Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32566.t1 | XP_024639073.1 | 96.9 | 413 | 10 | 1 | 1 | 413 | 1 | 410 | 3.20E-222 | 780.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32566.t1 | B0C9F4 | 53.8 | 338 | 147 | 3 | 47 | 384 | 13 | 341 | 3.2e-98 | 360.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32566.t1 | A0A396HUE3 | 96.9 | 413 | 10 | 1 | 1 | 413 | 1 | 410 | 2.3e-222 | 780.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051983 | MS.gene32566 | 0.800096 | 1.69E-48 | -1.69E-46 |
| MS.gene054719 | MS.gene32566 | 0.809476 | 1.86E-50 | -1.69E-46 |
| MS.gene056899 | MS.gene32566 | -0.801428 | 9.05E-49 | -1.69E-46 |
| MS.gene056979 | MS.gene32566 | 0.804011 | 2.65E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene92356 | MS.gene32566 | PPI |
| MS.gene024959 | MS.gene32566 | PPI |
| MS.gene32566 | MS.gene046940 | PPI |
| MS.gene40523 | MS.gene32566 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32566.t1 | MTR_5g079860 | 96.837 | 411 | 10 | 1 | 1 | 411 | 1 | 408 | 0.0 | 822 |
| MS.gene32566.t1 | MTR_5g005050 | 39.510 | 286 | 157 | 6 | 120 | 393 | 86 | 367 | 6.33e-54 | 184 |
| MS.gene32566.t1 | MTR_8g064490 | 36.857 | 350 | 202 | 10 | 44 | 383 | 81 | 421 | 1.62e-50 | 176 |
| MS.gene32566.t1 | MTR_5g005050 | 35.439 | 285 | 135 | 6 | 120 | 393 | 86 | 332 | 9.32e-41 | 148 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32566.t1 | AT2G39670 | 70.123 | 405 | 111 | 4 | 8 | 403 | 17 | 420 | 0.0 | 562 |
| MS.gene32566.t1 | AT2G39670 | 69.363 | 408 | 112 | 5 | 8 | 403 | 17 | 423 | 0.0 | 553 |
| MS.gene32566.t1 | AT3G19630 | 40.690 | 290 | 152 | 8 | 118 | 391 | 74 | 359 | 3.21e-57 | 192 |
| MS.gene32566.t1 | AT1G60230 | 35.000 | 360 | 218 | 9 | 32 | 383 | 82 | 433 | 2.07e-54 | 187 |
Find 110 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTAACTTCTTTATTGTATT+TGG | 0.102949 | 5.1:-62029233 | None:intergenic |
| GGTGACTAATGTAGTCTTTA+TGG | 0.145319 | 5.1:+62028228 | MS.gene32566:CDS |
| CCTCAGTCTCAGGTTCTTCT+TGG | 0.188284 | 5.1:+62026403 | MS.gene32566:CDS |
| CAATTGTCTCCCTTAGTTTC+TGG | 0.213313 | 5.1:-62029540 | None:intergenic |
| TTCTTGTAGGATATACAAAT+TGG | 0.226433 | 5.1:+62029176 | MS.gene32566:intron |
| GAGCCTTCTATTGGATTAAA+AGG | 0.231828 | 5.1:-62029853 | None:intergenic |
| GGAATCCCAGCTTCCAAATA+TGG | 0.267536 | 5.1:+62030158 | MS.gene32566:CDS |
