Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09870.t1 | XP_003625484.1 | 100 | 445 | 0 | 0 | 1 | 445 | 1 | 445 | 3.20E-228 | 800.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09870.t1 | Q9SZD4 | 90.6 | 445 | 40 | 2 | 1 | 445 | 1 | 443 | 1.8e-219 | 763.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09870.t1 | Q2HTA3 | 100.0 | 445 | 0 | 0 | 1 | 445 | 1 | 445 | 2.3e-228 | 800.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene09870 | 0.801605 | 8.32E-49 | -1.69E-46 |
| MS.gene049411 | MS.gene09870 | 0.800952 | 1.13E-48 | -1.69E-46 |
| MS.gene049887 | MS.gene09870 | 0.807361 | 5.25E-50 | -1.69E-46 |
| MS.gene050084 | MS.gene09870 | 0.866141 | 3.54E-65 | -1.69E-46 |
| MS.gene050085 | MS.gene09870 | 0.888444 | 5.87E-73 | -1.69E-46 |
| MS.gene050359 | MS.gene09870 | 0.818455 | 1.94E-52 | -1.69E-46 |
| MS.gene050384 | MS.gene09870 | 0.822559 | 2.22E-53 | -1.69E-46 |
| MS.gene050386 | MS.gene09870 | 0.830572 | 2.72E-55 | -1.69E-46 |
| MS.gene050437 | MS.gene09870 | 0.809123 | 2.21E-50 | -1.69E-46 |
| MS.gene050551 | MS.gene09870 | 0.811895 | 5.57E-51 | -1.69E-46 |
| MS.gene050646 | MS.gene09870 | 0.802751 | 4.83E-49 | -1.69E-46 |
| MS.gene050689 | MS.gene09870 | 0.86932 | 3.38E-66 | -1.69E-46 |
| MS.gene050752 | MS.gene09870 | 0.816357 | 5.76E-52 | -1.69E-46 |
| MS.gene050838 | MS.gene09870 | 0.866469 | 2.79E-65 | -1.69E-46 |
| MS.gene050931 | MS.gene09870 | 0.80326 | 3.80E-49 | -1.69E-46 |
| MS.gene051003 | MS.gene09870 | 0.874738 | 5.34E-68 | -1.69E-46 |
| MS.gene051102 | MS.gene09870 | 0.80059 | 1.34E-48 | -1.69E-46 |
| MS.gene051234 | MS.gene09870 | 0.863976 | 1.69E-64 | -1.69E-46 |
| MS.gene051343 | MS.gene09870 | 0.842837 | 2.03E-58 | -1.69E-46 |
| MS.gene051381 | MS.gene09870 | 0.875226 | 3.64E-68 | -1.69E-46 |
| MS.gene051382 | MS.gene09870 | 0.841426 | 4.79E-58 | -1.69E-46 |
| MS.gene051642 | MS.gene09870 | 0.845897 | 3.05E-59 | -1.69E-46 |
| MS.gene051850 | MS.gene09870 | 0.803731 | 3.03E-49 | -1.69E-46 |
| MS.gene052072 | MS.gene09870 | 0.827454 | 1.55E-54 | -1.69E-46 |
| MS.gene052307 | MS.gene09870 | 0.819313 | 1.24E-52 | -1.69E-46 |
| MS.gene052335 | MS.gene09870 | 0.819929 | 8.97E-53 | -1.69E-46 |
| MS.gene052342 | MS.gene09870 | 0.807765 | 4.31E-50 | -1.69E-46 |
| MS.gene052397 | MS.gene09870 | 0.825846 | 3.75E-54 | -1.69E-46 |
| MS.gene052609 | MS.gene09870 | 0.833011 | 6.81E-56 | -1.69E-46 |
| MS.gene053058 | MS.gene09870 | 0.831653 | 1.48E-55 | -1.69E-46 |
| MS.gene053143 | MS.gene09870 | 0.844871 | 5.78E-59 | -1.69E-46 |
| MS.gene05364 | MS.gene09870 | 0.800697 | 1.28E-48 | -1.69E-46 |
| MS.gene054004 | MS.gene09870 | 0.814684 | 1.36E-51 | -1.69E-46 |
| MS.gene054403 | MS.gene09870 | 0.80894 | 2.42E-50 | -1.69E-46 |
| MS.gene056097 | MS.gene09870 | 0.839815 | 1.26E-57 | -1.69E-46 |
| MS.gene056181 | MS.gene09870 | 0.837063 | 6.48E-57 | -1.69E-46 |
| MS.gene056787 | MS.gene09870 | 0.809758 | 1.62E-50 | -1.69E-46 |
| MS.gene057131 | MS.gene09870 | 0.827092 | 1.89E-54 | -1.69E-46 |
| MS.gene058054 | MS.gene09870 | 0.834708 | 2.56E-56 | -1.69E-46 |
| MS.gene058055 | MS.gene09870 | 0.825493 | 4.55E-54 | -1.69E-46 |
| MS.gene058292 | MS.gene09870 | 0.822639 | 2.13E-53 | -1.69E-46 |
| MS.gene058976 | MS.gene09870 | 0.831412 | 1.69E-55 | -1.69E-46 |
| MS.gene059007 | MS.gene09870 | 0.861593 | 9.20E-64 | -1.69E-46 |
| MS.gene059146 | MS.gene09870 | 0.835354 | 1.76E-56 | -1.69E-46 |
| MS.gene05978 | MS.gene09870 | 0.837643 | 4.60E-57 | -1.69E-46 |
| MS.gene060343 | MS.gene09870 | -0.803307 | 3.71E-49 | -1.69E-46 |
| MS.gene060563 | MS.gene09870 | 0.802254 | 6.12E-49 | -1.69E-46 |
| MS.gene061006 | MS.gene09870 | 0.843947 | 1.02E-58 | -1.69E-46 |
| MS.gene061100 | MS.gene09870 | 0.813608 | 2.35E-51 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09870.t1 | MTR_7g099640 | 100.000 | 445 | 0 | 0 | 1 | 445 | 1 | 445 | 0.0 | 896 |
| MS.gene09870.t1 | MTR_1g069105 | 96.644 | 447 | 12 | 2 | 1 | 445 | 1 | 446 | 0.0 | 862 |
| MS.gene09870.t1 | MTR_7g099640 | 98.588 | 425 | 6 | 0 | 1 | 425 | 1 | 425 | 0.0 | 840 |
| MS.gene09870.t1 | MTR_1g069105 | 95.733 | 375 | 13 | 2 | 1 | 373 | 1 | 374 | 0.0 | 717 |
| MS.gene09870.t1 | MTR_3g062510 | 50.416 | 361 | 175 | 2 | 67 | 426 | 41 | 398 | 1.94e-130 | 383 |
| MS.gene09870.t1 | MTR_4g094270 | 48.556 | 381 | 185 | 4 | 65 | 437 | 30 | 407 | 3.10e-115 | 344 |
| MS.gene09870.t1 | MTR_1g083330 | 45.669 | 381 | 185 | 2 | 77 | 436 | 37 | 416 | 5.51e-112 | 336 |
| MS.gene09870.t1 | MTR_4g033235 | 44.737 | 380 | 189 | 1 | 78 | 436 | 38 | 417 | 1.11e-111 | 335 |
| MS.gene09870.t1 | MTR_3g062510 | 52.288 | 306 | 141 | 3 | 67 | 370 | 40 | 342 | 1.28e-111 | 333 |
| MS.gene09870.t1 | MTR_3g117230 | 46.092 | 371 | 193 | 2 | 73 | 436 | 18 | 388 | 3.49e-107 | 323 |
| MS.gene09870.t1 | MTR_3g112260 | 45.251 | 358 | 196 | 0 | 79 | 436 | 28 | 385 | 3.71e-105 | 318 |
| MS.gene09870.t1 | MTR_1g095660 | 45.272 | 349 | 173 | 5 | 111 | 445 | 38 | 382 | 3.68e-101 | 307 |
| MS.gene09870.t1 | MTR_8g023550 | 43.109 | 341 | 171 | 4 | 111 | 445 | 85 | 408 | 1.64e-91 | 283 |
| MS.gene09870.t1 | MTR_7g101870 | 47.577 | 227 | 116 | 1 | 189 | 415 | 208 | 431 | 4.82e-61 | 213 |
| MS.gene09870.t1 | MTR_7g101870 | 41.026 | 234 | 138 | 0 | 181 | 414 | 473 | 706 | 3.62e-53 | 191 |
| MS.gene09870.t1 | MTR_1g063380 | 47.137 | 227 | 117 | 1 | 189 | 415 | 207 | 430 | 2.92e-60 | 210 |
| MS.gene09870.t1 | MTR_1g063380 | 41.453 | 234 | 137 | 0 | 181 | 414 | 472 | 705 | 4.05e-54 | 193 |
| MS.gene09870.t1 | MTR_7g010800 | 44.490 | 245 | 135 | 1 | 188 | 432 | 207 | 450 | 7.32e-59 | 204 |
| MS.gene09870.t1 | MTR_4g094662 | 40.816 | 245 | 144 | 1 | 188 | 432 | 230 | 473 | 4.80e-56 | 197 |
| MS.gene09870.t1 | MTR_2g438140 | 41.224 | 245 | 143 | 1 | 188 | 432 | 227 | 470 | 2.36e-55 | 195 |
| MS.gene09870.t1 | MTR_2g438140 | 41.224 | 245 | 143 | 1 | 188 | 432 | 287 | 530 | 4.55e-55 | 194 |
| MS.gene09870.t1 | MTR_7g088850 | 39.095 | 243 | 148 | 0 | 172 | 414 | 267 | 509 | 9.65e-55 | 191 |
| MS.gene09870.t1 | MTR_7g088850 | 26.860 | 242 | 163 | 4 | 210 | 439 | 36 | 275 | 5.83e-19 | 89.7 |
| MS.gene09870.t1 | MTR_2g095320 | 45.815 | 227 | 116 | 3 | 189 | 415 | 155 | 374 | 2.10e-54 | 193 |
| MS.gene09870.t1 | MTR_2g095320 | 38.261 | 230 | 129 | 2 | 185 | 414 | 419 | 635 | 4.28e-42 | 159 |
| MS.gene09870.t1 | MTR_7g078570 | 37.377 | 305 | 177 | 5 | 141 | 432 | 136 | 439 | 2.22e-54 | 192 |
| MS.gene09870.t1 | MTR_4g064350 | 43.320 | 247 | 136 | 3 | 189 | 432 | 322 | 567 | 2.74e-54 | 194 |
| MS.gene09870.t1 | MTR_8g099605 | 39.841 | 251 | 142 | 2 | 189 | 431 | 165 | 414 | 2.52e-53 | 189 |
| MS.gene09870.t1 | MTR_2g095210 | 41.453 | 234 | 137 | 0 | 181 | 414 | 400 | 633 | 3.19e-53 | 190 |
| MS.gene09870.t1 | MTR_2g095210 | 51.899 | 79 | 38 | 0 | 189 | 267 | 209 | 287 | 5.91e-20 | 93.2 |
| MS.gene09870.t1 | MTR_8g099605 | 39.841 | 251 | 142 | 2 | 189 | 431 | 406 | 655 | 1.12e-52 | 190 |
| MS.gene09870.t1 | MTR_7g096060 | 42.972 | 249 | 134 | 4 | 189 | 432 | 242 | 487 | 1.77e-52 | 187 |
| MS.gene09870.t1 | MTR_6g059690 | 39.576 | 283 | 165 | 4 | 155 | 432 | 163 | 444 | 5.80e-52 | 186 |
| MS.gene09870.t1 | MTR_5g069780 | 42.520 | 254 | 138 | 4 | 182 | 430 | 308 | 558 | 2.32e-51 | 185 |
| MS.gene09870.t1 | MTR_3g115110 | 39.592 | 245 | 147 | 1 | 188 | 432 | 250 | 493 | 3.33e-51 | 184 |
| MS.gene09870.t1 | MTR_0376s0020 | 41.463 | 246 | 141 | 2 | 189 | 432 | 3 | 247 | 9.64e-51 | 180 |
| MS.gene09870.t1 | MTR_7g088980 | 38.168 | 262 | 160 | 1 | 172 | 431 | 121 | 382 | 2.10e-50 | 176 |
| MS.gene09870.t1 | MTR_3g462930 | 42.063 | 252 | 142 | 3 | 182 | 430 | 299 | 549 | 2.17e-50 | 182 |
| MS.gene09870.t1 | MTR_7g088980 | 38.168 | 262 | 160 | 1 | 172 | 431 | 203 | 464 | 9.74e-50 | 176 |
| MS.gene09870.t1 | MTR_7g088980 | 30.137 | 146 | 96 | 3 | 266 | 407 | 28 | 171 | 1.05e-11 | 67.0 |
| MS.gene09870.t1 | MTR_7g088980 | 38.168 | 262 | 160 | 1 | 172 | 431 | 271 | 532 | 2.46e-49 | 176 |
| MS.gene09870.t1 | MTR_7g088980 | 30.000 | 220 | 148 | 3 | 192 | 407 | 22 | 239 | 2.89e-24 | 105 |
| MS.gene09870.t1 | MTR_7g088980 | 38.168 | 262 | 160 | 1 | 172 | 431 | 297 | 558 | 5.38e-49 | 176 |
| MS.gene09870.t1 | MTR_7g088980 | 29.949 | 197 | 132 | 3 | 215 | 407 | 71 | 265 | 1.92e-20 | 94.4 |
| MS.gene09870.t1 | MTR_2g101290 | 40.079 | 252 | 147 | 2 | 189 | 437 | 417 | 667 | 1.28e-48 | 177 |
| MS.gene09870.t1 | MTR_3g104470 | 37.943 | 282 | 164 | 3 | 152 | 433 | 196 | 466 | 3.86e-48 | 176 |
| MS.gene09870.t1 | MTR_2g101290 | 40.079 | 252 | 147 | 2 | 189 | 437 | 417 | 667 | 5.05e-48 | 176 |
| MS.gene09870.t1 | MTR_2g078630 | 38.723 | 235 | 133 | 4 | 186 | 413 | 65 | 295 | 1.15e-47 | 176 |
