AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene39530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene39530.t1 MTR_4g088210 96.234 717 17 5 1 712 1 712 0.0 1415
MS.gene39530.t1 MTR_4g088210 96.148 701 17 5 1 696 1 696 0.0 1382
MS.gene39530.t1 MTR_2g014770 65.022 689 193 18 2 651 1 680 0.0 823
MS.gene39530.t1 MTR_2g014770 76.286 447 90 4 2 435 1 444 0.0 686
MS.gene39530.t1 MTR_2g014770 39.713 209 97 12 467 651 408 611 5.97e-23 104
MS.gene39530.t1 MTR_2g093740 42.434 641 332 14 41 659 55 680 8.97e-151 454
MS.gene39530.t1 MTR_2g093740 42.434 641 332 14 41 659 55 680 8.08e-150 454
MS.gene39530.t1 MTR_2g093740 42.434 641 332 14 41 659 55 680 1.60e-149 455
MS.gene39530.t1 MTR_4g060460 51.340 485 199 9 41 503 53 522 4.86e-149 453
MS.gene39530.t1 MTR_4g060460 51.429 490 196 11 41 503 53 527 3.17e-148 451
MS.gene39530.t1 MTR_2g093740 41.590 654 332 15 41 659 55 693 4.89e-147 446
MS.gene39530.t1 MTR_2g093740 41.590 654 332 15 41 659 55 693 5.13e-146 444
MS.gene39530.t1 MTR_2g093740 41.590 654 332 15 41 659 55 693 1.08e-145 446
MS.gene39530.t1 MTR_8g100050 47.196 428 197 5 17 433 41 450 2.04e-126 392
MS.gene39530.t1 MTR_8g100050 47.196 428 197 5 17 433 41 450 3.51e-125 392
MS.gene39530.t1 MTR_2g005240 48.354 395 178 6 21 404 2 381 5.94e-118 369
MS.gene39530.t1 MTR_2g093740 40.580 552 302 12 125 659 8 550 4.11e-116 362
MS.gene39530.t1 MTR_2g093740 40.580 552 302 12 125 659 8 550 7.41e-116 363
MS.gene39530.t1 MTR_4g021580 44.954 436 204 11 42 465 19 430 2.53e-113 355
MS.gene39530.t1 MTR_4g021580 44.954 436 204 11 42 465 19 430 8.74e-113 355
MS.gene39530.t1 MTR_2g093740 39.646 565 302 13 125 659 8 563 1.92e-112 353
MS.gene39530.t1 MTR_2g093740 39.646 565 302 13 125 659 8 563 6.48e-112 353
MS.gene39530.t1 MTR_5g076270 48.031 381 166 6 32 396 12 376 2.84e-109 351
MS.gene39530.t1 MTR_2g018690 49.206 378 159 8 42 403 23 383 3.35e-109 352
MS.gene39530.t1 MTR_8g027440 49.180 366 162 9 42 399 29 378 3.11e-108 343
MS.gene39530.t1 MTR_3g064050 48.257 373 161 6 40 396 22 378 2.09e-106 343
MS.gene39530.t1 MTR_8g079492 47.745 377 165 8 42 403 23 382 3.82e-106 344
MS.gene39530.t1 MTR_8g079492 47.745 377 165 8 42 403 23 382 3.86e-106 344
MS.gene39530.t1 MTR_4g124900 48.760 363 164 6 26 379 7 356 5.09e-106 348
MS.gene39530.t1 MTR_4g124900 48.760 363 164 6 26 379 7 356 8.27e-106 348
MS.gene39530.t1 MTR_2g043250 49.176 364 165 5 24 379 5 356 1.98e-105 347
MS.gene39530.t1 MTR_7g062540 42.925 424 205 9 31 442 3 401 8.37e-105 335
MS.gene39530.t1 MTR_8g101360 46.410 390 165 8 9 379 2 366 4.69e-102 337
MS.gene39530.t1 MTR_1g024025 47.568 370 160 7 42 396 43 393 2.13e-101 338
MS.gene39530.t1 MTR_8g079492 49.359 312 142 6 96 403 1 300 1.07e-88 296
MS.gene39530.t1 MTR_2g094570 41.316 380 165 9 42 378 11 375 4.01e-84 280
MS.gene39530.t1 MTR_2g094570 41.316 380 165 9 42 378 11 375 4.56e-84 280
MS.gene39530.t1 MTR_2g094570 41.316 380 165 9 42 378 67 431 1.28e-83 280
MS.gene39530.t1 MTR_1g064430 34.381 541 270 18 40 507 23 551 1.84e-79 268
MS.gene39530.t1 MTR_1g094960 40.157 381 179 10 37 378 12 382 1.96e-79 266
MS.gene39530.t1 MTR_1g064430 34.381 541 270 18 40 507 36 564 2.66e-79 268
MS.gene39530.t1 MTR_8g446900 39.296 341 181 5 82 420 7 323 1.96e-75 248
MS.gene39530.t1 MTR_4g058930 39.005 382 177 7 42 378 12 382 3.41e-75 256
MS.gene39530.t1 MTR_4g058930 39.005 382 177 7 42 378 12 382 6.62e-75 256
MS.gene39530.t1 MTR_7g101280 37.596 391 183 12 38 378 27 406 4.28e-71 244
MS.gene39530.t1 MTR_0041s0110 37.596 391 183 12 38 378 27 406 4.28e-71 244
MS.gene39530.t1 MTR_7g101275 40.000 310 172 6 51 357 1 299 4.37e-65 221
MS.gene39530.t1 MTR_3g073420 35.980 403 204 9 35 398 12 399 1.50e-62 219
MS.gene39530.t1 MTR_5g040880 35.652 345 190 8 42 378 11 331 2.51e-61 214
MS.gene39530.t1 MTR_5g061220 33.693 371 190 11 42 378 19 367 5.63e-58 205
MS.gene39530.t1 MTR_2g024430 33.086 405 234 10 28 422 6 383 3.49e-57 203
MS.gene39530.t1 MTR_0041s0120 36.970 330 166 10 51 357 1 311 2.95e-55 195
MS.gene39530.t1 MTR_1g058210 30.347 346 213 8 42 378 12 338 3.65e-48 176
MS.gene39530.t1 MTR_5g040740 32.727 330 185 9 42 360 12 315 3.29e-47 172
MS.gene39530.t1 MTR_5g082140 32.174 345 206 9 42 378 12 336 3.11e-46 171
MS.gene39530.t1 MTR_2g006270 31.549 355 204 10 37 378 8 336 2.48e-42 160
MS.gene39530.t1 MTR_5g460920 29.201 363 218 12 42 388 12 351 6.80e-38 146
MS.gene39530.t1 MTR_5g060780 29.201 363 218 12 42 388 12 351 7.00e-38 146
MS.gene39530.t1 MTR_2g006380 30.168 358 200 14 37 378 15 338 3.94e-37 145
MS.gene39530.t1 MTR_5g060630 29.600 375 226 12 42 384 12 380 5.13e-37 146
MS.gene39530.t1 MTR_5g460740 29.600 375 226 12 42 384 12 380 5.13e-37 146
MS.gene39530.t1 MTR_5g061890 29.201 363 218 12 42 388 12 351 1.67e-35 139
MS.gene39530.t1 MTR_5g062970 33.906 233 114 5 30 246 26 234 8.42e-34 130
MS.gene39530.t1 MTR_3g064050 43.478 138 76 2 261 396 4 141 1.69e-26 115
MS.gene39530.t1 MTR_5g074840 47.253 91 48 0 212 302 58 148 2.76e-17 80.1
MS.gene39530.t1 MTR_5g032260 32.370 173 98 4 275 431 50 219 1.70e-14 76.6
MS.gene39530.t1 MTR_7g117455 40.217 92 54 1 148 239 116 206 3.54e-12 69.7
MS.gene39530.t1 MTR_8g023990 40.206 97 56 2 148 244 170 264 5.92e-12 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene39530.t1 AT2G33860 56.840 519 179 7 1 506 1 487 0.0 575
MS.gene39530.t1 AT5G60450 42.515 668 294 19 31 662 30 643 3.60e-144 440
MS.gene39530.t1 AT5G60450 42.618 657 287 19 42 662 65 667 1.89e-141 434
MS.gene39530.t1 AT2G33860 57.660 359 122 2 149 506 1 330 6.79e-140 418
MS.gene39530.t1 AT5G62000 44.884 430 209 5 18 433 37 452 2.44e-122 386
MS.gene39530.t1 AT5G62000 44.884 430 209 5 18 433 37 452 2.44e-122 386
MS.gene39530.t1 AT5G62000 44.884 430 209 5 18 433 37 452 2.44e-122 386
MS.gene39530.t1 AT5G62000 44.884 430 209 5 18 433 37 452 2.44e-122 386
MS.gene39530.t1 AT5G62000 44.884 430 209 5 18 433 37 452 3.78e-122 385
MS.gene39530.t1 AT1G59750 47.781 383 166 6 19 388 2 363 1.70e-113 357
MS.gene39530.t1 AT1G59750 47.781 383 166 6 19 388 2 363 1.95e-113 357
MS.gene39530.t1 AT1G59750 47.781 383 166 6 19 388 2 363 2.73e-113 357
MS.gene39530.t1 AT1G59750 47.781 383 166 6 19 388 2 363 2.73e-113 357
MS.gene39530.t1 AT2G46530 47.059 374 160 9 30 386 27 379 4.01e-107 339
MS.gene39530.t1 AT2G46530 47.632 359 153 8 42 386 21 358 7.17e-107 338
MS.gene39530.t1 AT4G23980 47.159 352 164 5 36 379 6 343 3.89e-106 337
MS.gene39530.t1 AT4G23980 47.159 352 164 5 36 379 6 343 4.10e-106 337
MS.gene39530.t1 AT1G19220 49.451 364 164 5 24 379 5 356 4.60e-106 348
MS.gene39530.t1 AT3G61830 45.288 382 177 7 42 409 25 388 1.15e-105 335
MS.gene39530.t1 AT5G37020 46.056 393 173 8 21 396 4 374 1.54e-105 339
MS.gene39530.t1 AT1G30330 48.541 377 163 6 42 403 25 385 3.87e-105 342
MS.gene39530.t1 AT1G30330 48.541 377 163 6 42 403 25 385 3.87e-105 342
MS.gene39530.t1 AT1G30330 48.541 377 163 6 42 403 23 383 3.92e-105 342
MS.gene39530.t1 AT5G37020 46.056 393 173 8 21 396 4 374 5.60e-105 339
