AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene24037

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene24037.t1 MTR_1g069105 100.000 446 0 0 1 446 1 446 0.0 899
MS.gene24037.t1 MTR_7g099640 96.644 447 12 2 1 446 1 445 0.0 862
MS.gene24037.t1 MTR_7g099640 96.437 421 12 2 1 420 1 419 0.0 809
MS.gene24037.t1 MTR_1g069105 99.465 374 2 0 1 374 1 374 0.0 751
MS.gene24037.t1 MTR_3g062510 50.970 361 173 2 68 427 41 398 3.56e-131 385
MS.gene24037.t1 MTR_4g094270 52.000 325 155 1 115 438 83 407 5.42e-114 341
MS.gene24037.t1 MTR_1g083330 44.670 394 186 3 65 437 34 416 4.72e-113 339
MS.gene24037.t1 MTR_4g033235 45.000 380 188 1 79 437 38 417 1.77e-112 337
MS.gene24037.t1 MTR_3g062510 52.769 307 140 3 68 372 40 343 2.36e-112 335
MS.gene24037.t1 MTR_3g117230 46.361 371 192 2 74 437 18 388 1.76e-107 324
MS.gene24037.t1 MTR_3g112260 45.251 358 196 0 80 437 28 385 7.33e-106 320
MS.gene24037.t1 MTR_1g095660 45.272 349 173 5 112 446 38 382 4.66e-101 307
MS.gene24037.t1 MTR_8g023550 43.109 341 171 4 112 446 85 408 9.58e-92 284
MS.gene24037.t1 MTR_7g101870 47.137 227 117 1 190 416 208 431 6.56e-61 212
MS.gene24037.t1 MTR_7g101870 41.026 234 138 0 182 415 473 706 1.68e-53 191
MS.gene24037.t1 MTR_1g063380 46.696 227 118 1 190 416 207 430 4.18e-60 210
MS.gene24037.t1 MTR_1g063380 41.453 234 137 0 182 415 472 705 2.31e-54 194
MS.gene24037.t1 MTR_7g010800 44.490 245 135 1 189 433 207 450 3.35e-59 205
MS.gene24037.t1 MTR_4g094662 40.816 245 144 1 189 433 230 473 1.41e-56 199
MS.gene24037.t1 MTR_2g438140 41.224 245 143 1 189 433 227 470 8.34e-56 196
MS.gene24037.t1 MTR_2g438140 41.224 245 143 1 189 433 287 530 1.61e-55 195
MS.gene24037.t1 MTR_7g078570 37.377 305 177 5 142 433 136 439 3.39e-55 194
MS.gene24037.t1 MTR_4g064350 43.320 247 136 3 190 433 322 567 7.13e-55 195
MS.gene24037.t1 MTR_7g088850 38.683 243 149 0 173 415 267 509 1.15e-54 191
MS.gene24037.t1 MTR_7g088850 26.446 242 164 4 211 440 36 275 4.87e-19 90.1
MS.gene24037.t1 MTR_2g095320 45.374 227 117 3 190 416 155 374 3.22e-54 192
MS.gene24037.t1 MTR_2g095320 38.261 230 129 2 186 415 419 635 2.24e-42 159
MS.gene24037.t1 MTR_2g095210 41.453 234 137 0 182 415 400 633 1.85e-53 191
MS.gene24037.t1 MTR_2g095210 51.899 79 38 0 190 268 209 287 6.41e-20 93.2
MS.gene24037.t1 MTR_7g096060 42.972 249 134 4 190 433 242 487 5.33e-53 189
MS.gene24037.t1 MTR_8g099605 39.442 251 143 2 190 432 165 414 6.88e-53 188
MS.gene24037.t1 MTR_6g059690 39.576 283 165 4 156 433 163 444 1.44e-52 187
MS.gene24037.t1 MTR_3g115110 40.000 245 146 1 189 433 250 493 2.50e-52 187
MS.gene24037.t1 MTR_8g099605 39.442 251 143 2 190 432 406 655 3.07e-52 189
MS.gene24037.t1 MTR_0376s0020 41.870 246 140 2 190 433 3 247 6.33e-52 183
MS.gene24037.t1 MTR_5g069780 42.126 254 139 4 183 431 308 558 3.23e-51 185
MS.gene24037.t1 MTR_7g088980 37.786 262 161 1 173 432 121 382 3.25e-50 176
MS.gene24037.t1 MTR_3g462930 41.667 252 143 3 183 431 299 549 4.08e-50 182
MS.gene24037.t1 MTR_7g088980 37.786 262 161 1 173 432 203 464 1.72e-49 176
MS.gene24037.t1 MTR_7g088980 29.452 146 97 3 267 408 28 171 8.74e-12 67.4
MS.gene24037.t1 MTR_7g088980 37.786 262 161 1 173 432 271 532 4.47e-49 176
MS.gene24037.t1 MTR_7g088980 29.545 220 149 3 193 408 22 239 2.69e-24 105
MS.gene24037.t1 MTR_7g088980 37.786 262 161 1 173 432 297 558 7.02e-49 176
MS.gene24037.t1 MTR_7g088980 29.442 197 133 3 216 408 71 265 1.62e-20 94.7
MS.gene24037.t1 MTR_2g101290 39.683 252 148 2 190 438 417 667 1.39e-48 177
MS.gene24037.t1 MTR_3g104470 37.943 282 164 3 153 434 196 466 1.54e-48 177
MS.gene24037.t1 MTR_2g101290 39.683 252 148 2 190 438 417 667 4.61e-48 177
MS.gene24037.t1 MTR_7g088830 40.161 249 146 2 186 432 656 903 2.82e-47 174
MS.gene24037.t1 MTR_7g088830 34.579 214 124 5 227 429 432 640 1.27e-28 119
MS.gene24037.t1 MTR_2g078630 38.298 235 134 4 187 414 65 295 4.59e-47 174
MS.gene24037.t1 MTR_2g078630 38.298 235 134 4 187 414 593 823 8.33e-47 174
MS.gene24037.t1 MTR_6g016600 40.486 247 141 3 190 434 319 561 4.56e-46 168
MS.gene24037.t1 MTR_7g089040 41.036 251 145 2 184 432 681 930 5.10e-46 171
MS.gene24037.t1 MTR_7g089040 32.636 239 152 4 187 421 385 618 2.37e-30 125
MS.gene24037.t1 MTR_4g067100 39.754 244 138 3 189 426 381 621 5.53e-46 171
MS.gene24037.t1 MTR_4g067100 39.754 244 138 3 189 426 381 621 5.58e-46 171
MS.gene24037.t1 MTR_1g028390 37.600 250 147 3 187 434 328 570 1.16e-45 169
MS.gene24037.t1 MTR_3g104480 36.140 285 171 3 150 434 191 464 5.79e-45 166
MS.gene24037.t1 MTR_5g075340 39.184 245 145 2 190 434 231 471 1.64e-43 163
MS.gene24037.t1 MTR_7g089290 39.062 256 143 8 178 424 629 880 1.84e-43 163
MS.gene24037.t1 MTR_7g089290 39.062 256 143 8 178 424 657 908 1.85e-43 163
MS.gene24037.t1 MTR_4g011810 36.538 260 151 5 182 432 236 490 3.44e-42 156
MS.gene24037.t1 MTR_2g007010 38.938 226 136 2 190 414 240 464 9.42e-42 158
MS.gene24037.t1 MTR_2g007010 38.627 233 138 3 186 416 526 755 4.74e-40 153
MS.gene24037.t1 MTR_1g088730 38.528 231 133 5 189 415 933 1158 1.09e-40 155
MS.gene24037.t1 MTR_1g101870 38.261 230 134 5 189 415 558 782 3.13e-40 154
MS.gene24037.t1 MTR_1g101870 38.261 230 134 5 189 415 506 730 3.76e-40 154
MS.gene24037.t1 MTR_7g075520 36.214 243 146 5 176 415 200 436 3.88e-40 150
MS.gene24037.t1 MTR_5g009840 36.522 230 138 4 189 415 517 741 8.78e-40 152
MS.gene24037.t1 MTR_1g099470 37.391 230 135 5 189 415 435 658 1.77e-39 151
MS.gene24037.t1 MTR_4g053350 35.055 271 146 10 182 446 121 367 2.22e-39 147
MS.gene24037.t1 MTR_8g099065 35.217 230 141 4 189 415 535 759 2.26e-39 151
MS.gene24037.t1 MTR_4g053350 35.055 271 146 10 182 446 121 367 2.32e-39 147
MS.gene24037.t1 MTR_3g096000 38.723 235 133 5 189 415 297 528 2.47e-39 151
MS.gene24037.t1 MTR_1g088750 37.229 231 136 5 189 415 890 1115 3.35e-39 151
MS.gene24037.t1 MTR_1g088750 37.229 231 136 5 189 415 939 1164 3.53e-39 151
MS.gene24037.t1 MTR_2g086160 33.955 268 153 9 182 446 126 372 7.83e-39 145
MS.gene24037.t1 MTR_2g086160 36.564 227 134 7 182 405 126 345 1.47e-38 143
MS.gene24037.t1 MTR_4g096870 36.596 235 142 5 182 414 113 342 2.25e-38 144
MS.gene24037.t1 MTR_3g089100 36.889 225 133 5 189 409 903 1122 4.41e-38 148
MS.gene24037.t1 MTR_3g089100 36.889 225 133 5 189 409 898 1117 4.57e-38 148
MS.gene24037.t1 MTR_3g089100 36.889 225 133 5 189 409 932 1151 4.71e-38 148
MS.gene24037.t1 MTR_1g099480 36.522 230 138 5 189 415 469 693 3.24e-37 145
MS.gene24037.t1 MTR_6g033740 36.522 230 137 5 189 415 501 724 3.39e-37 145
MS.gene24037.t1 MTR_3g023900 34.457 267 159 6 182 436 230 492 4.47e-37 144
MS.gene24037.t1 MTR_3g023900 33.969 262 152 3 173 416 516 774 3.27e-34 136
MS.gene24037.t1 MTR_3g092070 36.522 230 136 5 190 415 83 306 3.48e-36 137
MS.gene24037.t1 MTR_3g092070 36.522 230 136 5 190 415 83 306 4.55e-36 135
MS.gene24037.t1 MTR_6g023875 37.398 246 140 8 177 416 371 608 1.19e-35 140
MS.gene24037.t1 MTR_3g023890 38.306 248 126 5 190 415 387 629 1.71e-34 136
MS.gene24037.t1 MTR_3g023890 34.468 235 135 7 200 424 106 331 5.80e-29 120
MS.gene24037.t1 MTR_4g088885 33.922 283 158 7 178 433 213 493 2.66e-34 136