| CTGAGTTTCGCCGTCCTTAC+AGG | 0.268932 | 5.1:+62029875 | MS.gene32566:CDS |
| GTAACTGCAAGGTCCATATT+TGG | 0.284371 | 5.1:-62030171 | None:intergenic |
| TTGCAGTGCCTCAGGCATTT+AGG | 0.286812 | 5.1:+62027062 | MS.gene32566:intron |
| AATATGGACCTTGCAGTTAC+AGG | 0.294764 | 5.1:+62030174 | MS.gene32566:CDS |
| GGCACACCATTGCTTGAATA+AGG | 0.298869 | 5.1:+62028291 | MS.gene32566:CDS |
| CGAAACTCAGAGCCTTCTAT+TGG | 0.317774 | 5.1:-62029862 | None:intergenic |
| GTGCCCCAAGTACTGCCTTC+AGG | 0.344031 | 5.1:-62028273 | None:intergenic |
| GAACCCTTCTCATCTTCATT+AGG | 0.357570 | 5.1:-62027694 | None:intergenic |
| GCAAGCATTTGTTAATGCTT+TGG | 0.362056 | 5.1:+62030014 | MS.gene32566:CDS |
| GCTAAACTACTACATGAATA+TGG | 0.366452 | 5.1:+62029805 | MS.gene32566:CDS |
| GTCTCCCTTAGTTTCTGGTT+AGG | 0.377471 | 5.1:-62029535 | None:intergenic |
| TGCTTGCATTGCAGTGCCTC+AGG | 0.385823 | 5.1:+62027054 | MS.gene32566:intron |
| GTGACTAATGTAGTCTTTAT+GGG | 0.396455 | 5.1:+62028229 | MS.gene32566:CDS |
| TTTGCAGTTGTTATTGAAGT+TGG | 0.398916 | 5.1:+62027639 | MS.gene32566:intron |
| TGCATTTGCGTCCAGTCCTC+TGG | 0.405368 | 5.1:-62030070 | None:intergenic |
| CAATTTCCAGAAAACACCTT+TGG | 0.405431 | 5.1:+62030113 | MS.gene32566:CDS |
| TTGCGTCCAGTCCTCTGGTT+TGG | 0.406021 | 5.1:-62030065 | None:intergenic |
| AAACCTGCTCAACAATTTCA+TGG | 0.407549 | 5.1:-62027945 | None:intergenic |
| TATCATACTGCTTTCCTGTA+AGG | 0.409585 | 5.1:-62029889 | None:intergenic |
| CGCAGACTCTGACAACAATC+TGG | 0.425413 | 5.1:+62030137 | MS.gene32566:CDS |
| AGGAATGAGCTTGAGGAAGC+TGG | 0.428323 | 5.1:+62027082 | MS.gene32566:CDS |
| GCAACAACAGTGTTGAAAAC+TGG | 0.434797 | 5.1:-62027124 | None:intergenic |
| ATGCTCCTAACCAGAAACTA+AGG | 0.440088 | 5.1:+62029530 | MS.gene32566:CDS |
| TTAAACCTGAAGGCAGTACT+TGG | 0.440485 | 5.1:+62028268 | MS.gene32566:CDS |
| AACACTGTTGTTGCAACGGA+TGG | 0.445377 | 5.1:+62027133 | MS.gene32566:CDS |
| CAAGGTCCATATTTGGAAGC+TGG | 0.447943 | 5.1:-62030164 | None:intergenic |
| GAGCCATGAAATTGTTGAGC+AGG | 0.455181 | 5.1:+62027942 | MS.gene32566:CDS |
| CAACACAATTCCTCAGTCTC+AGG | 0.458720 | 5.1:+62026393 | MS.gene32566:CDS |
| AATGTAGTCTTTATGGGAAT+GGG | 0.461630 | 5.1:+62028235 | MS.gene32566:CDS |
| GTGCGAGGGGCATGGAATAG+TGG | 0.472551 | 5.1:-62026297 | None:intergenic |
| TCTTGTAGGATATACAAATT+GGG | 0.477367 | 5.1:+62029177 | MS.gene32566:intron |