MS.gene39530.t1 AT1G19850 49.292 353 145 8 42 378 43 377 7.69e-103 335
MS.gene39530.t1 AT1G19850 49.292 353 145 8 42 378 54 388 1.10e-102 335
MS.gene39530.t1 AT5G20730 48.588 354 162 5 34 379 16 357 8.64e-101 335
MS.gene39530.t1 AT5G20730 48.451 355 162 6 34 379 16 358 3.47e-99 330
MS.gene39530.t1 AT5G20730 48.451 355 162 6 34 379 16 358 3.86e-99 330
MS.gene39530.t1 AT3G61830 46.687 332 158 5 82 409 21 337 1.25e-93 301
MS.gene39530.t1 AT1G35540 42.507 367 168 8 28 378 13 352 3.89e-91 296
MS.gene39530.t1 AT1G35240 43.213 361 174 8 28 378 13 352 1.06e-90 295
MS.gene39530.t1 AT1G34170 41.463 369 186 7 42 401 25 372 5.55e-90 290
MS.gene39530.t1 AT1G34410 35.769 520 271 16 28 525 13 491 1.27e-89 293
MS.gene39530.t1 AT1G34390 42.936 361 173 9 28 378 13 350 1.18e-88 290
MS.gene39530.t1 AT1G34310 42.105 361 178 8 28 378 13 352 6.45e-87 285
MS.gene39530.t1 AT1G35520 42.655 354 172 8 35 378 20 352 2.65e-86 283
MS.gene39530.t1 AT2G46530 54.622 238 104 3 150 386 37 271 1.33e-83 274
MS.gene39530.t1 AT5G37020 53.815 249 113 2 150 396 31 279 2.77e-82 276
MS.gene39530.t1 AT2G28350 38.200 411 200 8 42 409 10 409 3.15e-81 272
MS.gene39530.t1 AT2G28350 38.200 411 200 8 42 409 10 409 4.24e-81 272
MS.gene39530.t1 AT4G30080 40.323 372 180 7 42 378 19 383 3.88e-78 264
MS.gene39530.t1 AT1G34170 38.482 369 171 7 42 401 25 346 1.17e-77 257
MS.gene39530.t1 AT1G34170 38.482 369 171 7 42 401 25 346 7.78e-77 257
MS.gene39530.t1 AT1G77850 33.499 403 212 8 43 411 20 400 2.51e-62 219
MS.gene39530.t1 AT1G77850 33.499 403 212 8 43 411 20 400 3.06e-62 219
MS.gene39530.t1 AT1G43950 43.421 228 105 6 28 249 13 222 6.86e-52 179
MS.gene39530.t1 AT2G46870 33.835 133 82 2 135 262 20 151 1.21e-13 72.8
MS.gene39530.t1 AT1G01030 40.217 92 54 1 148 239 54 144 4.99e-13 71.2
MS.gene39530.t1 AT1G01030 40.217 92 54 1 148 239 54 144 6.25e-13 71.2
MS.gene39530.t1 AT4G01500 39.130 92 53 1 148 239 34 122 8.23e-13 70.9
MS.gene39530.t1 AT3G25730 31.944 144 81 5 116 248 146 283 2.07e-11 66.6
MS.gene39530.t1 AT1G68840 34.127 126 78 3 127 248 163 287 8.19e-11 64.7
MS.gene39530.t1 AT1G68840 34.127 126 78 3 127 248 163 287 8.19e-11 64.7

Find 191 sgRNAs with CRISPR-Local

Find 341 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGCATTAACTATGTCTTTA+AGG 0.125975 4.2:+23117944 None:intergenic
CTTGACCTTGCAAGACCTTC+TGG 0.208058 4.2:+23116104 None:intergenic
ACAAGTCTCACCTCACTTTC+AGG 0.212334 4.2:+23119102 None:intergenic
CTTGACCTTGCAAGACCTTC+TGG 0.215232 4.2:+23115897 None:intergenic
TTCATCAAAGCTAGAGTTTC+CGG 0.216516 4.2:-23116269 MS.gene39530:CDS
GGTGCTGTTGGTTCTGGTTC+TGG 0.228992 4.2:-23119720 MS.gene39530:CDS
ACAACAACACTTCCTTTCTT+TGG 0.242841 4.2:+23119642 None:intergenic
AGATTCACGGGACTAATTAT+TGG 0.295962 4.2:-23117567 MS.gene39530:CDS
TTCTGGTTCTTCTGTTTGTT+TGG 0.296671 4.2:-23119703 MS.gene39530:CDS
ATTCCTCTAACAGGTAGAAT+TGG 0.305603 4.2:-23116157 MS.gene39530:intron
CTGCCTCAACGCCAACTAAT+AGG 0.307928 4.2:-23115604 MS.gene39530:CDS
AGTGTTGGTGCTGTTGGTTC+TGG 0.317923 4.2:-23119726 MS.gene39530:CDS
GACCATCCATTTGTGGATCT+TGG 0.321293 4.2:+23115779 None:intergenic
CTTCTGTTTGTTTGGAGCTA+TGG 0.324256 4.2:-23119695 MS.gene39530:CDS
GAATTGGGACATCAGACTTT+GGG 0.338470 4.2:-23116141 MS.gene39530:CDS
TGAGCTAGCCCGCGGAAAAT+AGG 0.340511 4.2:+23115581 None:intergenic
GATGTTTCCTGCAATGGCTT+TGG 0.342344 4.2:-23115935 MS.gene39530:CDS
GGCTACCAAGATTCAATTGC+TGG 0.343727 4.2:+23117965 None:intergenic
AATCCATGGTTGACGCTTGC+TGG 0.351834 4.2:+23115708 None:intergenic
ACTCAGTTGGAATGAGGTTC+AGG 0.363746 4.2:-23117701 MS.gene39530:CDS
AACAAGAAGAAACTTGTATC+TGG 0.365188 4.2:-23118178 MS.gene39530:CDS
TTTGATCCAGGCCATCTAAC+AGG 0.365768 4.2:+23117528 None:intergenic
ACCTCTGTAATTCAGATAAC+TGG 0.374442 4.2:+23116029 None:intergenic
TGGTACACATTCACGCGATT+TGG 0.374841 4.2:-23115540 MS.gene39530:CDS
CAAGGCTCTTTAAGAATTTG+TGG 0.377814 4.2:+23117733 None:intergenic
TTAGATGGCCTGGATCAAAA+TGG 0.391526 4.2:-23117524 MS.gene39530:CDS
TGGAAGCTTCAAGGCTCAAC+AGG 0.392327 4.2:-23116384 MS.gene39530:CDS
AGAAGATGGCGAATTGAGAT+TGG 0.400560 4.2:-23118043 MS.gene39530:CDS
ACAGAAAAGGCTTGTCCATA+TGG 0.405325 4.2:+23115857 None:intergenic
GTCAACGAGGCTTGTAGAAA+TGG 0.411503 4.2:-23115836 MS.gene39530:CDS
ACGGCCAGGAATGGAAATTT+CGG 0.412988 4.2:-23118359 MS.gene39530:CDS
GCTTGTAGAAATGGTCGCTT+TGG 0.413112 4.2:-23115827 MS.gene39530:CDS
CGAAGATTGCTTTCCTCCCC+TGG 0.414436 4.2:-23118579 MS.gene39530:intron
AGGGAGGTCCAGGATTTATC+TGG 0.416845 4.2:+23115393 None:intergenic
TTCTTTGGCAAAGAGATCAT+AGG 0.418004 4.2:+23119657 None:intergenic
TTCCACCACCAATAGCTTGA+TGG 0.422972 4.2:-23116326 MS.gene39530:CDS
TTCTGCATCTTTATTTGCAA+TGG 0.425772 4.2:+23115433 None:intergenic
GAGGAAGATGAAACACCTTC+TGG 0.428874 4.2:-23119774 MS.gene39530:CDS
ACTAGTTGCCATCAAGCTAT+TGG 0.429653 4.2:+23116318 None:intergenic
GTTTCCTGTTGAAGCGATCC+CGG 0.430395 4.2:+23115985 None:intergenic
GAGCTATGGCATGCTTGTGC+TGG 0.433793 4.2:-23119681 MS.gene39530:CDS
TCTGCATCTTTATTTGCAAT+GGG 0.433846 4.2:+23115434 None:intergenic
GTGGATCCTGTTAGATGGCC+TGG 0.434675 4.2:-23117534 MS.gene39530:CDS
CTTGTGAAGGAGGGAGGTCC+AGG 0.435662 4.2:+23115383 None:intergenic
TATGCCGAAATTTCCATTCC+TGG 0.436283 4.2:+23118355 None:intergenic
AGGATGAATATTGCTTACTT+TGG 0.437294 4.2:+23115295 None:intergenic
CATAGAACGAACCTCTTTGA+AGG 0.445028 4.2:+23115651 None:intergenic
TTGAGGGAAGGGGTAATTGA+TGG 0.447627 4.2:-23118731 MS.gene39530:CDS
CTTGCAAGACCTTCTGGAAT+CGG 0.448674 4.2:+23115903 None:intergenic
AATTCTGATGTTTCCTGCAA+TGG 0.460396 4.2:-23115941 MS.gene39530:CDS
AGATTCACCAAAGCCATTGC+AGG 0.460830 4.2:+23115928 None:intergenic
CTGAGAAGACCATCCATTTG+TGG 0.461406 4.2:+23115772 None:intergenic
GGTGTATTGTCAGGTGTTGT+TGG 0.462932 4.2:-23119127 MS.gene39530:CDS
TGTAAAAGTAGCTGTGTGTT+TGG 0.467241 4.2:-23115479 MS.gene39530:CDS
AGAATTGGGACATCAGACTT+TGG 0.468381 4.2:-23116142 MS.gene39530:CDS
GTCGTAAGCAAATGCCTTCG+TGG 0.468733 4.2:+23118220 None:intergenic
CTTGATTATTCTTACTCAGT+TGG 0.470525 4.2:-23117714 MS.gene39530:CDS
AAACATCAGAATTCATTTGT+GGG 0.471506 4.2:+23115951 None:intergenic
CATGAAGACATGAACTCGTT+TGG 0.472406 4.2:-23115560 MS.gene39530:CDS
TCCGGCCAGCAATTGAATCT+TGG 0.475283 4.2:-23117970 MS.gene39530:CDS
TATCCCGGGATCGCTTCAAC+AGG 0.477815 4.2:-23115989 MS.gene39530:CDS
TCATCTTCAAGTACAAGTAT+AGG 0.478694 4.2:-23119750 MS.gene39530:CDS
ATGATCTCTTTGCCAAAGAA+AGG 0.480251 4.2:-23119654 MS.gene39530:CDS
TTCCTCTAACAGGTAGAATT+GGG 0.480587 4.2:-23116156 MS.gene39530:intron
CTGATGTGGATCCTGTTAGA+TGG 0.481986 4.2:-23117539 MS.gene39530:CDS
TTTCCTGTTGAAGCGATCCC+GGG 0.482214 4.2:+23115986 None:intergenic
AAGATTCTCTTCACTATGAT+GGG 0.485635 4.2:-23119819 None:intergenic
AGTTTGAAGAGGACCAAGAC+TGG 0.486097 4.2:-23116298 MS.gene39530:CDS
ACAAGCCTCGTTGACAGAAA+AGG 0.486107 4.2:+23115844 None:intergenic
AATTGAGACATACTGGGAAC+CGG 0.486594 4.2:+23116250 None:intergenic
GAAACATCAGAATTCATTTG+TGG 0.487206 4.2:+23115950 None:intergenic
TTACTTCCCTCAAGGACACT+TGG 0.489214 4.2:-23119619 MS.gene39530:CDS