MS.gene24037.t1 MTR_5g075360 33.969 262 166 3 176 434 1 258 4.65e-34 133
MS.gene24037.t1 MTR_5g075360 33.700 273 172 4 167 434 166 434 6.84e-34 134
MS.gene24037.t1 MTR_3g092080 36.364 231 135 6 190 415 86 309 1.04e-33 130
MS.gene24037.t1 MTR_5g075360 34.979 243 154 2 191 433 69 307 1.71e-33 132
MS.gene24037.t1 MTR_3g092080 36.364 231 135 6 190 415 86 309 1.85e-33 130
MS.gene24037.t1 MTR_3g104490 35.772 246 128 4 190 433 209 426 2.27e-33 133
MS.gene24037.t1 MTR_1g044600 31.597 288 140 6 156 433 135 375 2.36e-33 132
MS.gene24037.t1 MTR_6g023855 37.131 237 138 8 184 415 242 472 4.62e-33 131
MS.gene24037.t1 MTR_5g075360 34.979 243 154 2 191 433 245 483 5.02e-33 132
MS.gene24037.t1 MTR_5g074850 35.317 252 145 6 191 431 501 745 4.59e-32 130
MS.gene24037.t1 MTR_8g056860 32.245 245 152 3 196 431 477 716 4.88e-32 130
MS.gene24037.t1 MTR_4g112600 71.795 78 21 1 192 268 4 81 1.93e-31 115
MS.gene24037.t1 MTR_2g024440 35.931 231 127 7 189 408 215 435 5.81e-31 124
MS.gene24037.t1 MTR_8g469460 34.553 246 123 4 190 433 209 418 1.24e-30 125
MS.gene24037.t1 MTR_2g024440 35.931 231 127 7 189 408 297 517 1.30e-30 124
MS.gene24037.t1 MTR_2g024440 35.931 231 127 7 189 408 298 518 1.40e-30 124
MS.gene24037.t1 MTR_7g088980 30.916 262 136 2 173 432 271 489 1.91e-30 123
MS.gene24037.t1 MTR_7g088980 29.545 220 149 3 193 408 22 239 1.60e-24 106
MS.gene24037.t1 MTR_7g088980 30.916 262 136 2 173 432 297 515 2.94e-30 123
MS.gene24037.t1 MTR_7g088980 29.442 197 133 3 216 408 71 265 1.19e-20 94.7
MS.gene24037.t1 MTR_1g099480 39.766 171 96 4 189 356 469 635 5.97e-29 120
MS.gene24037.t1 MTR_4g074920 33.043 230 127 6 190 415 671 877 1.61e-28 119
MS.gene24037.t1 MTR_8g099065 38.012 171 98 4 189 356 535 700 2.10e-28 118
MS.gene24037.t1 MTR_6g023865 32.319 263 142 8 177 415 147 397 6.36e-28 115
MS.gene24037.t1 MTR_1g080430 30.041 243 153 6 173 411 659 888 9.30e-23 102
MS.gene24037.t1 MTR_1g080430 31.527 203 134 3 173 371 659 860 1.13e-22 102
MS.gene24037.t1 MTR_6g023845 30.159 252 121 11 177 415 105 314 5.30e-16 79.7
MS.gene24037.t1 MTR_4g083460 28.689 244 115 6 190 415 839 1041 6.68e-16 80.9
MS.gene24037.t1 MTR_8g076920 34.682 173 99 6 192 358 225 389 6.90e-14 73.9
MS.gene24037.t1 MTR_5g020980 34.161 161 93 5 203 358 229 381 1.51e-13 72.8
MS.gene24037.t1 MTR_5g020530 34.965 143 79 5 224 362 387 519 2.07e-13 72.8
MS.gene24037.t1 MTR_2g076840 30.435 184 111 7 195 370 477 651 5.21e-12 68.6
MS.gene24037.t1 MTR_6g042290 33.333 156 84 6 215 358 236 383 1.62e-11 66.6
MS.gene24037.t1 MTR_6g009510 25.773 291 181 11 77 358 74 338 1.67e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene24037.t1 AT4G29040 94.843 446 20 1 1 446 1 443 0.0 853
MS.gene24037.t1 AT2G20140 94.395 446 22 1 1 446 1 443 0.0 847
MS.gene24037.t1 AT5G58290 51.934 362 170 2 67 427 33 391 1.58e-133 390
MS.gene24037.t1 AT5G20000 51.692 325 156 1 115 438 85 409 4.33e-112 336
MS.gene24037.t1 AT5G19990 51.385 325 157 1 115 438 27 351 6.01e-112 334
MS.gene24037.t1 AT5G19990 51.385 325 157 1 115 438 85 409 6.53e-112 336
MS.gene24037.t1 AT5G19990 51.385 325 157 1 115 438 85 409 6.53e-112 336
MS.gene24037.t1 AT1G09100 45.789 380 185 2 79 437 37 416 2.31e-111 335
MS.gene24037.t1 AT3G05530 46.281 363 174 1 96 437 55 417 2.52e-111 335
MS.gene24037.t1 AT1G45000 46.631 371 191 3 74 437 15 385 2.83e-106 321
MS.gene24037.t1 AT5G43010 48.256 344 174 2 98 437 42 385 1.82e-105 318
MS.gene24037.t1 AT1G53750 46.334 341 175 3 112 446 85 423 3.14e-104 317
MS.gene24037.t1 AT1G53780 46.199 342 174 4 112 446 257 595 4.26e-98 306
MS.gene24037.t1 AT1G53780 46.199 342 174 4 112 446 257 595 4.26e-98 306
MS.gene24037.t1 AT1G53780 46.199 342 174 4 112 446 256 594 4.93e-98 306
MS.gene24037.t1 AT1G53780 46.199 342 174 4 112 446 278 616 7.72e-98 306
MS.gene24037.t1 AT1G45000 45.247 263 137 3 74 329 15 277 1.78e-67 219
MS.gene24037.t1 AT3G53230 47.137 227 117 1 190 416 207 430 1.69e-60 211
MS.gene24037.t1 AT3G53230 40.323 248 148 0 182 429 472 719 1.68e-54 194
MS.gene24037.t1 AT3G09840 47.137 227 117 2 190 416 206 429 9.49e-60 209
MS.gene24037.t1 AT3G09840 41.702 235 136 1 182 415 471 705 1.54e-51 186
MS.gene24037.t1 AT5G03340 47.137 227 117 2 190 416 206 429 9.88e-60 209
MS.gene24037.t1 AT5G03340 41.453 234 137 0 182 415 471 704 2.82e-53 191
MS.gene24037.t1 AT2G30950 41.633 245 142 1 189 433 229 472 2.39e-57 201
MS.gene24037.t1 AT2G30950 41.633 245 142 1 189 433 225 468 2.75e-57 201
MS.gene24037.t1 AT2G30950 41.633 245 142 1 189 433 225 468 2.75e-57 201
MS.gene24037.t1 AT2G30950 41.633 245 142 1 189 433 225 468 2.75e-57 201
MS.gene24037.t1 AT5G15250 43.673 245 137 1 189 433 222 465 1.60e-55 196
MS.gene24037.t1 AT1G06430 40.408 245 145 1 189 433 218 461 1.75e-55 196
MS.gene24037.t1 AT1G06430 40.408 245 145 1 189 433 218 461 1.75e-55 196
MS.gene24037.t1 AT1G06430 40.408 245 145 1 189 433 218 461 1.75e-55 196
MS.gene24037.t1 AT1G07510 43.725 247 135 3 190 433 326 571 3.66e-55 196
MS.gene24037.t1 AT3G47060 43.952 248 131 4 189 431 323 567 7.52e-54 192
MS.gene24037.t1 AT5G58870 43.952 248 131 4 189 431 327 571 9.48e-54 192
MS.gene24037.t1 AT1G50250 40.000 245 146 1 189 433 260 503 1.35e-52 188
MS.gene24037.t1 AT5G15250 39.925 268 137 2 189 433 222 488 3.97e-52 183
MS.gene24037.t1 AT2G29080 43.496 246 136 2 190 433 321 565 9.41e-52 187
MS.gene24037.t1 AT4G23940 39.044 251 144 2 190 432 429 678 7.05e-51 185
MS.gene24037.t1 AT5G42270 38.776 245 149 1 189 433 248 491 1.03e-50 182
MS.gene24037.t1 AT3G15120 39.485 233 132 3 187 413 725 954 4.79e-49 180
MS.gene24037.t1 AT3G15120 39.485 233 132 3 187 413 715 944 5.11e-49 180
MS.gene24037.t1 AT2G03670 38.400 250 151 2 186 432 281 530 1.58e-48 175
MS.gene24037.t1 AT2G03670 32.661 248 160 3 191 432 22 268 1.30e-35 139
MS.gene24037.t1 AT1G05910 40.323 248 139 3 189 430 379 623 1.85e-48 178
MS.gene24037.t1 AT2G26140 40.408 245 142 2 190 434 226 466 6.29e-48 175
MS.gene24037.t1 AT3G56690 40.000 230 137 1 186 415 719 947 2.47e-47 175
MS.gene24037.t1 AT3G56690 42.347 196 109 2 220 414 413 605 1.10e-42 161
MS.gene24037.t1 AT3G16290 39.749 239 143 1 190 428 409 646 4.47e-47 174
MS.gene24037.t1 AT5G53170 37.200 250 148 3 187 434 358 600 1.45e-45 169
MS.gene24037.t1 AT3G02450 39.850 266 152 4 183 444 326 587 1.55e-44 164
MS.gene24037.t1 AT2G45500 35.341 249 150 6 171 415 63 304 1.78e-43 156
MS.gene24037.t1 AT2G45500 35.341 249 150 6 171 415 63 304 1.78e-43 156
MS.gene24037.t1 AT2G45500 34.783 253 154 6 167 415 192 437 2.48e-42 156
MS.gene24037.t1 AT2G45500 35.341 249 150 6 171 415 200 441 2.84e-42 156
MS.gene24037.t1 AT1G03000 37.743 257 153 6 178 430 645 898 3.47e-42 160
MS.gene24037.t1 AT2G45500 34.783 253 154 6 167 415 202 447 4.41e-42 155
MS.gene24037.t1 AT1G80350 35.769 260 153 5 182 432 230 484 1.98e-41 154
MS.gene24037.t1 AT1G02890 38.095 231 134 5 189 415 942 1167 4.61e-41 157
MS.gene24037.t1 AT4G02480 38.095 231 134 5 189 415 961 1186 6.94e-41 156
MS.gene24037.t1 AT4G28000 37.826 230 134 6 189 415 518 741 1.47e-40 155
MS.gene24037.t1 AT4G28000 37.826 230 134 6 189 415 518 741 1.59e-40 155