| MS.gene09870.t1 | MTR_2g078630 | 38.723 | 235 | 133 | 4 | 186 | 413 | 593 | 823 | 1.57e-47 | 176 |
| MS.gene09870.t1 | MTR_7g088830 | 40.562 | 249 | 145 | 2 | 185 | 431 | 656 | 903 | 2.07e-47 | 175 |
| MS.gene09870.t1 | MTR_7g088830 | 35.047 | 214 | 123 | 5 | 226 | 428 | 432 | 640 | 2.15e-28 | 119 |
| MS.gene09870.t1 | MTR_4g067100 | 40.164 | 244 | 137 | 3 | 188 | 425 | 381 | 621 | 1.11e-46 | 173 |
| MS.gene09870.t1 | MTR_4g067100 | 40.164 | 244 | 137 | 3 | 188 | 425 | 381 | 621 | 1.19e-46 | 173 |
| MS.gene09870.t1 | MTR_6g016600 | 40.891 | 247 | 140 | 3 | 189 | 433 | 319 | 561 | 1.27e-46 | 170 |
| MS.gene09870.t1 | MTR_7g089040 | 40.637 | 251 | 146 | 2 | 183 | 431 | 681 | 930 | 8.99e-46 | 170 |
| MS.gene09870.t1 | MTR_7g089040 | 32.218 | 239 | 153 | 4 | 186 | 420 | 385 | 618 | 1.86e-29 | 122 |
| MS.gene09870.t1 | MTR_1g028390 | 37.600 | 250 | 147 | 3 | 186 | 433 | 328 | 570 | 1.39e-45 | 169 |
| MS.gene09870.t1 | MTR_3g104480 | 36.140 | 285 | 171 | 3 | 149 | 433 | 191 | 464 | 1.72e-44 | 165 |
| MS.gene09870.t1 | MTR_5g075340 | 39.184 | 245 | 145 | 2 | 189 | 433 | 231 | 471 | 4.48e-43 | 162 |
| MS.gene09870.t1 | MTR_7g089290 | 39.676 | 247 | 140 | 7 | 177 | 418 | 629 | 871 | 5.78e-43 | 162 |
| MS.gene09870.t1 | MTR_7g089290 | 39.676 | 247 | 140 | 7 | 177 | 418 | 657 | 899 | 6.48e-43 | 162 |
| MS.gene09870.t1 | MTR_2g007010 | 39.381 | 226 | 135 | 2 | 189 | 413 | 240 | 464 | 2.07e-42 | 160 |
| MS.gene09870.t1 | MTR_2g007010 | 38.627 | 233 | 138 | 3 | 185 | 415 | 526 | 755 | 1.07e-39 | 152 |
| MS.gene09870.t1 | MTR_4g011810 | 36.923 | 260 | 150 | 5 | 181 | 431 | 236 | 490 | 3.88e-42 | 156 |
| MS.gene09870.t1 | MTR_1g088730 | 38.961 | 231 | 132 | 5 | 188 | 414 | 933 | 1158 | 9.27e-41 | 155 |
| MS.gene09870.t1 | MTR_7g075520 | 36.626 | 243 | 145 | 5 | 175 | 414 | 200 | 436 | 1.49e-40 | 151 |
| MS.gene09870.t1 | MTR_1g101870 | 38.261 | 230 | 134 | 5 | 188 | 414 | 558 | 782 | 4.82e-40 | 153 |
| MS.gene09870.t1 | MTR_1g101870 | 38.261 | 230 | 134 | 5 | 188 | 414 | 506 | 730 | 5.13e-40 | 153 |
| MS.gene09870.t1 | MTR_5g009840 | 36.522 | 230 | 138 | 4 | 188 | 414 | 517 | 741 | 1.11e-39 | 152 |
| MS.gene09870.t1 | MTR_4g053350 | 35.662 | 272 | 143 | 11 | 181 | 445 | 121 | 367 | 1.31e-39 | 147 |
| MS.gene09870.t1 | MTR_4g053350 | 35.662 | 272 | 143 | 11 | 181 | 445 | 121 | 367 | 1.40e-39 | 147 |
| MS.gene09870.t1 | MTR_3g096000 | 39.149 | 235 | 132 | 5 | 188 | 414 | 297 | 528 | 1.54e-39 | 152 |
| MS.gene09870.t1 | MTR_1g099470 | 37.391 | 230 | 135 | 5 | 188 | 414 | 435 | 658 | 2.78e-39 | 150 |
| MS.gene09870.t1 | MTR_1g088750 | 37.662 | 231 | 135 | 5 | 188 | 414 | 890 | 1115 | 3.13e-39 | 151 |
| MS.gene09870.t1 | MTR_1g088750 | 37.662 | 231 | 135 | 5 | 188 | 414 | 939 | 1164 | 3.30e-39 | 151 |
| MS.gene09870.t1 | MTR_8g099065 | 35.217 | 230 | 141 | 4 | 188 | 414 | 535 | 759 | 3.38e-39 | 150 |
| MS.gene09870.t1 | MTR_2g086160 | 34.328 | 268 | 152 | 9 | 181 | 445 | 126 | 372 | 4.36e-39 | 146 |
| MS.gene09870.t1 | MTR_2g086160 | 37.004 | 227 | 133 | 7 | 181 | 404 | 126 | 345 | 9.86e-39 | 143 |
| MS.gene09870.t1 | MTR_3g089100 | 37.333 | 225 | 132 | 5 | 188 | 408 | 903 | 1122 | 4.66e-38 | 147 |
| MS.gene09870.t1 | MTR_3g089100 | 37.333 | 225 | 132 | 5 | 188 | 408 | 932 | 1151 | 4.88e-38 | 147 |
| MS.gene09870.t1 | MTR_3g089100 | 37.333 | 225 | 132 | 5 | 188 | 408 | 898 | 1117 | 5.01e-38 | 147 |
| MS.gene09870.t1 | MTR_4g096870 | 36.170 | 235 | 143 | 5 | 181 | 413 | 113 | 342 | 1.28e-37 | 141 |
| MS.gene09870.t1 | MTR_3g023900 | 34.831 | 267 | 158 | 6 | 181 | 435 | 230 | 492 | 1.66e-37 | 145 |
| MS.gene09870.t1 | MTR_3g023900 | 33.969 | 262 | 152 | 3 | 172 | 415 | 516 | 774 | 8.70e-34 | 135 |
| MS.gene09870.t1 | MTR_6g033740 | 36.522 | 230 | 137 | 5 | 188 | 414 | 501 | 724 | 4.93e-37 | 144 |
| MS.gene09870.t1 | MTR_1g099480 | 36.522 | 230 | 138 | 5 | 188 | 414 | 469 | 693 | 5.29e-37 | 144 |
| MS.gene09870.t1 | MTR_3g092070 | 36.957 | 230 | 135 | 5 | 189 | 414 | 83 | 306 | 2.71e-36 | 137 |
| MS.gene09870.t1 | MTR_3g092070 | 36.957 | 230 | 135 | 5 | 189 | 414 | 83 | 306 | 3.36e-36 | 136 |
| MS.gene09870.t1 | MTR_6g023875 | 36.992 | 246 | 141 | 8 | 176 | 415 | 371 | 608 | 7.89e-35 | 137 |
| MS.gene09870.t1 | MTR_3g023890 | 38.306 | 248 | 126 | 5 | 189 | 414 | 387 | 629 | 1.34e-34 | 137 |
| MS.gene09870.t1 | MTR_3g023890 | 35.111 | 225 | 128 | 6 | 199 | 413 | 106 | 322 | 1.29e-29 | 122 |
| MS.gene09870.t1 | MTR_5g075360 | 33.969 | 262 | 166 | 3 | 175 | 433 | 1 | 258 | 9.88e-34 | 132 |
| MS.gene09870.t1 | MTR_5g075360 | 33.700 | 273 | 172 | 4 | 166 | 433 | 166 | 434 | 1.51e-33 | 133 |
| MS.gene09870.t1 | MTR_4g088885 | 33.569 | 283 | 159 | 7 | 177 | 432 | 213 | 493 | 2.99e-33 | 133 |
| MS.gene09870.t1 | MTR_5g075360 | 34.979 | 243 | 154 | 2 | 190 | 432 | 69 | 307 | 6.08e-33 | 130 |
| MS.gene09870.t1 | MTR_3g092080 | 35.931 | 231 | 136 | 6 | 189 | 414 | 86 | 309 | 6.17e-33 | 128 |
| MS.gene09870.t1 | MTR_3g104490 | 35.772 | 246 | 128 | 4 | 189 | 432 | 209 | 426 | 8.10e-33 | 131 |
| MS.gene09870.t1 | MTR_3g092080 | 35.931 | 231 | 136 | 6 | 189 | 414 | 86 | 309 | 8.11e-33 | 128 |
| MS.gene09870.t1 | MTR_5g075360 | 34.979 | 243 | 154 | 2 | 190 | 432 | 245 | 483 | 1.04e-32 | 131 |
| MS.gene09870.t1 | MTR_1g044600 | 31.597 | 288 | 140 | 6 | 155 | 432 | 135 | 375 | 1.14e-32 | 129 |
| MS.gene09870.t1 | MTR_6g023855 | 35.918 | 245 | 130 | 9 | 183 | 414 | 242 | 472 | 2.11e-32 | 129 |
| MS.gene09870.t1 | MTR_8g056860 | 32.245 | 245 | 152 | 3 | 195 | 430 | 477 | 716 | 6.69e-32 | 129 |
| MS.gene09870.t1 | MTR_5g074850 | 35.317 | 252 | 145 | 6 | 190 | 430 | 501 | 745 | 9.92e-32 | 129 |
| MS.gene09870.t1 | MTR_4g112600 | 71.795 | 78 | 21 | 1 | 191 | 267 | 4 | 81 | 1.46e-31 | 116 |
| MS.gene09870.t1 | MTR_2g024440 | 35.498 | 231 | 128 | 7 | 188 | 407 | 215 | 435 | 1.10e-30 | 124 |
| MS.gene09870.t1 | MTR_8g469460 | 34.553 | 246 | 123 | 4 | 189 | 432 | 209 | 418 | 1.39e-30 | 125 |
| MS.gene09870.t1 | MTR_2g024440 | 35.498 | 231 | 128 | 7 | 188 | 407 | 298 | 518 | 1.90e-30 | 124 |
| MS.gene09870.t1 | MTR_2g024440 | 35.498 | 231 | 128 | 7 | 188 | 407 | 297 | 517 | 2.04e-30 | 124 |
| MS.gene09870.t1 | MTR_7g088980 | 30.916 | 262 | 136 | 2 | 172 | 431 | 271 | 489 | 3.84e-30 | 122 |
| MS.gene09870.t1 | MTR_7g088980 | 30.000 | 220 | 148 | 3 | 192 | 407 | 22 | 239 | 2.19e-24 | 105 |
| MS.gene09870.t1 | MTR_7g088980 | 30.916 | 262 | 136 | 2 | 172 | 431 | 297 | 515 | 5.04e-30 | 122 |
| MS.gene09870.t1 | MTR_7g088980 | 29.949 | 197 | 132 | 3 | 215 | 407 | 71 | 265 | 1.45e-20 | 94.7 |
| MS.gene09870.t1 | MTR_1g099480 | 39.766 | 171 | 96 | 4 | 188 | 355 | 469 | 635 | 4.12e-29 | 120 |
| MS.gene09870.t1 | MTR_8g099065 | 38.012 | 171 | 98 | 4 | 188 | 355 | 535 | 700 | 1.46e-28 | 119 |
| MS.gene09870.t1 | MTR_4g074920 | 33.043 | 230 | 127 | 6 | 189 | 414 | 671 | 877 | 2.54e-28 | 119 |
| MS.gene09870.t1 | MTR_6g023865 | 31.783 | 258 | 140 | 8 | 181 | 414 | 152 | 397 | 3.39e-27 | 114 |
| MS.gene09870.t1 | MTR_1g080430 | 31.527 | 203 | 134 | 3 | 172 | 370 | 659 | 860 | 1.74e-22 | 101 |
| MS.gene09870.t1 | MTR_1g080430 | 30.041 | 243 | 153 | 6 | 172 | 410 | 659 | 888 | 1.75e-22 | 101 |
| MS.gene09870.t1 | MTR_4g083460 | 28.279 | 244 | 116 | 6 | 189 | 414 | 839 | 1041 | 1.84e-15 | 79.3 |
| MS.gene09870.t1 | MTR_8g076920 | 35.260 | 173 | 98 | 6 | 191 | 357 | 225 | 389 | 2.86e-14 | 75.1 |
| MS.gene09870.t1 | MTR_5g020980 | 34.783 | 161 | 92 | 5 | 202 | 357 | 229 | 381 | 7.82e-14 | 73.9 |
| MS.gene09870.t1 | MTR_5g020530 | 35.664 | 143 | 78 | 5 | 223 | 361 | 387 | 519 | 8.70e-14 | 73.9 |
| MS.gene09870.t1 | MTR_2g030420 | 32.934 | 167 | 83 | 7 | 214 | 359 | 226 | 384 | 5.86e-12 | 67.8 |
| MS.gene09870.t1 | MTR_6g042290 | 33.974 | 156 | 83 | 6 | 214 | 357 | 236 | 383 | 8.06e-12 | 67.4 |
| MS.gene09870.t1 | MTR_6g009510 | 26.117 | 291 | 180 | 11 | 76 | 357 | 74 | 338 | 1.90e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09870.t1 | AT4G29040 | 95.730 | 445 | 17 | 2 | 1 | 445 | 1 | 443 | 0.0 | 854 |
| MS.gene09870.t1 | AT2G20140 | 95.506 | 445 | 18 | 2 | 1 | 445 | 1 | 443 | 0.0 | 852 |
| MS.gene09870.t1 | AT5G58290 | 51.381 | 362 | 172 | 2 | 66 | 426 | 33 | 391 | 6.21e-133 | 389 |
| MS.gene09870.t1 | AT5G20000 | 52.000 | 325 | 155 | 1 | 114 | 437 | 85 | 409 | 2.41e-112 | 337 |
| MS.gene09870.t1 | AT5G19990 | 51.692 | 325 | 156 | 1 | 114 | 437 | 85 | 409 | 3.76e-112 | 337 |
| MS.gene09870.t1 | AT5G19990 | 51.692 | 325 | 156 | 1 | 114 | 437 | 85 | 409 | 3.76e-112 | 337 |
| MS.gene09870.t1 | AT5G19990 | 51.692 | 325 | 156 | 1 | 114 | 437 | 27 | 351 | 4.78e-112 | 334 |