| AGAAGAAGAAGAAGTTGCGA+AGG | 0.479599 | 5.1:-62026359 | None:intergenic |
| TGCAACGGATGGAACTGTTA+AGG | 0.495578 | 5.1:+62027144 | MS.gene32566:CDS |
| AAGGTCCATATTTGGAAGCT+GGG | 0.504412 | 5.1:-62030163 | None:intergenic |
| GCGGCACGTGTGCGAGGTGA+AGG | 0.504678 | 5.1:-62026331 | None:intergenic |
| CATTCACCTTATTCAAGCAA+TGG | 0.504951 | 5.1:-62028297 | None:intergenic |
| AATTTACCTGACCAAAATCA+AGG | 0.507652 | 5.1:-62026456 | None:intergenic |
| AGAAGAAGTTGCGAAGGAAA+TGG | 0.508278 | 5.1:-62026353 | None:intergenic |
| TAATGTAGTCTTTATGGGAA+TGG | 0.509539 | 5.1:+62028234 | MS.gene32566:CDS |
| CAATTACCTCACAGCTAAAG+TGG | 0.519075 | 5.1:-62029273 | None:intergenic |
| CACCACACGTGCGAGGGGCA+TGG | 0.521716 | 5.1:-62026305 | None:intergenic |
| GTTTCTGGTTAGGAGCATGT+AGG | 0.523254 | 5.1:-62029525 | None:intergenic |
| GCGTTTGAACACCTCCTCAA+TGG | 0.524945 | 5.1:-62028203 | None:intergenic |
| GACAGCATGTGTCTCATCAC+AGG | 0.527434 | 5.1:+62027726 | MS.gene32566:CDS |
| TAAACCTGAAGGCAGTACTT+GGG | 0.530652 | 5.1:+62028269 | MS.gene32566:CDS |
| TCTTCTTGGCTTATCCGAAA+CGG | 0.535280 | 5.1:+62026417 | MS.gene32566:CDS |
| TTCCATGCCCCTCGCACGTG+TGG | 0.543811 | 5.1:+62026303 | MS.gene32566:CDS |
| TTTATCATCTTATATACAAG+AGG | 0.550624 | 5.1:+62026613 | MS.gene32566:CDS |
| CTTGCATAAGTGCATCCAAT+GGG | 0.551233 | 5.1:-62029582 | None:intergenic |
| AAGTGCAAAGTCTTACCCAT+TGG | 0.552672 | 5.1:+62029567 | MS.gene32566:CDS |
| TGCACTTATGCAAGACTGCA+AGG | 0.557442 | 5.1:+62029591 | MS.gene32566:CDS |
| ATGCAGCTTGTGGTCAGCTA+CGG | 0.561024 | 5.1:+62030088 | MS.gene32566:CDS |
| ACCTAAAAGTGCATATTCAA+AGG | 0.561121 | 5.1:-62029644 | None:intergenic |
| AGATATTCAAGAGTTTACTC+AGG | 0.562671 | 5.1:+62026644 | MS.gene32566:CDS |
| TTTCAACACTGTTGTTGCAA+CGG | 0.563769 | 5.1:+62027129 | MS.gene32566:CDS |
| GGCATTTAGGAATGAGCTTG+AGG | 0.565772 | 5.1:+62027075 | MS.gene32566:CDS |
| TCTGGTTTGGCGTACACTAG+TGG | 0.566254 | 5.1:-62030052 | None:intergenic |
| CTTCCGCGAAACAAGTAGAC+GGG | 0.568795 | 5.1:+62029618 | MS.gene32566:CDS |
| TATTCCTAATGAAGATGAGA+AGG | 0.569257 | 5.1:+62027690 | MS.gene32566:CDS |
| AACAGATTGATTGAAACTGT+TGG | 0.569401 | 5.1:+62027667 | MS.gene32566:CDS |
| CCAAGAAGAACCTGAGACTG+AGG | 0.569865 | 5.1:-62026403 | None:intergenic |
| TTGTCAGAGTCTGCGGCCAA+AGG | 0.571073 | 5.1:-62030129 | None:intergenic |
| ATGAGCTTGAGGAAGCTGGA+TGG | 0.572364 | 5.1:+62027086 | MS.gene32566:CDS |