MS.gene24037.t1 AT4G28000 37.826 230 134 6 189 415 516 739 1.65e-40 154
MS.gene24037.t1 AT5G53540 37.826 230 133 5 190 415 86 309 2.93e-40 149
MS.gene24037.t1 AT5G08470 36.726 226 140 1 190 415 843 1065 8.97e-40 153
MS.gene24037.t1 AT5G08470 36.726 226 140 1 190 415 834 1056 9.54e-40 153
MS.gene24037.t1 AT2G34560 36.283 226 140 3 190 414 102 324 4.75e-39 145
MS.gene24037.t1 AT2G34560 36.283 226 140 3 190 414 111 333 5.44e-39 145
MS.gene24037.t1 AT1G64110 35.652 230 140 5 189 415 517 741 1.38e-38 149
MS.gene24037.t1 AT1G64110 35.652 230 140 5 189 415 517 741 1.38e-38 149
MS.gene24037.t1 AT1G64110 35.652 230 140 5 189 415 519 743 1.46e-38 149
MS.gene24037.t1 AT1G64110 35.652 230 140 5 189 415 519 743 1.46e-38 149
MS.gene24037.t1 AT1G64110 35.652 230 140 5 189 415 514 738 1.73e-38 149
MS.gene24037.t1 AT5G52882 36.957 230 136 6 189 415 515 738 3.16e-38 148
MS.gene24037.t1 AT5G64580 37.447 235 136 6 189 415 314 545 6.51e-38 147
MS.gene24037.t1 AT3G01610 34.959 246 145 3 180 414 222 463 8.35e-38 147
MS.gene24037.t1 AT3G01610 36.123 227 140 3 190 415 527 749 1.75e-33 134
MS.gene24037.t1 AT3G01610 34.959 246 145 3 180 414 222 463 8.35e-38 147
MS.gene24037.t1 AT3G01610 36.123 227 140 3 190 415 527 749 1.71e-33 134
MS.gene24037.t1 AT4G27680 37.229 231 133 6 190 415 83 306 1.09e-37 142
MS.gene24037.t1 AT1G50140 37.500 232 132 6 190 415 713 937 1.59e-37 146
MS.gene24037.t1 AT1G50140 37.500 232 132 6 190 415 713 937 1.59e-37 146
MS.gene24037.t1 AT1G50140 37.500 232 132 6 190 415 713 937 1.59e-37 146
MS.gene24037.t1 AT1G50140 37.500 232 132 6 190 415 691 915 1.62e-37 146
MS.gene24037.t1 AT1G50140 37.500 232 132 6 190 415 691 915 1.62e-37 146
MS.gene24037.t1 AT2G03670 32.661 248 160 3 191 432 22 268 1.05e-36 140
MS.gene24037.t1 AT2G03670 38.028 142 87 1 186 326 281 422 3.48e-22 99.0
MS.gene24037.t1 AT2G27600 34.686 271 147 11 182 446 123 369 1.14e-36 140
MS.gene24037.t1 AT3G19740 36.087 230 138 5 190 415 703 927 6.45e-36 141
MS.gene24037.t1 AT4G24860 35.065 231 141 5 189 415 791 1016 8.48e-36 141
MS.gene24037.t1 AT4G24860 35.065 231 141 5 189 415 818 1043 8.74e-36 141
MS.gene24037.t1 AT4G24860 35.065 231 141 5 189 415 816 1041 8.90e-36 141
MS.gene24037.t1 AT4G24860 35.065 231 141 5 189 415 814 1039 1.16e-35 140
MS.gene24037.t1 AT3G27120 36.327 245 142 8 177 415 389 625 2.41e-35 139
MS.gene24037.t1 AT1G79560 32.653 245 151 3 196 431 497 736 2.39e-32 130
MS.gene24037.t1 AT1G79560 32.653 245 151 3 196 431 497 736 2.51e-32 130
MS.gene24037.t1 AT1G79560 32.653 245 151 3 196 431 497 736 2.80e-32 130
MS.gene24037.t1 AT4G04910 33.453 278 156 8 178 428 203 478 5.45e-32 129
MS.gene24037.t1 AT4G04180 35.808 229 130 6 189 408 317 537 8.85e-32 128
MS.gene24037.t1 AT4G04180 35.808 229 130 6 189 408 312 532 9.27e-32 128
MS.gene24037.t1 AT1G62130 32.143 224 133 6 189 409 744 951 5.64e-28 117
MS.gene24037.t1 AT1G62130 32.143 224 133 6 189 409 751 958 5.87e-28 117
MS.gene24037.t1 AT1G02890 33.766 231 116 6 189 415 942 1139 2.59e-26 112
MS.gene24037.t1 AT3G04340 33.511 188 120 3 186 372 782 965 4.96e-23 103
MS.gene24037.t1 AT5G08470 35.135 148 93 1 190 337 843 987 6.42e-20 93.2
MS.gene24037.t1 AT2G18193 34.568 162 93 6 201 357 219 372 1.07e-12 70.1
MS.gene24037.t1 AT2G18330 31.844 179 104 7 186 362 354 516 9.50e-12 67.4
MS.gene24037.t1 AT4G36580 30.481 187 100 7 184 362 349 513 1.05e-11 67.4

Find 122 sgRNAs with CRISPR-Local

Find 315 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCGCTGCCGTCTTGTTTC+CGG 0.187678 1.3:-48370910 None:intergenic
AGCAAGGTCTTTCCTGTTCC+AGG 0.251915 1.3:-48372905 None:intergenic
AAAAGTTCCCTCACAAGTTT+TGG 0.253191 1.3:-48373650 None:intergenic
TGGTTTAGATGCGCAGATTC+AGG 0.304376 1.3:+48372787 MS.gene24037:CDS
GGTGAAGGATTATTTGTTGA+TGG 0.316417 1.3:+48371078 MS.gene24037:CDS
AGGAGATGTAAAAGTGATTC+TGG 0.336312 1.3:+48373959 MS.gene24037:CDS
AAGCTGGCTTACTTGCTCTA+AGG 0.338560 1.3:+48374316 MS.gene24037:CDS
GCCGATGAGTGTTGGGAATC+TGG 0.341792 1.3:+48371192 MS.gene24037:CDS
GCCGTCTTGTTTCCGGTCAC+CGG 0.353994 1.3:-48370903 None:intergenic
CTTCACATATATAGTCCTTC+TGG 0.358495 1.3:-48375311 None:intergenic
CCTGAACTATATGAAGATAT+TGG 0.363458 1.3:+48372845 MS.gene24037:CDS
GAAAGTCGAGAAGGCTCCTT+TGG 0.379073 1.3:+48372745 MS.gene24037:CDS
TTGAATCAAAACCATCTAAC+TGG 0.394542 1.3:-48373935 None:intergenic
ATTCTCTGGAGCTGATATAA+AGG 0.399716 1.3:+48374281 MS.gene24037:CDS
TCCTTTGCCTTCTTAAAGTC+GGG 0.401797 1.3:-48375257 None:intergenic
CCAATATCTTCATATAGTTC+AGG 0.405223 1.3:-48372845 None:intergenic
TCATGCTATTGTTTCGAGTT+CGG 0.405752 1.3:+48371234 MS.gene24037:CDS
GGCGGAGGAAGATAGATCTA+AGG 0.407560 1.3:+48371150 MS.gene24037:CDS
TATCAGGTTCTATCGGTTGT+TGG 0.410524 1.3:+48372683 MS.gene24037:intron
CATATAGTTCAGGATGTGTA+AGG 0.423583 1.3:-48372835 None:intergenic
GGTCACCGGGATGGCCTTGT+CGG 0.424135 1.3:-48370889 None:intergenic
GCTATTGTTTCGAGTTCGGT+TGG 0.424882 1.3:+48371238 MS.gene24037:CDS
GCCTTGTCGGTTCATGCCGC+CGG 0.428871 1.3:-48370876 None:intergenic
TGTTTCGAGTTCGGTTGGGC+CGG 0.432915 1.3:+48371243 MS.gene24037:CDS
ATCCTTTGCCTTCTTAAAGT+CGG 0.438674 1.3:-48375258 None:intergenic
CTCAGCTTGCACTTCGATAC+CGG 0.441459 1.3:-48371037 None:intergenic
GCTACATTCTTGCGTGTAGT+AGG 0.441990 1.3:+48373593 MS.gene24037:CDS
TCGTAAACAACGCAAACAAA+AGG 0.444206 1.3:+48370979 MS.gene24037:CDS
GTGGCTCGCCGATGAGTGTT+GGG 0.452232 1.3:+48371185 MS.gene24037:CDS
ACACGCGCCGGTGGTGCTGC+TGG 0.453673 1.3:-48370953 None:intergenic
CCGTCTTGTTTCCGGTCACC+GGG 0.455694 1.3:-48370902 None:intergenic
GTTGGGCCGGAGTATTATGT+TGG 0.456605 1.3:+48371256 MS.gene24037:CDS
GAGTTGCTGAACCAGTTAGA+TGG 0.457903 1.3:+48373924 MS.gene24037:CDS
CGACCAGGTCGTAGCAAAGC+TGG 0.459189 1.3:-48374008 None:intergenic
TCAAGAGAGGTTGAAGCCTC+AGG 0.464256 1.3:+48371120 MS.gene24037:CDS
ATGACGAAGGATGAATTCTC+TGG 0.469733 1.3:+48374267 MS.gene24037:CDS
GTGATGTTTAAGAAGAAAGA+AGG 0.471189 1.3:+48375284 MS.gene24037:CDS
CTATTGTTTCGAGTTCGGTT+GGG 0.476955 1.3:+48371239 MS.gene24037:CDS
CGTGGCTCGCCGATGAGTGT+TGG 0.479586 1.3:+48371184 MS.gene24037:CDS
AGTTCAAACCTTTGCAAGCA+AGG 0.479869 1.3:-48372921 None:intergenic
TTGGGCCGGAGTATTATGTT+GGG 0.486241 1.3:+48371257 MS.gene24037:CDS
ATCAAGACTTTCAATTCTGT+TGG 0.488586 1.3:-48373985 None:intergenic
TACGACCTGGTCGTATTGAT+AGG 0.488820 1.3:+48374018 MS.gene24037:CDS
TTATATGGAGAACCTGGAAC+AGG 0.489995 1.3:+48372893 MS.gene24037:CDS
TGAATTGATACAAAAGTACT+TGG 0.490609 1.3:+48373619 MS.gene24037:CDS
GGTAACCGTGAAGCGGCATC+CGG 0.494841 1.3:-48371004 None:intergenic
GACAAGGCCATCCCGGTGAC+CGG 0.499250 1.3:+48370891 MS.gene24037:CDS
GAATCTTATGCTGACATTGG+TGG 0.503180 1.3:+48372767 MS.gene24037:CDS
GTTGAAGCCTCAGGAGGAGA+AGG 0.505715 1.3:+48371129 MS.gene24037:CDS
CCTTGTCGGTTCATGCCGCC+GGG 0.509201 1.3:-48370875 None:intergenic
AAATTAAGATACACACATCA+AGG 0.509917 1.3:+48374205 MS.gene24037:intron
AAGGCAATATGTACTGAAGC+TGG 0.512575 1.3:+48374300 MS.gene24037:CDS
ACTTTCATGACTGAGACCAT+TGG 0.513179 1.3:-48372728 None:intergenic
ATTCGAACCAGCAGCACCAC+CGG 0.515131 1.3:+48370946 MS.gene24037:CDS