GGCAAAGGACCTGCACGGCC+AGG 0.491321 4.2:-23118373 MS.gene39530:CDS
ATACTTCCTAGCCAACCATA+TGG 0.494849 4.2:-23115872 MS.gene39530:CDS
CGAAGGCATTTGCTTACGAC+TGG 0.494928 4.2:-23118217 MS.gene39530:CDS
CTCATCATTTCAGGTAAGGT+GGG 0.495255 4.2:-23116413 MS.gene39530:intron
GATCCCGGGATAGGTTGAAC+CGG 0.495352 4.2:+23116000 None:intergenic
TTATAATAACAAAATTAATC+CGG 0.498479 4.2:-23115687 MS.gene39530:CDS
GTCACTTGCCAGATAAATCC+TGG 0.499622 4.2:-23115401 MS.gene39530:CDS
TGTTGAAGCGATCCCGGGAT+AGG 0.500591 4.2:+23115991 None:intergenic
GGGATGACATGGAAGCTTCA+AGG 0.501986 4.2:-23116393 MS.gene39530:CDS
TGATGAAGGCAATCCAGTCT+TGG 0.502883 4.2:+23116285 None:intergenic
ATTTGCAATGGGAGCACCCT+CGG 0.505296 4.2:+23115445 None:intergenic
ATTTCCATTCCTGGCCGTGC+AGG 0.505326 4.2:+23118364 None:intergenic
TTGCTCCGAAGTGAATGCCT+TGG 0.507472 4.2:+23115338 None:intergenic
CCATGGGAGATTGAGCCCTC+AGG 0.508458 4.2:-23116355 MS.gene39530:CDS
CAACTGAGTAAGAATAATCA+AGG 0.509968 4.2:+23117715 None:intergenic
TGAAGGACGTTATCCTCCAC+CGG 0.511378 4.2:+23115668 None:intergenic
ATAGGTAGTGTTGGTGCTGT+TGG 0.511774 4.2:-23119732 MS.gene39530:CDS
GAAGATGGCGAATTGAGATT+GGG 0.515498 4.2:-23118042 MS.gene39530:CDS
AGGACCTGCACGGCCAGGAA+TGG 0.516509 4.2:-23118368 MS.gene39530:CDS
ATTCTTACTCAGTTGGAATG+AGG 0.516705 4.2:-23117707 MS.gene39530:CDS
TGCCATCAAGCTATTGGTGG+TGG 0.517515 4.2:+23116324 None:intergenic
GAACGATGAGGTGTATTGTC+AGG 0.518104 4.2:-23119136 MS.gene39530:CDS
TTCACAAGAGCTTGTGGCAA+AGG 0.520697 4.2:-23118388 MS.gene39530:CDS
TATGCTTCTGAAATGAAAGA+TGG 0.522167 4.2:-23115632 MS.gene39530:CDS
CAGGGGAGGAAAGCAATCTT+CGG 0.526886 4.2:+23118580 None:intergenic
ACAATTGACAGAGGAGAAGA+TGG 0.526995 4.2:-23118057 MS.gene39530:intron
GCAAGTGCAACAAAAGTTGA+GGG 0.527829 4.2:-23118747 MS.gene39530:CDS
TCTCATCATTTCAGGTAAGG+TGG 0.529211 4.2:-23116414 MS.gene39530:intron
CATTTGTGGATCTTGGCACC+TGG 0.529771 4.2:+23115786 None:intergenic
TGCTGGTACATCAACACTGA+TGG 0.534225 4.2:+23115725 None:intergenic
TATCCCGGTTCAACCTATCC+CGG 0.534428 4.2:-23116004 MS.gene39530:CDS
GCTTGTCCATATGGTTGGCT+AGG 0.536411 4.2:+23115866 None:intergenic
GGCATTTGCTTACGACTGGA+TGG 0.537671 4.2:-23118213 MS.gene39530:CDS
GAGATGCTGTTCTGTTCCTC+CGG 0.539610 4.2:-23118156 MS.gene39530:intron
AATTGAGATTGGGAATCCGC+AGG 0.541630 4.2:-23118032 MS.gene39530:CDS
GATGTTCCAAGTGTCCTTGA+GGG 0.542111 4.2:+23119613 None:intergenic
CGATTCCAGAAGGTCTTGCA+AGG 0.542383 4.2:-23115902 MS.gene39530:CDS
AGCAAGTGCAACAAAAGTTG+AGG 0.542657 4.2:-23118748 MS.gene39530:CDS
TTCAACATGTCTTGTGAAGG+AGG 0.544875 4.2:+23115373 None:intergenic
GCTCAACAGGGTTTCACCAT+GGG 0.545772 4.2:-23116371 MS.gene39530:CDS
GAATTACAGAGGTGCTATCC+CGG 0.550009 4.2:-23116019 MS.gene39530:CDS
GCTTCTGATACTAGCACTCA+TGG 0.551937 4.2:-23118629 MS.gene39530:CDS
AAAAGGCTTGTCCATATGGT+TGG 0.552881 4.2:+23115861 None:intergenic
CGGAAAATAGGCCTATTAGT+TGG 0.553897 4.2:+23115593 None:intergenic
ACAGAGAAGCGGTCAAGAGT+TGG 0.561254 4.2:-23115510 MS.gene39530:CDS
CTCTTTAAGAATTTGTGGAT+AGG 0.561415 4.2:+23117738 None:intergenic
TGCAACAAAAGTTGAGGGAA+GGG 0.561765 4.2:-23118742 MS.gene39530:CDS
TAAACGCAGGGCAGCCACGA+AGG 0.562505 4.2:-23118234 MS.gene39530:intron
TCAATCCAAGGCATTCACTT+CGG 0.563879 4.2:-23115343 MS.gene39530:CDS
ATCTGGCAAGTGACTGCAGA+GGG 0.565131 4.2:+23115410 None:intergenic
ATCCCGGTTCAACCTATCCC+GGG 0.568291 4.2:-23116003 MS.gene39530:CDS
TTGAAGATGATTTCAATCCA+AGG 0.568841 4.2:-23115355 MS.gene39530:CDS
TAAGAGTCTTGCAGAACATG+TGG 0.569128 4.2:+23118654 None:intergenic
TTTGCCACAAGCTCTTGTGA+AGG 0.570311 4.2:+23118390 None:intergenic
AGTACAAGTATAGGTAGTGT+TGG 0.571181 4.2:-23119741 MS.gene39530:CDS
TCAGGTAAGGTGGGATGACA+TGG 0.571901 4.2:-23116404 MS.gene39530:intron
CTGAAGATGCTGCAGAGCGA+AGG 0.573424 4.2:-23117665 MS.gene39530:intron
ACCAAGATTCAATTGCTGGC+CGG 0.574219 4.2:+23117969 None:intergenic
CAGGTGCCAAGATCCACAAA+TGG 0.574271 4.2:-23115785 MS.gene39530:CDS
ATCTTCAACATGTCTTGTGA+AGG 0.575530 4.2:+23115370 None:intergenic
GTTGTTGTTTACTTCCCTCA+AGG 0.575589 4.2:-23119627 MS.gene39530:CDS
GGAAACTCTAGCTTTGATGA+AGG 0.575774 4.2:+23116271 None:intergenic
TCGATAATCATGTCTCTCAC+AGG 0.575881 4.2:+23115275 None:intergenic
TAACAAAATTAATCCGGTGG+AGG 0.578416 4.2:-23115681 MS.gene39530:CDS
AAGGCATTCACTTCGGAGCA+AGG 0.579813 4.2:-23115336 MS.gene39530:CDS
GTAATTGATGGTGATGGTGA+TGG 0.584113 4.2:-23118719 MS.gene39530:CDS
CCTGAGGGCTCAATCTCCCA+TGG 0.586174 4.2:+23116355 None:intergenic
TGGATTGTAGTGTATGCTAA+AGG 0.587455 4.2:+23117906 None:intergenic
GTGCAACAAAAGTTGAGGGA+AGG 0.588950 4.2:-23118743 MS.gene39530:CDS
GCAACAAAAGTTGAGGGAAG+GGG 0.589038 4.2:-23118741 MS.gene39530:CDS
GGAATCACTGCGGTTCCAGA+AGG 0.590895 4.2:-23116119 MS.gene39530:CDS
GGCTCAACAGGGTTTCACCA+TGG 0.590908 4.2:-23116372 MS.gene39530:CDS
GATGGTGATGGTGATGGTGA+AGG 0.591326 4.2:-23118713 MS.gene39530:CDS
AGTTGCCATCAAGCTATTGG+TGG 0.596259 4.2:+23116321 None:intergenic
TAATAACAAAATTAATCCGG+TGG 0.596313 4.2:-23115684 MS.gene39530:CDS
AATTATTGGAATTACTGATG+TGG 0.597448 4.2:-23117553 MS.gene39530:CDS
AAGAGTCTTGCAGAACATGT+GGG 0.599354 4.2:+23118655 None:intergenic
TGAATCTTTCCGATTCCAGA+AGG 0.600033 4.2:-23115912 MS.gene39530:CDS
CAATCTTCGGCTGCTCGACG+AGG 0.600698 4.2:+23118593 None:intergenic
TTAGCATACACTACAATCCA+AGG 0.602455 4.2:-23117903 MS.gene39530:intron
AGATGTTCCAAGTGTCCTTG+AGG 0.604919 4.2:+23119612 None:intergenic
ACACGACAGAACACATGAGA+AGG 0.606315 4.2:+23119555 None:intergenic
GTATTTGTGCAGGCTGAGGA+AGG 0.606600 4.2:-23119159 MS.gene39530:intron
TGATGGCAACTAGTTTGAAG+AGG 0.608820 4.2:-23116309 MS.gene39530:CDS
TGCCAAGATCCACAAATGGA+TGG 0.610246 4.2:-23115781 MS.gene39530:CDS
ATCCCGGGATAGGTTGAACC+GGG 0.611784 4.2:+23116001 None:intergenic
CGGTTCCAGAAGGTCTTGCA+AGG 0.612560 4.2:-23116109 MS.gene39530:CDS
AGGCCTATTAGTTGGCGTTG+AGG 0.614103 4.2:+23115601 None:intergenic
AATTGGGACATCAGACTTTG+GGG 0.617990 4.2:-23116140 MS.gene39530:CDS
AAGACCTTCACAAGAGCTTG+TGG 0.618685 4.2:-23118394 MS.gene39530:CDS
ATTGAGATTGGGAATCCGCA+GGG 0.619618 4.2:-23118031 MS.gene39530:CDS
ACATGTCTTGTGAAGGAGGG+AGG 0.622871 4.2:+23115377 None:intergenic
TCAACATGTCTTGTGAAGGA+GGG 0.630253 4.2:+23115374 None:intergenic
TTGTGGATCTTGGCACCTGG+TGG 0.639384 4.2:+23115789 None:intergenic
GGAAGCTTCAAGGCTCAACA+GGG 0.640992 4.2:-23116383 MS.gene39530:CDS
AAATTTCGGCATATATACAG+AGG 0.647388 4.2:-23118345 MS.gene39530:intron
TTGGTTGCACTACAGAGAAG+CGG 0.648720 4.2:-23115521 MS.gene39530:CDS
TCTGTAATTCAGATAACTGG+TGG 0.650832 4.2:+23116032 None:intergenic
GAAGGGGTAATTGATGGTGA+TGG 0.656136 4.2:-23118725 MS.gene39530:CDS
GTTGTTGGTTCCTGAAAGTG+AGG 0.660598 4.2:-23119112 MS.gene39530:intron
ATCAAAATGGAAATGCCTAG+TGG 0.661824 4.2:-23117511 MS.gene39530:intron
GTACCAGCAAGCGTCAACCA+TGG 0.662349 4.2:-23115711 MS.gene39530:CDS
GATTGATCTCAACACTACTG+AGG 0.665345 4.2:-23119793 MS.gene39530:CDS
GAGGATAACGTCCTTCAAAG+AGG 0.666492 4.2:-23115662 MS.gene39530:CDS
CTCAAGGTAAGTACCAGGGG+AGG 0.666901 4.2:+23118566 None:intergenic
AGAGTCTTGCAGAACATGTG+GGG 0.670484 4.2:+23118656 None:intergenic