| AATGGGTAAGACTTTGCACT+TGG | 0.575944 | 5.1:-62029565 | None:intergenic |
| AAACCCGTCTACTTGTTTCG+CGG | 0.576482 | 5.1:-62029621 | None:intergenic |
| GTGATGAGACACATGCTGTC+AGG | 0.578912 | 5.1:-62027723 | None:intergenic |
| CAGATTGTTGTCAGAGTCTG+CGG | 0.584126 | 5.1:-62030136 | None:intergenic |
| GATATTCAAGAGTTTACTCA+GGG | 0.584950 | 5.1:+62026645 | MS.gene32566:CDS |
| TGTACGCCAAACCAGAGGAC+TGG | 0.586064 | 5.1:+62030059 | MS.gene32566:CDS |
| TTGAGGAGGTGTTCAAACGC+AGG | 0.587360 | 5.1:+62028206 | MS.gene32566:CDS |
| ATGATGACTATCTCCACCGT+GGG | 0.589221 | 5.1:+62029206 | MS.gene32566:CDS |
| TGAACAGGTCTTGGCCATTG+AGG | 0.590271 | 5.1:+62028189 | MS.gene32566:intron |
| TGCTCCTAACCAGAAACTAA+GGG | 0.592577 | 5.1:+62029531 | MS.gene32566:CDS |
| CTACTACATGAATATGGCAG+TGG | 0.597183 | 5.1:+62029811 | MS.gene32566:CDS |
| AAGCTGGATGGAAGGTCGGA+CGG | 0.599050 | 5.1:+62027098 | MS.gene32566:CDS |
| TCATCTTATATACAAGAGGA+AGG | 0.599803 | 5.1:+62026617 | MS.gene32566:CDS |
| TGAACCAATGTTAAACCTGA+AGG | 0.600380 | 5.1:+62028258 | MS.gene32566:CDS |
| GAGGAAGCTGGATGGAAGGT+CGG | 0.601140 | 5.1:+62027094 | MS.gene32566:CDS |
| AAGGACGCACCACACGTGCG+AGG | 0.603642 | 5.1:-62026312 | None:intergenic |
| GCTTGAGGAAGCTGGATGGA+AGG | 0.604593 | 5.1:+62027090 | MS.gene32566:CDS |
| GAAATGGCGGCACGTGTGCG+AGG | 0.604749 | 5.1:-62026337 | None:intergenic |
| ACTGCCTTCAGGTTTAACAT+TGG | 0.604771 | 5.1:-62028262 | None:intergenic |
| GGACGCACCACACGTGCGAG+GGG | 0.610180 | 5.1:-62026310 | None:intergenic |
| AGGACGCACCACACGTGCGA+GGG | 0.610726 | 5.1:-62026311 | None:intergenic |
| AAACCTGAAGGCAGTACTTG+GGG | 0.612474 | 5.1:+62028270 | MS.gene32566:CDS |
| ATTTACCTGACCAAAATCAA+GGG | 0.615901 | 5.1:-62026455 | None:intergenic |
| TGAGGAGGTGTTCAAACGCA+GGG | 0.618525 | 5.1:+62028207 | MS.gene32566:CDS |
| TTCAATCCACTTTAGCTGTG+AGG | 0.629054 | 5.1:+62029267 | MS.gene32566:CDS |
| AGCAGCTGGAATCAATGACT+CGG | 0.632061 | 5.1:+62029762 | MS.gene32566:intron |
| TCTTGCATAAGTGCATCCAA+TGG | 0.635870 | 5.1:-62029583 | None:intergenic |
| ATACTGCTTTCCTGTAAGGA+CGG | 0.636058 | 5.1:-62029885 | None:intergenic |
| ACAGGTCTTGGCCATTGAGG+AGG | 0.637192 | 5.1:+62028192 | MS.gene32566:intron |
| ATTCCTAATGAAGATGAGAA+GGG | 0.637233 | 5.1:+62027691 | MS.gene32566:CDS |
| AGCTCATTCCTAAATGCCTG+AGG | 0.647100 | 5.1:-62027070 | None:intergenic |