TTGGAATCTTATGCTGACAT+TGG 0.515821 1.3:+48372764 MS.gene24037:CDS
TATTGGCATCAAGCCACCTA+AGG 0.517311 1.3:+48372862 MS.gene24037:CDS
AATCGATCGACGATGGGTCA+AGG 0.531008 1.3:+48370848 None:intergenic
CTTGTTTCCGGTCACCGGGA+TGG 0.534444 1.3:-48370898 None:intergenic
TCATCAATGAAAACAATAGC+AGG 0.540016 1.3:-48373695 None:intergenic
GAAGGATTATTTGTTGATGG+AGG 0.541197 1.3:+48371081 MS.gene24037:CDS
CGTAAACAACGCAAACAAAA+GGG 0.541325 1.3:+48370980 MS.gene24037:CDS
TCTAAGGGAACGCCGAATGA+AGG 0.547948 1.3:+48374332 MS.gene24037:CDS
GATCAACTTCGTCTTGCAGA+AGG 0.548110 1.3:-48372706 None:intergenic
ATGAACCGACAAGGCCATCC+CGG 0.552573 1.3:+48370884 MS.gene24037:CDS
AGGAAAGACCTTGCTTGCAA+AGG 0.553721 1.3:+48372913 MS.gene24037:CDS
GACTCATCCCGACTTTAAGA+AGG 0.557748 1.3:+48375250 MS.gene24037:CDS
ACAACGCAAACAAAAGGGTC+CGG 0.558245 1.3:+48370985 MS.gene24037:CDS
GCCTCAGGAGGAGAAGGCGG+AGG 0.564123 1.3:+48371135 MS.gene24037:CDS
AGGGTCCGGATGCCGCTTCA+CGG 0.566054 1.3:+48370999 MS.gene24037:CDS
TGAGGCTGTTAAAGCTTGAG+AGG 0.566340 1.3:+48371056 MS.gene24037:CDS
GTCATATTATATGGAGAACC+TGG 0.570307 1.3:+48372887 MS.gene24037:CDS
TCCAGATTCCCAACACTCAT+CGG 0.570778 1.3:-48371193 None:intergenic
GATCCAGCTTTGCTACGACC+TGG 0.573418 1.3:+48374005 MS.gene24037:CDS
GCAAGACGAAGTTGATCCAA+TGG 0.579653 1.3:+48372712 MS.gene24037:CDS
ACTAGCTGATGATGTCAACT+TGG 0.580062 1.3:+48374233 MS.gene24037:CDS
TACAGGTATGATGCTCACTC+AGG 0.582791 1.3:+48373870 MS.gene24037:intron
GGAAGAATTTGTTATGACGA+AGG 0.583336 1.3:+48374254 MS.gene24037:CDS
TCCTCCGCCTTCTCCTCCTG+AGG 0.587094 1.3:-48371136 None:intergenic
GTGGAGAACGTGAAATTCAA+AGG 0.587888 1.3:+48373892 MS.gene24037:CDS
GATAAGGATCAATTGGAGCC+TGG 0.591343 1.3:+48371295 MS.gene24037:CDS
ACGGTTACCGACGGTGACTC+CGG 0.591399 1.3:+48371018 MS.gene24037:CDS
AGCTGGCTTACTTGCTCTAA+GGG 0.591923 1.3:+48374317 MS.gene24037:CDS
ATATAGTTCAGGATGTGTAA+GGG 0.593502 1.3:-48372834 None:intergenic
ATACAAAAGTACTTGGGAGA+TGG 0.593824 1.3:+48373626 MS.gene24037:CDS
TCCCGACTTTAAGAAGGCAA+AGG 0.594284 1.3:+48375256 MS.gene24037:CDS
ATTGGCATCAAGCCACCTAA+GGG 0.598240 1.3:+48372863 MS.gene24037:CDS
AGGTATGATGCTCACTCAGG+TGG 0.601443 1.3:+48373873 MS.gene24037:intron
AAAATCCCAACATAATACTC+CGG 0.602001 1.3:-48371262 None:intergenic
TGCCGCTTCACGGTTACCGA+CGG 0.603500 1.3:+48371009 MS.gene24037:CDS
ATTGATGAAATTGATGCGGT+CGG 0.608145 1.3:+48373710 MS.gene24037:CDS
AAGAAAGAAGGAGTGCCAGA+AGG 0.608420 1.3:+48375296 MS.gene24037:CDS
GCAGATTCAGGAAATTAAAG+AGG 0.609731 1.3:+48372799 MS.gene24037:CDS
GTTAAAGCTTGAGAGGGTGA+AGG 0.609846 1.3:+48371063 MS.gene24037:CDS
AGATGGTCCAAAACTTGTGA+GGG 0.610145 1.3:+48373643 MS.gene24037:CDS
CACCGTCGGTAACCGTGAAG+CGG 0.611205 1.3:-48371011 None:intergenic
TATAGTTCAGGATGTGTAAG+GGG 0.615490 1.3:-48372833 None:intergenic
AGTTTGTTGCGTATCAAGAG+AGG 0.615599 1.3:+48371107 MS.gene24037:CDS
ACGATGGGTCAAGGAACTCC+CGG 0.616899 1.3:+48370857 None:intergenic
CCCGGTGACCGGAAACAAGA+CGG 0.618125 1.3:+48370902 MS.gene24037:CDS
CTCAGTCATGAAAGTCGAGA+AGG 0.618736 1.3:+48372736 MS.gene24037:CDS
GCAGCACCACCGGCGCGTGT+AGG 0.619998 1.3:+48370956 MS.gene24037:CDS
GAAGCCTCAGGAGGAGAAGG+CGG 0.620796 1.3:+48371132 MS.gene24037:CDS
CCCGGCGGCATGAACCGACA+AGG 0.629868 1.3:+48370875 MS.gene24037:CDS
TGGCATCAAGCCACCTAAGG+GGG 0.630368 1.3:+48372865 MS.gene24037:CDS
TGCATCAAAATAGCACAACC+AGG 0.642077 1.3:-48371313 None:intergenic
ATCTTCCTATCAATACGACC+AGG 0.647291 1.3:-48374023 None:intergenic
TTACGACCTACACGCGCCGG+TGG 0.648178 1.3:-48370962 None:intergenic
GAGATGGTCCAAAACTTGTG+AGG 0.650908 1.3:+48373642 MS.gene24037:CDS
CGGTATCGAAGTGCAAGCTG+AGG 0.651265 1.3:+48371038 MS.gene24037:CDS
TGTTTACGACCTACACGCGC+CGG 0.657461 1.3:-48370965 None:intergenic
TTCGATACCGGAGTCACCGT+CGG 0.658712 1.3:-48371025 None:intergenic
AGAGAGGTTGAAGCCTCAGG+AGG 0.663698 1.3:+48371123 MS.gene24037:CDS
TTTCATTGATGAAATTGATG+CGG 0.663748 1.3:+48373706 MS.gene24037:CDS
AATAGCAGGAGAAAGATCAT+CGG 0.664706 1.3:-48373681 None:intergenic
ATGTCAGCATAAGATTCCAA+AGG 0.668551 1.3:-48372761 None:intergenic
TTGATGCGGTCGGTACAAAG+AGG 0.668806 1.3:+48373720 MS.gene24037:CDS
GAGGCTGTTAAAGCTTGAGA+GGG 0.670530 1.3:+48371057 MS.gene24037:CDS
GAATTGATACAAAAGTACTT+GGG 0.673200 1.3:+48373620 MS.gene24037:CDS
TTGGCATCAAGCCACCTAAG+GGG 0.701914 1.3:+48372864 MS.gene24037:CDS
GATGAGTGTTGGGAATCTGG+AGG 0.708876 1.3:+48371195 MS.gene24037:CDS
TCTAAGGTTGATGATCTACG+TGG 0.778964 1.3:+48371166 MS.gene24037:CDS
ATGGGTCAAGGAACTCCCGG+CGG 0.785552 1.3:+48370860 MS.gene24037:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAATTAATAAATAAATCG+TGG + chr1.3:48374804-48374823 MS.gene24037:intron 10.0%
!!! AAAATGATTTTTTTCATTTT+TGG + chr1.3:48373167-48373186 MS.gene24037:intron 10.0%
!! AATAGTAAGATATCATAAAT+TGG - chr1.3:48375209-48375228 None:intergenic 15.0%
!! ATTTATATACAGCATTTATT+GGG + chr1.3:48374510-48374529 MS.gene24037:intron 15.0%
!! GAAATATTCTTTATAGAATT+AGG + chr1.3:48372599-48372618 MS.gene24037:intron 15.0%
!! TAAAAAAACATAAGATTGAT+AGG - chr1.3:48375131-48375150 None:intergenic 15.0%
!! TTTCAAAAAAGAGATTATAA+GGG + chr1.3:48371504-48371523 MS.gene24037:intron 15.0%
!!! ATAAATTTTTAACCTTCATT+CGG - chr1.3:48374347-48374366 None:intergenic 15.0%
!!! ATTATGATTGATTTTTTATC+AGG + chr1.3:48372667-48372686 MS.gene24037:intron 15.0%
!!! CATTATGATTTTGATTATAA+GGG + chr1.3:48371472-48371491 MS.gene24037:intron 15.0%
!!! CTTATTTTCATAAATTCTTT+AGG + chr1.3:48371633-48371652 MS.gene24037:intron 15.0%
!!! TCAATCTTATGTTTTTTTAA+AGG + chr1.3:48375132-48375151 MS.gene24037:intron 15.0%
!!! TCATTATGATTTTGATTATA+AGG + chr1.3:48371471-48371490 MS.gene24037:intron 15.0%
!!! TGTTGTTTTTATAATTTTGT+TGG + chr1.3:48371413-48371432 MS.gene24037:intron 15.0%
!!! TGTTTCATCTTTTAATATTA+GGG + chr1.3:48374725-48374744 MS.gene24037:intron 15.0%
!!! TTGTTTCATCTTTTAATATT+AGG + chr1.3:48374724-48374743 MS.gene24037:intron 15.0%
!!! TTTTATAATTTTGTTGGAAT+TGG + chr1.3:48371419-48371438 MS.gene24037:intron 15.0%
!! AAATTTGAATTGTTGATCTA+GGG + chr1.3:48371373-48371392 MS.gene24037:intron 20.0%
!! ATTTGATACCATACTATAAT+TGG + chr1.3:48372522-48372541 MS.gene24037:intron 20.0%
!! CATTTATATACAGCATTTAT+TGG + chr1.3:48374509-48374528 MS.gene24037:intron 20.0%
!! CTTTCAAAAAAGAGATTATA+AGG + chr1.3:48371503-48371522 MS.gene24037:intron 20.0%
!! TATATGAATCCTAAAATTGT+GGG - chr1.3:48373758-48373777 None:intergenic 20.0%
!!! ATAGTTAGAAAAAGTTTTGT+GGG - chr1.3:48375034-48375053 None:intergenic 20.0%
!!! ATGAAAATTAGGAAAAGTTT+TGG + chr1.3:48372574-48372593 MS.gene24037:intron 20.0%
!!! ATTCACTCTAGTTTTATAAA+AGG - chr1.3:48371954-48371973 None:intergenic 20.0%
!!! ATTCACTCTCATTTTATAAA+TGG - chr1.3:48371881-48371900 None:intergenic 20.0%
!!! CTTTTAGTATTAAGACAATA+AGG - chr1.3:48374606-48374625 None:intergenic 20.0%
!!! GATTTTATCTTTTGTTGATA+AGG + chr1.3:48371279-48371298 MS.gene24037:CDS 20.0%
!!! TAACTATAGTTACATTTTGT+AGG + chr1.3:48375047-48375066 MS.gene24037:intron 20.0%
!!! TATAAACATTTAAGCTGTTT+TGG - chr1.3:48371666-48371685 None:intergenic 20.0%
!!! TATAGTTAGAAAAAGTTTTG+TGG - chr1.3:48375035-48375054 None:intergenic 20.0%
