+CGG | - | chr6.1:51529999-51530018 | None:intergenic | 40.0% | |
| CACCTGAAAGAAACAACAGA+TGG | - | chr6.1:51530129-51530148 | None:intergenic | 40.0% | |
| CCATCCTGCAAGAAAATTGT+AGG | - | chr6.1:51529904-51529923 | None:intergenic | 40.0% | |
| CGGTTTCACATTATCTAGAC+AGG | - | chr6.1:51528316-51528335 | None:intergenic | 40.0% | |
| GAATAAGTTCACGATGGTCA+GGG | - | chr6.1:51531566-51531585 | None:intergenic | 40.0% | |
| GATTTATTCAGCGCGTCTAT+TGG | + | chr6.1:51528900-51528919 | MS.gene86578:intron | 40.0% | |
| GGCAATTCACTATGCAGAAA+AGG | - | chr6.1:51527772-51527791 | None:intergenic | 40.0% | |
| GGGAAATCAACTACTTACGA+CGG | - | chr6.1:51531061-51531080 | None:intergenic | 40.0% | |
| GGTGTAAGTTTCTTCACTCT+TGG | + | chr6.1:51528025-51528044 | MS.gene86578:CDS | 40.0% | |
| GTAAACACTGCAAGGTTTCA+AGG | - | chr6.1:51530157-51530176 | None:intergenic | 40.0% | |
| GTAGGTTGTATGATCAGTGA+AGG | + | chr6.1:51529313-51529332 | MS.gene86578:CDS | 40.0% | |
| GTGTTGTCAAATAGCAGCTA+TGG | + | chr6.1:51531274-51531293 | MS.gene86578:intron | 40.0% | |
| GTGTTTACAATCGTCTTGGT+GGG | + | chr6.1:51527671-51527690 | MS.gene86578:CDS | 40.0% | |
| TAAAGCTTATCCGAACCAGA+GGG | - | chr6.1:51529047-51529066 | None:intergenic | 40.0% | |
| TAGGGTATAATCACCCTTTG+TGG | + | chr6.1:51530962-51530981 | MS.gene86578:intron | 40.0% | |
| TCACTATGCAGAAAAGGACA+TGG | - | chr6.1:51527766-51527785 | None:intergenic | 40.0% | |
| TCAGCTTGAAGGACATAAGA+AGG | + | chr6.1:51528077-51528096 | MS.gene86578:CDS | 40.0% | |
| TGATGAGTCTGTAAGGGTTT+GGG | + | chr6.1:51529079-51529098 | MS.gene86578:CDS | 40.0% | |
| TTGAATGAACAGGTTGTGAG+TGG | + | chr6.1:51529011-51529030 | MS.gene86578:intron | 40.0% | |
| TTGCCTACTTCTAATGGGAA+TGG | + | chr6.1:51527787-51527806 | MS.gene86578:CDS | 40.0% | |
| TTGTTCAGATTTGCAGAGAG+AGG | + | chr6.1:51531606-51531625 | MS.gene86578:intron | 40.0% | |
| ! | CCTACAATTTTCTTGCAGGA+TGG | + | chr6.1:51529901-51529920 | MS.gene86578:intron | 40.0% |
| ! | GGTTCGGATAAGCTTTATAC+TGG | + | chr6.1:51529050-51529069 | MS.gene86578:CDS | 40.0% |
| ! | GGTTGTTCTCATTCGTTTTC+AGG | + | chr6.1:51529485-51529504 | MS.gene86578:intron | 40.0% |
| !! | ACTCTTGGAATGTTGGTGAT+GGG | + | chr6.1:51528040-51528059 | MS.gene86578:CDS | 40.0% |
| !! | ATCAATCTTGGTGGTGAAGT+AGG | + | chr6.1:51529295-51529314 | MS.gene86578:CDS | 40.0% |
| !! | GGTGTTGTTTCGTTAGTTGT+TGG | + | chr6.1:51530000-51530019 | MS.gene86578:CDS | 40.0% |
| !! | TCTGTTGTTTCTTTCAGGTG+TGG | + | chr6.1:51530129-51530148 | MS.gene86578:intron | 40.0% |
| !! | TCTTTGTTGACTCAGCTTGA+AGG | + | chr6.1:51528066-51528085 | MS.gene86578:CDS | 40.0% |
| !! | TTCTCATTCGTTTTCAGGCT+TGG | + | chr6.1:51529490-51529509 | MS.gene86578:intron | 40.0% |
| !! | TTGGGTAATGAGTTGATAGG+AGG | + | chr6.1:51528975-51528994 | MS.gene86578:intron | 40.0% |