| GCAATCAACCTGTAACTGCA+AGG | 0.653477 | 5.1:-62030182 | None:intergenic |
| ACTTCCGCGAAACAAGTAGA+CGG | 0.656727 | 5.1:+62029617 | MS.gene32566:CDS |
| GACTGAGGAATTGTGTTGCG+AGG | 0.658708 | 5.1:-62026388 | None:intergenic |
| AGAAGTTGCGAAGGAAATGG+CGG | 0.675289 | 5.1:-62026350 | None:intergenic |
| CTGGACGCAAATGCAGCTTG+TGG | 0.692862 | 5.1:+62030078 | MS.gene32566:CDS |
| GATGACTATCTCCACCGTGG+GGG | 0.705173 | 5.1:+62029208 | MS.gene32566:CDS |
| ACTAGTGTACGCCAAACCAG+AGG | 0.706693 | 5.1:+62030054 | MS.gene32566:CDS |
| TGATGACTATCTCCACCGTG+GGG | 0.711405 | 5.1:+62029207 | MS.gene32566:CDS |
| AATGATGACTATCTCCACCG+TGG | 0.716532 | 5.1:+62029205 | MS.gene32566:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGATAATATTACATAAAA+CGG | - | chr5.1:62028669-62028688 | None:intergenic | 10.0% |
| !! | ATTGAATAAATTAATAATGA+AGG | - | chr5.1:62026501-62026520 | None:intergenic | 10.0% |
| !! | TTGAATAAATTAATAATGAA+GGG | - | chr5.1:62026500-62026519 | None:intergenic | 10.0% |
| !!! | TAATGTTAGATTTTTATATT+GGG | - | chr5.1:62028589-62028608 | None:intergenic | 10.0% |
| !!! | TCAATTTTATCAAATTATTA+CGG | + | chr5.1:62026783-62026802 | MS.gene32566:intron | 10.0% |
| !! | AAATAAAAATGTTAACAGAA+AGG | + | chr5.1:62028059-62028078 | MS.gene32566:intron | 15.0% |
| !! | AAATTAAAAACAACAACAAT+AGG | - | chr5.1:62027196-62027215 | None:intergenic | 15.0% |
| !! | TAAACACGATTTATAATTTA+TGG | + | chr5.1:62029935-62029954 | MS.gene32566:intron | 15.0% |
| !!! | CAATTTTATCAAATTATTAC+GGG | + | chr5.1:62026784-62026803 | MS.gene32566:intron | 15.0% |
| !!! | GTAATGTTAGATTTTTATAT+TGG | - | chr5.1:62028590-62028609 | None:intergenic | 15.0% |
| !! | AAAATATTCATGCATACATA+TGG | + | chr5.1:62028864-62028883 | MS.gene32566:intron | 20.0% |
| !! | AACATTATCATTTAAACTCT+GGG | + | chr5.1:62028440-62028459 | MS.gene32566:intron | 20.0% |
| !! | AGTTCTATAGAAATTAAAAC+AGG | + | chr5.1:62028745-62028764 | MS.gene32566:intron | 20.0% |
| !! | TAACATTATCATTTAAACTC+TGG | + | chr5.1:62028439-62028458 | MS.gene32566:intron | 20.0% |
| !! | TCATCCTATCAAATTATTAT+CGG | + | chr5.1:62026844-62026863 | MS.gene32566:intron | 20.0% |
| !! | TTAATCCAAACTTTGTAATT+TGG | + | chr5.1:62029986-62030005 | MS.gene32566:intron | 20.0% |
| !! | TTTATCATCTTATATACAAG+AGG | + | chr5.1:62026613-62026632 | MS.gene32566:CDS | 20.0% |