!!! TTCACTCTAGTTTTATAAAA+GGG - chr1.3:48371953-48371972 None:intergenic 20.0%
!!! TTCACTCTCATTTTATAAAT+GGG - chr1.3:48371880-48371899 None:intergenic 20.0%
! AAAAACTAAGTTGTAGTTGT+TGG - chr1.3:48374688-48374707 None:intergenic 25.0%
! AAATTAAGATACACACATCA+AGG + chr1.3:48374205-48374224 MS.gene24037:intron 25.0%
! ACCCAAATATATTATGCTAA+GGG + chr1.3:48374440-48374459 MS.gene24037:intron 25.0%
! AGTAAGATATCATAAATTGG+AGG - chr1.3:48375206-48375225 None:intergenic 25.0%
! ATAACATGTCTATAAGTTGT+TGG + chr1.3:48371609-48371628 MS.gene24037:intron 25.0%
! ATAAGATTGATAGGTAAAGA+TGG - chr1.3:48375122-48375141 None:intergenic 25.0%
! ATAAGCACTTATATGATAAG+CGG + chr1.3:48371700-48371719 MS.gene24037:intron 25.0%
! ATACCATACTATAATTGGTT+TGG + chr1.3:48372527-48372546 MS.gene24037:intron 25.0%
! CAAATTATACAGACAATAAC+AGG - chr1.3:48372630-48372649 None:intergenic 25.0%
! CAATTAAACTCATGAATGTA+AGG - chr1.3:48373839-48373858 None:intergenic 25.0%
! CTATATGAATCCTAAAATTG+TGG - chr1.3:48373759-48373778 None:intergenic 25.0%
! GAAATTTGAATTGTTGATCT+AGG + chr1.3:48371372-48371391 MS.gene24037:intron 25.0%
! GTTTGATGTAACTAAAGTAT+GGG + chr1.3:48371791-48371810 MS.gene24037:intron 25.0%
! TAAGATTGATAGGTAAAGAT+GGG - chr1.3:48375121-48375140 None:intergenic 25.0%
! TAATTGTTAATATGCCTTAC+AGG + chr1.3:48373853-48373872 MS.gene24037:intron 25.0%
! TATAAAATGAGAGTGAATTG+AGG + chr1.3:48371883-48371902 MS.gene24037:intron 25.0%
! TGATTCACTGAAGTAAAAAT+TGG - chr1.3:48375095-48375114 None:intergenic 25.0%
! TGTTTGATGTAACTAAAGTA+TGG + chr1.3:48371790-48371809 MS.gene24037:intron 25.0%
! TTATAGAATTAGCTATCTCT+AGG + chr1.3:48372122-48372141 MS.gene24037:intron 25.0%
! TTTCATTGATGAAATTGATG+CGG + chr1.3:48373706-48373725 MS.gene24037:CDS 25.0%
!! GACTTATTTGAGTTTACTTT+GGG + chr1.3:48371539-48371558 MS.gene24037:intron 25.0%
!! GATAAATACTGTATTGATAC+TGG + chr1.3:48373285-48373304 MS.gene24037:intron 25.0%
!! GATTTGTCTGTATTATCTTT+TGG + chr1.3:48375154-48375173 MS.gene24037:intron 25.0%
!! TACCATACTATAATTGGTTT+GGG + chr1.3:48372528-48372547 MS.gene24037:intron 25.0%
!! TGACTTATTTGAGTTTACTT+TGG + chr1.3:48371538-48371557 MS.gene24037:intron 25.0%
!! TTAAGTTGTTTATCCAAACA+AGG + chr1.3:48371742-48371761 MS.gene24037:intron 25.0%
!! TTCATCTTTTAATATTAGGG+TGG + chr1.3:48374728-48374747 MS.gene24037:intron 25.0%
!!! AATTTTAGGATTCATATAGG+TGG + chr1.3:48373760-48373779 MS.gene24037:intron 25.0%
!!! ATTGCTTTTATATCTTGTTC+AGG + chr1.3:48375226-48375245 MS.gene24037:intron 25.0%
!!! ATTTTAGGATTCATATAGGT+GGG + chr1.3:48373761-48373780 MS.gene24037:intron 25.0%
!!! CACAATTTTAGGATTCATAT+AGG + chr1.3:48373757-48373776 MS.gene24037:intron 25.0%
!!! GAATTGATACAAAAGTACTT+GGG + chr1.3:48373620-48373639 MS.gene24037:CDS 25.0%
!!! GATTTTTTATCAGGTTCTAT+CGG + chr1.3:48372676-48372695 MS.gene24037:intron 25.0%
!!! TGAATTGATACAAAAGTACT+TGG + chr1.3:48373619-48373638 MS.gene24037:CDS 25.0%
!!! TGCTATTTTGATGCATAATA+AGG + chr1.3:48371321-48371340 MS.gene24037:CDS 25.0%
!!! TTGTTTACAATGTTACTTTC+TGG + chr1.3:48373086-48373105 MS.gene24037:intron 25.0%
!!! TTTTGTTGATAAGGATCAAT+TGG + chr1.3:48371288-48371307 MS.gene24037:CDS 25.0%
AAAATCCCAACATAATACTC+CGG - chr1.3:48371265-48371284 None:intergenic 30.0%
AAGATGAAAATCTCTGTGTT+TGG + chr1.3:48373201-48373220 MS.gene24037:intron 30.0%
AAGCTCATTACTTCTTCAAA+AGG - chr1.3:48372501-48372520 None:intergenic 30.0%
AGATGAAAATCTCTGTGTTT+GGG + chr1.3:48373202-48373221 MS.gene24037:intron 30.0%
AGCAACCTAAAAAATTTGCA+TGG + chr1.3:48374577-48374596 MS.gene24037:intron 30.0%
ATACAGCATTTATTGGGTTA+GGG + chr1.3:48374516-48374535 MS.gene24037:intron 30.0%
ATATAGTTCAGGATGTGTAA+GGG - chr1.3:48372837-48372856 None:intergenic 30.0%
ATCAAGACTTTCAATTCTGT+TGG - chr1.3:48373988-48374007 None:intergenic 30.0%
ATTATCAGATCTGTAGAGTT+TGG + chr1.3:48373038-48373057 MS.gene24037:intron 30.0%
CAAAACTAATCATGTTTACC+TGG - chr1.3:48374091-48374110 None:intergenic 30.0%
CCAATATCTTCATATAGTTC+AGG - chr1.3:48372848-48372867 None:intergenic 30.0%
CCTGAACTATATGAAGATAT+TGG + chr1.3:48372845-48372864 MS.gene24037:CDS 30.0%
GAATCAACAGAAACAACATT+AGG - chr1.3:48374119-48374138 None:intergenic 30.0%
GACCCAAATATATTATGCTA+AGG + chr1.3:48374439-48374458 MS.gene24037:intron 30.0%
GCCCTTAGCATAATATATTT+GGG - chr1.3:48374444-48374463 None:intergenic 30.0%
GCTAATAAGCCAAAAAGATA+CGG - chr1.3:48371768-48371787 None:intergenic 30.0%
GGTAACTTGAGTGTATATTT+AGG + chr1.3:48375068-48375087 MS.gene24037:intron 30.0%
GTCAAAACTAGCAAGTTAAT+AGG - chr1.3:48374400-48374419 None:intergenic 30.0%
GTGATGTTTAAGAAGAAAGA+AGG + chr1.3:48375284-48375303 MS.gene24037:CDS 30.0%
TATAAAACTAGAGTGAATCG+AGG + chr1.3:48371956-48371975 MS.gene24037:intron 30.0%
TATACAGCATTTATTGGGTT+AGG + chr1.3:48374515-48374534 MS.gene24037:intron 30.0%
TCAATAATGAATCAATGCTG+TGG + chr1.3:48372965-48372984 MS.gene24037:intron 30.0%
TCATCAATGAAAACAATAGC+AGG - chr1.3:48373698-48373717 None:intergenic 30.0%
TGCTTCTTACTAATACAACT+TGG - chr1.3:48373407-48373426 None:intergenic 30.0%
TTGAACCTGGAATGAAAATT+AGG + chr1.3:48372563-48372582 MS.gene24037:intron 30.0%
TTGAATCAAAACCATCTAAC+TGG - chr1.3:48373938-48373957 None:intergenic 30.0%
! AGAGATTATAAGGGTTTGTT+TGG + chr1.3:48371513-48371532 MS.gene24037:intron 30.0%
! ATTCCTTATGTACTGTTTTG+GGG + chr1.3:48373233-48373252 MS.gene24037:intron 30.0%
! CTTTTCCTAATTTTCATTCC+AGG - chr1.3:48372571-48372590 None:intergenic 30.0%
! GATTCCTTATGTACTGTTTT+GGG + chr1.3:48373232-48373251 MS.gene24037:intron 30.0%
! TGCATATTTAAGATACCACA+TGG - chr1.3:48374141-48374160 None:intergenic 30.0%
! TTAAAGAAGCAGCAGTTTTT+CGG - chr1.3:48373451-48373470 None:intergenic 30.0%
!!! CTCATTTTATAAATGGGTTG+AGG - chr1.3:48371874-48371893 None:intergenic 30.0%
!!! TTAGATGGTTTTGATTCAAG+AGG + chr1.3:48373939-48373958 MS.gene24037:CDS 30.0%
!!! TTTTAGGATTCATATAGGTG+GGG + chr1.3:48373762-48373781 MS.gene24037:intron 30.0%
AAGCGCATAAATTCATCGAA+AGG - chr1.3:48372060-48372079 None:intergenic 35.0%
AAGTGCTTGTTTGATTCTAC+TGG + chr1.3:48374939-48374958 MS.gene24037:intron 35.0%
AAGTTGTAGTTGTTGGAACT+GGG - chr1.3:48374681-48374700 None:intergenic 35.0%
AATAGCAGGAGAAAGATCAT+CGG - chr1.3:48373684-48373703 None:intergenic 35.0%
ACTTCTTCAAAAGGATACGA+AGG - chr1.3:48372492-48372511 None:intergenic 35.0%
AGGAGATGTAAAAGTGATTC+TGG + chr1.3:48373959-48373978 MS.gene24037:CDS 35.0%
AGTGCTTGTTTGATTCTACT+GGG + chr1.3:48374940-48374959 MS.gene24037:intron 35.0%
ATCACTTCATGGACTCTTTA+AGG + chr1.3:48373807-48373826 MS.gene24037:intron 35.0%
ATCCTTTGCCTTCTTAAAGT+CGG - chr1.3:48375261-48375280 None:intergenic 35.0%
ATGAAAATCTCTGTGTTTGG+GGG + chr1.3:48373204-48373223 MS.gene24037:intron 35.0%
ATGTCAGCATAAGATTCCAA+AGG - chr1.3:48372764-48372783 None:intergenic 35.0%
ATTCATCGAAAGGAGATGAA+TGG - chr1.3:48372050-48372069 None:intergenic 35.0%
ATTGATGAAATTGATGCGGT+CGG + chr1.3:48373710-48373729 MS.gene24037:CDS 35.0%
CATATAGTTCAGGATGTGTA+AGG - chr1.3:48372838-48372857 None:intergenic 35.0%
CGCCCTTAGCATAATATATT+TGG - chr1.3:48374445-48374464 None:intergenic 35.0%
CGTAAACAACGCAAACAAAA+GGG + chr1.3:48370980-48370999 MS.gene24037:CDS 35.0%