| !!! | GATCGAGTTTTAATTCGTGG+GGG | + | chr6.1:51527869-51527888 | MS.gene86578:intron | 40.0% |
| !!! | GGATCGAGTTTTAATTCGTG+GGG | + | chr6.1:51527868-51527887 | MS.gene86578:intron | 40.0% |
| !!! | GTGGATCGAGTTTTAATTCG+TGG | + | chr6.1:51527866-51527885 | MS.gene86578:intron | 40.0% |
| !!! | TGAGTTGATAGGAGGAGTTT+TGG | + | chr6.1:51528983-51529002 | MS.gene86578:intron | 40.0% |
| AATTGCTATGCCCTCTGGTT+CGG | + | chr6.1:51529034-51529053 | MS.gene86578:CDS | 45.0% | |
| AGTGCATAAACTTGTCCCAC+AGG | - | chr6.1:51529552-51529571 | None:intergenic | 45.0% | |
| ATAAGTCTAGATGGCCCTGT+GGG | + | chr6.1:51529534-51529553 | MS.gene86578:CDS | 45.0% | |
| CAGTGTCTGTAAACACTGCA+AGG | - | chr6.1:51530165-51530184 | None:intergenic | 45.0% | |
| CCAGTGAAGAATATGCTACC+AGG | - | chr6.1:51531675-51531694 | None:intergenic | 45.0% | |
| CCTGGTAGCATATTCTTCAC+TGG | + | chr6.1:51531672-51531691 | MS.gene86578:CDS | 45.0% | |
| CGTGTTTACAATCGTCTTGG+TGG | + | chr6.1:51527670-51527689 | MS.gene86578:CDS | 45.0% | |
| CTTGCAGGATGGAGCTATAT+TGG | + | chr6.1:51529912-51529931 | MS.gene86578:intron | 45.0% | |
| GAATGGTGCTCCTTCTAAAC+GGG | + | chr6.1:51527804-51527823 | MS.gene86578:CDS | 45.0% | |
| GCACCATTCCCATTAGAAGT+AGG | - | chr6.1:51527793-51527812 | None:intergenic | 45.0% | |
| GGAATGGTGCTCCTTCTAAA+CGG | + | chr6.1:51527803-51527822 | MS.gene86578:CDS | 45.0% | |
| GGTAGCACATTAGCAATACC+CGG | + | chr6.1:51528925-51528944 | MS.gene86578:intron | 45.0% | |
| GGTATGCCAACAAAAAGCCA+GGG | - | chr6.1:51529340-51529359 | None:intergenic | 45.0% | |
| GGTGATGTCTGTTCTTTGCT+GGG | + | chr6.1:51530202-51530221 | MS.gene86578:CDS | 45.0% | |
| GTGCATAAACTTGTCCCACA+GGG | - | chr6.1:51529551-51529570 | None:intergenic | 45.0% | |
| GTGTTGTCAATCGAGGATCA+TGG | - | chr6.1:51531435-51531454 | None:intergenic | 45.0% | |
| TATGCAGGTGTGGTATGCTA+CGG | + | chr6.1:51530334-51530353 | MS.gene86578:intron | 45.0% | |
| TATTCAGCGCGTCTATTGGT+AGG | + | chr6.1:51528904-51528923 | MS.gene86578:intron | 45.0% | |
| TCACTTAAAGGTCATACCCG+TGG | + | chr6.1:51529979-51529998 | MS.gene86578:CDS | 45.0% | |
| TCAGCATAAGCCCGTTTAGA+AGG | - | chr6.1:51527817-51527836 | None:intergenic | 45.0% | |
| TCATAAGGGGCAAGCAGTAT+TGG | - | chr6.1:51530695-51530714 | None:intergenic | 45.0% | |
| TCCAATTCCACACTCTCACT+TGG | - | chr6.1:51531710-51531729 | None:intergenic | 45.0% | |
| TGACCTTTAAGTGATGCAGC+TGG | - | chr6.1:51529973-51529992 | None:intergenic | 45.0% | |
| TGCATCATGCATCCCACAAA+GGG | - | chr6.1:51530978-51530997 | None:intergenic | 45.0% | |
| TGCTACGGAAAGTGGAAATC+TGG | + | chr6.1:51530349-51530368 | MS.gene86578:CDS | 45.0% | |
| TTGTAACAACCTGTCCAGAC+TGG | - | chr6.1:51529109-51529128 | None:intergenic | 45.0% | |
| ! | CACTCTTGGAATGTTGGTGA+TGG | + | chr6.1:51528039-51528058 | MS.gene86578:CDS | 45.0% |