| MS.gene09870.t1 | AT1G09100 | 45.526 | 380 | 186 | 2 | 78 | 436 | 37 | 416 | 1.62e-110 | 332 |
| MS.gene09870.t1 | AT3G05530 | 46.006 | 363 | 175 | 1 | 95 | 436 | 55 | 417 | 1.89e-110 | 332 |
| MS.gene09870.t1 | AT1G45000 | 46.361 | 371 | 192 | 3 | 73 | 436 | 15 | 385 | 8.46e-106 | 320 |
| MS.gene09870.t1 | AT5G43010 | 46.429 | 364 | 191 | 2 | 77 | 436 | 22 | 385 | 3.65e-105 | 318 |
| MS.gene09870.t1 | AT1G53750 | 46.199 | 342 | 176 | 3 | 110 | 445 | 84 | 423 | 3.77e-104 | 316 |
| MS.gene09870.t1 | AT1G53780 | 46.199 | 342 | 174 | 4 | 111 | 445 | 256 | 594 | 5.72e-98 | 306 |
| MS.gene09870.t1 | AT1G53780 | 46.199 | 342 | 174 | 4 | 111 | 445 | 257 | 595 | 6.20e-98 | 306 |
| MS.gene09870.t1 | AT1G53780 | 46.199 | 342 | 174 | 4 | 111 | 445 | 257 | 595 | 6.20e-98 | 306 |
| MS.gene09870.t1 | AT1G53780 | 46.199 | 342 | 174 | 4 | 111 | 445 | 278 | 616 | 1.50e-97 | 305 |
| MS.gene09870.t1 | AT1G45000 | 44.867 | 263 | 138 | 3 | 73 | 328 | 15 | 277 | 2.12e-67 | 218 |
| MS.gene09870.t1 | AT3G53230 | 47.577 | 227 | 116 | 1 | 189 | 415 | 207 | 430 | 1.18e-60 | 211 |
| MS.gene09870.t1 | AT3G53230 | 40.323 | 248 | 148 | 0 | 181 | 428 | 472 | 719 | 3.06e-54 | 194 |
| MS.gene09870.t1 | AT5G03340 | 47.137 | 227 | 117 | 1 | 189 | 415 | 206 | 429 | 6.50e-60 | 209 |
| MS.gene09870.t1 | AT5G03340 | 41.453 | 234 | 137 | 0 | 181 | 414 | 471 | 704 | 5.03e-53 | 190 |
| MS.gene09870.t1 | AT3G09840 | 47.577 | 227 | 116 | 2 | 189 | 415 | 206 | 429 | 7.12e-60 | 209 |
| MS.gene09870.t1 | AT3G09840 | 41.702 | 235 | 136 | 1 | 181 | 414 | 471 | 705 | 3.57e-51 | 185 |
| MS.gene09870.t1 | AT2G30950 | 41.633 | 245 | 142 | 1 | 188 | 432 | 225 | 468 | 9.26e-57 | 199 |
| MS.gene09870.t1 | AT2G30950 | 41.633 | 245 | 142 | 1 | 188 | 432 | 225 | 468 | 9.26e-57 | 199 |
| MS.gene09870.t1 | AT2G30950 | 41.633 | 245 | 142 | 1 | 188 | 432 | 225 | 468 | 9.26e-57 | 199 |
| MS.gene09870.t1 | AT2G30950 | 41.633 | 245 | 142 | 1 | 188 | 432 | 229 | 472 | 9.28e-57 | 199 |
| MS.gene09870.t1 | AT1G07510 | 44.130 | 247 | 134 | 3 | 189 | 432 | 326 | 571 | 1.96e-55 | 197 |
| MS.gene09870.t1 | AT5G15250 | 43.673 | 245 | 137 | 1 | 188 | 432 | 222 | 465 | 4.12e-55 | 194 |
| MS.gene09870.t1 | AT1G06430 | 40.408 | 245 | 145 | 1 | 188 | 432 | 218 | 461 | 5.37e-55 | 194 |
| MS.gene09870.t1 | AT1G06430 | 40.408 | 245 | 145 | 1 | 188 | 432 | 218 | 461 | 5.37e-55 | 194 |
| MS.gene09870.t1 | AT1G06430 | 40.408 | 245 | 145 | 1 | 188 | 432 | 218 | 461 | 5.37e-55 | 194 |
| MS.gene09870.t1 | AT3G47060 | 44.355 | 248 | 130 | 4 | 188 | 430 | 323 | 567 | 5.24e-54 | 193 |
| MS.gene09870.t1 | AT5G58870 | 44.355 | 248 | 130 | 4 | 188 | 430 | 327 | 571 | 5.63e-54 | 193 |
| MS.gene09870.t1 | AT2G29080 | 44.309 | 246 | 134 | 2 | 189 | 432 | 321 | 565 | 1.47e-52 | 189 |
| MS.gene09870.t1 | AT5G15250 | 39.925 | 268 | 137 | 2 | 188 | 432 | 222 | 488 | 7.51e-52 | 182 |
| MS.gene09870.t1 | AT1G50250 | 39.592 | 245 | 147 | 1 | 188 | 432 | 260 | 503 | 1.62e-51 | 185 |
| MS.gene09870.t1 | AT4G23940 | 39.442 | 251 | 143 | 2 | 189 | 431 | 429 | 678 | 3.47e-51 | 186 |
| MS.gene09870.t1 | AT5G42270 | 38.776 | 245 | 149 | 1 | 188 | 432 | 248 | 491 | 2.65e-50 | 181 |
| MS.gene09870.t1 | AT3G15120 | 39.914 | 233 | 131 | 3 | 186 | 412 | 725 | 954 | 9.10e-50 | 182 |
| MS.gene09870.t1 | AT3G15120 | 39.914 | 233 | 131 | 3 | 186 | 412 | 715 | 944 | 9.71e-50 | 182 |
| MS.gene09870.t1 | AT1G05910 | 40.726 | 248 | 138 | 3 | 188 | 429 | 379 | 623 | 4.37e-49 | 180 |
| MS.gene09870.t1 | AT2G03670 | 38.400 | 250 | 151 | 2 | 185 | 431 | 281 | 530 | 4.80e-48 | 174 |
| MS.gene09870.t1 | AT2G03670 | 32.661 | 248 | 160 | 3 | 190 | 431 | 22 | 268 | 3.08e-35 | 138 |
| MS.gene09870.t1 | AT2G26140 | 40.408 | 245 | 142 | 2 | 189 | 433 | 226 | 466 | 1.02e-47 | 174 |
| MS.gene09870.t1 | AT3G56690 | 40.435 | 230 | 136 | 1 | 185 | 414 | 719 | 947 | 2.26e-47 | 175 |
| MS.gene09870.t1 | AT3G56690 | 41.837 | 196 | 110 | 2 | 219 | 413 | 413 | 605 | 7.20e-42 | 159 |
| MS.gene09870.t1 | AT3G16290 | 39.749 | 239 | 143 | 1 | 189 | 427 | 409 | 646 | 1.34e-46 | 172 |
| MS.gene09870.t1 | AT5G53170 | 37.200 | 250 | 148 | 3 | 186 | 433 | 358 | 600 | 3.19e-45 | 168 |
| MS.gene09870.t1 | AT3G02450 | 40.377 | 265 | 150 | 4 | 183 | 443 | 327 | 587 | 5.02e-45 | 166 |
| MS.gene09870.t1 | AT2G45500 | 35.743 | 249 | 149 | 6 | 170 | 414 | 63 | 304 | 1.39e-43 | 156 |
| MS.gene09870.t1 | AT2G45500 | 35.743 | 249 | 149 | 6 | 170 | 414 | 63 | 304 | 1.39e-43 | 156 |
| MS.gene09870.t1 | AT2G45500 | 35.178 | 253 | 153 | 6 | 166 | 414 | 196 | 441 | 2.23e-42 | 156 |
| MS.gene09870.t1 | AT2G45500 | 35.178 | 253 | 153 | 6 | 166 | 414 | 192 | 437 | 2.66e-42 | 156 |
| MS.gene09870.t1 | AT2G45500 | 35.178 | 253 | 153 | 6 | 166 | 414 | 202 | 447 | 3.56e-42 | 156 |
| MS.gene09870.t1 | AT1G03000 | 37.743 | 257 | 153 | 6 | 177 | 429 | 645 | 898 | 3.84e-42 | 159 |
| MS.gene09870.t1 | AT1G80350 | 36.154 | 260 | 152 | 5 | 181 | 431 | 230 | 484 | 1.18e-41 | 155 |
| MS.gene09870.t1 | AT1G02890 | 38.528 | 231 | 133 | 5 | 188 | 414 | 942 | 1167 | 1.61e-41 | 158 |
| MS.gene09870.t1 | AT4G02480 | 38.528 | 231 | 133 | 5 | 188 | 414 | 961 | 1186 | 1.81e-41 | 158 |
| MS.gene09870.t1 | AT5G08470 | 37.168 | 226 | 139 | 1 | 189 | 414 | 843 | 1065 | 2.07e-40 | 155 |
| MS.gene09870.t1 | AT4G28000 | 37.826 | 230 | 134 | 6 | 188 | 414 | 518 | 741 | 2.24e-40 | 154 |
| MS.gene09870.t1 | AT4G28000 | 37.826 | 230 | 134 | 6 | 188 | 414 | 518 | 741 | 2.44e-40 | 154 |
| MS.gene09870.t1 | AT5G08470 | 37.168 | 226 | 139 | 1 | 189 | 414 | 834 | 1056 | 2.49e-40 | 154 |
| MS.gene09870.t1 | AT4G28000 | 37.826 | 230 | 134 | 6 | 188 | 414 | 516 | 739 | 2.54e-40 | 154 |
| MS.gene09870.t1 | AT5G53540 | 37.391 | 230 | 134 | 5 | 189 | 414 | 86 | 309 | 1.07e-39 | 147 |
| MS.gene09870.t1 | AT2G34560 | 36.726 | 226 | 139 | 3 | 189 | 413 | 102 | 324 | 3.54e-39 | 145 |
| MS.gene09870.t1 | AT2G34560 | 36.726 | 226 | 139 | 3 | 189 | 413 | 111 | 333 | 4.97e-39 | 145 |
| MS.gene09870.t1 | AT3G01610 | 35.366 | 246 | 144 | 3 | 179 | 413 | 222 | 463 | 1.90e-38 | 149 |
| MS.gene09870.t1 | AT3G01610 | 36.123 | 227 | 140 | 3 | 189 | 414 | 527 | 749 | 3.01e-33 | 133 |
| MS.gene09870.t1 | AT3G01610 | 35.366 | 246 | 144 | 3 | 179 | 413 | 222 | 463 | 1.90e-38 | 149 |
| MS.gene09870.t1 | AT3G01610 | 36.123 | 227 | 140 | 3 | 189 | 414 | 527 | 749 | 3.13e-33 | 133 |
| MS.gene09870.t1 | AT1G64110 | 35.652 | 230 | 140 | 5 | 188 | 414 | 514 | 738 | 2.12e-38 | 148 |
| MS.gene09870.t1 | AT1G64110 | 35.652 | 230 | 140 | 5 | 188 | 414 | 519 | 743 | 2.12e-38 | 148 |
| MS.gene09870.t1 | AT1G64110 | 35.652 | 230 | 140 | 5 | 188 | 414 | 519 | 743 | 2.12e-38 | 148 |
| MS.gene09870.t1 | AT1G64110 | 35.652 | 230 | 140 | 5 | 188 | 414 | 517 | 741 | 2.14e-38 | 148 |
| MS.gene09870.t1 | AT1G64110 | 35.652 | 230 | 140 | 5 | 188 | 414 | 517 | 741 | 2.14e-38 | 148 |
| MS.gene09870.t1 | AT5G52882 | 36.957 | 230 | 136 | 6 | 188 | 414 | 515 | 738 | 4.65e-38 | 147 |
| MS.gene09870.t1 | AT5G64580 | 37.872 | 235 | 135 | 6 | 188 | 414 | 314 | 545 | 5.81e-38 | 147 |
| MS.gene09870.t1 | AT4G27680 | 36.797 | 231 | 134 | 6 | 189 | 414 | 83 | 306 | 4.51e-37 | 140 |
| MS.gene09870.t1 | AT2G27600 | 35.055 | 271 | 146 | 11 | 181 | 445 | 123 | 369 | 4.96e-37 | 140 |
| MS.gene09870.t1 | AT1G50140 | 37.500 | 232 | 132 | 6 | 189 | 414 | 691 | 915 | 5.15e-37 | 144 |
| MS.gene09870.t1 | AT1G50140 | 37.500 | 232 | 132 | 6 | 189 | 414 | 691 | 915 | 5.15e-37 | 144 |
| MS.gene09870.t1 | AT1G50140 | 37.500 | 232 | 132 | 6 | 189 | 414 | 713 | 937 | 6.17e-37 | 144 |
| MS.gene09870.t1 | AT1G50140 | 37.500 | 232 | 132 | 6 | 189 | 414 | 713 | 937 | 6.17e-37 | 144 |
| MS.gene09870.t1 | AT1G50140 | 37.500 | 232 | 132 | 6 | 189 | 414 | 713 | 937 | 6.17e-37 | 144 |
| MS.gene09870.t1 | AT2G03670 | 32.661 | 248 | 160 | 3 | 190 | 431 | 22 | 268 | 3.45e-36 | 138 |
| MS.gene09870.t1 | AT2G03670 | 38.732 | 142 | 86 | 1 | 185 | 325 | 281 | 422 | 1.61e-22 | 99.8 |
| MS.gene09870.t1 | AT4G24860 | 35.498 | 231 | 140 | 5 | 188 | 414 | 816 | 1041 | 7.88e-36 | 141 |
| MS.gene09870.t1 | AT4G24860 | 35.498 | 231 | 140 | 5 | 188 | 414 | 818 | 1043 | 8.65e-36 | 141 |
| MS.gene09870.t1 | AT4G24860 | 35.498 | 231 | 140 | 5 | 188 | 414 | 791 | 1016 | 8.88e-36 | 141 |
| MS.gene09870.t1 | AT4G24860 | 35.498 | 231 | 140 | 5 | 188 | 414 | 814 | 1039 | 1.06e-35 | 140 |
| MS.gene09870.t1 | AT3G19740 | 35.115 | 262 | 146 | 7 | 189 | 431 | 703 | 959 | 1.65e-35 | 140 |
| MS.gene09870.t1 | AT3G27120 | 35.510 | 245 | 144 | 8 | 176 | 414 | 389 | 625 | 6.17e-34 | 135 |
| MS.gene09870.t1 | AT1G79560 | 32.245 | 245 | 152 | 3 | 195 | 430 | 497 | 736 | 5.89e-32 | 129 |