CTCAGATATCCTGTCAATAT+AGG - chr1.3:48374970-48374989 None:intergenic 35.0%
CTCCCAAACCAATTATAGTA+TGG - chr1.3:48372533-48372552 None:intergenic 35.0%
GATGAAAATCTCTGTGTTTG+GGG + chr1.3:48373203-48373222 MS.gene24037:intron 35.0%
GATGTAACTAAAGTATGGGA+GGG + chr1.3:48371795-48371814 MS.gene24037:intron 35.0%
GCAGATTCAGGAAATTAAAG+AGG + chr1.3:48372799-48372818 MS.gene24037:CDS 35.0%
GTCATATTATATGGAGAACC+TGG + chr1.3:48372887-48372906 MS.gene24037:CDS 35.0%
TAAGTTGTAGTTGTTGGAAC+TGG - chr1.3:48374682-48374701 None:intergenic 35.0%
TATAGTTCAGGATGTGTAAG+GGG - chr1.3:48372836-48372855 None:intergenic 35.0%
TCGTAAACAACGCAAACAAA+AGG + chr1.3:48370979-48370998 MS.gene24037:CDS 35.0%
TGATCCAAAAGAACAAAAGC+AGG - chr1.3:48374864-48374883 None:intergenic 35.0%
TGATGCATTGTATCACTTCA+TGG + chr1.3:48373796-48373815 MS.gene24037:intron 35.0%
TGATGTAACTAAAGTATGGG+AGG + chr1.3:48371794-48371813 MS.gene24037:intron 35.0%
TGTTTAATGTGACTGGGAAT+GGG + chr1.3:48372418-48372437 MS.gene24037:intron 35.0%
TTCATCGAAAGGAGATGAAT+GGG - chr1.3:48372049-48372068 None:intergenic 35.0%
TTGGAATCTTATGCTGACAT+TGG + chr1.3:48372764-48372783 MS.gene24037:CDS 35.0%
! AAAAGTTCCCTCACAAGTTT+TGG - chr1.3:48373653-48373672 None:intergenic 35.0%
! AACAAGAAGACGTATTTTCC+AGG + chr1.3:48374070-48374089 MS.gene24037:CDS 35.0%
! GAAGGATTATTTGTTGATGG+AGG + chr1.3:48371081-48371100 MS.gene24037:CDS 35.0%
! GGATTCCTTATGTACTGTTT+TGG + chr1.3:48373231-48373250 MS.gene24037:intron 35.0%
! GGTGAAGGATTATTTGTTGA+TGG + chr1.3:48371078-48371097 MS.gene24037:CDS 35.0%
! TTTAGGATTCATATAGGTGG+GGG + chr1.3:48373763-48373782 MS.gene24037:intron 35.0%
!! AGCACTTTTTATTCTGACAC+TGG - chr1.3:48374926-48374945 None:intergenic 35.0%
!! AGTTGCTGTTTAATGTGACT+GGG + chr1.3:48372412-48372431 MS.gene24037:intron 35.0%
!! ATACAAAAGTACTTGGGAGA+TGG + chr1.3:48373626-48373645 MS.gene24037:CDS 35.0%
!! ATTCTCTGGAGCTGATATAA+AGG + chr1.3:48374281-48374300 MS.gene24037:CDS 35.0%
!! ATTTGCTGTTTAAGGTAGAC+TGG + chr1.3:48371989-48372008 MS.gene24037:intron 35.0%
!! GCATGTCTTGACTTTAGAAT+GGG + chr1.3:48374996-48375015 MS.gene24037:intron 35.0%
!! GGAAGAATTTGTTATGACGA+AGG + chr1.3:48374254-48374273 MS.gene24037:CDS 35.0%
!! TAGTTGCTGTTTAATGTGAC+TGG + chr1.3:48372411-48372430 MS.gene24037:intron 35.0%
!! TCATGCTATTGTTTCGAGTT+CGG + chr1.3:48371234-48371253 MS.gene24037:CDS 35.0%
!! TCGGAGTAATTTGCTGTTTA+AGG + chr1.3:48371981-48372000 MS.gene24037:intron 35.0%
!! TTCCTTATGTACTGTTTTGG+GGG + chr1.3:48373234-48373253 MS.gene24037:intron 35.0%
!! TTGTTTCTGTTGATTCCATG+TGG + chr1.3:48374123-48374142 MS.gene24037:intron 35.0%
!! TTTGCTGTTTAAGGTAGACT+GGG + chr1.3:48371990-48372009 MS.gene24037:intron 35.0%
!!! CGTCTTCTTGTTTTGATATC+AGG - chr1.3:48374062-48374081 None:intergenic 35.0%
!!! CTTGTTTTGATATCAGGAAG+AGG - chr1.3:48374056-48374075 None:intergenic 35.0%
!!! GGATGCCATGCAAATTTTTT+AGG - chr1.3:48374585-48374604 None:intergenic 35.0%
AAAAACATGCACACTCGCAA+AGG - chr1.3:48373338-48373357 None:intergenic 40.0%
AAGGCAATATGTACTGAAGC+TGG + chr1.3:48374300-48374319 MS.gene24037:CDS 40.0%
ACTTTCATGACTGAGACCAT+TGG - chr1.3:48372731-48372750 None:intergenic 40.0%
AGACTGTTTGAGGGAGATTA+TGG + chr1.3:48371577-48371596 MS.gene24037:intron 40.0%
AGATGGTCCAAAACTTGTGA+GGG + chr1.3:48373643-48373662 MS.gene24037:CDS 40.0%
AGTTCAAACCTTTGCAAGCA+AGG - chr1.3:48372924-48372943 None:intergenic 40.0%
ATATTATGCTAAGGGCGAGT+TGG + chr1.3:48374448-48374467 MS.gene24037:intron 40.0%
ATCTTCCTATCAATACGACC+AGG - chr1.3:48374026-48374045 None:intergenic 40.0%
ATGACGAAGGATGAATTCTC+TGG + chr1.3:48374267-48374286 MS.gene24037:CDS 40.0%
CATCACATGCACTATCAGTT+AGG + chr1.3:48373523-48373542 MS.gene24037:intron 40.0%
CCATATAATATGACCCCCTT+AGG - chr1.3:48372881-48372900 None:intergenic 40.0%
CCTAAGGGGGTCATATTATA+TGG + chr1.3:48372878-48372897 MS.gene24037:CDS 40.0%
CTGTTTAATGTGACTGGGAA+TGG + chr1.3:48372417-48372436 MS.gene24037:intron 40.0%
GAATCTTATGCTGACATTGG+TGG + chr1.3:48372767-48372786 MS.gene24037:CDS 40.0%
GTGGAGAACGTGAAATTCAA+AGG + chr1.3:48373892-48373911 MS.gene24037:CDS 40.0%
TATAATATGACCCCCTTAGG+TGG - chr1.3:48372878-48372897 None:intergenic 40.0%
TATTATGCTAAGGGCGAGTT+GGG + chr1.3:48374449-48374468 MS.gene24037:intron 40.0%
TCCTTTGCCTTCTTAAAGTC+GGG - chr1.3:48375260-48375279 None:intergenic 40.0%
TGAAAATCTCTGTGTTTGGG+GGG + chr1.3:48373205-48373224 MS.gene24037:intron 40.0%
TGCATCAAAATAGCACAACC+AGG - chr1.3:48371316-48371335 None:intergenic 40.0%
TTATATGGAGAACCTGGAAC+AGG + chr1.3:48372893-48372912 MS.gene24037:CDS 40.0%
! ACTAGCTGATGATGTCAACT+TGG + chr1.3:48374233-48374252 MS.gene24037:CDS 40.0%
! CAAACAAGGCCGTATCTTTT+TGG + chr1.3:48371756-48371775 MS.gene24037:intron 40.0%
! CTAACTGATAGTGCATGTGA+TGG - chr1.3:48373525-48373544 None:intergenic 40.0%
! GAGCATCTGAATTTTGAACC+TGG + chr1.3:48372550-48372569 MS.gene24037:intron 40.0%
! GCTATTTGTCTGTTGCTTAC+AGG + chr1.3:48373123-48373142 MS.gene24037:intron 40.0%
! GGCATGTCTTGACTTTAGAA+TGG + chr1.3:48374995-48375014 MS.gene24037:intron 40.0%
! GTTTAAGGTAGACTGGGAAT+GGG + chr1.3:48371996-48372015 MS.gene24037:intron 40.0%
! TATCAGGTTCTATCGGTTGT+TGG + chr1.3:48372683-48372702 MS.gene24037:intron 40.0%
! TGTTTAAGGTAGACTGGGAA+TGG + chr1.3:48371995-48372014 MS.gene24037:intron 40.0%
!! AAATCGTGGAAAGTACTCCT+TGG + chr1.3:48374818-48374837 MS.gene24037:intron 40.0%
!! AGTTTGTTGCGTATCAAGAG+AGG + chr1.3:48371107-48371126 MS.gene24037:CDS 40.0%
!! CAAAAAGACAAGGCCTTGTT+TGG - chr1.3:48372284-48372303 None:intergenic 40.0%
!! CAAAAAGATACGGCCTTGTT+TGG - chr1.3:48371758-48371777 None:intergenic 40.0%
!! CAAACAAGGCCTTGTCTTTT+TGG + chr1.3:48372282-48372301 MS.gene24037:intron 40.0%
!! CTATTGTTTCGAGTTCGGTT+GGG + chr1.3:48371239-48371258 MS.gene24037:CDS 40.0%
!! TCTAAGGTTGATGATCTACG+TGG + chr1.3:48371166-48371185 MS.gene24037:CDS 40.0%
!! TGTTGCTTACAGGTACTGAA+GGG + chr1.3:48373133-48373152 MS.gene24037:intron 40.0%
ACAACGCAAACAAAAGGGTC+CGG + chr1.3:48370985-48371004 MS.gene24037:CDS 45.0%
ACACTGGAATCTTCCCAGTT+GGG - chr1.3:48374910-48374929 None:intergenic 45.0%
ACTAGAGTGAATCGAGGCAT+CGG + chr1.3:48371962-48371981 MS.gene24037:intron 45.0%
AGGAAAGACCTTGCTTGCAA+AGG + chr1.3:48372913-48372932 MS.gene24037:CDS 45.0%
ATACATGCTCTTGTGCCTTC+AGG + chr1.3:48373550-48373569 MS.gene24037:intron 45.0%
ATCATCATACTTTCCCGCGA+GGG + chr1.3:48374880-48374899 MS.gene24037:intron 45.0%
ATTAGTCGCGAGACTGTTTG+AGG + chr1.3:48371567-48371586 MS.gene24037:intron 45.0%
ATTATGCTAAGGGCGAGTTG+GGG + chr1.3:48374450-48374469 MS.gene24037:intron 45.0%
ATTGGCATCAAGCCACCTAA+GGG + chr1.3:48372863-48372882 MS.gene24037:CDS 45.0%
CACCCCCAAAACAGTACATA+AGG - chr1.3:48373239-48373258 None:intergenic 45.0%
CTAAAGTCAAGACATGCCTC+AGG - chr1.3:48374993-48375012 None:intergenic 45.0%
CTCAGTCATGAAAGTCGAGA+AGG + chr1.3:48372736-48372755 MS.gene24037:CDS 45.0%
CTGGGTAGTCCTATATTGAC+AGG + chr1.3:48374958-48374977 MS.gene24037:intron 45.0%
GAGATGGTCCAAAACTTGTG+AGG + chr1.3:48373642-48373661 MS.gene24037:CDS 45.0%
GAGGCTGTTAAAGCTTGAGA+GGG + chr1.3:48371057-48371076 MS.gene24037:CDS 45.0%