TGATGGTGATGGTGAAGGCG+AGG 0.675186 4.2:-23118708 MS.gene39530:CDS
GGTGGTGGAAGATGAGCCTG+AGG 0.683472 4.2:+23116339 None:intergenic
TATTTGTGCAGGCTGAGGAA+GGG 0.684256 4.2:-23119158 MS.gene39530:intron
TGTCTTCATGAGCTAGCCCG+CGG 0.693463 4.2:+23115573 None:intergenic
GTACTTGAAGATGAACCAGA+AGG 0.694738 4.2:+23119759 None:intergenic
TATCTGGCAAGTGACTGCAG+AGG 0.699849 4.2:+23115409 None:intergenic
ACCAGTTATCTGAATTACAG+AGG 0.702085 4.2:-23116030 MS.gene39530:CDS
CTTGTGGCAAAGGACCTGCA+CGG 0.708055 4.2:-23118378 MS.gene39530:CDS
GGCTGAGGAAGGGAACGATG+AGG 0.721717 4.2:-23119148 MS.gene39530:CDS
CAGACTTTGGGGAATCACTG+CGG 0.730858 4.2:-23116129 MS.gene39530:CDS
TCTGATACTAGCACTCATGG+TGG 0.734262 4.2:-23118626 MS.gene39530:CDS
GTGGTGGAAGATGAGCCTGA+GGG 0.740646 4.2:+23116340 None:intergenic
GCATTCACTTCGGAGCAAGG+CGG 0.745305 4.2:-23115333 MS.gene39530:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATAATAACAAAATTAATC+CGG - chr4.2:23119379-23119398 MS.gene39530:intron 10.0%
!!! TCTCAATTTATTTATTTTTT+TGG - chr4.2:23118831-23118850 MS.gene39530:intron 10.0%
!! TCTACTAATTAATCTATAAA+AGG - chr4.2:23118494-23118513 MS.gene39530:intron 15.0%
!! TTTATTGAAAATAGAATATC+AGG + chr4.2:23117775-23117794 None:intergenic 15.0%
!!! AATTTTGTTATTATAATCCA+TGG + chr4.2:23119375-23119394 None:intergenic 15.0%
!!! ACTTTTTTTCTTCTAAAATT+TGG - chr4.2:23115656-23115675 MS.gene39530:CDS 15.0%
!! AAAACTTTCAAAATTGAACA+AGG + chr4.2:23116549-23116568 None:intergenic 20.0%
!! AAACAATATGAAGTGAAATA+TGG + chr4.2:23118382-23118401 None:intergenic 20.0%
!! AAACTTTCAAAATTGAACAA+GGG + chr4.2:23116548-23116567 None:intergenic 20.0%
!! AAATAATTCCATTATTGAAC+TGG - chr4.2:23117987-23118006 MS.gene39530:CDS 20.0%
!! ACTTAACATAGGAAAAAATT+TGG - chr4.2:23118341-23118360 MS.gene39530:intron 20.0%
!! AGTTATTATTTCAATGCATT+TGG - chr4.2:23116612-23116631 MS.gene39530:intron 20.0%
!! ATAAATAAATTGAGACATAC+TGG + chr4.2:23118826-23118845 None:intergenic 20.0%
!! ATATTATCCGAAAAAGATAA+CGG + chr4.2:23115490-23115509 None:intergenic 20.0%
!! ATCATTTATATGCTTGAAAT+TGG - chr4.2:23117617-23117636 MS.gene39530:intron 20.0%
!! GATTAAGATTCTCTTAAATA+AGG + chr4.2:23117461-23117480 None:intergenic 20.0%
!! TAAATAAATTGAGACATACT+GGG + chr4.2:23118825-23118844 None:intergenic 20.0%
!! TCATTTATATGCTTGAAATT+GGG - chr4.2:23117618-23117637 MS.gene39530:intron 20.0%
!! TTCATTATAATCATCTCAAA+TGG + chr4.2:23116111-23116130 None:intergenic 20.0%
!!! AAACTTACCTTATTTACTAT+TGG + chr4.2:23118225-23118244 None:intergenic 20.0%
!!! ACTTGTTTCTCATTTTTATA+AGG - chr4.2:23116750-23116769 MS.gene39530:intron 20.0%
!!! CTAAAATTTGGTTTCTTTTT+GGG - chr4.2:23115668-23115687 MS.gene39530:CDS 20.0%
!!! TCTAAAATTTGGTTTCTTTT+TGG - chr4.2:23115667-23115686 MS.gene39530:CDS 20.0%
!!! TTGCATTTTTTTTTTGTCAA+TGG - chr4.2:23117705-23117724 MS.gene39530:CDS 20.0%
!!! TTTCAATAAAATTTTGCAGA+CGG - chr4.2:23117785-23117804 MS.gene39530:intron 20.0%
! AAACATCAGAATTCATTTGT+GGG + chr4.2:23119118-23119137 None:intergenic 25.0%
! AACATTTACATAGAGTAACA+AGG - chr4.2:23116960-23116979 MS.gene39530:intron 25.0%
! AAGCATTAACTATGTCTTTA+AGG + chr4.2:23117125-23117144 None:intergenic 25.0%
! AATTATTGGAATTACTGATG+TGG - chr4.2:23117513-23117532 MS.gene39530:CDS 25.0%
! CACTAATATGTATAGTTAGA+TGG + chr4.2:23117891-23117910 None:intergenic 25.0%
! CAGATTGATAAATGTAATGA+TGG + chr4.2:23118273-23118292 None:intergenic 25.0%
! CAGGCTATATAATAAAATGA+CGG + chr4.2:23117829-23117848 None:intergenic 25.0%
! CATCTAACTATACATATTAG+TGG - chr4.2:23117889-23117908 MS.gene39530:intron 25.0%
! CATTACACCAATAGTAAATA+AGG - chr4.2:23118215-23118234 MS.gene39530:CDS 25.0%
! CTTATATATGATAAATCCAC+AGG + chr4.2:23117684-23117703 None:intergenic 25.0%
! GAAAATTGTAGAAACTTACA+TGG - chr4.2:23118023-23118042 MS.gene39530:CDS 25.0%
! TAATAACAAAATTAATCCGG+TGG - chr4.2:23119382-23119401 MS.gene39530:intron 25.0%
! TAGAATACCAATTGATTGTT+GGG - chr4.2:23116789-23116808 MS.gene39530:intron 25.0%
! TATGAAGTGAAATATGGTAT+TGG + chr4.2:23118376-23118395 None:intergenic 25.0%
! TGTACACTCAATTAATTAGA+GGG + chr4.2:23118183-23118202 None:intergenic 25.0%
! TGTCGTGAAATATAAAATGT+CGG + chr4.2:23116992-23117011 None:intergenic 25.0%
!! AATCGAATGTTGTCTTTTAT+TGG - chr4.2:23115588-23115607 MS.gene39530:CDS 25.0%
!! AATTAATTAGAGGGTACAAT+TGG + chr4.2:23118174-23118193 None:intergenic 25.0%
!! TGATTTTCCGTTATCTTTTT+CGG - chr4.2:23115480-23115499 MS.gene39530:CDS 25.0%
!! TTACTATTGGTGTAATGTTT+TGG + chr4.2:23118212-23118231 None:intergenic 25.0%
!! TTACTATTTCTTTGTAGGAT+TGG - chr4.2:23117286-23117305 MS.gene39530:intron 25.0%
!!! AACTGATTTTTGAATGAACT+TGG - chr4.2:23116284-23116303 MS.gene39530:CDS 25.0%
!!! AAGTGACACTTATTTTGAAA+CGG + chr4.2:23118083-23118102 None:intergenic 25.0%
!!! TACAATCCAAGGTATTTTTA+TGG - chr4.2:23117174-23117193 MS.gene39530:intron 25.0%
!!! TGCTTTTACTATTTCTTTGT+AGG - chr4.2:23117281-23117300 MS.gene39530:intron 25.0%
!!! TGTTTTGATTGATAGAATGT+AGG + chr4.2:23116944-23116963 None:intergenic 25.0%
!!! TTTTTGAGTGAAACTTGTTA+TGG - chr4.2:23115843-23115862 MS.gene39530:CDS 25.0%
!!! TTTTTTAGTAGTTCGTGAAA+GGG - chr4.2:23117212-23117231 MS.gene39530:intron 25.0%
!!! TTTTTTTTTTGTCAATGGTG+TGG - chr4.2:23117710-23117729 MS.gene39530:CDS 25.0%
AAATTTCGGCATATATACAG+AGG - chr4.2:23116721-23116740 MS.gene39530:intron 30.0%
AACAAGAAGAAACTTGTATC+TGG - chr4.2:23116888-23116907 MS.gene39530:intron 30.0%
AATAGTCCTTCTCATTCTAA+AGG + chr4.2:23117959-23117978 None:intergenic 30.0%
AGGATGAATATTGCTTACTT+TGG + chr4.2:23119774-23119793 None:intergenic 30.0%
ATACAAACCCAACAATCAAT+TGG + chr4.2:23116799-23116818 None:intergenic 30.0%
ATCACAAACAAGTAGTAATG+AGG + chr4.2:23118589-23118608 None:intergenic 30.0%
ATCTATGTTAGTGTCAAGTT+TGG - chr4.2:23115741-23115760 MS.gene39530:CDS 30.0%
ATTGACTGATTGCAATCAAA+TGG - chr4.2:23118625-23118644 MS.gene39530:CDS 30.0%
ATTTAATCCACTTCCTCTTT+AGG - chr4.2:23116636-23116655 MS.gene39530:intron 30.0%
CAACTGAGTAAGAATAATCA+AGG + chr4.2:23117354-23117373 None:intergenic 30.0%
CAAGTAGTAATGAGGTTAAT+AGG + chr4.2:23118581-23118600 None:intergenic 30.0%
CCTAATAAACGAAGTTAGAA+AGG + chr4.2:23117594-23117613 None:intergenic 30.0%
CCTTTCTAACTTCGTTTATT+AGG - chr4.2:23117591-23117610 MS.gene39530:intron 30.0%
CTTGATTATTCTTACTCAGT+TGG - chr4.2:23117352-23117371 MS.gene39530:intron 30.0%
GAAACATCAGAATTCATTTG+TGG + chr4.2:23119119-23119138 None:intergenic 30.0%
GAATAGCCATAAAAATACCT+TGG + chr4.2:23117183-23117202 None:intergenic 30.0%
GTAGAATACCAATTGATTGT+TGG - chr4.2:23116788-23116807 MS.gene39530:intron 30.0%
GTGTACACTCAATTAATTAG+AGG + chr4.2:23118184-23118203 None:intergenic 30.0%
TATAAGGACAAGAACATTTC+AGG - chr4.2:23116766-23116785 MS.gene39530:intron 30.0%
TCATCTTCAAGTACAAGTAT+AGG - chr4.2:23115316-23115335 MS.gene39530:CDS 30.0%
TTATTATATAGCCTGCACTT+AGG - chr4.2:23117834-23117853 MS.gene39530:intron 30.0%
TTGAAGATGATTTCAATCCA+AGG - chr4.2:23119711-23119730 MS.gene39530:CDS 30.0%