| MS.gene09870.t1 | AT1G79560 | 32.245 | 245 | 152 | 3 | 195 | 430 | 497 | 736 | 6.13e-32 | 129 |
| MS.gene09870.t1 | AT1G79560 | 32.245 | 245 | 152 | 3 | 195 | 430 | 497 | 736 | 6.28e-32 | 129 |
| MS.gene09870.t1 | AT4G04180 | 35.371 | 229 | 131 | 6 | 188 | 407 | 317 | 537 | 1.03e-31 | 128 |
| MS.gene09870.t1 | AT4G04180 | 35.371 | 229 | 131 | 6 | 188 | 407 | 312 | 532 | 1.08e-31 | 128 |
| MS.gene09870.t1 | AT4G04910 | 33.094 | 278 | 157 | 8 | 177 | 427 | 203 | 478 | 4.16e-31 | 127 |
| MS.gene09870.t1 | AT1G62130 | 32.589 | 224 | 132 | 6 | 188 | 408 | 744 | 951 | 5.60e-28 | 117 |
| MS.gene09870.t1 | AT1G62130 | 32.589 | 224 | 132 | 6 | 188 | 408 | 751 | 958 | 6.11e-28 | 117 |
| MS.gene09870.t1 | AT1G02890 | 33.766 | 231 | 116 | 6 | 188 | 414 | 942 | 1139 | 1.94e-26 | 113 |
| MS.gene09870.t1 | AT3G04340 | 33.690 | 187 | 119 | 3 | 185 | 370 | 782 | 964 | 7.77e-23 | 102 |
| MS.gene09870.t1 | AT5G08470 | 35.135 | 148 | 93 | 1 | 189 | 336 | 843 | 987 | 7.67e-20 | 93.2 |
| MS.gene09870.t1 | AT2G18193 | 35.185 | 162 | 92 | 6 | 200 | 356 | 219 | 372 | 5.12e-13 | 71.2 |
| MS.gene09870.t1 | AT4G36580 | 34.694 | 147 | 74 | 6 | 223 | 361 | 381 | 513 | 4.69e-12 | 68.6 |
| MS.gene09870.t1 | AT2G18330 | 30.939 | 181 | 103 | 6 | 185 | 361 | 354 | 516 | 9.12e-12 | 67.8 |
| MS.gene09870.t1 | AT2G18190 | 33.333 | 165 | 94 | 5 | 200 | 356 | 220 | 376 | 2.16e-11 | 66.2 |
| MS.gene09870.t1 | AT3G28580 | 29.586 | 169 | 86 | 4 | 214 | 357 | 230 | 390 | 9.06e-11 | 64.3 |
| MS.gene09870.t1 | AT5G17760 | 34.437 | 151 | 83 | 5 | 214 | 356 | 243 | 385 | 9.81e-11 | 64.3 |
Find 113 sgRNAs with CRISPR-Local
Find 341 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCTTTAATTTCCTGTATC+TGG | 0.101599 | 7.3:-12885531 | None:intergenic |
| CTTTGCAAGAAGTGTCTTTC+CGG | 0.232867 | 7.3:-12885644 | None:intergenic |
| TGTCGTTGCCGTCTGGTTTC+CGG | 0.236164 | 7.3:-12883964 | None:intergenic |
| AAAAGTTCCCTCACAAGTTT+TGG | 0.248853 | 7.3:-12886553 | None:intergenic |
| AATCAAGGACTATTTGTTAA+TGG | 0.271847 | 7.3:+12884132 | MS.gene09870:CDS |
| CAAACTTCGGTTACTGAAAC+TGG | 0.308708 | 7.3:+12884105 | MS.gene09870:CDS |
| ACCAGACGGCAACGACAAAA+AGG | 0.312803 | 7.3:+12883970 | MS.gene09870:CDS |
| TACCAGGTTCTTTCTGTTGT+TGG | 0.324071 | 7.3:+12885415 | MS.gene09870:intron |
| AGAAGTGTCTTTCCGGTTCC+AGG | 0.334762 | 7.3:-12885637 | None:intergenic |
| GAAGGTTGAGAAGGCTCCTT+TGG | 0.355174 | 7.3:+12885477 | MS.gene09870:CDS |
| CCTGAACTGTATGAAGATAT+TGG | 0.355232 | 7.3:+12885577 | MS.gene09870:CDS |
| TTCTTTAATTTCCTGTATCT+GGG | 0.365835 | 7.3:-12885530 | None:intergenic |
| AGAAGAGTTTGTAGCGAATC+AGG | 0.373755 | 7.3:+12884156 | MS.gene09870:CDS |
| CCATATAAAATGACTCCCTT+TGG | 0.375158 | 7.3:-12885610 | None:intergenic |
| CACCAGGAGGCGGTTTGAAC+CGG | 0.381250 | 7.3:+12883930 | MS.gene09870:CDS |
| GTTATGTTTAAGAAGAAAGA+AGG | 0.390674 | 7.3:+12888901 | MS.gene09870:CDS |
| TAGAATCAAAACCATCTAAC+TGG | 0.394542 | 7.3:-12886860 | None:intergenic |
| CCATGCTATTGTTTCAAGTT+CGG | 0.398918 | 7.3:+12884288 | MS.gene09870:CDS |
| TCAAGATTGCCAACACTCAT+AGG | 0.399371 | 7.3:-12884247 | None:intergenic |
| GTTTCCGGTCACCCGGTTGC+CGG | 0.402127 | 7.3:-12883949 | None:intergenic |
| AGCTGAAGAAGATAGATCTA+AGG | 0.403467 | 7.3:+12884204 | MS.gene09870:CDS |
| AGAAGAATTTGTCATGACTA+AGG | 0.410103 | 7.3:+12887160 | MS.gene09870:CDS |
| CCAATATCTTCATACAGTTC+AGG | 0.412254 | 7.3:-12885577 | None:intergenic |
| ATCAAGGCTTTCAATTCTGT+TGG | 0.426673 | 7.3:-12886910 | None:intergenic |
| AGGCGGTTTGAACCGGCAAC+CGG | 0.426732 | 7.3:+12883937 | MS.gene09870:CDS |
| AAATTTAGATACATACATCT+AGG | 0.429419 | 7.3:+12887111 | MS.gene09870:intron |
| GCAACATTCTTGCGTGTTGT+TGG | 0.429964 | 7.3:+12886496 | MS.gene09870:CDS |
| TGGTTTAGATGCCCAGATAC+AGG | 0.432553 | 7.3:+12885519 | MS.gene09870:CDS |
| CGAAGTTTGCACTTCGATAA+CGG | 0.436584 | 7.3:-12884091 | None:intergenic |
| TCGCAAACAGCGAAAACAAA+AGG | 0.439274 | 7.3:+12884033 | MS.gene09870:CDS |
| CCGTCTGGTTTCCGGTCACC+CGG | 0.444415 | 7.3:-12883956 | None:intergenic |
| TGTTTGCGACCGACGCGAGC+CGG | 0.446908 | 7.3:-12884019 | None:intergenic |
| GAGTTGCTGAACCAGTTAGA+TGG | 0.449762 | 7.3:+12886849 | MS.gene09870:CDS |
| CTTCACATATACAATCCTTC+AGG | 0.456387 | 7.3:-12888928 | None:intergenic |
| TATAAAATGACTCCCTTTGG+AGG | 0.457417 | 7.3:-12885607 | None:intergenic |
| TGCCGGTTCAAACCGCCTCC+TGG | 0.458290 | 7.3:-12883932 | None:intergenic |
| CATACAGTTCAGGATGTGTA+AGG | 0.459525 | 7.3:-12885567 | None:intergenic |
| TTCATCAATAAAGACAATAG+AGG | 0.461693 | 7.3:-12886599 | None:intergenic |
| GTTGGACCGGAGTATTATGT+TGG | 0.467154 | 7.3:+12884310 | MS.gene09870:CDS |
| TTATATGGGGAACCTGGAAC+CGG | 0.467650 | 7.3:+12885625 | MS.gene09870:CDS |
| ATGACTAAGGATGAGTTCTC+TGG | 0.469513 | 7.3:+12887173 | MS.gene09870:CDS |
| ACGCGAGCCGGTGGTGCGGC+CGG | 0.471755 | 7.3:-12884007 | None:intergenic |
| AGTAACTTCTAACCTTCATT+CGG | 0.472587 | 7.3:-12887250 | None:intergenic |
| TTATGTTTAAGAAGAAAGAA+GGG | 0.473265 | 7.3:+12888902 | MS.gene09870:CDS |
| TGTTTCAAGTTCGGTTGGAC+CGG | 0.476783 | 7.3:+12884297 | MS.gene09870:CDS |
| TTTACGAGAACGCCGAATGA+AGG | 0.481823 | 7.3:+12887238 | MS.gene09870:CDS |
| TGAACCGGCAACCGGGTGAC+CGG | 0.482682 | 7.3:+12883945 | MS.gene09870:CDS |
| CGACCTGGTCTTAGCAGAGC+TGG | 0.483758 | 7.3:-12886933 | None:intergenic |
| TTGGACCGGAGTATTATGTT+GGG | 0.486241 | 7.3:+12884311 | MS.gene09870:CDS |
| ACTGAAACTGGAACGAATCA+AGG | 0.486524 | 7.3:+12884117 | MS.gene09870:CDS |
| CTTTGTTGATAAGGATCAGT+TGG | 0.488476 | 7.3:+12884342 | MS.gene09870:CDS |
| CGCAAACAGCGAAAACAAAA+GGG | 0.492686 | 7.3:+12884034 | MS.gene09870:CDS |
| AAAGCAATATGTACCGAAGC+TGG | 0.494002 | 7.3:+12887206 | MS.gene09870:CDS |
| TCAGGAAAGGTTGAAGCCTC+AGG | 0.495323 | 7.3:+12884174 | MS.gene09870:CDS |
| TAAGACCAGGTCGAATAGAC+AGG | 0.501709 | 7.3:+12886943 | MS.gene09870:CDS |
| GGCTGCGTCGCGGTTGCCGA+CGG | 0.504570 | 7.3:+12884063 | MS.gene09870:CDS |
| ATTCGAACCGGCCGCACCAC+CGG | 0.509282 | 7.3:+12884000 | MS.gene09870:CDS |
| CGGCAACCGCGACGCAGCCT+CGG | 0.510404 | 7.3:-12884059 | None:intergenic |
| GCTATTGTTTCAAGTTCGGT+TGG | 0.512463 | 7.3:+12884292 | MS.gene09870:CDS |
| ACCTTCATTACAGAGACCAT+TGG | 0.516269 | 7.3:-12885460 | None:intergenic |
| TAAAGCAAGTAAGCCAGCTT+CGG | 0.519256 | 7.3:-12887219 | None:intergenic |
| GTCTTAGCAGAGCTGGATCA+AGG | 0.525057 | 7.3:-12886926 | None:intergenic |
| TCTTCAGCTTTCTCCTCCTG+AGG | 0.525355 | 7.3:-12884190 | None:intergenic |
| CTCTGTAATGAAGGTTGAGA+AGG | 0.525660 | 7.3:+12885468 | MS.gene09870:CDS |
| CTCTCCCTGATATCAAAACT+AGG | 0.526151 | 7.3:+12886979 | MS.gene09870:CDS |
| CGTGGTTCGCCTATGAGTGT+TGG | 0.527223 | 7.3:+12884238 | MS.gene09870:CDS |
| TGCCTTCTTAAAATCAGCAT+GGG | 0.528839 | 7.3:-12888869 | None:intergenic |
| TCAAGATGAAGTTGATCCAA+TGG | 0.539698 | 7.3:+12885444 | MS.gene09870:CDS |
| TTGCCTTCTTAAAATCAGCA+TGG | 0.546147 | 7.3:-12888870 | None:intergenic |
| TCTAAGGTTGATGATCTTCG+TGG | 0.546817 | 7.3:+12884220 | MS.gene09870:CDS |
| ACCGACGCGAGCCGGTGGTG+CGG | 0.547884 | 7.3:-12884011 | None:intergenic |
| AAAGGACAAGAAATTCGAAC+CGG | 0.554284 | 7.3:+12883988 | MS.gene09870:CDS |
| ATTGATGAAATTGACGCTGT+TGG | 0.554458 | 7.3:+12886613 | MS.gene09870:CDS |
| GAATCATATGCTGACATTGG+TGG | 0.555368 | 7.3:+12885499 | MS.gene09870:CDS |
| GCCGCACCACCGGCTCGCGT+CGG | 0.558486 | 7.3:+12884010 | MS.gene09870:CDS |
| GGCGGTTTGAACCGGCAACC+GGG | 0.577140 | 7.3:+12883938 | MS.gene09870:CDS |
| TCCAATGGTCTCTGTAATGA+AGG | 0.577840 | 7.3:+12885459 | MS.gene09870:CDS |
| GAATGTTGCTGATGTTGAGT+TGG | 0.578313 | 7.3:-12886482 | None:intergenic |
| ATTGGTATCAAGCCTCCAAA+GGG | 0.581334 | 7.3:+12885595 | MS.gene09870:CDS |
| TATTGGTATCAAGCCTCCAA+AGG | 0.581644 | 7.3:+12885594 | MS.gene09870:CDS |
| CATATGGGTCAAGGAACACC+AGG | 0.582913 | 7.3:+12883914 | None:intergenic |
| TCATCAATAAAGACAATAGA+GGG | 0.582931 | 7.3:-12886598 | None:intergenic |
| GATAAGGATCAGTTGGAACC+TGG | 0.586516 | 7.3:+12884349 | MS.gene09870:CDS |
| TATGTTTAAGAAGAAAGAAG+GGG | 0.587164 | 7.3:+12888903 | MS.gene09870:CDS |
| GTGGAGAGCGTGAAATTCAA+AGG | 0.587676 | 7.3:+12886817 | MS.gene09870:CDS |
| AGATGGTCCAAAACTTGTGA+GGG | 0.588030 | 7.3:+12886546 | MS.gene09870:CDS |
| TACAGTTCAGGATGTGTAAG+GGG | 0.589268 | 7.3:-12885565 | None:intergenic |
| TGCATCAAAATAGCGCAACC+AGG | 0.595025 | 7.3:-12884367 | None:intergenic |
| ATACAGTTCAGGATGTGTAA+GGG | 0.600073 | 7.3:-12885566 | None:intergenic |
| TGCAGGTATGATGCTCACTC+AGG | 0.601841 | 7.3:+12886795 | MS.gene09870:intron |
| CGGAAAGACACTTCTTGCAA+AGG | 0.603905 | 7.3:+12885645 | MS.gene09870:CDS |
| CGTTATCGAAGTGCAAACTT+CGG | 0.605718 | 7.3:+12884092 | MS.gene09870:CDS |