GAGTGAGCATCATACCTGTA+AGG - chr1.3:48373870-48373889 None:intergenic 45.0%
GAGTTGCTGAACCAGTTAGA+TGG + chr1.3:48373924-48373943 MS.gene24037:CDS 45.0%
GATAAGGATCAATTGGAGCC+TGG + chr1.3:48371295-48371314 MS.gene24037:CDS 45.0%
GATCAACTTCGTCTTGCAGA+AGG - chr1.3:48372709-48372728 None:intergenic 45.0%
GCTAACGAGCCAAAAAGACA+AGG - chr1.3:48372294-48372313 None:intergenic 45.0%
GCTACATTCTTGCGTGTAGT+AGG + chr1.3:48373593-48373612 MS.gene24037:CDS 45.0%
GGAGGGTTGAGAATTAAGAG+TGG + chr1.3:48371812-48371831 MS.gene24037:intron 45.0%
GTTAAAGCTTGAGAGGGTGA+AGG + chr1.3:48371063-48371082 MS.gene24037:CDS 45.0%
TACAGGTATGATGCTCACTC+AGG + chr1.3:48373870-48373889 MS.gene24037:intron 45.0%
TACCAGCCACACTGTAATTG+CGG + chr1.3:48372087-48372106 MS.gene24037:intron 45.0%
TAGTTGTTGGAACTGGGAAG+AGG - chr1.3:48374675-48374694 None:intergenic 45.0%
TATTGGCATCAAGCCACCTA+AGG + chr1.3:48372862-48372881 MS.gene24037:CDS 45.0%
TCCAGATTCCCAACACTCAT+CGG - chr1.3:48371196-48371215 None:intergenic 45.0%
TCTCAACCGCAATTACAGTG+TGG - chr1.3:48372096-48372115 None:intergenic 45.0%
TGAGGCTGTTAAAGCTTGAG+AGG + chr1.3:48371056-48371075 MS.gene24037:CDS 45.0%
TGGTTTAGATGCGCAGATTC+AGG + chr1.3:48372787-48372806 MS.gene24037:CDS 45.0%
TTAGTCGCGAGACTGTTTGA+GGG + chr1.3:48371568-48371587 MS.gene24037:intron 45.0%
! AAGCTGGCTTACTTGCTCTA+AGG + chr1.3:48374316-48374335 MS.gene24037:CDS 45.0%
! ACAGTTTGCTCTTCTGTCTG+TGG + chr1.3:48373371-48373390 MS.gene24037:intron 45.0%
! AGCTGGCTTACTTGCTCTAA+GGG + chr1.3:48374317-48374336 MS.gene24037:CDS 45.0%
! ATTGGGTTAGGGTTGTCTGT+GGG + chr1.3:48374527-48374546 MS.gene24037:intron 45.0%
! GACTCATCCCGACTTTAAGA+AGG + chr1.3:48375250-48375269 MS.gene24037:CDS 45.0%
! GCAAGACGAAGTTGATCCAA+TGG + chr1.3:48372712-48372731 MS.gene24037:CDS 45.0%
! GCTGCTGAACCCACAATTTT+AGG + chr1.3:48373746-48373765 MS.gene24037:intron 45.0%
! TACGACCTGGTCGTATTGAT+AGG + chr1.3:48374018-48374037 MS.gene24037:CDS 45.0%
! TATTGGGTTAGGGTTGTCTG+TGG + chr1.3:48374526-48374545 MS.gene24037:intron 45.0%
! TCCCGACTTTAAGAAGGCAA+AGG + chr1.3:48375256-48375275 MS.gene24037:CDS 45.0%
! TGCTGTTTGAGAGTTGAGAG+CGG + chr1.3:48371919-48371938 MS.gene24037:intron 45.0%
! TTGGGCCGGAGTATTATGTT+GGG + chr1.3:48371257-48371276 MS.gene24037:CDS 45.0%
!! AAGAAAGAAGGAGTGCCAGA+AGG + chr1.3:48375296-48375315 MS.gene24037:CDS 45.0%
!! CTGTTGCTTACAGGTACTGA+AGG + chr1.3:48373132-48373151 MS.gene24037:intron 45.0%
!! GCTATTGTTTCGAGTTCGGT+TGG + chr1.3:48371238-48371257 MS.gene24037:CDS 45.0%
!!! CTTATGTACTGTTTTGGGGG+TGG + chr1.3:48373237-48373256 MS.gene24037:intron 45.0%
!!! GGTGTTTTAAAGAGGCACCA+AGG - chr1.3:48374838-48374857 None:intergenic 45.0%
AACCGCAATTACAGTGTGGC+TGG - chr1.3:48372092-48372111 None:intergenic 50.0%
AGCAAGGTCTTTCCTGTTCC+AGG - chr1.3:48372908-48372927 None:intergenic 50.0%
AGGTATGATGCTCACTCAGG+TGG + chr1.3:48373873-48373892 MS.gene24037:intron 50.0%
ATCTCTGTGTTTGGGGGGAT+TGG + chr1.3:48373210-48373229 MS.gene24037:intron 50.0%
ATGCAGCGCAACTGAAGTGT+GGG + chr1.3:48372322-48372341 MS.gene24037:intron 50.0%
CTCAGCTTGCACTTCGATAC+CGG - chr1.3:48371040-48371059 None:intergenic 50.0%
GAAAGTCGAGAAGGCTCCTT+TGG + chr1.3:48372745-48372764 MS.gene24037:CDS 50.0%
GACACTGGAATCTTCCCAGT+TGG - chr1.3:48374911-48374930 None:intergenic 50.0%
GATCATCATACTTTCCCGCG+AGG + chr1.3:48374879-48374898 MS.gene24037:intron 50.0%
GGCGGAGGAAGATAGATCTA+AGG + chr1.3:48371150-48371169 MS.gene24037:CDS 50.0%
TAGACTGGGAATGGGAGTTG+TGG + chr1.3:48372004-48372023 MS.gene24037:intron 50.0%
TCAAGAGAGGTTGAAGCCTC+AGG + chr1.3:48371120-48371139 MS.gene24037:CDS 50.0%
TCTAAGGGAACGCCGAATGA+AGG + chr1.3:48374332-48374351 MS.gene24037:CDS 50.0%
TGACAGGATATCTGAGCCTG+AGG + chr1.3:48374974-48374993 MS.gene24037:intron 50.0%
TTGAGTTTGCCACAGCCTGA+AGG - chr1.3:48373568-48373587 None:intergenic 50.0%
TTGATGCGGTCGGTACAAAG+AGG + chr1.3:48373720-48373739 MS.gene24037:CDS 50.0%
TTGGCATCAAGCCACCTAAG+GGG + chr1.3:48372864-48372883 MS.gene24037:CDS 50.0%
TTGTTGGAACTGGGAAGAGG+TGG - chr1.3:48374672-48374691 None:intergenic 50.0%
! GTTGGGCCGGAGTATTATGT+TGG + chr1.3:48371256-48371275 MS.gene24037:CDS 50.0%
!! GAGTTGGGGTGGATTGGTTA+TGG + chr1.3:48374464-48374483 MS.gene24037:intron 50.0%
!! GATGAGTGTTGGGAATCTGG+AGG + chr1.3:48371195-48371214 MS.gene24037:CDS 50.0%
!! GGACGGTTGAGAGTTGATAG+TGG + chr1.3:48372343-48372362 MS.gene24037:intron 50.0%
!! TATCGCTGCCGTCTTGTTTC+CGG - chr1.3:48370913-48370932 None:intergenic 50.0%
AGAGAGGTTGAAGCCTCAGG+AGG + chr1.3:48371123-48371142 MS.gene24037:CDS 55.0%
AGCGCAACTGAAGTGTGGGA+CGG + chr1.3:48372326-48372345 MS.gene24037:intron 55.0%
ATGAACCGACAAGGCCATCC+CGG + chr1.3:48370884-48370903 MS.gene24037:CDS 55.0%
ATTCGAACCAGCAGCACCAC+CGG + chr1.3:48370946-48370965 MS.gene24037:CDS 55.0%
GATCCAGCTTTGCTACGACC+TGG + chr1.3:48374005-48374024 MS.gene24037:CDS 55.0%
GATGCAGCGCAACTGAAGTG+TGG + chr1.3:48372321-48372340 MS.gene24037:intron 55.0%
GTTAGGGTTGTCTGTGGGTG+TGG + chr1.3:48374532-48374551 MS.gene24037:intron 55.0%
GTTGAAGCCTCAGGAGGAGA+AGG + chr1.3:48371129-48371148 MS.gene24037:CDS 55.0%
TCATACTTTCCCGCGAGGGA+TGG + chr1.3:48374884-48374903 MS.gene24037:intron 55.0%
TGGCATCAAGCCACCTAAGG+GGG + chr1.3:48372865-48372884 MS.gene24037:CDS 55.0%
TGTTTACGACCTACACGCGC+CGG - chr1.3:48370968-48370987 None:intergenic 55.0%
TTCGATACCGGAGTCACCGT+CGG - chr1.3:48371028-48371047 None:intergenic 55.0%
! CGGTATCGAAGTGCAAGCTG+AGG + chr1.3:48371038-48371057 MS.gene24037:CDS 55.0%
!! GCCGATGAGTGTTGGGAATC+TGG + chr1.3:48371192-48371211 MS.gene24037:CDS 55.0%
!! TGTTTCGAGTTCGGTTGGGC+CGG + chr1.3:48371243-48371262 MS.gene24037:CDS 55.0%
ACGGTTACCGACGGTGACTC+CGG + chr1.3:48371018-48371037 MS.gene24037:CDS 60.0%
ATGGGTCAAGGAACTCCCGG+CGG + chr1.3:48370860-48370879 MS.gene24037:CDS 60.0%
CACCGTCGGTAACCGTGAAG+CGG - chr1.3:48371014-48371033 None:intergenic 60.0%
CCCGGTGACCGGAAACAAGA+CGG + chr1.3:48370902-48370921 MS.gene24037:CDS 60.0%
CGACCAGGTCGTAGCAAAGC+TGG - chr1.3:48374011-48374030 None:intergenic 60.0%
CTTGTTTCCGGTCACCGGGA+TGG - chr1.3:48370901-48370920 None:intergenic 60.0%
GAAGCCTCAGGAGGAGAAGG+CGG + chr1.3:48371132-48371151 MS.gene24037:CDS 60.0%
GCTCTTGTGCCTTCAGGCTG+TGG + chr1.3:48373556-48373575 MS.gene24037:intron 60.0%
GGTAACCGTGAAGCGGCATC+CGG - chr1.3:48371007-48371026 None:intergenic 60.0%
GTGACTGGGAATGGGAGTCG+AGG + chr1.3:48372426-48372445 MS.gene24037:intron 60.0%
GTGGCTCGCCGATGAGTGTT+GGG + chr1.3:48371185-48371204 MS.gene24037:CDS 60.0%
! AAGGGCGAGTTGGGGTGGAT+TGG + chr1.3:48374458-48374477 MS.gene24037:intron 60.0%
! ATGCTAAGGGCGAGTTGGGG+TGG + chr1.3:48374453-48374472 MS.gene24037:intron 60.0%
! TGCCGCTTCACGGTTACCGA+CGG + chr1.3:48371009-48371028 MS.gene24037:CDS 60.0%
!! CCGTCTTGTTTCCGGTCACC+GGG - chr1.3:48370905-48370924 None:intergenic 60.0%
!! GCCGTCTTGTTTCCGGTCAC+CGG - chr1.3:48370906-48370925 None:intergenic 60.0%
CGTGGCTCGCCGATGAGTGT+TGG + chr1.3:48371184-48371203 MS.gene24037:CDS 65.0%
GACAAGGCCATCCCGGTGAC+CGG + chr1.3:48370891-48370910 MS.gene24037:CDS 65.0%
TCCTCCGCCTTCTCCTCCTG+AGG - chr1.3:48371139-48371158 None:intergenic 65.0%