| ! | GTGTGTTTTCAATGGCAAGC+AGG | + | chr6.1:51527724-51527743 | MS.gene86578:CDS | 45.0% |
| ! | TGGTGATGTCTGTTCTTTGC+TGG | + | chr6.1:51530201-51530220 | MS.gene86578:CDS | 45.0% |
| ! | TTATTGGATGTGGCTGGTTC+AGG | - | chr6.1:51531735-51531754 | None:intergenic | 45.0% |
| !! | AGTTTTTCTGGTAATCGGCG+TGG | + | chr6.1:51527844-51527863 | MS.gene86578:intron | 45.0% |
| !! | TTCTTCACTGGTGATGGAAC+TGG | + | chr6.1:51531684-51531703 | MS.gene86578:CDS | 45.0% |
| !!! | ACATATTATAATTATAATTT+TGG | + | chr6.1:51528423-51528442 | MS.gene86578:intron | 5.0% |
| AGTGGAATTGCTATGCCCTC+TGG | + | chr6.1:51529029-51529048 | MS.gene86578:CDS | 50.0% | |
| CAGGATAGGATAGGGTGAGA+CGG | - | chr6.1:51529722-51529741 | None:intergenic | 50.0% | |
| CTATCCTGGCATCCCAGTTT+GGG | + | chr6.1:51529734-51529753 | MS.gene86578:intron | 50.0% | |
| CTTACGACGGCAGATCATAG+AGG | - | chr6.1:51531048-51531067 | None:intergenic | 50.0% | |
| GAGCCAGCTGCATCACTTAA+AGG | + | chr6.1:51529967-51529986 | MS.gene86578:CDS | 50.0% | |
| GATAAGTCTAGATGGCCCTG+TGG | + | chr6.1:51529533-51529552 | MS.gene86578:CDS | 50.0% | |
| GGGTATGCCAACAAAAAGCC+AGG | - | chr6.1:51529341-51529360 | None:intergenic | 50.0% | |
| GTATGATCAGTGAAGGTCCC+TGG | + | chr6.1:51529320-51529339 | MS.gene86578:CDS | 50.0% | |
| GTGCATCATGCATCCCACAA+AGG | - | chr6.1:51530979-51530998 | None:intergenic | 50.0% | |
| GTGTGGTATGCTACGGAAAG+TGG | + | chr6.1:51530341-51530360 | MS.gene86578:CDS | 50.0% | |
| TAGGATAGGGTGAGACGGAA+TGG | - | chr6.1:51529717-51529736 | None:intergenic | 50.0% | |
| TATCCTGGCATCCCAGTTTG+GGG | + | chr6.1:51529735-51529754 | MS.gene86578:intron | 50.0% | |
| TATGCTCTTTGCTGGTACGC+AGG | + | chr6.1:51529587-51529606 | MS.gene86578:CDS | 50.0% | |
| TGCACGTTATTGGATGTGGC+TGG | - | chr6.1:51531741-51531760 | None:intergenic | 50.0% | |
| TGGGATGCCAGGATAGGATA+GGG | - | chr6.1:51529730-51529749 | None:intergenic | 50.0% | |
| TGTGGGATGCATGATGCACA+AGG | + | chr6.1:51530980-51530999 | MS.gene86578:CDS | 50.0% | |
| ! | AATCGTCTTGGTGGGTCCAA+CGG | + | chr6.1:51527679-51527698 | MS.gene86578:CDS | 50.0% |
| ! | GCCAAGTGAGAGTGTGGAAT+TGG | + | chr6.1:51531706-51531725 | MS.gene86578:CDS | 50.0% |
| !! | GAAGGTCCCTGGCTTTTTGT+TGG | + | chr6.1:51529331-51529350 | MS.gene86578:CDS | 50.0% |
| !! | TTTTCTGGTAATCGGCGTGG+TGG | + | chr6.1:51527847-51527866 | MS.gene86578:intron | 50.0% |
| !!! | AGTTTTAATTCGTGGGGGCC+GGG | + | chr6.1:51527874-51527893 | MS.gene86578:intron | 50.0% |
| !!! | GAGTTTTAATTCGTGGGGGC+CGG | + | chr6.1:51527873-51527892 | MS.gene86578:intron | 50.0% |
| ACTGACAGAGCACACGTCTG+TGG | + | chr6.1:51530181-51530200 | MS.gene86578:CDS | 55.0% | |
| AGACCAGCTGACCCCAAACT+GGG | - | chr6.1:51529749-51529768 | None:intergenic | 55.0% | |
| CCAAACTGGGATGCCAGGAT+AGG | - | chr6.1:51529736-51529755 | None:intergenic | 55.0% | |