| TGAAATTCAAAGGACCATGT+TGG | 0.608156 | 7.3:+12886827 | MS.gene09870:CDS |
| GGTCAAGGAACACCAGGAGG+CGG | 0.609421 | 7.3:+12883920 | MS.gene09870:CDS |
| AAGAAAGAAGGGGTGCCTGA+AGG | 0.613773 | 7.3:+12888913 | MS.gene09870:CDS |
| AGTTTGTAGCGAATCAGGAA+AGG | 0.618718 | 7.3:+12884161 | MS.gene09870:CDS |
| TTGGAATCATATGCTGACAT+TGG | 0.619347 | 7.3:+12885496 | MS.gene09870:CDS |
| TTGCGACCGACGCGAGCCGG+TGG | 0.620039 | 7.3:-12884016 | None:intergenic |
| CTGGTTCAGCAACTCCAACA+TGG | 0.624925 | 7.3:-12886841 | None:intergenic |
| CCGGGTGACCGGAAACCAGA+CGG | 0.626668 | 7.3:+12883956 | MS.gene09870:CDS |
| GATCCAGCTCTGCTAAGACC+AGG | 0.627123 | 7.3:+12886930 | MS.gene09870:CDS |
| CAACTGATCCTTATCAACAA+AGG | 0.630631 | 7.3:-12884341 | None:intergenic |
| GAGATGGTCCAAAACTTGTG+AGG | 0.639633 | 7.3:+12886545 | MS.gene09870:CDS |
| TTGACGCTGTTGGTACAAAG+AGG | 0.641384 | 7.3:+12886623 | MS.gene09870:CDS |
| ATGTCAGCATATGATTCCAA+AGG | 0.644573 | 7.3:-12885493 | None:intergenic |
| GGAAAGGTTGAAGCCTCAGG+AGG | 0.645072 | 7.3:+12884177 | MS.gene09870:CDS |
| AAAATCCCAACATAATACTC+CGG | 0.653134 | 7.3:-12884316 | None:intergenic |
| GCGAAAACAAAAGGGTTCCG+AGG | 0.654416 | 7.3:+12884042 | MS.gene09870:CDS |
| TTCGATAACGGAGTTACCGT+CGG | 0.658917 | 7.3:-12884079 | None:intergenic |
| AGGTATGATGCTCACTCAGG+TGG | 0.668411 | 7.3:+12886798 | MS.gene09870:intron |
| CCGAACTTGAAACAATAGCA+TGG | 0.672829 | 7.3:-12884288 | None:intergenic |
| AGGGTTCCGAGGCTGCGTCG+CGG | 0.672989 | 7.3:+12884053 | MS.gene09870:CDS |
| ATGGGTCAAGGAACACCAGG+AGG | 0.699908 | 7.3:+12883917 | MS.gene09870:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTTATAAAAACTTTTG+AGG | - | chr7.3:12884611-12884630 | None:intergenic | 10.0% |
| !!! | CAAAAGTTTTTATAAAATTT+TGG | + | chr7.3:12884611-12884630 | MS.gene09870:intron | 10.0% |
| !! | AAAAAAAAATATTAGAATGG+TGG | + | chr7.3:12888610-12888629 | MS.gene09870:intron | 15.0% |
| !! | AGCTTAAAGATATTAATATT+TGG | + | chr7.3:12885171-12885190 | MS.gene09870:intron | 15.0% |
| !! | CAATTATATGCATTAATTAA+CGG | + | chr7.3:12886352-12886371 | MS.gene09870:intron | 15.0% |
| !! | TAACTGAATATATGAATTTA+GGG | - | chr7.3:12887430-12887449 | None:intergenic | 15.0% |
| !! | TATATAATTTATATGATGCT+TGG | + | chr7.3:12885387-12885406 | MS.gene09870:intron | 15.0% |
| !! | TGTATTAAGTATCAATAAAA+TGG | + | chr7.3:12885007-12885026 | MS.gene09870:intron | 15.0% |
| !! | TTAACTGAATATATGAATTT+AGG | - | chr7.3:12887431-12887450 | None:intergenic | 15.0% |
| !!! | ATATCTTAATTGTACTATTT+TGG | + | chr7.3:12887276-12887295 | MS.gene09870:intron | 15.0% |
| !!! | ATTATTAAGAAAAAAGTACA+CGG | - | chr7.3:12885085-12885104 | None:intergenic | 15.0% |
| !! | AAATTTAGATACATACATCT+AGG | + | chr7.3:12887111-12887130 | MS.gene09870:intron | 20.0% |
| !! | AATAAAACAAAACAAAAGAG+TGG | - | chr7.3:12888183-12888202 | None:intergenic | 20.0% |
| !! | AATAAAACTATAAAGAGAAG+AGG | - | chr7.3:12885919-12885938 | None:intergenic | 20.0% |
| !! | AATATAAATGTCAGAAAACA+CGG | - | chr7.3:12888266-12888285 | None:intergenic | 20.0% |
| !! | ATAAAACAAAACAAAAGAGT+GGG | - | chr7.3:12888182-12888201 | None:intergenic | 20.0% |
| !! | ATATAAATGTAAAAATACCC+AGG | - | chr7.3:12888318-12888337 | None:intergenic | 20.0% |
| !! | CTGTTAATTATACTGTTAAT+TGG | + | chr7.3:12888443-12888462 | MS.gene09870:intron | 20.0% |
| !! | GAAAAATATTATCCAATCTT+GGG | + | chr7.3:12885885-12885904 | MS.gene09870:intron | 20.0% |
| !! | GAATAACAAAATTATAGCAT+AGG | + | chr7.3:12887451-12887470 | MS.gene09870:intron | 20.0% |
| !! | GTGAAATAAACCAAAAAAAT+GGG | - | chr7.3:12887865-12887884 | None:intergenic | 20.0% |
| !! | TAACAGTATAATTAACAGTA+TGG | - | chr7.3:12888441-12888460 | None:intergenic | 20.0% |
| !! | TAACTAAAACTCAATAAGAT+TGG | + | chr7.3:12885835-12885854 | MS.gene09870:intron | 20.0% |
| !! | TCTATGATAATTCATACAAA+TGG | + | chr7.3:12885812-12885831 | MS.gene09870:intron | 20.0% |
| !! | TGAAAAATATTATCCAATCT+TGG | + | chr7.3:12885884-12885903 | MS.gene09870:intron | 20.0% |
| !! | TTAAGTATCAATAAAATGGT+TGG | + | chr7.3:12885011-12885030 | MS.gene09870:intron | 20.0% |
| !! | TTATGTTTAAGAAGAAAGAA+GGG | + | chr7.3:12888902-12888921 | MS.gene09870:CDS | 20.0% |
| !!! | ACATCTAAATTGTACTATTT+TGG | + | chr7.3:12887304-12887323 | MS.gene09870:intron | 20.0% |
| !!! | ATAGTACAATTTAGATGTTT+TGG | - | chr7.3:12887302-12887321 | None:intergenic | 20.0% |
| !!! | GAATTGATTCAAAAATACTT+AGG | + | chr7.3:12886523-12886542 | MS.gene09870:CDS | 20.0% |
| !!! | TTAAAGGTGTAAATTGAAAA+AGG | - | chr7.3:12887511-12887530 | None:intergenic | 20.0% |
| ! | AACATAATCAACATGTAAAG+TGG | + | chr7.3:12885120-12885139 | MS.gene09870:intron | 25.0% |
| ! | ACATAATCAACATGTAAAGT+GGG | + | chr7.3:12885121-12885140 | MS.gene09870:intron | 25.0% |
| ! | AGAATTTATGAGTAGTAACA+TGG | - | chr7.3:12886133-12886152 | None:intergenic | 25.0% |
| ! | ATATAAATGTCAGAAAACAC+GGG | - | chr7.3:12888265-12888284 | None:intergenic | 25.0% |
| ! | ATATTTCTCAAAAAGTCTTC+CGG | - | chr7.3:12886196-12886215 | None:intergenic | 25.0% |
| ! | ATGGTGATTATTTGATTCTT+AGG | + | chr7.3:12884429-12884448 | MS.gene09870:intron | 25.0% |
| ! | ATTAATATTTGGCTGTTATG+TGG | + | chr7.3:12885182-12885201 | MS.gene09870:intron | 25.0% |
| ! | ATTCAAAAATACTTAGGAGA+TGG | + | chr7.3:12886529-12886548 | MS.gene09870:CDS | 25.0% |
| ! | CAAAATTATAGCATAGGTTA+TGG | + | chr7.3:12887457-12887476 | MS.gene09870:intron | 25.0% |
| ! | CGTGAAATAAACCAAAAAAA+TGG | - | chr7.3:12887866-12887885 | None:intergenic | 25.0% |
| ! | GTTATGTTTAAGAAGAAAGA+AGG | + | chr7.3:12888901-12888920 | MS.gene09870:CDS | 25.0% |
| ! | TAAGTGAGAAAACATATAGT+TGG | + | chr7.3:12884523-12884542 | MS.gene09870:intron | 25.0% |
| ! | TATGTTTAAGAAGAAAGAAG+GGG | + | chr7.3:12888903-12888922 | MS.gene09870:CDS | 25.0% |
| ! | TCATCAATAAAGACAATAGA+GGG | - | chr7.3:12886601-12886620 | None:intergenic | 25.0% |
| ! | TCTCATTACCTCAAATTATT+TGG | - | chr7.3:12887569-12887588 | None:intergenic | 25.0% |
| ! | TCTTAATAATACTCTTGTTC+AGG | + | chr7.3:12885095-12885114 | MS.gene09870:intron | 25.0% |
| ! | TGAACATATCTTAATTGACA+TGG | + | chr7.3:12885287-12885306 | MS.gene09870:intron | 25.0% |
| ! | TGCTAAATCAAGTGAATTAA+GGG | - | chr7.3:12888519-12888538 | None:intergenic | 25.0% |
| ! | TGGTGATTATTTGATTCTTA+GGG | + | chr7.3:12884430-12884449 | MS.gene09870:intron | 25.0% |
| ! | TTCATCAATAAAGACAATAG+AGG | - | chr7.3:12886602-12886621 | None:intergenic | 25.0% |
| !! | AATCAAGGACTATTTGTTAA+TGG | + | chr7.3:12884132-12884151 | MS.gene09870:CDS | 25.0% |
| !! | ATAATTTGAGGTAATGAGAT+TGG | + | chr7.3:12887570-12887589 | MS.gene09870:intron | 25.0% |
| !! | CTCAAGTATAAACTATTTTG+AGG | - | chr7.3:12884830-12884849 | None:intergenic | 25.0% |
| !! | TAATTTGAGGTAATGAGATT+GGG | + | chr7.3:12887571-12887590 | MS.gene09870:intron | 25.0% |
| !! | TTCTTTAATTTCCTGTATCT+GGG | - | chr7.3:12885533-12885552 | None:intergenic | 25.0% |
| !!! | AGGGTTTTGTTTGAATATAT+TGG | + | chr7.3:12884449-12884468 | MS.gene09870:intron | 25.0% |
| !!! | AGTAGTTTATCTTGTTTTTC+AGG | + | chr7.3:12888843-12888862 | MS.gene09870:intron | 25.0% |
| !!! | CACTTAAAATTTTGAGAGAA+AGG | + | chr7.3:12887622-12887641 | MS.gene09870:intron | 25.0% |
| !!! | CTTTTTTCTCTTGATTGTTA+TGG | + | chr7.3:12884410-12884429 | MS.gene09870:intron | 25.0% |
| !!! | GAATTTTTAGGTTTAGGTTT+AGG | + | chr7.3:12884483-12884502 | MS.gene09870:intron | 25.0% |
| !!! | TCTCTCAAAATTTTAAGTGA+TGG | - | chr7.3:12887621-12887640 | None:intergenic | 25.0% |
| !!! | TTCTTGGTATGTTTTTAAAC+TGG | + | chr7.3:12888642-12888661 | MS.gene09870:intron | 25.0% |
| !!! | TTTGGTTTTGGTTGTTTTTA+GGG | + | chr7.3:12884573-12884592 | MS.gene09870:intron | 25.0% |
| AAAATCCCAACATAATACTC+CGG | - | chr7.3:12884319-12884338 | None:intergenic | 30.0% | |
| AAACATACAGTGTTCTAACA+AGG | - | chr7.3:12887935-12887954 | None:intergenic | 30.0% | |
| AACATACAGTGTTCTAACAA+GGG | - | chr7.3:12887934-12887953 | None:intergenic | 30.0% | |
| ACAGATCATAAGTAGATGAA+AGG | - | chr7.3:12888157-12888176 | None:intergenic | 30.0% | |
| ACGGAATCATACTAAATATG+AGG | - | chr7.3:12885320-12885339 | None:intergenic | 30.0% | |
| AGAAGAATTTGTCATGACTA+AGG | + | chr7.3:12887160-12887179 | MS.gene09870:CDS | 30.0% | |
| AGGTGTAAATTGAAAAAGGT+TGG | - | chr7.3:12887507-12887526 | None:intergenic | 30.0% | |
| AGTAACTTCTAACCTTCATT+CGG | - | chr7.3:12887253-12887272 | None:intergenic | 30.0% | |
| AGTATCAATAAAATGGTTGG+CGG | + | chr7.3:12885014-12885033 | MS.gene09870:intron | 30.0% | |
| ATGATTCCGTGACTTTATTA+TGG | + | chr7.3:12885330-12885349 | MS.gene09870:intron | 30.0% | |
| ATGTGGAAGGAAATATTTGT+TGG | + | chr7.3:12887341-12887360 | MS.gene09870:intron | 30.0% | |