TTACGACCTACACGCGCCGG+TGG - chr1.3:48370965-48370984 None:intergenic 65.0%
! AGGGTCCGGATGCCGCTTCA+CGG + chr1.3:48370999-48371018 MS.gene24037:CDS 65.0%
!! CCTTGTCGGTTCATGCCGCC+GGG - chr1.3:48370878-48370897 None:intergenic 65.0%
!! GCCTTGTCGGTTCATGCCGC+CGG - chr1.3:48370879-48370898 None:intergenic 65.0%
!! GGTCACCGGGATGGCCTTGT+CGG - chr1.3:48370892-48370911 None:intergenic 65.0%
CCAGTTGGGCCATCCCTCGC+GGG - chr1.3:48374896-48374915 None:intergenic 70.0%
CCCAGTTGGGCCATCCCTCG+CGG - chr1.3:48374897-48374916 None:intergenic 70.0%
CCCGGCGGCATGAACCGACA+AGG + chr1.3:48370875-48370894 MS.gene24037:CDS 70.0%
CCGCGAGGGATGGCCCAACT+GGG + chr1.3:48374894-48374913 MS.gene24037:intron 70.0%
GCCTCAGGAGGAGAAGGCGG+AGG + chr1.3:48371135-48371154 MS.gene24037:CDS 70.0%
CCCGCGAGGGATGGCCCAAC+TGG + chr1.3:48374893-48374912 MS.gene24037:intron 75.0%
GCAGCACCACCGGCGCGTGT+AGG + chr1.3:48370956-48370975 MS.gene24037:CDS 75.0%
!! ACACGCGCCGGTGGTGCTGC+TGG - chr1.3:48370956-48370975 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 48370860 48375331 48370860 ID=MS.gene24037
chr1.3 mRNA 48370860 48375331 48370860 ID=MS.gene24037.t1;Parent=MS.gene24037
chr1.3 exon 48370860 48371342 48370860 ID=MS.gene24037.t1.exon1;Parent=MS.gene24037.t1
chr1.3 CDS 48370860 48371342 48370860 ID=cds.MS.gene24037.t1;Parent=MS.gene24037.t1
chr1.3 exon 48372689 48372934 48372689 ID=MS.gene24037.t1.exon2;Parent=MS.gene24037.t1
chr1.3 CDS 48372689 48372934 48372689 ID=cds.MS.gene24037.t1;Parent=MS.gene24037.t1
chr1.3 exon 48373572 48373741 48373572 ID=MS.gene24037.t1.exon3;Parent=MS.gene24037.t1
chr1.3 CDS 48373572 48373741 48373572 ID=cds.MS.gene24037.t1;Parent=MS.gene24037.t1
chr1.3 exon 48373875 48374091 48373875 ID=MS.gene24037.t1.exon4;Parent=MS.gene24037.t1
chr1.3 CDS 48373875 48374091 48373875 ID=cds.MS.gene24037.t1;Parent=MS.gene24037.t1
chr1.3 exon 48374213 48374353 48374213 ID=MS.gene24037.t1.exon5;Parent=MS.gene24037.t1
chr1.3 CDS 48374213 48374353 48374213 ID=cds.MS.gene24037.t1;Parent=MS.gene24037.t1
chr1.3 exon 48375248 48375331 48375248 ID=MS.gene24037.t1.exon6;Parent=MS.gene24037.t1
chr1.3 CDS 48375248 48375331 48375248 ID=cds.MS.gene24037.t1;Parent=MS.gene24037.t1
Gene Sequence

>MS.gene24037

ATGGGTCAAGGAACTCCCGGCGGCATGAACCGACAAGGCCATCCCGGTGACCGGAAACAAGACGGCAGCGATAAAAAAGAAAAGAAATTCGAACCAGCAGCACCACCGGCGCGTGTAGGTCGTAAACAACGCAAACAAAAGGGTCCGGATGCCGCTTCACGGTTACCGACGGTGACTCCGGTATCGAAGTGCAAGCTGAGGCTGTTAAAGCTTGAGAGGGTGAAGGATTATTTGTTGATGGAGGAAGAGTTTGTTGCGTATCAAGAGAGGTTGAAGCCTCAGGAGGAGAAGGCGGAGGAAGATAGATCTAAGGTTGATGATCTACGTGGCTCGCCGATGAGTGTTGGGAATCTGGAGGAATTGATTGATGAGAATCATGCTATTGTTTCGAGTTCGGTTGGGCCGGAGTATTATGTTGGGATTTTATCTTTTGTTGATAAGGATCAATTGGAGCCTGGTTGTGCTATTTTGATGCATAATAAGGTATTTCTTAATTGTTGAATTTTTTGTGTGAAATTTGAATTGTTGATCTAGGGTTTTAATTTAGAGAATATGTTGTTTTTATAATTTTGTTGGAATTGGATGCATATGAAGAAATATATTAAGTTCTATCATTATGATTTTGATTATAAGGGTTTGTTTTCTTTCAAAAAAGAGATTATAAGGGTTTGTTTGGATTGACTTATTTGAGTTTACTTTGGGACATAATTAGTCGCGAGACTGTTTGAGGGAGATTATGGAAACAACTGATAACATGTCTATAAGTTGTTGGACTTATTTTCATAAATTCTTTAGGATAGCTTCCAAAACAGCTTAAATGTTTATATGAAATAGTTATACATAAGCACTTATATGATAAGCGGTTATGCTGTAAGTGTTTAATTAAGTTGTTTATCCAAACAAGGCCGTATCTTTTTGGCTTATTAGCTATGTTTGATGTAACTAAAGTATGGGAGGGTTGAGAATTAAGAGTGGAGTTTTAACTCAATTATTAGAATCTGACTCGCAATTCCTCAACCCATTTATAAAATGAGAGTGAATTGAGGCATCAGAGTAATTTGCTGTTTGAGAGTTGAGAGCGGAGTTTTAACCCTTTTATAAAACTAGAGTGAATCGAGGCATCGGAGTAATTTGCTGTTTAAGGTAGACTGGGAATGGGAGTTGTGGAGAATTGTATAATAATATACCCATTCATCTCCTTTCGATGAATTTATGCGCTTTACGTGATACCAGCCACACTGTAATTGCGGTTGAGACATTCTTTATAGAATTAGCTATCTCTAGGATAGCTTACAAAACAGCTTATAGTTTATATGAAAACAATTATACTTTATTTTATCTTTTGTTATTGAAATAGCATATATATTTAAGCACAAATGTGATAAACGCATATGCTATAAGCACTTAATTAAGTTGTTTATCCAAACAAGGCCTTGTCTTTTTGGCTCGTTAGCTATGTGTGATGCAGCGCAACTGAAGTGTGGGACGGTTGAGAGTTGATAGTGGACTTTAACTCAATTGTTAGACTTTGACTCACATTTTCAATCAGAGTAGTTGCTGTTTAATGTGACTGGGAATGGGAGTCGAGGAGAATTGTCTAATAATATACTCATTGTATGATCAAAGAAGCCTTCGTATCCTTTTGAAGAAGTAATGAGCTTAATTTGATACCATACTATAATTGGTTTGGGAGCATCTGAATTTTGAACCTGGAATGAAAATTAGGAAAAGTTTTGGTTGAAATATTCTTTATAGAATTAGGCATCTCCTGTTATTGTCTGTATAATTTGATCTAGATGATATGATGATTATGATTGATTTTTTATCAGGTTCTATCGGTTGTTGGCCTTCTGCAAGACGAAGTTGATCCAATGGTCTCAGTCATGAAAGTCGAGAAGGCTCCTTTGGAATCTTATGCTGACATTGGTGGTTTAGATGCGCAGATTCAGGAAATTAAAGAGGCAGTTGAACTACCCCTTACACATCCTGAACTATATGAAGATATTGGCATCAAGCCACCTAAGGGGGTCATATTATATGGAGAACCTGGAACAGGAAAGACCTTGCTTGCAAAGGTTTGAACTTTTTCACTTTGCTTAACTTGTTCAATAATGAATCAATGCTGTGGAATTTATATTGTTTTTCTCTGTTTTACATGTACAAAATAAATTTTGTGTGATTATCAGATCTGTAGAGTTTGGAAATGACTTTGTCTGCAATTCTGCATTGTTTACAATGTTACTTTCTGGAGTTCTAGTTATTTGCTATTTGTCTGTTGCTTACAGGTACTGAAGGGAATTTTGTAAGAAAATGATTTTTTTCATTTTTGGATATTAAGATTAAGATGAAAATCTCTGTGTTTGGGGGGATTGGATTCCTTATGTACTGTTTTGGGGGTGGTTTTACTGCAGACACATTTAAAGATGATAAATACTGTATTGATACTGGTGACATATGTTGCAATGTCGTTTTCATCCTTTGCGAGTGTGCATGTTTTTAAAAAATTAGAATACAGTTTGCTCTTCTGTCTGTGGTTGTCAGACACCAAGTTGTATTAGTAAGAAGCAACTGATCTGAAGAAAAAGCAACCGAAAAACTGCTGCTTCTTTAAATAATTACTAAGTTCGTATATTATATTTTTTATTGCTTGTAATTTGTCACACCATCACATGCACTATCAGTTAGGTCTAATACATGCTCTTGTGCCTTCAGGCTGTGGCAAACTCAACATCAGCTACATTCTTGCGTGTAGTAGGTAGTGAATTGATACAAAAGTACTTGGGAGATGGTCCAAAACTTGTGAGGGAACTTTTCAGAGTTGCCGATGATCTTTCTCCTGCTATTGTTTTCATTGATGAAATTGATGCGGTCGGTACAAAGAGGTAAGCTGCTGAACCCACAATTTTAGGATTCATATAGGTGGGGGTGTAGAAGAGTGATGCATTGTATCACTTCATGGACTCTTTAAGGTTTTCTCCTTACATTCATGAGTTTAATTGTTAATATGCCTTACAGGTATGATGCTCACTCAGGTGGAGAACGTGAAATTCAAAGGACTATGTTAGAGTTGCTGAACCAGTTAGATGGTTTTGATTCAAGAGGAGATGTAAAAGTGATTCTGGCTACCAACAGAATTGAAAGTCTTGATCCAGCTTTGCTACGACCTGGTCGTATTGATAGGAAGATTGAATTTCCTCTTCCTGATATCAAAACAAGAAGACGTATTTTCCAGGTAAACATGATTAGTTTTGTGAATCCTAATGTTGTTTCTGTTGATTCCATGTGGTATCTTAAATATGCATATTCTGTTTGATCATGCAACTGAATGACTTTATGCTTGCTTTTAAATTAAGATACACACATCAAGGATGACACTAGCTGATGATGTCAACTTGGAAGAATTTGTTATGACGAAGGATGAATTCTCTGGAGCTGATATAAAGGCAATATGTACTGAAGCTGGCTTACTTGCTCTAAGGGAACGCCGAATGAAGGTTAAAAATTTATTCACGTTTCTATTGATAATGCTGTTTGTAACCTATTAACTTGCTAGTTTTGACAAGCTCGTTTTTTTAATATGACCCAAATATATTATGCTAAGGGCGAGTTGGGGTGGATTGGTTATGGTGATAATTTTTTTTATATACAGCATTTATATACAGCATTTATTGGGTTAGGGTTGTCTGTGGGTGTGGATATATACAGTTAGTCATTGTAAGCAACCTAAAAAATTTGCATGGCATCCTTATTGTCTTAATACTAAAAGAAAACAAAGCATTCTTACAGAAAGCAAAAACATCGTAGTTTTTCCACCTCTTCCCAGTTCCAACAACTACAACTTAGTTTTTATTGAAAGAAGTCTGTTTGTTTCATCTTTTAATATTAGGGTGGAGAATATGCAAGCAAAAGCAGCATACTCTAATTAAATCAATTCAGCAAATTATTTTAATTAATAAATAAATCGTGGAAAGTACTCCTTGGTGCCTCTTTAAAACACCAAGCCTGCTTTTGTTCTTTTGGATCATCATACTTTCCCGCGAGGGATGGCCCAACTGGGAAGATTCCAGTGTCAGAATAAAAAGTGCTTGTTTGATTCTACTGGGTAGTCCTATATTGACAGGATATCTGAGCCTGAGGCATGTCTTGACTTTAGAATGGGACAACATGCACTCCCACAAAACTTTTTCTAACTATAGTTACATTTTGTAGGTAACTTGAGTGTATATTTAGGTCCAATTTTTACTTCAGTGAATCAGTTCCCATCTTTACCTATCAATCTTATGTTTTTTTAAAGGATTTGTCTGTATTATCTTTTGGTTTGTACACTTCATTTTAAGTTTGATCCTCCAATTTATGATATCTTACTATTGCTTTTATATCTTGTTCAGGTGACTCATCCCGACTTTAAGAAGGCAAAGGATAAAGTGATGTTTAAGAAGAAAGAAGGAGTGCCAGAAGGACTATATATGTGA
Protein sequence

>MS.gene24037.t1

MGQGTPGGMNRQGHPGDRKQDGSDKKEKKFEPAAPPARVGRKQRKQKGPDAASRLPTVTPVSKCKLRLLKLERVKDYLLMEEEFVAYQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPAIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHPDFKKAKDKVMFKKKEGVPEGLYM