! AATGTTGTCTTTTATTGGTC+GGG - chr4.2:23115593-23115612 MS.gene39530:CDS 30.0%
! AGTAACTTTTCATCTATCTC+CGG - chr4.2:23117078-23117097 MS.gene39530:intron 30.0%
! ATTTCTCATCATTTCAGGTA+AGG - chr4.2:23118649-23118668 MS.gene39530:CDS 30.0%
! CCTTTTATTATGCAGATTCA+CGG - chr4.2:23117486-23117505 MS.gene39530:intron 30.0%
! CTCTTTAAGAATTTGTGGAT+AGG + chr4.2:23117331-23117350 None:intergenic 30.0%
! CTTGAAGTAACTCAAGTTTT+TGG - chr4.2:23118429-23118448 MS.gene39530:intron 30.0%
! CTTTTATTATGCAGATTCAC+GGG - chr4.2:23117487-23117506 MS.gene39530:intron 30.0%
! GAATGTTGTCTTTTATTGGT+CGG - chr4.2:23115592-23115611 MS.gene39530:CDS 30.0%
! GATTGTTGGGTTTGTATTTT+CGG - chr4.2:23116802-23116821 MS.gene39530:intron 30.0%
! TCTGCATCTTTATTTGCAAT+GGG + chr4.2:23119635-23119654 None:intergenic 30.0%
! TTCTGCATCTTTATTTGCAA+TGG + chr4.2:23119636-23119655 None:intergenic 30.0%
! TTGCAAGGTCAAGAAATTTT+AGG - chr4.2:23118972-23118991 MS.gene39530:intron 30.0%
!! AAGGGAGTATTACTTAACAT+AGG - chr4.2:23118330-23118349 MS.gene39530:intron 30.0%
!! TATGCTTCTGAAATGAAAGA+TGG - chr4.2:23119434-23119453 MS.gene39530:intron 30.0%
!! TGTATTCCTTTAGAATGAGA+AGG - chr4.2:23117950-23117969 MS.gene39530:CDS 30.0%
!! TTCAAAATGAGTGTCGTTTA+AGG + chr4.2:23118306-23118325 None:intergenic 30.0%
!!! ACACTCATTTTGAAACAGAA+GGG - chr4.2:23118312-23118331 MS.gene39530:intron 30.0%
!!! CTTTTTGGGTTTTTACATGT+GGG - chr4.2:23115682-23115701 MS.gene39530:CDS 30.0%
!!! GTTTTTTAGTAGTTCGTGAA+AGG - chr4.2:23117211-23117230 MS.gene39530:intron 30.0%
!!! TCTTTTTGGGTTTTTACATG+TGG - chr4.2:23115681-23115700 MS.gene39530:CDS 30.0%
!!! TTTGGTTTTTCATTAACCGA+GGG - chr4.2:23119605-23119624 MS.gene39530:CDS 30.0%
!!! TTTTTGGTTCAGTTCTGTTT+TGG - chr4.2:23116002-23116021 MS.gene39530:CDS 30.0%
AATTCTACCTGTTAGAGGAA+TGG + chr4.2:23118910-23118929 None:intergenic 35.0%
AATTCTGATGTTTCCTGCAA+TGG - chr4.2:23119125-23119144 MS.gene39530:CDS 35.0%
ACAACAACACTTCCTTTCTT+TGG + chr4.2:23115427-23115446 None:intergenic 35.0%
ACCAGTTATCTGAATTACAG+AGG - chr4.2:23119036-23119055 MS.gene39530:intron 35.0%
ACCTCTGTAATTCAGATAAC+TGG + chr4.2:23119040-23119059 None:intergenic 35.0%
AGATTCACGGGACTAATTAT+TGG - chr4.2:23117499-23117518 MS.gene39530:intron 35.0%
AGTACAAGTATAGGTAGTGT+TGG - chr4.2:23115325-23115344 MS.gene39530:CDS 35.0%
ATCAAAATGGAAATGCCTAG+TGG - chr4.2:23117555-23117574 MS.gene39530:CDS 35.0%
ATCTTCAACATGTCTTGTGA+AGG + chr4.2:23119699-23119718 None:intergenic 35.0%
ATGATCTCTTTGCCAAAGAA+AGG - chr4.2:23115412-23115431 MS.gene39530:CDS 35.0%
ATGGCATTTCTCATCATTTC+AGG - chr4.2:23118644-23118663 MS.gene39530:CDS 35.0%
ATTCCTCTAACAGGTAGAAT+TGG - chr4.2:23118909-23118928 MS.gene39530:intron 35.0%
ATTCTTACTCAGTTGGAATG+AGG - chr4.2:23117359-23117378 MS.gene39530:intron 35.0%
ATTTCAAAGTAGCACACTCA+AGG + chr4.2:23116519-23116538 None:intergenic 35.0%
CATAGAATGTGTATTTGTGC+AGG - chr4.2:23115897-23115916 MS.gene39530:CDS 35.0%
CCATAAAGCCAGTTCAATAA+TGG + chr4.2:23117998-23118017 None:intergenic 35.0%
CCATAGTACTAAGTAGCTAT+AGG - chr4.2:23116181-23116200 MS.gene39530:intron 35.0%
CCGTGAATCTGCATAATAAA+AGG + chr4.2:23117489-23117508 None:intergenic 35.0%
CCTATAGCTACTTAGTACTA+TGG + chr4.2:23116184-23116203 None:intergenic 35.0%
CGTAAAGTATAGACAATGTC+AGG + chr4.2:23118407-23118426 None:intergenic 35.0%
GATTTGTACGCTGAAAAGAA+GGG + chr4.2:23115572-23115591 None:intergenic 35.0%
GTTAAGTGTCATGTTACCAA+AGG - chr4.2:23116149-23116168 MS.gene39530:intron 35.0%
TAACAAAATTAATCCGGTGG+AGG - chr4.2:23119385-23119404 MS.gene39530:intron 35.0%
TACTCAGTGTCTAAGTCTTA+GGG - chr4.2:23116074-23116093 MS.gene39530:CDS 35.0%
TAGAATGTAGGTCATCTTAC+CGG + chr4.2:23116932-23116951 None:intergenic 35.0%
TATAGTTAGATGGAAGACAG+AGG + chr4.2:23117881-23117900 None:intergenic 35.0%
TATGCTTGAAATTGGGTGTT+AGG - chr4.2:23117625-23117644 MS.gene39530:intron 35.0%
TATTTCACGACAATTGACAG+AGG - chr4.2:23117000-23117019 MS.gene39530:intron 35.0%
TCTGTAATTCAGATAACTGG+TGG + chr4.2:23119037-23119056 None:intergenic 35.0%
TGCTCAATGAGGAAATTGAT+GGG - chr4.2:23115712-23115731 MS.gene39530:CDS 35.0%
TGGATTGTAGTGTATGCTAA+AGG + chr4.2:23117163-23117182 None:intergenic 35.0%
TGTAAAAGTAGCTGTGTGTT+TGG - chr4.2:23119587-23119606 MS.gene39530:CDS 35.0%
TGTTGAGAGTAATCCTAAAG+AGG + chr4.2:23116652-23116671 None:intergenic 35.0%
TTACTCAGTGTCTAAGTCTT+AGG - chr4.2:23116073-23116092 MS.gene39530:CDS 35.0%
TTAGCATACACTACAATCCA+AGG - chr4.2:23117163-23117182 MS.gene39530:intron 35.0%
TTCATCAAAGCTAGAGTTTC+CGG - chr4.2:23118797-23118816 MS.gene39530:intron 35.0%
TTCCTCTAACAGGTAGAATT+GGG - chr4.2:23118910-23118929 MS.gene39530:intron 35.0%
TTCGGTTTCTAATAAACGCA+GGG - chr4.2:23116820-23116839 MS.gene39530:intron 35.0%
TTCTTTGGCAAAGAGATCAT+AGG + chr4.2:23115412-23115431 None:intergenic 35.0%
TTGCTCAATGAGGAAATTGA+TGG - chr4.2:23115711-23115730 MS.gene39530:CDS 35.0%
TTTCGGTTTCTAATAAACGC+AGG - chr4.2:23116819-23116838 MS.gene39530:intron 35.0%
! CAAGGCTCTTTAAGAATTTG+TGG + chr4.2:23117336-23117355 None:intergenic 35.0%
!! CCATTATTGAACTGGCTTTA+TGG - chr4.2:23117995-23118014 MS.gene39530:CDS 35.0%
!! GAGTGAAACTTGTTATGGTT+TGG - chr4.2:23115848-23115867 MS.gene39530:CDS 35.0%
!! GTTGCACTTGCTATAAAAAG+TGG + chr4.2:23116310-23116329 None:intergenic 35.0%
!! TTCTGGTTCTTCTGTTTGTT+TGG - chr4.2:23115363-23115382 MS.gene39530:CDS 35.0%
!! TTGATTGCATTTGCTGTTCA+TGG - chr4.2:23118540-23118559 MS.gene39530:intron 35.0%
!!! GACACTCATTTTGAAACAGA+AGG - chr4.2:23118311-23118330 MS.gene39530:intron 35.0%
!!! GACACTTATTTTGAAACGGA+GGG + chr4.2:23118079-23118098 None:intergenic 35.0%
!!! GTTTGGTTTTTCATTAACCG+AGG - chr4.2:23119604-23119623 MS.gene39530:CDS 35.0%
!!! TGACACTTATTTTGAAACGG+AGG + chr4.2:23118080-23118099 None:intergenic 35.0%
AAAAGGCTTGTCCATATGGT+TGG + chr4.2:23119208-23119227 None:intergenic 40.0%
AAGAGTCTTGCAGAACATGT+GGG + chr4.2:23116414-23116433 None:intergenic 40.0%
AATTGAGACATACTGGGAAC+CGG + chr4.2:23118819-23118838 None:intergenic 40.0%
AATTGCTCCATTCCTCTAAC+AGG - chr4.2:23118900-23118919 MS.gene39530:intron 40.0%
AATTGGGACATCAGACTTTG+GGG - chr4.2:23118926-23118945 MS.gene39530:intron 40.0%
ACAATTGACAGAGGAGAAGA+TGG - chr4.2:23117009-23117028 MS.gene39530:intron 40.0%
ACAGAAAAGGCTTGTCCATA+TGG + chr4.2:23119212-23119231 None:intergenic 40.0%
ACAGTAGTACAGAACTCCTA+CGG + chr4.2:23117928-23117947 None:intergenic 40.0%
ACTAGTTGCCATCAAGCTAT+TGG + chr4.2:23118751-23118770 None:intergenic 40.0%
ACTATGGTCTATGACTCCTT+TGG + chr4.2:23116168-23116187 None:intergenic 40.0%
ACTCAGTGTCTAAGTCTTAG+GGG - chr4.2:23116075-23116094 MS.gene39530:CDS 40.0%
AGAAGATGGCGAATTGAGAT+TGG - chr4.2:23117023-23117042 MS.gene39530:intron 40.0%
AGAATTGGGACATCAGACTT+TGG - chr4.2:23118924-23118943 MS.gene39530:intron 40.0%
AGCAAGTGCAACAAAAGTTG+AGG - chr4.2:23116318-23116337 MS.gene39530:CDS 40.0%
ATACTTCCTAGCCAACCATA+TGG - chr4.2:23119194-23119213 MS.gene39530:intron 40.0%
CAATGACGTTTCATTGCATG+AGG + chr4.2:23118877-23118896 None:intergenic 40.0%
CATAGAACGAACCTCTTTGA+AGG + chr4.2:23119418-23119437 None:intergenic 40.0%