| ATTATAGCATAGGTTATGGT+CGG | + | chr7.3:12887461-12887480 | MS.gene09870:intron | 30.0% | |
| ATTTGTGAGCAAGAGAAAAA+AGG | - | chr7.3:12888070-12888089 | None:intergenic | 30.0% | |
| CGGAATCATACTAAATATGA+GGG | - | chr7.3:12885319-12885338 | None:intergenic | 30.0% | |
| CTGCTAAATCAAGTGAATTA+AGG | - | chr7.3:12888520-12888539 | None:intergenic | 30.0% | |
| GATCTTGCTTTGCATTTAAT+TGG | + | chr7.3:12888721-12888740 | MS.gene09870:intron | 30.0% | |
| GCTAAATCAAGTGAATTAAG+GGG | - | chr7.3:12888518-12888537 | None:intergenic | 30.0% | |
| GGAATCATACTAAATATGAG+GGG | - | chr7.3:12885318-12885337 | None:intergenic | 30.0% | |
| TAGAATCAAAACCATCTAAC+TGG | - | chr7.3:12886863-12886882 | None:intergenic | 30.0% | |
| TAGAGATGCCAAATAATTTG+AGG | + | chr7.3:12887558-12887577 | MS.gene09870:intron | 30.0% | |
| TGAGAAAACATATAGTTGGA+AGG | + | chr7.3:12884527-12884546 | MS.gene09870:intron | 30.0% | |
| TGTTATTGACCTGTTTGTTT+AGG | + | chr7.3:12888409-12888428 | MS.gene09870:intron | 30.0% | |
| TTAGCAGAGTGGAAAAAAAA+TGG | + | chr7.3:12888533-12888552 | MS.gene09870:intron | 30.0% | |
| TTATCCAATCTTGGGTTAAA+TGG | + | chr7.3:12885893-12885912 | MS.gene09870:intron | 30.0% | |
| TTCACACCATAATAAAGTCA+CGG | - | chr7.3:12885339-12885358 | None:intergenic | 30.0% | |
| TTTGTGAGCAAGAGAAAAAA+GGG | - | chr7.3:12888069-12888088 | None:intergenic | 30.0% | |
| TTTGTGTTCTATCTTCACTT+GGG | + | chr7.3:12885212-12885231 | MS.gene09870:intron | 30.0% | |
| ! | AAGATAAACTACTGATGATG+AGG | - | chr7.3:12888836-12888855 | None:intergenic | 30.0% |
| ! | AGATAAACTACTGATGATGA+GGG | - | chr7.3:12888835-12888854 | None:intergenic | 30.0% |
| ! | ATATAGTTGGAAGGTTGATT+GGG | + | chr7.3:12884536-12884555 | MS.gene09870:intron | 30.0% |
| ! | ATTGTCTTCTGCTAGTTTAT+TGG | + | chr7.3:12888748-12888767 | MS.gene09870:intron | 30.0% |
| ! | CTCCTGAAAAGATCAATTTT+GGG | + | chr7.3:12887666-12887685 | MS.gene09870:intron | 30.0% |
| ! | CTTCTTTAATTTCCTGTATC+TGG | - | chr7.3:12885534-12885553 | None:intergenic | 30.0% |
| ! | GAAGATTGCGATGAATTTTT+AGG | + | chr7.3:12884471-12884490 | MS.gene09870:intron | 30.0% |
| ! | GACATAGATGAGAGAATTTT+GGG | + | chr7.3:12885143-12885162 | MS.gene09870:intron | 30.0% |
| ! | GATTTTGTCCTTTGTTGATA+AGG | + | chr7.3:12884333-12884352 | MS.gene09870:CDS | 30.0% |
| ! | GGGATTTTCTATTGCATTTA+TGG | + | chr7.3:12885232-12885251 | MS.gene09870:intron | 30.0% |
| ! | TATAAAATTTTGGGCCTGTT+TGG | + | chr7.3:12884621-12884640 | MS.gene09870:intron | 30.0% |
| ! | TCCTGAAAAGATCAATTTTG+GGG | + | chr7.3:12887667-12887686 | MS.gene09870:intron | 30.0% |
| ! | TTTTGATGCATAACAAGGTA+GGG | + | chr7.3:12884380-12884399 | MS.gene09870:intron | 30.0% |
| !! | AAAGGGAGTCATTTTATATG+GGG | + | chr7.3:12885612-12885631 | MS.gene09870:CDS | 30.0% |
| !! | ATTTTGATGCATAACAAGGT+AGG | + | chr7.3:12884379-12884398 | MS.gene09870:intron | 30.0% |
| !! | CAAAGGGAGTCATTTTATAT+GGG | + | chr7.3:12885611-12885630 | MS.gene09870:CDS | 30.0% |
| !! | TTGAATGTGGCATTTTGTTT+TGG | + | chr7.3:12886698-12886717 | MS.gene09870:intron | 30.0% |
| !! | TTGGTATGTTTTTAAACTGG+CGG | + | chr7.3:12888645-12888664 | MS.gene09870:intron | 30.0% |
| !!! | CTTGTACCTTGTATTTTTTG+AGG | + | chr7.3:12888786-12888805 | MS.gene09870:intron | 30.0% |
| !!! | GTTTGGTTTTGGTTGTTTTT+AGG | + | chr7.3:12884572-12884591 | MS.gene09870:intron | 30.0% |
| !!! | TACCTTGTATTTTTTGAGGT+GGG | + | chr7.3:12888790-12888809 | MS.gene09870:intron | 30.0% |
| !!! | TGAATGTGGCATTTTGTTTT+GGG | + | chr7.3:12886699-12886718 | MS.gene09870:intron | 30.0% |
| !!! | TGCGATGAATTTTTAGGTTT+AGG | + | chr7.3:12884477-12884496 | MS.gene09870:intron | 30.0% |
| !!! | TTAGATGGTTTTGATTCTAG+AGG | + | chr7.3:12886864-12886883 | MS.gene09870:CDS | 30.0% |
| !!! | TTTCCTGCGACTTTTTTTAA+AGG | - | chr7.3:12887527-12887546 | None:intergenic | 30.0% |
| !!! | TTTTCATCCTGTTTTGAAGT+GGG | - | chr7.3:12885870-12885889 | None:intergenic | 30.0% |
| !!! | TTTTTCATCCTGTTTTGAAG+TGG | - | chr7.3:12885871-12885890 | None:intergenic | 30.0% |
| AAAAATACCCAGGACATGAA+TGG | - | chr7.3:12888308-12888327 | None:intergenic | 35.0% | |
| AAAGGACAAGAAATTCGAAC+CGG | + | chr7.3:12883988-12884007 | MS.gene09870:CDS | 35.0% | |
| AACCCACCTCAAAAAATACA+AGG | - | chr7.3:12888795-12888814 | None:intergenic | 35.0% | |
| AAGTGCAAGTAACCAAACAA+AGG | + | chr7.3:12886264-12886283 | MS.gene09870:intron | 35.0% | |
| AATGTGTCCTTTCTTGAATG+TGG | + | chr7.3:12886685-12886704 | MS.gene09870:intron | 35.0% | |
| AGATCTCGAATATGACTACT+AGG | - | chr7.3:12888706-12888725 | None:intergenic | 35.0% | |
| AGCTGAAGAAGATAGATCTA+AGG | + | chr7.3:12884204-12884223 | MS.gene09870:CDS | 35.0% | |
| AGTGATGGTTTAAGCCTTTA+AGG | - | chr7.3:12887606-12887625 | None:intergenic | 35.0% | |
| AGTGCAAGTAACCAAACAAA+GGG | + | chr7.3:12886265-12886284 | MS.gene09870:intron | 35.0% | |
| ATACAGTTCAGGATGTGTAA+GGG | - | chr7.3:12885569-12885588 | None:intergenic | 35.0% | |
| ATCAAGGCTTTCAATTCTGT+TGG | - | chr7.3:12886913-12886932 | None:intergenic | 35.0% | |
| ATCGAAACAGAGAAGGATAT+AGG | - | chr7.3:12887968-12887987 | None:intergenic | 35.0% | |
| ATGTCAGCATATGATTCCAA+AGG | - | chr7.3:12885496-12885515 | None:intergenic | 35.0% | |
| ATTAAAGCTCACGCATATGT+AGG | - | chr7.3:12888231-12888250 | None:intergenic | 35.0% | |
| ATTCACTTGATTTAGCAGAG+TGG | + | chr7.3:12888522-12888541 | MS.gene09870:intron | 35.0% | |
| ATTGATGAAATTGACGCTGT+TGG | + | chr7.3:12886613-12886632 | MS.gene09870:CDS | 35.0% | |
| CAAAATGCCACATTCAAGAA+AGG | - | chr7.3:12886695-12886714 | None:intergenic | 35.0% | |
| CAACTGATCCTTATCAACAA+AGG | - | chr7.3:12884344-12884363 | None:intergenic | 35.0% | |
| CAGCTTATGAACAATGTCAT+AGG | - | chr7.3:12884716-12884735 | None:intergenic | 35.0% | |
| CCAATATCTTCATACAGTTC+AGG | - | chr7.3:12885580-12885599 | None:intergenic | 35.0% | |
| CCATATAAAATGACTCCCTT+TGG | - | chr7.3:12885613-12885632 | None:intergenic | 35.0% | |
| CCTGAACTGTATGAAGATAT+TGG | + | chr7.3:12885577-12885596 | MS.gene09870:CDS | 35.0% | |
| CGTTATTGAGTATCAGCTTT+AGG | + | chr7.3:12886648-12886667 | MS.gene09870:intron | 35.0% | |
| CTTTGTGTTCTATCTTCACT+TGG | + | chr7.3:12885211-12885230 | MS.gene09870:intron | 35.0% | |
| GATGAGGGGTAAAAAAACAT+AGG | - | chr7.3:12888820-12888839 | None:intergenic | 35.0% | |
| GCATGTGATCTTTACTTGTA+TGG | + | chr7.3:12886325-12886344 | MS.gene09870:intron | 35.0% | |
| GTATCAATAAAATGGTTGGC+GGG | + | chr7.3:12885015-12885034 | MS.gene09870:intron | 35.0% | |
| GTGCTTGCATGTAAACTAAA+AGG | - | chr7.3:12888113-12888132 | None:intergenic | 35.0% | |
| TATAAAATGACTCCCTTTGG+AGG | - | chr7.3:12885610-12885629 | None:intergenic | 35.0% | |
| TCTAATAAGCCAAACCAAAC+AGG | - | chr7.3:12884638-12884657 | None:intergenic | 35.0% | |
| TCTGCTTCTTAAGTACTCAT+TGG | + | chr7.3:12886293-12886312 | MS.gene09870:intron | 35.0% | |
| TGAAATTCAAAGGACCATGT+TGG | + | chr7.3:12886827-12886846 | MS.gene09870:CDS | 35.0% | |
| TGAACTACGATATGTAGTCT+GGG | - | chr7.3:12887721-12887740 | None:intergenic | 35.0% | |
| TGCCTTCTTAAAATCAGCAT+GGG | - | chr7.3:12888872-12888891 | None:intergenic | 35.0% | |
| TTAAAGCTCACGCATATGTA+GGG | - | chr7.3:12888230-12888249 | None:intergenic | 35.0% | |
| TTATTTGCAGTTCATAGCAC+AGG | - | chr7.3:12884871-12884890 | None:intergenic | 35.0% | |
| TTGCCTTCTTAAAATCAGCA+TGG | - | chr7.3:12888873-12888892 | None:intergenic | 35.0% | |
| TTGGAATCATATGCTGACAT+TGG | + | chr7.3:12885496-12885515 | MS.gene09870:CDS | 35.0% | |
| TTGGGTAAGAATCTCCTTAA+AGG | + | chr7.3:12887589-12887608 | MS.gene09870:intron | 35.0% | |
| TTTCTCTTGCTCACAAATTC+TGG | + | chr7.3:12888072-12888091 | MS.gene09870:intron | 35.0% | |
| ! | AAAAGTTCCCTCACAAGTTT+TGG | - | chr7.3:12886556-12886575 | None:intergenic | 35.0% |
| ! | ACACCTTTAAAAAAAGTCGC+AGG | + | chr7.3:12887521-12887540 | MS.gene09870:intron | 35.0% |
| ! | AGAGAGATTTGTGTGGTTTT+TGG | + | chr7.3:12886058-12886077 | MS.gene09870:intron | 35.0% |
| ! | AGCATTTTTGTGTGTTTGAC+AGG | + | chr7.3:12885670-12885689 | MS.gene09870:intron | 35.0% |
| ! | CATATAGTTGGAAGGTTGAT+TGG | + | chr7.3:12884535-12884554 | MS.gene09870:intron | 35.0% |
| ! | CTTTGTTGATAAGGATCAGT+TGG | + | chr7.3:12884342-12884361 | MS.gene09870:CDS | 35.0% |
| ! | GATAAACTACTGATGATGAG+GGG | - | chr7.3:12888834-12888853 | None:intergenic | 35.0% |
| ! | GCATTTTTGTGTGTTTGACA+GGG | + | chr7.3:12885671-12885690 | MS.gene09870:intron | 35.0% |
| ! | GCTCCTGAAAAGATCAATTT+TGG | + | chr7.3:12887665-12887684 | MS.gene09870:intron | 35.0% |
| ! | GGACATAGATGAGAGAATTT+TGG | + | chr7.3:12885142-12885161 | MS.gene09870:intron | 35.0% |