| CCTATCCTGGCATCCCAGTT+TGG | + | chr6.1:51529733-51529752 | MS.gene86578:intron | 55.0% | |
| CGTCTCACCCTATCCTATCC+TGG | + | chr6.1:51529720-51529739 | MS.gene86578:intron | 55.0% | |
| CTGGGATGCCAGGATAGGAT+AGG | - | chr6.1:51529731-51529750 | None:intergenic | 55.0% | |
| GAACTGGCCAAGTGAGAGTG+TGG | + | chr6.1:51531700-51531719 | MS.gene86578:CDS | 55.0% | |
| GAGGTGCGAGCAATTCAGAC+TGG | + | chr6.1:51531648-51531667 | MS.gene86578:CDS | 55.0% | |
| ! | CGAGCAATTCAGACTGGTCC+TGG | + | chr6.1:51531654-51531673 | MS.gene86578:CDS | 55.0% |
| !! | TGCAGCTGGCTCGAAACAGT+TGG | - | chr6.1:51529959-51529978 | None:intergenic | 55.0% |
| !!! | GTTTTAATTCGTGGGGGCCG+GGG | + | chr6.1:51527875-51527894 | MS.gene86578:intron | 55.0% |
| CAGACCAGCTGACCCCAAAC+TGG | - | chr6.1:51529750-51529769 | None:intergenic | 60.0% | |
| TGACCCCAAACTGGGATGCC+AGG | - | chr6.1:51529741-51529760 | None:intergenic | 60.0% | |
| TTGGGACTGCCAGTCTGGAC+AGG | + | chr6.1:51529097-51529116 | MS.gene86578:CDS | 60.0% | |
| ! | AGCTGGTCTGTGCCGCTATC+TGG | + | chr6.1:51529760-51529779 | MS.gene86578:intron | 60.0% |
| ! | AGGGTTTGGGACTGCCAGTC+TGG | + | chr6.1:51529092-51529111 | MS.gene86578:CDS | 60.0% |
| ! | CATCCCAGTTTGGGGTCAGC+TGG | + | chr6.1:51529743-51529762 | MS.gene86578:intron | 60.0% |
| ! | GCTGGTCTGTGCCGCTATCT+GGG | + | chr6.1:51529761-51529780 | MS.gene86578:intron | 60.0% |
| !! | GTAGGTGGTGGTGGTGGTAG+AGG | + | chr6.1:51527937-51527956 | MS.gene86578:intron | 60.0% |
| ! | CGTCTTGGTGGGTCCAACGG+TGG | + | chr6.1:51527682-51527701 | MS.gene86578:CDS | 65.0% |
| ! | TGGTGGACGTGGTCGTGGTG+GGG | + | chr6.1:51527903-51527922 | MS.gene86578:intron | 65.0% |
| !! | AGAGGTGGTGGACGTGGTCG+TGG | + | chr6.1:51527898-51527917 | MS.gene86578:intron | 65.0% |
| !! | GGTGGTGTAGGTGGTGGTGG+TGG | + | chr6.1:51527931-51527950 | MS.gene86578:intron | 65.0% |
| !! | GTGGTGGACGTGGTCGTGGT+GGG | + | chr6.1:51527902-51527921 | MS.gene86578:intron | 65.0% |
| AATTCGTGGGGGCCGGGGAG+AGG | + | chr6.1:51527880-51527899 | MS.gene86578:intron | 70.0% | |
| CCACGTCCACCACCTCTCCC+CGG | - | chr6.1:51527895-51527914 | None:intergenic | 70.0% | |
| GGACGGGGTGGTGTAGGTGG+TGG | + | chr6.1:51527925-51527944 | MS.gene86578:intron | 70.0% | |
| GGTGGACGTGGTCGTGGTGG+GGG | + | chr6.1:51527904-51527923 | MS.gene86578:intron | 70.0% | |
| ! | ACGTGGTCGTGGTGGGGGAC+GGG | + | chr6.1:51527909-51527928 | MS.gene86578:intron | 70.0% |
| ! | CGGGGTGGTGTAGGTGGTGG+TGG | + | chr6.1:51527928-51527947 | MS.gene86578:intron | 70.0% |
| ! | GACGTGGTCGTGGTGGGGGA+CGG | + | chr6.1:51527908-51527927 | MS.gene86578:intron | 70.0% |
| !! | GGTGGTGGACGTGGTCGTGG+TGG | + | chr6.1:51527901-51527920 | MS.gene86578:intron | 70.0% |
| GGGGGACGGGGTGGTGTAGG+TGG | + | chr6.1:51527922-51527941 | MS.gene86578:intron | 75.0% | |