CATGAAGACATGAACTCGTT+TGG - chr4.2:23119506-23119525 MS.gene39530:intron 40.0%
CGATTTGTACGCTGAAAAGA+AGG + chr4.2:23115573-23115592 None:intergenic 40.0%
CGGAAAATAGGCCTATTAGT+TGG + chr4.2:23119476-23119495 None:intergenic 40.0%
GAAGATGGCGAATTGAGATT+GGG - chr4.2:23117024-23117043 MS.gene39530:intron 40.0%
GAATTGGGACATCAGACTTT+GGG - chr4.2:23118925-23118944 MS.gene39530:intron 40.0%
GAGTAATCCTAAAGAGGAAG+TGG + chr4.2:23116646-23116665 None:intergenic 40.0%
GATTGATCTCAACACTACTG+AGG - chr4.2:23115273-23115292 MS.gene39530:CDS 40.0%
GCAAGTGCAACAAAAGTTGA+GGG - chr4.2:23116319-23116338 MS.gene39530:CDS 40.0%
GTACTTGAAGATGAACCAGA+AGG + chr4.2:23115310-23115329 None:intergenic 40.0%
GTAGCACTCTAGTGTTCAAA+AGG + chr4.2:23116237-23116256 None:intergenic 40.0%
GTTAGTGTCAAGTTTGGCAT+AGG - chr4.2:23115747-23115766 MS.gene39530:CDS 40.0%
TAAGAGTCTTGCAGAACATG+TGG + chr4.2:23116415-23116434 None:intergenic 40.0%
TATGCCGAAATTTCCATTCC+TGG + chr4.2:23116714-23116733 None:intergenic 40.0%
TCAACATGTCTTGTGAAGGA+GGG + chr4.2:23119695-23119714 None:intergenic 40.0%
TCGATAATCATGTCTCTCAC+AGG + chr4.2:23119794-23119813 None:intergenic 40.0%
TCTTCAAACATGCACACGAA+TGG + chr4.2:23118520-23118539 None:intergenic 40.0%
TGAAATTGGGTGTTAGGAGA+TGG - chr4.2:23117631-23117650 MS.gene39530:intron 40.0%
TGAATCTTTCCGATTCCAGA+AGG - chr4.2:23119154-23119173 MS.gene39530:intron 40.0%
TGCAACAAAAGTTGAGGGAA+GGG - chr4.2:23116324-23116343 MS.gene39530:CDS 40.0%
TTAGATGGCCTGGATCAAAA+TGG - chr4.2:23117542-23117561 MS.gene39530:CDS 40.0%
TTCAACATGTCTTGTGAAGG+AGG + chr4.2:23119696-23119715 None:intergenic 40.0%
! AATGCCTAGTGGTATTTTGC+TGG - chr4.2:23117566-23117585 MS.gene39530:CDS 40.0%
! ACTAATAGGCCTATTTTCCG+CGG - chr4.2:23119476-23119495 MS.gene39530:intron 40.0%
! AGTAGCTTAAGAAGTACGCT+CGG - chr4.2:23118461-23118480 MS.gene39530:intron 40.0%
! ATGCCTAGTGGTATTTTGCT+GGG - chr4.2:23117567-23117586 MS.gene39530:CDS 40.0%
! CTCATCATTTCAGGTAAGGT+GGG - chr4.2:23118653-23118672 MS.gene39530:CDS 40.0%
! CTTCTGTTTGTTTGGAGCTA+TGG - chr4.2:23115371-23115390 MS.gene39530:CDS 40.0%
! TCAATCCAAGGCATTCACTT+CGG - chr4.2:23119723-23119742 MS.gene39530:CDS 40.0%
! TCTCATCATTTCAGGTAAGG+TGG - chr4.2:23118652-23118671 MS.gene39530:CDS 40.0%
! TGATGGCAACTAGTTTGAAG+AGG - chr4.2:23118757-23118776 MS.gene39530:intron 40.0%
!! AGGCATTTCCATTTTGATCC+AGG + chr4.2:23117553-23117572 None:intergenic 40.0%
!! GGAAACTCTAGCTTTGATGA+AGG + chr4.2:23118798-23118817 None:intergenic 40.0%
!! GTAATTGATGGTGATGGTGA+TGG - chr4.2:23116347-23116366 MS.gene39530:CDS 40.0%
!! GTTGTTGTTTACTTCCCTCA+AGG - chr4.2:23115439-23115458 MS.gene39530:CDS 40.0%
!! TTTGGAGAGAGTGCTGAAAA+TGG - chr4.2:23116020-23116039 MS.gene39530:CDS 40.0%
!! TTTTTAATTGAGCTGCCCTG+CGG + chr4.2:23117053-23117072 None:intergenic 40.0%
!!! CACACAGCTACTTTTACATG+TGG + chr4.2:23119585-23119604 None:intergenic 40.0%
!!! TGGGTTTTGTTTGCTCAATG+AGG - chr4.2:23115701-23115720 MS.gene39530:CDS 40.0%
AAGACCTTCACAAGAGCTTG+TGG - chr4.2:23116672-23116691 MS.gene39530:intron 45.0%
AATGTAGGTCATCTTACCGG+AGG + chr4.2:23116929-23116948 None:intergenic 45.0%
AATTGAGATTGGGAATCCGC+AGG - chr4.2:23117034-23117053 MS.gene39530:intron 45.0%
ACAAGCCTCGTTGACAGAAA+AGG + chr4.2:23119225-23119244 None:intergenic 45.0%
ACAAGTCTCACCTCACTTTC+AGG + chr4.2:23115967-23115986 None:intergenic 45.0%
ACACGACAGAACACATGAGA+AGG + chr4.2:23115514-23115533 None:intergenic 45.0%
ACACTCAAGGTAAGTACCAG+GGG + chr4.2:23116506-23116525 None:intergenic 45.0%
ACCAAGATTCAATTGCTGGC+CGG + chr4.2:23117100-23117119 None:intergenic 45.0%
ACGGCCAGGAATGGAAATTT+CGG - chr4.2:23116707-23116726 MS.gene39530:intron 45.0%
ACTCAGTTGGAATGAGGTTC+AGG - chr4.2:23117365-23117384 MS.gene39530:intron 45.0%
AGAGTCTTGCAGAACATGTG+GGG + chr4.2:23116413-23116432 None:intergenic 45.0%
AGATGTTCCAAGTGTCCTTG+AGG + chr4.2:23115457-23115476 None:intergenic 45.0%
AGATTCACCAAAGCCATTGC+AGG + chr4.2:23119141-23119160 None:intergenic 45.0%
AGTTGCCATCAAGCTATTGG+TGG + chr4.2:23118748-23118767 None:intergenic 45.0%
AGTTTGAAGAGGACCAAGAC+TGG - chr4.2:23118768-23118787 MS.gene39530:intron 45.0%
ATGTGTATTTGTGCAGGCTG+AGG - chr4.2:23115903-23115922 MS.gene39530:CDS 45.0%
ATTGAGATTGGGAATCCGCA+GGG - chr4.2:23117035-23117054 MS.gene39530:intron 45.0%
CACACTCAAGGTAAGTACCA+GGG + chr4.2:23116507-23116526 None:intergenic 45.0%
CACAGGAGTTTCCTTAACTG+CGG + chr4.2:23117667-23117686 None:intergenic 45.0%
CCTGTGTCATCCTCTCATAT+GGG - chr4.2:23117742-23117761 MS.gene39530:CDS 45.0%
CTGAGAAGACCATCCATTTG+TGG + chr4.2:23119297-23119316 None:intergenic 45.0%
CTGATGTGGATCCTGTTAGA+TGG - chr4.2:23117527-23117546 MS.gene39530:CDS 45.0%
CTGTGTCATCCTCTCATATG+GGG - chr4.2:23117743-23117762 MS.gene39530:CDS 45.0%
GAACGATGAGGTGTATTGTC+AGG - chr4.2:23115930-23115949 MS.gene39530:CDS 45.0%
GACCATCCATTTGTGGATCT+TGG + chr4.2:23119290-23119309 None:intergenic 45.0%
GAGGAAGATGAAACACCTTC+TGG - chr4.2:23115292-23115311 MS.gene39530:CDS 45.0%
GAGGATAACGTCCTTCAAAG+AGG - chr4.2:23119404-23119423 MS.gene39530:intron 45.0%
GATGTTCCAAGTGTCCTTGA+GGG + chr4.2:23115456-23115475 None:intergenic 45.0%
GATGTTTCCTGCAATGGCTT+TGG - chr4.2:23119131-23119150 MS.gene39530:CDS 45.0%
GCAACAAAAGTTGAGGGAAG+GGG - chr4.2:23116325-23116344 MS.gene39530:CDS 45.0%
GCTTCTGATACTAGCACTCA+TGG - chr4.2:23116437-23116456 MS.gene39530:intron 45.0%
GGCTACCAAGATTCAATTGC+TGG + chr4.2:23117104-23117123 None:intergenic 45.0%
GTCAACGAGGCTTGTAGAAA+TGG - chr4.2:23119230-23119249 MS.gene39530:intron 45.0%
GTCACTTGCCAGATAAATCC+TGG - chr4.2:23119665-23119684 MS.gene39530:CDS 45.0%
GTCCCAATTCTACCTGTTAG+AGG + chr4.2:23118915-23118934 None:intergenic 45.0%
GTGCAACAAAAGTTGAGGGA+AGG - chr4.2:23116323-23116342 MS.gene39530:CDS 45.0%
TAACACAAGCACCTAAGTGC+AGG + chr4.2:23117848-23117867 None:intergenic 45.0%
TATTTGTGCAGGCTGAGGAA+GGG - chr4.2:23115908-23115927 MS.gene39530:CDS 45.0%
TCTGATACTAGCACTCATGG+TGG - chr4.2:23116440-23116459 MS.gene39530:intron 45.0%
TGATGAAGGCAATCCAGTCT+TGG + chr4.2:23118784-23118803 None:intergenic 45.0%
TGCCAAGATCCACAAATGGA+TGG - chr4.2:23119285-23119304 MS.gene39530:intron 45.0%
TGCTGGTACATCAACACTGA+TGG + chr4.2:23119344-23119363 None:intergenic 45.0%
TGGCACACTTTCAAAACCGT+AGG - chr4.2:23117909-23117928 MS.gene39530:CDS 45.0%
TGGTACACATTCACGCGATT+TGG - chr4.2:23119526-23119545 MS.gene39530:intron 45.0%
TTACTTCCCTCAAGGACACT+TGG - chr4.2:23115447-23115466 MS.gene39530:CDS 45.0%
TTCACAAGAGCTTGTGGCAA+AGG - chr4.2:23116678-23116697 MS.gene39530:intron 45.0%
TTCCACCACCAATAGCTTGA+TGG - chr4.2:23118740-23118759 MS.gene39530:CDS 45.0%
TTGAGGGAAGGGGTAATTGA+TGG - chr4.2:23116335-23116354 MS.gene39530:CDS 45.0%
TTGGTTGCACTACAGAGAAG+CGG - chr4.2:23119545-23119564 MS.gene39530:CDS 45.0%
TTTGATCCAGGCCATCTAAC+AGG + chr4.2:23117541-23117560 None:intergenic 45.0%
TTTGCCACAAGCTCTTGTGA+AGG + chr4.2:23116679-23116698 None:intergenic 45.0%
! ACAAGCCTTTTCTGTCAACG+AGG - chr4.2:23119217-23119236 MS.gene39530:intron 45.0%