| ! | GTACACTATGCTCTTTTTGA+GGG | + | chr7.3:12885037-12885056 | MS.gene09870:intron | 35.0% |
| ! | GTGAATTTTGTGATGCAGTA+AGG | + | chr7.3:12885354-12885373 | MS.gene09870:intron | 35.0% |
| ! | TCAAGATGAAGTTGATCCAA+TGG | + | chr7.3:12885444-12885463 | MS.gene09870:CDS | 35.0% |
| ! | TTCTCTAAGAGAGATTTGTG+TGG | + | chr7.3:12886051-12886070 | MS.gene09870:intron | 35.0% |
| ! | TTTTGAACCCACTTCAAAAC+AGG | + | chr7.3:12885860-12885879 | MS.gene09870:intron | 35.0% |
| !! | ATGGTGGTGAAAGTTTTTCT+TGG | + | chr7.3:12888626-12888645 | MS.gene09870:intron | 35.0% |
| !! | CCAAAGGGAGTCATTTTATA+TGG | + | chr7.3:12885610-12885629 | MS.gene09870:CDS | 35.0% |
| !! | CCATGCTATTGTTTCAAGTT+CGG | + | chr7.3:12884288-12884307 | MS.gene09870:CDS | 35.0% |
| !! | TACACTATGCTCTTTTTGAG+GGG | + | chr7.3:12885038-12885057 | MS.gene09870:intron | 35.0% |
| !!! | CGCTATTTTGATGCATAACA+AGG | + | chr7.3:12884375-12884394 | MS.gene09870:CDS | 35.0% |
| !!! | GCTAATCTCACCCATTTTTT+TGG | + | chr7.3:12887852-12887871 | MS.gene09870:intron | 35.0% |
| !!! | GTACCTTGTATTTTTTGAGG+TGG | + | chr7.3:12888789-12888808 | MS.gene09870:intron | 35.0% |
| !!! | GTCTCCTAGTTTTGATATCA+GGG | - | chr7.3:12886986-12887005 | None:intergenic | 35.0% |
| !!! | TTGTATTTTTTGAGGTGGGT+TGG | + | chr7.3:12888794-12888813 | MS.gene09870:intron | 35.0% |
| AAAGCAATATGTACCGAAGC+TGG | + | chr7.3:12887206-12887225 | MS.gene09870:CDS | 40.0% | |
| AAAGCCAGAAAATTCAGGCT+AGG | - | chr7.3:12888037-12888056 | None:intergenic | 40.0% | |
| AAGTCGCAGGAAAAATGAAG+TGG | + | chr7.3:12887534-12887553 | MS.gene09870:intron | 40.0% | |
| AATATGACTACTAGGCCTTG+CGG | - | chr7.3:12888698-12888717 | None:intergenic | 40.0% | |
| ACCAAAACCAAACATACACG+AGG | - | chr7.3:12884565-12884584 | None:intergenic | 40.0% | |
| ACCTTCATTACAGAGACCAT+TGG | - | chr7.3:12885463-12885482 | None:intergenic | 40.0% | |
| ACTGAAACTGGAACGAATCA+AGG | + | chr7.3:12884117-12884136 | MS.gene09870:CDS | 40.0% | |
| AGAAGAGTTTGTAGCGAATC+AGG | + | chr7.3:12884156-12884175 | MS.gene09870:CDS | 40.0% | |
| AGATGGTCCAAAACTTGTGA+GGG | + | chr7.3:12886546-12886565 | MS.gene09870:CDS | 40.0% | |
| AGCAGAAACAACCCTTTGTT+TGG | - | chr7.3:12886279-12886298 | None:intergenic | 40.0% | |
| AGTCGCAGGAAAAATGAAGT+GGG | + | chr7.3:12887535-12887554 | MS.gene09870:intron | 40.0% | |
| AGTTTGTAGCGAATCAGGAA+AGG | + | chr7.3:12884161-12884180 | MS.gene09870:CDS | 40.0% | |
| ATCTGCAAAGCCAAAACACT+CGG | - | chr7.3:12887823-12887842 | None:intergenic | 40.0% | |
| ATGACTAAGGATGAGTTCTC+TGG | + | chr7.3:12887173-12887192 | MS.gene09870:CDS | 40.0% | |
| ATTGGTATCAAGCCTCCAAA+GGG | + | chr7.3:12885595-12885614 | MS.gene09870:CDS | 40.0% | |
| CAAAAAGCTGATCATGTGGA+AGG | + | chr7.3:12887328-12887347 | MS.gene09870:intron | 40.0% | |
| CAAACTTCGGTTACTGAAAC+TGG | + | chr7.3:12884105-12884124 | MS.gene09870:CDS | 40.0% | |
| CAAGAGAAAAAAGGGTTGCT+GGG | - | chr7.3:12888061-12888080 | None:intergenic | 40.0% | |
| CAAGAGTCATGACATTCACT+AGG | + | chr7.3:12884920-12884939 | MS.gene09870:intron | 40.0% | |
| CATACAGTTCAGGATGTGTA+AGG | - | chr7.3:12885570-12885589 | None:intergenic | 40.0% | |
| CCGAACTTGAAACAATAGCA+TGG | - | chr7.3:12884291-12884310 | None:intergenic | 40.0% | |
| CGAAGTTTGCACTTCGATAA+CGG | - | chr7.3:12884094-12884113 | None:intergenic | 40.0% | |
| CGCAAACAGCGAAAACAAAA+GGG | + | chr7.3:12884034-12884053 | MS.gene09870:CDS | 40.0% | |
| CGTTATCGAAGTGCAAACTT+CGG | + | chr7.3:12884092-12884111 | MS.gene09870:CDS | 40.0% | |
| CTCAAAAAGTCTTCCGGTAT+GGG | - | chr7.3:12886190-12886209 | None:intergenic | 40.0% | |
| CTCTCCCTGATATCAAAACT+AGG | + | chr7.3:12886979-12886998 | MS.gene09870:CDS | 40.0% | |
| CTCTGTAATGAAGGTTGAGA+AGG | + | chr7.3:12885468-12885487 | MS.gene09870:CDS | 40.0% | |
| CTGAACTACGATATGTAGTC+TGG | - | chr7.3:12887722-12887741 | None:intergenic | 40.0% | |
| GAATCATATGCTGACATTGG+TGG | + | chr7.3:12885499-12885518 | MS.gene09870:CDS | 40.0% | |
| GAATGTTGCTGATGTTGAGT+TGG | - | chr7.3:12886485-12886504 | None:intergenic | 40.0% | |
| TAAAGCAAGTAAGCCAGCTT+CGG | - | chr7.3:12887222-12887241 | None:intergenic | 40.0% | |
| TACAGTTCAGGATGTGTAAG+GGG | - | chr7.3:12885568-12885587 | None:intergenic | 40.0% | |
| TACCAGGTTCTTTCTGTTGT+TGG | + | chr7.3:12885415-12885434 | MS.gene09870:intron | 40.0% | |
| TATTGGTATCAAGCCTCCAA+AGG | + | chr7.3:12885594-12885613 | MS.gene09870:CDS | 40.0% | |
| TCAAAAAGTCTTCCGGTATG+GGG | - | chr7.3:12886189-12886208 | None:intergenic | 40.0% | |
| TCAAGATTGCCAACACTCAT+AGG | - | chr7.3:12884250-12884269 | None:intergenic | 40.0% | |
| TCCAATGGTCTCTGTAATGA+AGG | + | chr7.3:12885459-12885478 | MS.gene09870:CDS | 40.0% | |
| TCGCAAACAGCGAAAACAAA+AGG | + | chr7.3:12884033-12884052 | MS.gene09870:CDS | 40.0% | |
| TCTCAAAAAGTCTTCCGGTA+TGG | - | chr7.3:12886191-12886210 | None:intergenic | 40.0% | |
| TGGAGCTTACCTAAACAAAC+AGG | - | chr7.3:12888421-12888440 | None:intergenic | 40.0% | |
| TGGGTTCTTTCGAATGAAGA+AGG | - | chr7.3:12887702-12887721 | None:intergenic | 40.0% | |
| ! | AACTAGGAGACGCATTTTCA+CGG | + | chr7.3:12886995-12887014 | MS.gene09870:CDS | 40.0% |
| ! | AATTTTGGGCCTGTTTGGTT+TGG | + | chr7.3:12884626-12884645 | MS.gene09870:intron | 40.0% |
| ! | ACTTTTCTGATATGCCATGC+AGG | + | chr7.3:12886778-12886797 | MS.gene09870:intron | 40.0% |
| ! | AGAGTGCTTTCTTTGCTTTC+AGG | + | chr7.3:12886453-12886472 | MS.gene09870:intron | 40.0% |
| ! | ATGCGTGAGCTTTAATGCAT+TGG | + | chr7.3:12888235-12888254 | MS.gene09870:intron | 40.0% |
| ! | ATTTTCCTGTCTATTCGACC+TGG | - | chr7.3:12886951-12886970 | None:intergenic | 40.0% |
| ! | CTTCCACATGATCAGCTTTT+TGG | - | chr7.3:12887330-12887349 | None:intergenic | 40.0% |
| ! | GCCCCAAAATTGATCTTTTC+AGG | - | chr7.3:12887671-12887690 | None:intergenic | 40.0% |
| ! | GGTACACTATGCTCTTTTTG+AGG | + | chr7.3:12885036-12885055 | MS.gene09870:intron | 40.0% |
| ! | TGACATGTGTTTTGTGAGTC+TGG | + | chr7.3:12884668-12884687 | MS.gene09870:intron | 40.0% |
| ! | TGCGTGAGCTTTAATGCATT+GGG | + | chr7.3:12888236-12888255 | MS.gene09870:intron | 40.0% |
| ! | TTGGACCGGAGTATTATGTT+GGG | + | chr7.3:12884311-12884330 | MS.gene09870:CDS | 40.0% |
| !! | ACCTCGTGTATGTTTGGTTT+TGG | + | chr7.3:12884561-12884580 | MS.gene09870:intron | 40.0% |
| !! | CTTTGCAAGAAGTGTCTTTC+CGG | - | chr7.3:12885647-12885666 | None:intergenic | 40.0% |
| !! | GCTATTGTTTCAAGTTCGGT+TGG | + | chr7.3:12884292-12884311 | MS.gene09870:CDS | 40.0% |
| !! | GTCATTTTATATGGGGAACC+TGG | + | chr7.3:12885619-12885638 | MS.gene09870:CDS | 40.0% |
| !! | TCTAAGGTTGATGATCTTCG+TGG | + | chr7.3:12884220-12884239 | MS.gene09870:CDS | 40.0% |
| !!! | CGTCTCCTAGTTTTGATATC+AGG | - | chr7.3:12886987-12887006 | None:intergenic | 40.0% |
| !!! | CTAGTTTTGATATCAGGGAG+AGG | - | chr7.3:12886981-12887000 | None:intergenic | 40.0% |
| !!! | GACCCATGCTGATTTTAAGA+AGG | + | chr7.3:12888867-12888886 | MS.gene09870:CDS | 40.0% |
| !!! | TGGTGTGTTTTTTAACCGCA+AGG | + | chr7.3:12888680-12888699 | MS.gene09870:intron | 40.0% |
| AAAGCCAAAACACTCGGCAA+AGG | - | chr7.3:12887817-12887836 | None:intergenic | 45.0% | |
| AAGCCAAAACACTCGGCAAA+GGG | - | chr7.3:12887816-12887835 | None:intergenic | 45.0% | |
| AGCAGTGTGTTGTACCTAGA+AGG | - | chr7.3:12887997-12888016 | None:intergenic | 45.0% | |
| ATCGTTGACCATTCATGTCC+TGG | + | chr7.3:12888297-12888316 | MS.gene09870:intron | 45.0% | |
| CGGAAAGACACTTCTTGCAA+AGG | + | chr7.3:12885645-12885664 | MS.gene09870:CDS | 45.0% | |
| CTTTCTTTGCTTTCAGGCTG+TGG | + | chr7.3:12886459-12886478 | MS.gene09870:intron | 45.0% | |
| GAGATGGTCCAAAACTTGTG+AGG | + | chr7.3:12886545-12886564 | MS.gene09870:CDS | 45.0% | |
| GAGGCCATTTAACCCAAGAT+TGG | - | chr7.3:12885900-12885919 | None:intergenic | 45.0% | |
| GAGTTGCTGAACCAGTTAGA+TGG | + | chr7.3:12886849-12886868 | MS.gene09870:CDS | 45.0% | |
| GATAAGGATCAGTTGGAACC+TGG | + | chr7.3:12884349-12884368 | MS.gene09870:CDS | 45.0% | |
| GCAACATTCTTGCGTGTTGT+TGG | + | chr7.3:12886496-12886515 | MS.gene09870:CDS | 45.0% | |
| GCAAGAGAAAAAAGGGTTGC+TGG | - | chr7.3:12888062-12888081 | None:intergenic | 45.0% | |
| GCAGTGTGTTGTACCTAGAA+GGG | - | chr7.3:12887996-12888015 | None:intergenic | 45.0% | |
| GGATTGCATCGAAACAGAGA+AGG | - | chr7.3:12887975-12887994 | None:intergenic | 45.0% | |
| GTCCAACAACAGAAAGAACC+TGG | - | chr7.3:12885420-12885439 | None:intergenic | 45.0% | |
| GTTTCGATGCAATCCCTTCT+AGG | + | chr7.3:12887980-12887999 | MS.gene09870:intron | 45.0% | |
| TAAGACCAGGTCGAATAGAC+AGG | + | chr7.3:12886943-12886962 | MS.gene09870:CDS | 45.0% | |
| TCGTTGACCATTCATGTCCT+GGG | + | chr7.3:12888298-12888317 | MS.gene09870:intron | 45.0% | |
| TGCATCAAAATAGCGCAACC+AGG | - | chr7.3:12884370-12884389 | None:intergenic | 45.0% | |