| GGTGGGGGACGGGGTGGTGT+AGG | + | chr6.1:51527919-51527938 | MS.gene86578:intron | 75.0% | |
| ! | CGTGGTCGTGGTGGGGGACG+GGG | + | chr6.1:51527910-51527929 | MS.gene86578:intron | 75.0% |
| !! | CCGGGGAGAGGTGGTGGACG+TGG | + | chr6.1:51527892-51527911 | MS.gene86578:intron | 75.0% |
| ! | TCGTGGGGGCCGGGGAGAGG+TGG | + | chr6.1:51527883-51527902 | MS.gene86578:intron | 80.0% |
| ! | TGGGGGCCGGGGAGAGGTGG+TGG | + | chr6.1:51527886-51527905 | MS.gene86578:intron | 80.0% |
| !! | GGTCGTGGTGGGGGACGGGG+TGG | + | chr6.1:51527913-51527932 | MS.gene86578:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 51527646 | 51531764 | 51527646 | ID=MS.gene86578 |
| chr6.1 | mRNA | 51527646 | 51531764 | 51527646 | ID=MS.gene86578.t1;Parent=MS.gene86578 |
| chr6.1 | exon | 51527646 | 51527853 | 51527646 | ID=MS.gene86578.t1.exon1;Parent=MS.gene86578.t1 |
| chr6.1 | CDS | 51527646 | 51527853 | 51527646 | ID=cds.MS.gene86578.t1;Parent=MS.gene86578.t1 |
| chr6.1 | exon | 51528004 | 51528098 | 51528004 | ID=MS.gene86578.t1.exon2;Parent=MS.gene86578.t1 |
| chr6.1 | CDS | 51528004 | 51528098 | 51528004 | ID=cds.MS.gene86578.t1;Parent=MS.gene86578.t1 |
| chr6.1 | exon | 51529023 | 51529118 | 51529023 | ID=MS.gene86578.t1.exon3;Parent=MS.gene86578.t1 |
| chr6.1 | CDS | 51529023 | 51529118 | 51529023 | ID=cds.MS.gene86578.t1;Parent=MS.gene86578.t1 |
| chr6.1 | exon | 51529283 | 51529372 | 51529283 | ID=MS.gene86578.t1.exon4;Parent=MS.gene86578.t1 |
| chr6.1 | CDS | 51529283 | 51529372 | 51529283 | ID=cds.MS.gene86578.t1;Parent=MS.gene86578.t1 |
| chr6.1 | exon | 51529507 | 51529608 | 51529507 | ID=MS.gene86578.t1.exon5;Parent=MS.gene86578.t1 |
| chr6.1 | CDS | 51529507 | 51529608 | 51529507 | ID=cds.MS.gene86578.t1;Parent=MS.gene86578.t1 |
| chr6.1 | exon | 51529919 | 51530065 | 51529919 | ID=MS.gene86578.t1.exon6;Parent=MS.gene86578.t1 |
| chr6.1 | CDS | 51529919 | 51530065 | 51529919 | ID=cds.MS.gene86578.t1;Parent=MS.gene86578.t1 |
| chr6.1 | exon | 51530146 | 51530265 | 51530146 | ID=MS.gene86578.t1.exon7;Parent=MS.gene86578.t1 |
| chr6.1 | CDS | 51530146 | 51530265 | 51530146 | ID=cds.MS.gene86578.t1;Parent=MS.gene86578.t1 |
| chr6.1 | exon | 51530341 | 51530400 | 51530341 | ID=MS.gene86578.t1.exon8;Parent=MS.gene86578.t1 |
| chr6.1 | CDS | 51530341 | 51530400 | 51530341 | ID=cds.MS.gene86578.t1;Parent=MS.gene86578.t1 |
| chr6.1 | exon | 51530965 | 51531062 | 51530965 | ID=MS.gene86578.t1.exon9;Parent=MS.gene86578.t1 |
| chr6.1 | CDS | 51530965 | 51531062 | 51530965 | ID=cds.MS.gene86578.t1;Parent=MS.gene86578.t1 |
| chr6.1 | exon | 51531614 | 51531764 | 51531614 | ID=MS.gene86578.t1.exon10;Parent=MS.gene86578.t1 |
| chr6.1 | CDS | 51531614 | 51531764 | 51531614 | ID=cds.MS.gene86578.t1;Parent=MS.gene86578.t1 |
| Gene Sequence |
| Protein sequence |