! CTAATAGGCCTATTTTCCGC+GGG - chr4.2:23119477-23119496 MS.gene39530:intron 45.0%
! GGTGTATTGTCAGGTGTTGT+TGG - chr4.2:23115939-23115958 MS.gene39530:CDS 45.0%
!! ACTTTTTGATGGTCACCACC+AGG - chr4.2:23119262-23119281 MS.gene39530:intron 45.0%
!! ATAGGTAGTGTTGGTGCTGT+TGG - chr4.2:23115334-23115353 MS.gene39530:CDS 45.0%
!! CTTGCAAGACCTTCTGGAAT+CGG + chr4.2:23119166-23119185 None:intergenic 45.0%
!! GAAGGGGTAATTGATGGTGA+TGG - chr4.2:23116341-23116360 MS.gene39530:CDS 45.0%
!! GAATTACAGAGGTGCTATCC+CGG - chr4.2:23119047-23119066 MS.gene39530:intron 45.0%
!! GTTGTTGGTTCCTGAAAGTG+AGG - chr4.2:23115954-23115973 MS.gene39530:CDS 45.0%
!!! TTTATGTTTTTTTTTTTTTT+TGG - chr4.2:23115986-23116005 MS.gene39530:CDS 5.0%
AATCCATGGTTGACGCTTGC+TGG + chr4.2:23119361-23119380 None:intergenic 50.0%
ACAGAGAAGCGGTCAAGAGT+TGG - chr4.2:23119556-23119575 MS.gene39530:CDS 50.0%
ACATGTCTTGTGAAGGAGGG+AGG + chr4.2:23119692-23119711 None:intergenic 50.0%
AGGCCTATTAGTTGGCGTTG+AGG + chr4.2:23119468-23119487 None:intergenic 50.0%
AGGCTTCAACCCCATATGAG+AGG + chr4.2:23117755-23117774 None:intergenic 50.0%
AGGGAGGTCCAGGATTTATC+TGG + chr4.2:23119676-23119695 None:intergenic 50.0%
ATCTGGCAAGTGACTGCAGA+GGG + chr4.2:23119659-23119678 None:intergenic 50.0%
CAGGGGAGGAAAGCAATCTT+CGG + chr4.2:23116489-23116508 None:intergenic 50.0%
CAGGTGCCAAGATCCACAAA+TGG - chr4.2:23119281-23119300 MS.gene39530:intron 50.0%
CATTTGTGGATCTTGGCACC+TGG + chr4.2:23119283-23119302 None:intergenic 50.0%
CCCATATGAGAGGATGACAC+AGG + chr4.2:23117745-23117764 None:intergenic 50.0%
CGATTCCAGAAGGTCTTGCA+AGG - chr4.2:23119164-23119183 MS.gene39530:intron 50.0%
CGCAGTTAAGGAAACTCCTG+TGG - chr4.2:23117665-23117684 MS.gene39530:intron 50.0%
CTGCCTCAACGCCAACTAAT+AGG - chr4.2:23119462-23119481 MS.gene39530:intron 50.0%
CTTGACCTTGCAAGACCTTC+TGG + chr4.2:23118965-23118984 None:intergenic 50.0%
GAGATGCTGTTCTGTTCCTC+CGG - chr4.2:23116910-23116929 MS.gene39530:intron 50.0%
GCACACTCAAGGTAAGTACC+AGG + chr4.2:23116508-23116527 None:intergenic 50.0%
GCCTGTGTCATCCTCTCATA+TGG - chr4.2:23117741-23117760 MS.gene39530:CDS 50.0%
GCTCAACAGGGTTTCACCAT+GGG - chr4.2:23118695-23118714 MS.gene39530:CDS 50.0%
GCTTGTTCTGACCGCAGTTA+AGG - chr4.2:23117653-23117672 MS.gene39530:intron 50.0%
GGAAGCTTCAAGGCTCAACA+GGG - chr4.2:23118683-23118702 MS.gene39530:CDS 50.0%
GGCATTTGCTTACGACTGGA+TGG - chr4.2:23116853-23116872 MS.gene39530:intron 50.0%
GGGATGACATGGAAGCTTCA+AGG - chr4.2:23118673-23118692 MS.gene39530:CDS 50.0%
GGTCCCAGCAAAATACCACT+AGG + chr4.2:23117573-23117592 None:intergenic 50.0%
GTATTTGTGCAGGCTGAGGA+AGG - chr4.2:23115907-23115926 MS.gene39530:CDS 50.0%
GTCGTAAGCAAATGCCTTCG+TGG + chr4.2:23116849-23116868 None:intergenic 50.0%
GTTTCCTGTTGAAGCGATCC+CGG + chr4.2:23119084-23119103 None:intergenic 50.0%
TATCCCGGTTCAACCTATCC+CGG - chr4.2:23119062-23119081 MS.gene39530:intron 50.0%
TATCTGGCAAGTGACTGCAG+AGG + chr4.2:23119660-23119679 None:intergenic 50.0%
TCAGGTAAGGTGGGATGACA+TGG - chr4.2:23118662-23118681 MS.gene39530:CDS 50.0%
TCCGGCCAGCAATTGAATCT+TGG - chr4.2:23117096-23117115 MS.gene39530:intron 50.0%
TGAAGGACGTTATCCTCCAC+CGG + chr4.2:23119401-23119420 None:intergenic 50.0%
TGCCATCAAGCTATTGGTGG+TGG + chr4.2:23118745-23118764 None:intergenic 50.0%
TGGAAGCTTCAAGGCTCAAC+AGG - chr4.2:23118682-23118701 MS.gene39530:CDS 50.0%
TTGCTCCGAAGTGAATGCCT+TGG + chr4.2:23119731-23119750 None:intergenic 50.0%
TTTCCTGTTGAAGCGATCCC+GGG + chr4.2:23119083-23119102 None:intergenic 50.0%
! AAGGCATTCACTTCGGAGCA+AGG - chr4.2:23119730-23119749 MS.gene39530:CDS 50.0%
! CAGACTTTGGGGAATCACTG+CGG - chr4.2:23118937-23118956 MS.gene39530:intron 50.0%
! GCTTGTCCATATGGTTGGCT+AGG + chr4.2:23119203-23119222 None:intergenic 50.0%
!! AGTGTTGGTGCTGTTGGTTC+TGG - chr4.2:23115340-23115359 MS.gene39530:CDS 50.0%
!! ATTTGCAATGGGAGCACCCT+CGG + chr4.2:23119624-23119643 None:intergenic 50.0%
!! CGAAGGCATTTGCTTACGAC+TGG - chr4.2:23116849-23116868 MS.gene39530:intron 50.0%
!! GATGGTGATGGTGATGGTGA+AGG - chr4.2:23116353-23116372 MS.gene39530:CDS 50.0%
ATCCCGGTTCAACCTATCCC+GGG - chr4.2:23119063-23119082 MS.gene39530:intron 55.0%
ATTTCCATTCCTGGCCGTGC+AGG + chr4.2:23116705-23116724 None:intergenic 55.0%
CGAAGATTGCTTTCCTCCCC+TGG - chr4.2:23116487-23116506 MS.gene39530:intron 55.0%
CGGTTCCAGAAGGTCTTGCA+AGG - chr4.2:23118957-23118976 MS.gene39530:intron 55.0%
CTCAAGGTAAGTACCAGGGG+AGG + chr4.2:23116503-23116522 None:intergenic 55.0%
CTGAAGATGCTGCAGAGCGA+AGG - chr4.2:23117401-23117420 MS.gene39530:intron 55.0%
CTTGTGGCAAAGGACCTGCA+CGG - chr4.2:23116688-23116707 MS.gene39530:intron 55.0%
GAGAGGATGACACAGGCATG+AGG + chr4.2:23117738-23117757 None:intergenic 55.0%
GAGCTATGGCATGCTTGTGC+TGG - chr4.2:23115385-23115404 MS.gene39530:CDS 55.0%
GCATTCACTTCGGAGCAAGG+CGG - chr4.2:23119733-23119752 MS.gene39530:CDS 55.0%
GGAATCACTGCGGTTCCAGA+AGG - chr4.2:23118947-23118966 MS.gene39530:intron 55.0%
GGCTCAACAGGGTTTCACCA+TGG - chr4.2:23118694-23118713 MS.gene39530:CDS 55.0%
GTACCAGCAAGCGTCAACCA+TGG - chr4.2:23119355-23119374 MS.gene39530:intron 55.0%
GTGGATCCTGTTAGATGGCC+TGG - chr4.2:23117532-23117551 MS.gene39530:CDS 55.0%
TATCCCGGGATCGCTTCAAC+AGG - chr4.2:23119077-23119096 MS.gene39530:intron 55.0%
TGAGCTAGCCCGCGGAAAAT+AGG + chr4.2:23119488-23119507 None:intergenic 55.0%
TGTCTTCATGAGCTAGCCCG+CGG + chr4.2:23119496-23119515 None:intergenic 55.0%
TGTTGAAGCGATCCCGGGAT+AGG + chr4.2:23119078-23119097 None:intergenic 55.0%
TTGTGGATCTTGGCACCTGG+TGG + chr4.2:23119280-23119299 None:intergenic 55.0%
! ATCCCGGGATAGGTTGAACC+GGG + chr4.2:23119068-23119087 None:intergenic 55.0%
! GATCCCGGGATAGGTTGAAC+CGG + chr4.2:23119069-23119088 None:intergenic 55.0%
! GTGGTGGAAGATGAGCCTGA+GGG + chr4.2:23118729-23118748 None:intergenic 55.0%
!! GGTGCTGTTGGTTCTGGTTC+TGG - chr4.2:23115346-23115365 MS.gene39530:CDS 55.0%
!! TGATGGTGATGGTGAAGGCG+AGG - chr4.2:23116358-23116377 MS.gene39530:CDS 55.0%
CAATCTTCGGCTGCTCGACG+AGG + chr4.2:23116476-23116495 None:intergenic 60.0%
CCATGGGAGATTGAGCCCTC+AGG - chr4.2:23118711-23118730 MS.gene39530:CDS 60.0%
CCTGAGGGCTCAATCTCCCA+TGG + chr4.2:23118714-23118733 None:intergenic 60.0%
CTTGTGAAGGAGGGAGGTCC+AGG + chr4.2:23119686-23119705 None:intergenic 60.0%
GGCTGAGGAAGGGAACGATG+AGG - chr4.2:23115918-23115937 MS.gene39530:CDS 60.0%
TAAACGCAGGGCAGCCACGA+AGG - chr4.2:23116832-23116851 MS.gene39530:intron 60.0%
!! GGTGGTGGAAGATGAGCCTG+AGG + chr4.2:23118730-23118749 None:intergenic 60.0%
AGGACCTGCACGGCCAGGAA+TGG - chr4.2:23116698-23116717 MS.gene39530:intron 65.0%
GGCAAAGGACCTGCACGGCC+AGG - chr4.2:23116693-23116712 MS.gene39530:intron 70.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 23115262 23119826 23115262 ID=MS.gene39530
chr4.2 mRNA 23115262 23119826 23115262 ID=MS.gene39530.t1;Parent=MS.gene39530
chr4.2 exon 23119536 23119826 23119536 ID=MS.gene39530.t1.exon1;Parent=MS.gene39530.t1
chr4.2 CDS 23119536 23119826 23119536 ID=cds.MS.gene39530.t1;Parent=MS.gene39530.t1