| TGGCCAAAAAGCTGATCATG+TGG | + | chr7.3:12887324-12887343 | MS.gene09870:intron | 45.0% | |
| TGGGAAACCTCGTGTATGTT+TGG | + | chr7.3:12884555-12884574 | MS.gene09870:intron | 45.0% | |
| TGGGCAAAGCCAGAAAATTC+AGG | - | chr7.3:12888042-12888061 | None:intergenic | 45.0% | |
| TGGTTTAGATGCCCAGATAC+AGG | + | chr7.3:12885519-12885538 | MS.gene09870:CDS | 45.0% | |
| TGTGTGTTTGACAGGGCTAT+TGG | + | chr7.3:12885678-12885697 | MS.gene09870:intron | 45.0% | |
| TTATATGGGGAACCTGGAAC+CGG | + | chr7.3:12885625-12885644 | MS.gene09870:CDS | 45.0% | |
| TTGACGCTGTTGGTACAAAG+AGG | + | chr7.3:12886623-12886642 | MS.gene09870:CDS | 45.0% | |
| TTTACGAGAACGCCGAATGA+AGG | + | chr7.3:12887238-12887257 | MS.gene09870:CDS | 45.0% | |
| ! | ATGATGCTTGGCTCTTTACC+AGG | + | chr7.3:12885399-12885418 | MS.gene09870:intron | 45.0% |
| ! | GAAGACACTGACTAGGTAGT+AGG | - | chr7.3:12886167-12886186 | None:intergenic | 45.0% |
| ! | GCGTGAGCTTTAATGCATTG+GGG | + | chr7.3:12888237-12888256 | MS.gene09870:intron | 45.0% |
| ! | GTGGAGAGCGTGAAATTCAA+AGG | + | chr7.3:12886817-12886836 | MS.gene09870:CDS | 45.0% |
| ! | GTGTTCCGTGTTTTCTGACA+CGG | + | chr7.3:12888203-12888222 | MS.gene09870:intron | 45.0% |
| ! | GTTGGACCGGAGTATTATGT+TGG | + | chr7.3:12884310-12884329 | MS.gene09870:CDS | 45.0% |
| !! | TGTTTCAAGTTCGGTTGGAC+CGG | + | chr7.3:12884297-12884316 | MS.gene09870:CDS | 45.0% |
| !! | TTCGATAACGGAGTTACCGT+CGG | - | chr7.3:12884082-12884101 | None:intergenic | 45.0% |
| !!! | GCATTTTGTTTTGGGCGTAG+GGG | + | chr7.3:12886707-12886726 | MS.gene09870:intron | 45.0% |
| !!! | GGCATTTTGTTTTGGGCGTA+GGG | + | chr7.3:12886706-12886725 | MS.gene09870:intron | 45.0% |
| !!! | TGGCATTTTGTTTTGGGCGT+AGG | + | chr7.3:12886705-12886724 | MS.gene09870:intron | 45.0% |
| !! | AAAAAAAAAAAAAAAATCAA+TGG | - | chr7.3:12888388-12888407 | None:intergenic | 5.0% |
| !! | AAAAAAAAAAAATATTAGAA+TGG | + | chr7.3:12888607-12888626 | MS.gene09870:intron | 5.0% |
| !!! | AAAAGTTTTTATAAAATTTT+GGG | + | chr7.3:12884612-12884631 | MS.gene09870:intron | 5.0% |
| ACCAGACGGCAACGACAAAA+AGG | + | chr7.3:12883970-12883989 | MS.gene09870:CDS | 50.0% | |
| ACTCGGCAAAGGGAGTTATG+AGG | - | chr7.3:12887806-12887825 | None:intergenic | 50.0% | |
| AGGGTCCGTGTCAGAAAACA+CGG | - | chr7.3:12888211-12888230 | None:intergenic | 50.0% | |
| AGGTACAACACACTGCTTGC+AGG | + | chr7.3:12888000-12888019 | MS.gene09870:intron | 50.0% | |
| AGGTATGATGCTCACTCAGG+TGG | + | chr7.3:12886798-12886817 | MS.gene09870:intron | 50.0% | |
| AGTCAGTGTCTTCCCCATAC+CGG | + | chr7.3:12886174-12886193 | MS.gene09870:intron | 50.0% | |
| CGTAGTTCAGCTCTTCTCGT+TGG | + | chr7.3:12887732-12887751 | MS.gene09870:intron | 50.0% | |
| CTGGTTCAGCAACTCCAACA+TGG | - | chr7.3:12886844-12886863 | None:intergenic | 50.0% | |
| GAAGGTTGAGAAGGCTCCTT+TGG | + | chr7.3:12885477-12885496 | MS.gene09870:CDS | 50.0% | |
| GAGTGAGCATCATACCTGCA+TGG | - | chr7.3:12886795-12886814 | None:intergenic | 50.0% | |
| GCGAAAACAAAAGGGTTCCG+AGG | + | chr7.3:12884042-12884061 | MS.gene09870:CDS | 50.0% | |
| GTCTTAGCAGAGCTGGATCA+AGG | - | chr7.3:12886929-12886948 | None:intergenic | 50.0% | |
| TCAGGAAAGGTTGAAGCCTC+AGG | + | chr7.3:12884174-12884193 | MS.gene09870:CDS | 50.0% | |
| TCTTCAGCTTTCTCCTCCTG+AGG | - | chr7.3:12884193-12884212 | None:intergenic | 50.0% | |
| TGCAGGTATGATGCTCACTC+AGG | + | chr7.3:12886795-12886814 | MS.gene09870:intron | 50.0% | |
| TTATGAGGCAGCTGCAGGAT+GGG | - | chr7.3:12887791-12887810 | None:intergenic | 50.0% | |
| ! | ACTCCCTTTGCCGAGTGTTT+TGG | + | chr7.3:12887810-12887829 | MS.gene09870:intron | 50.0% |
| ! | ACTGCTTGCAGGCATTGTTC+TGG | + | chr7.3:12888011-12888030 | MS.gene09870:intron | 50.0% |
| ! | AGGAGACGCATTTTCACGGT+AGG | + | chr7.3:12886999-12887018 | MS.gene09870:intron | 50.0% |
| ! | CTGGCCTAGCCTGAATTTTC+TGG | + | chr7.3:12888030-12888049 | MS.gene09870:intron | 50.0% |
| ! | GTATGGGGAAGACACTGACT+AGG | - | chr7.3:12886174-12886193 | None:intergenic | 50.0% |
| ! | TCCTTTTTGTCGTTGCCGTC+TGG | - | chr7.3:12883974-12883993 | None:intergenic | 50.0% |
| !! | AAGAAAGAAGGGGTGCCTGA+AGG | + | chr7.3:12888913-12888932 | MS.gene09870:CDS | 50.0% |
| !! | AGAAGTGTCTTTCCGGTTCC+AGG | - | chr7.3:12885640-12885659 | None:intergenic | 50.0% |
| ACTGGCGGTGACTGTTTCAC+TGG | + | chr7.3:12888660-12888679 | MS.gene09870:intron | 55.0% | |
| ATGGGTCAAGGAACACCAGG+AGG | + | chr7.3:12883917-12883936 | MS.gene09870:CDS | 55.0% | |
| CGTGGTTCGCCTATGAGTGT+TGG | + | chr7.3:12884238-12884257 | MS.gene09870:CDS | 55.0% | |
| GATCCAGCTCTGCTAAGACC+AGG | + | chr7.3:12886930-12886949 | MS.gene09870:CDS | 55.0% | |
| GGAAAGGTTGAAGCCTCAGG+AGG | + | chr7.3:12884177-12884196 | MS.gene09870:CDS | 55.0% | |
| GTTATGAGGCAGCTGCAGGA+TGG | - | chr7.3:12887792-12887811 | None:intergenic | 55.0% | |
| ! | TGTCGTTGCCGTCTGGTTTC+CGG | - | chr7.3:12883967-12883986 | None:intergenic | 55.0% |
| !! | TTTTGGGCGTAGGGGTGTGT+GGG | + | chr7.3:12886715-12886734 | MS.gene09870:intron | 55.0% |
| AGGCGGTTTGAACCGGCAAC+CGG | + | chr7.3:12883937-12883956 | MS.gene09870:CDS | 60.0% | |
| CACCAGGAGGCGGTTTGAAC+CGG | + | chr7.3:12883930-12883949 | MS.gene09870:CDS | 60.0% | |
| GGGAGTTATGAGGCAGCTGC+AGG | - | chr7.3:12887796-12887815 | None:intergenic | 60.0% | |
| GGTCAAGGAACACCAGGAGG+CGG | + | chr7.3:12883920-12883939 | MS.gene09870:CDS | 60.0% | |
| ! | GTAGGGGTGTGTGGGAACAG+TGG | + | chr7.3:12886723-12886742 | MS.gene09870:intron | 60.0% |
| !! | CGACCTGGTCTTAGCAGAGC+TGG | - | chr7.3:12886936-12886955 | None:intergenic | 60.0% |
| !! | GTTTTGGGCGTAGGGGTGTG+TGG | + | chr7.3:12886714-12886733 | MS.gene09870:intron | 60.0% |
| ATTCGAACCGGCCGCACCAC+CGG | + | chr7.3:12884000-12884019 | MS.gene09870:CDS | 65.0% | |
| CCGGGTGACCGGAAACCAGA+CGG | + | chr7.3:12883956-12883975 | MS.gene09870:CDS | 65.0% | |
| GGCAGCTGCAGGATGGGTCA+CGG | - | chr7.3:12887785-12887804 | None:intergenic | 65.0% | |
| GGCGGTTTGAACCGGCAACC+GGG | + | chr7.3:12883938-12883957 | MS.gene09870:CDS | 65.0% | |
| GGGGTGTGTGGGAACAGTGG+AGG | + | chr7.3:12886726-12886745 | MS.gene09870:intron | 65.0% | |
| GTTTCCGGTCACCCGGTTGC+CGG | - | chr7.3:12883952-12883971 | None:intergenic | 65.0% | |
| TGAACCGGCAACCGGGTGAC+CGG | + | chr7.3:12883945-12883964 | MS.gene09870:CDS | 65.0% | |
| TGTTTGCGACCGACGCGAGC+CGG | - | chr7.3:12884022-12884041 | None:intergenic | 65.0% | |
| ! | CCGTCTGGTTTCCGGTCACC+CGG | - | chr7.3:12883959-12883978 | None:intergenic | 65.0% |
| !! | TGCCGGTTCAAACCGCCTCC+TGG | - | chr7.3:12883935-12883954 | None:intergenic | 65.0% |
| AGGGTTCCGAGGCTGCGTCG+CGG | + | chr7.3:12884053-12884072 | MS.gene09870:CDS | 70.0% | |
| ACCGACGCGAGCCGGTGGTG+CGG | - | chr7.3:12884014-12884033 | None:intergenic | 75.0% | |
| CGGCAACCGCGACGCAGCCT+CGG | - | chr7.3:12884062-12884081 | None:intergenic | 75.0% | |
| GGCTGCGTCGCGGTTGCCGA+CGG | + | chr7.3:12884063-12884082 | MS.gene09870:CDS | 75.0% | |
| TTGCGACCGACGCGAGCCGG+TGG | - | chr7.3:12884019-12884038 | None:intergenic | 75.0% | |
| ! | ACGCGAGCCGGTGGTGCGGC+CGG | - | chr7.3:12884010-12884029 | None:intergenic | 80.0% |
| !!! | GCCGCACCACCGGCTCGCGT+CGG | + | chr7.3:12884010-12884029 | MS.gene09870:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 12883917 | 12888948 | 12883917 | ID=MS.gene09870 |
| chr7.3 | mRNA | 12883917 | 12888948 | 12883917 | ID=MS.gene09870.t1;Parent=MS.gene09870 |
| chr7.3 | exon | 12883917 | 12884396 | 12883917 | ID=MS.gene09870.t1.exon1;Parent=MS.gene09870.t1 |
| chr7.3 | CDS | 12883917 | 12884396 | 12883917 | ID=cds.MS.gene09870.t1;Parent=MS.gene09870.t1 |
| chr7.3 | exon | 12885421 | 12885666 | 12885421 | ID=MS.gene09870.t1.exon2;Parent=MS.gene09870.t1 |
| chr7.3 | CDS | 12885421 | 12885666 | 12885421 | ID=cds.MS.gene09870.t1;Parent=MS.gene09870.t1 |
| chr7.3 | exon | 12886475 | 12886644 | 12886475 | ID=MS.gene09870.t1.exon3;Parent=MS.gene09870.t1 |
| chr7.3 | CDS | 12886475 | 12886644 | 12886475 | ID=cds.MS.gene09870.t1;Parent=MS.gene09870.t1 |
| chr7.3 | exon | 12886800 | 12887016 | 12886800 | ID=MS.gene09870.t1.exon4;Parent=MS.gene09870.t1 |
| chr7.3 | CDS | 12886800 | 12887016 | 12886800 | ID=cds.MS.gene09870.t1;Parent=MS.gene09870.t1 |
| chr7.3 | exon | 12887119 | 12887259 | 12887119 | ID=MS.gene09870.t1.exon5;Parent=MS.gene09870.t1 |
| chr7.3 | CDS | 12887119 | 12887259 | 12887119 | ID=cds.MS.gene09870.t1;Parent=MS.gene09870.t1 |
| chr7.3 | exon | 12888865 | 12888948 | 12888865 | ID=MS.gene09870.t1.exon6;Parent=MS.gene09870.t1 |
| chr7.3 | CDS | 12888865 | 12888948 | 12888865 | ID=cds.MS.gene09870.t1;Parent=MS.gene09870.t1 |
| Gene Sequence |
| Protein sequence |