chr4.2 exon 23119113 23119169 23119113 ID=MS.gene39530.t1.exon2;Parent=MS.gene39530.t1
chr4.2 CDS 23119113 23119169 23119113 ID=cds.MS.gene39530.t1;Parent=MS.gene39530.t1
chr4.2 exon 23118580 23118768 23118580 ID=MS.gene39530.t1.exon3;Parent=MS.gene39530.t1
chr4.2 CDS 23118580 23118768 23118580 ID=cds.MS.gene39530.t1;Parent=MS.gene39530.t1
chr4.2 exon 23118346 23118430 23118346 ID=MS.gene39530.t1.exon4;Parent=MS.gene39530.t1
chr4.2 CDS 23118346 23118430 23118346 ID=cds.MS.gene39530.t1;Parent=MS.gene39530.t1
chr4.2 exon 23118157 23118247 23118157 ID=MS.gene39530.t1.exon5;Parent=MS.gene39530.t1
chr4.2 CDS 23118157 23118247 23118157 ID=cds.MS.gene39530.t1;Parent=MS.gene39530.t1
chr4.2 exon 23117904 23118068 23117904 ID=MS.gene39530.t1.exon6;Parent=MS.gene39530.t1
chr4.2 CDS 23117904 23118068 23117904 ID=cds.MS.gene39530.t1;Parent=MS.gene39530.t1
chr4.2 exon 23117666 23117785 23117666 ID=MS.gene39530.t1.exon7;Parent=MS.gene39530.t1
chr4.2 CDS 23117666 23117785 23117666 ID=cds.MS.gene39530.t1;Parent=MS.gene39530.t1
chr4.2 exon 23117512 23117587 23117512 ID=MS.gene39530.t1.exon8;Parent=MS.gene39530.t1
chr4.2 CDS 23117512 23117587 23117512 ID=cds.MS.gene39530.t1;Parent=MS.gene39530.t1
chr4.2 exon 23116263 23116422 23116263 ID=MS.gene39530.t1.exon9;Parent=MS.gene39530.t1
chr4.2 CDS 23116263 23116422 23116263 ID=cds.MS.gene39530.t1;Parent=MS.gene39530.t1
chr4.2 exon 23115262 23116166 23115262 ID=MS.gene39530.t1.exon10;Parent=MS.gene39530.t1
chr4.2 CDS 23115262 23116166 23115262 ID=cds.MS.gene39530.t1;Parent=MS.gene39530.t1
Gene Sequence

>MS.gene39530

ATGATGGGTTTGATTGATCTCAACACTACTGAGGAAGATGAAACACCTTCTGGTTCATCTTCAAGTACAAGTATAGGTAGTGTTGGTGCTGTTGGTTCTGGTTCTGGTTCTTCTGTTTGTTTGGAGCTATGGCATGCTTGTGCTGGTCCTATGATCTCTTTGCCAAAGAAAGGAAGTGTTGTTGTTTACTTCCCTCAAGGACACTTGGAACATCTTCATGATTTTCCGTTATCTTTTTCGGATAATATTCCTTCTCATGTGTTCTGTCGTGTTGTTGATGTCAAGCTTCATGTGAGTTTTTGTTATTCCCTTCTTTTCAGCGTACAAATCGAATGTTGTCTTTTATTGGTCGGGTTATAGTTCAATATTCTATTTTCATGTTTTTTTTTGTTTTACTTTTTTTCTTCTAAAATTTGGTTTCTTTTTGGGTTTTTACATGTGGGTTTTGTTTGCTCAATGAGGAAATTGATGGGAAAATTATCTATGTTAGTGTCAAGTTTGGCATAGGTTGTTGTTCAATTGACAAATTTTGTGAATGACACTTTTGTTATCTGTGTGTTTTATCTCTTTTTTTTTTTTTTTTTTTGAGTGAAACTTGTTATGGTTTGGTTTTGTTGTTGCTTTGTATTTTTTGACATAGAATGTGTATTTGTGCAGGCTGAGGAAGGGAACGATGAGGTGTATTGTCAGGTGTTGTTGGTTCCTGAAAGTGAGGTGAGACTTGTTTATGTTTTTTTTTTTTTTTGGTTCAGTTCTGTTTTGGAGAGAGTGCTGAAAATGGAAAAAAAATCTTGATTAATCTTGAGAAATATTACTCAGTGTCTAAGTCTTAGGGGTCTAAGTTGACCATTTGAGATGATTATAATGAAATTGCTTGATTAAGCTATGTTAAGTGTCATGTTACCAAAGGAGTCATAGACCATAGTACTAAGTAGCTATAGGCTTGTTCTGTGTCTTTGTTGATTAACTAGTCCTTTTGAACACTAGAGTGCTACATTAGTATTAAATGAAGTGACTTTATGAACTGATTTTTGAATGAACTTGGCCACTTTTTATAGCAAGTGCAACAAAAGTTGAGGGAAGGGGTAATTGATGGTGATGGTGATGGTGAAGGCGAGGATACTGATGCTGTTATGAAGTCAACGACACCCCACATGTTCTGCAAGACTCTTACTGCTTCTGATACTAGCACTCATGGTGGATTCTCTGTACCTCGTCGAGCAGCCGAAGATTGCTTTCCTCCCCTGGTACTTACCTTGAGTGTGCTACTTTGAAATGACACACCCTTGTTCAATTTTGAAAGTTTTCTTTCATCAAAACTTGTATCTAATTTCTAAAATTGTGCTAAATAGTTATTATTTCAATGCATTTGGAATTTAATCCACTTCCTCTTTAGGATTACTCTCAACAAAGACCTTCACAAGAGCTTGTGGCAAAGGACCTGCACGGCCAGGAATGGAAATTTCGGCATATATACAGAGGTTTTTCACTTGTTTCTCATTTTTATAAGGACAAGAACATTTCAGGTAGAATACCAATTGATTGTTGGGTTTGTATTTTCGGTTTCTAATAAACGCAGGGCAGCCACGAAGGCATTTGCTTACGACTGGATGGAGTGCATTTGTTAACAAGAAGAAACTTGTATCTGGAGATGCTGTTCTGTTCCTCCGGTAAGATGACCTACATTCTATCAATCAAAACATTTACATAGAGTAACAAGGACTCATCCGACATTTTATATTTCACGACAATTGACAGAGGAGAAGATGGCGAATTGAGATTGGGAATCCGCAGGGCAGCTCAATTAAAAAATTGCAGTAACTTTTCATCTATCTCCGGCCAGCAATTGAATCTTGGTAGCCTTAAAGACATAGTTAATGCTTTATCTACTAGATGTGCCTTTAGCATACACTACAATCCAAGGTATTTTTATGGCTATTCTCTTGTACGTTTTTTAGTAGTTCGTGAAAGGGAAATCGTTCTTTTCTATCTACAATTTCTAGAGTGTAATATTTTCAATGCTTTTACTATTTCTTTGTAGGATTGGTTCATCTGAGTTCATCATACCTATCCACAAATTCTTAAAGAGCCTTGATTATTCTTACTCAGTTGGAATGAGGTTCAGGATGCGTTTTGAATCTGAAGATGCTGCAGAGCGAAGGTTTGTTCATGATTCAGTTTTTTGTATTCAGATAACCTTATTTAAGAGAATCTTAATCATGTTCCTTTTATTATGCAGATTCACGGGACTAATTATTGGAATTACTGATGTGGATCCTGTTAGATGGCCTGGATCAAAATGGAAATGCCTAGTGGTATTTTGCTGGGACCTTTCTAACTTCGTTTATTAGGATTATCATTTATATGCTTGAAATTGGGTGTTAGGAGATGGCTTGTTCTGACCGCAGTTAAGGAAACTCCTGTGGATTTATCATATATAAGTTTGCATTTTTTTTTTGTCAATGGTGTGGCTCCTCATGCCTGTGTCATCCTCTCATATGGGGTTGAAGCCTGATATTCTATTTTCAATAAAATTTTGCAGACGGTTTGTTAGTATGATTTTACCGTCATTTTATTATATAGCCTGCACTTAGGTGCTTGTGTTATAGCAAAATACCTCTGTCTTCCATCTAACTATACATATTAGTGGCACACTTTCAAAACCGTAGGAGTTCTGTACTACTGTTATGTATTCCTTTAGAATGAGAAGGACTATTATATAGTCAAATAATTCCATTATTGAACTGGCTTTATGGAATGTGAAAATTGTAGAAACTTACATGGATCAGTCTTTCAGTGTAATAATTAAATACTCCCTCCGTTTCAAAATAAGTGTCACTTTAGCAAAAATATTTTCTTTCAAAATGAATTTCACTTGCACTTTTCAATGTAGAATTATTATTCTACTTCCAATTGTACCCTCTAATTAATTGAGTGTACACTACTTCCAAAACATTACACCAATAGTAAATAAGGTAAGTTTAGTAAAATTGTCATGTCATTTGACACCATCATTACATTTATCAATCTGTGTATAAAAACCTTAAACGACACTCATTTTGAAACAGAAGGGAGTATTACTTAACATAGGAAAAAATTTGGATTTTCAAACCAATACCATATTTCACTTCATATTGTTTTGCCTGACATTGTCTATACTTTACGTTCTTGAAGTAACTCAAGTTTTTGGTAGATGTGAAGTAGCTTAAGAAGTACGCTCGGCAAGCGTATTTCTACTAATTAATCTATAAAAGGCCATTCGTGTGCATGTTTGAAGATTGATTGCATTTGCTGTTCATGGAAACTATGATTGCTTCCTATTAACCTCATTACTACTTGTTTGTGATGTCATATTTAGAGTAAATTGACTGATTGCAATCAAATGGCATTTCTCATCATTTCAGGTAAGGTGGGATGACATGGAAGCTTCAAGGCTCAACAGGGTTTCACCATGGGAGATTGAGCCCTCAGGCTCATCTTCCACCACCAATAGCTTGATGGCAACTAGTTTGAAGAGGACCAAGACTGGATTGCCTTCATCAAAGCTAGAGTTTCCGGTTCCCAGTATGTCTCAATTTATTTATTTTTTTGGTTTACTTTTGAATTTTTCTACCTCATGCAATGAAACGTCATTGATGAATTGCTCCATTCCTCTAACAGGTAGAATTGGGACATCAGACTTTGGGGAATCACTGCGGTTCCAGAAGGTCTTGCAAGGTCAAGAAATTTTAGGCGTTGATACTACTTTCAATAGTATCAGTGCTCATAGTCACCACCAGTTATCTGAATTACAGAGGTGCTATCCCGGTTCAACCTATCCCGGGATCGCTTCAACAGGAAACAACATCAGAATCCCACAAATGAATTCTGATGTTTCCTGCAATGGCTTTGGTGAATCTTTCCGATTCCAGAAGGTCTTGCAAGGTCAAGAAATACTTCCTAGCCAACCATATGGACAAGCCTTTTCTGTCAACGAGGCTTGTAGAAATGGTCGCTTTGGACTTTTTGATGGTCACCACCAGGTGCCAAGATCCACAAATGGATGGTCTTCTCAGACGAGTAACAACTCACATTTTCATCCATCAGTGTTGATGTACCAGCAAGCGTCAACCATGGATTATAATAACAAAATTAATCCGGTGGAGGATAACGTCCTTCAAAGAGGTTCGTTCTATGCTTCTGAAATGAAAGATGGTACATCTGCCTCAACGCCAACTAATAGGCCTATTTTCCGCGGGCTAGCTCATGAAGACATGAACTCGTTTGGTACACATTCACGCGATTTGGTTGCACTACAGAGAAGCGGTCAAGAGTTGGTTTCCACATGTAAAAGTAGCTGTGTGTTTGGTTTTTCATTAACCGAGGGTGCTCCCATTGCAAATAAAGATGCAGAACCCTCTGCAGTCACTTGCCAGATAAATCCTGGACCTCCCTCCTTCACAAGACATGTTGAAGATGATTTCAATCCAAGGCATTCACTTCGGAGCAAGGCGGTTGAAAATTACTATACCAAAGTAAGCAATATTCATCCTGTGAGAGACATGATTATCGATAGAGTATTCTAG
Protein sequence

>MS.gene39530.t1

MMGLIDLNTTEEDETPSGSSSSTSIGSVGAVGSGSGSSVCLELWHACAGPMISLPKKGSVVVYFPQGHLEHLHDFPLSFSDNIPSHVFCRVVDVKLHAEEGNDEVYCQVLLVPESEQVQQKLREGVIDGDGDGEGEDTDAVMKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGQEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAAQLKNCSNFSSISGQQLNLGSLKDIVNALSTRCAFSIHYNPRIGSSEFIIPIHKFLKSLDYSYSVGMRFRMRFESEDAAERRFTGLIIGITDVDPVRWPGSKWKCLVVRWDDMEASRLNRVSPWEIEPSGSSSTTNSLMATSLKRTKTGLPSSKLEFPVPSRIGTSDFGESLRFQKVLQGQEILGVDTTFNSISAHSHHQLSELQRCYPGSTYPGIASTGNNIRIPQMNSDVSCNGFGESFRFQKVLQGQEILPSQPYGQAFSVNEACRNGRFGLFDGHHQVPRSTNGWSSQTSNNSHFHPSVLMYQQASTMDYNNKINPVEDNVLQRGSFYASEMKDGTSASTPTNRPIFRGLAHEDMNSFGTHSRDLVALQRSGQELVSTCKSSCVFGFSLTEGAPIANKDAEPSAVTCQINPGPPSFTRHVEDDFNPRHSLRSKAVENYYTKVSNIHPVRDMIIDRVF