| !!! | AATTAGTTGTGTTTTATGTT+TGG | + | chr5.1:62028786-62028805 | MS.gene32566:intron | 20.0% |
| !!! | ATTCTTGTTTTTCTATTTGT+TGG | + | chr5.1:62027608-62027627 | MS.gene32566:intron | 20.0% |
| !!! | GTAGCTTTTAGTTTTTTTAA+AGG | + | chr5.1:62027368-62027387 | MS.gene32566:intron | 20.0% |
| !!! | TAAACTTATTTTGTTGTTGT+TGG | + | chr5.1:62026685-62026704 | MS.gene32566:intron | 20.0% |
| !!! | TAATTTGCTCTTTTATGTTA+TGG | - | chr5.1:62028771-62028790 | None:intergenic | 20.0% |
| !!! | TGAAAGTATTAACTTTTCAA+CGG | + | chr5.1:62027015-62027034 | MS.gene32566:intron | 20.0% |
| !!! | TGTAATATTATCTTTTCATG+CGG | + | chr5.1:62028674-62028693 | MS.gene32566:intron | 20.0% |
| !!! | TTGTTGTTGTTTTTAATTTC+TGG | + | chr5.1:62027197-62027216 | MS.gene32566:intron | 20.0% |
| !!! | TTTAATTTCTATAGAACTTC+TGG | - | chr5.1:62028743-62028762 | None:intergenic | 20.0% |
| !!! | TTTTTAAACTTATATGACAC+TGG | + | chr5.1:62027311-62027330 | MS.gene32566:intron | 20.0% |
| ! | AAAAATGAGATCAATGTCAA+TGG | - | chr5.1:62027466-62027485 | None:intergenic | 25.0% |
| ! | AAAATGTTAACAGAAAGGAA+AGG | + | chr5.1:62028064-62028083 | MS.gene32566:intron | 25.0% |
| ! | AAACTACTCTAATGTATCTA+TGG | - | chr5.1:62027975-62027994 | None:intergenic | 25.0% |
| ! | AATTTATTTATGGATCACGT+GGG | - | chr5.1:62028010-62028029 | None:intergenic | 25.0% |
| ! | ACTTGGTATTCTTAAGAATA+AGG | + | chr5.1:62027522-62027541 | MS.gene32566:intron | 25.0% |
| ! | ATCAGTGCATAAAAAAATCA+AGG | - | chr5.1:62027590-62027609 | None:intergenic | 25.0% |
| ! | ATCCATAAATAAATTGCCTA+AGG | + | chr5.1:62028015-62028034 | MS.gene32566:intron | 25.0% |
| ! | ATGGACATAACAAAAACAAA+TGG | - | chr5.1:62027838-62027857 | None:intergenic | 25.0% |
| ! | CTAAATATCCAAATAACAGA+TGG | - | chr5.1:62027857-62027876 | None:intergenic | 25.0% |
| ! | CTTGGTATTCTTAAGAATAA+GGG | + | chr5.1:62027523-62027542 | MS.gene32566:intron | 25.0% |
| ! | GCTAACTTCTTTATTGTATT+TGG | - | chr5.1:62029236-62029255 | None:intergenic | 25.0% |
| ! | TCTTGTAGGATATACAAATT+GGG | + | chr5.1:62029177-62029196 | MS.gene32566:intron | 25.0% |
| ! | TTACAAGCAAATATTTGTGA+AGG | - | chr5.1:62028349-62028368 | None:intergenic | 25.0% |
| ! | TTCTTGTAGGATATACAAAT+TGG | + | chr5.1:62029176-62029195 | MS.gene32566:intron | 25.0% |
| !! | ACATTGAATTTTATGTGAAC+AGG | + | chr5.1:62028174-62028193 | MS.gene32566:intron | 25.0% |
| !! | ATACCTTTTAATCCAATAGA+AGG | + | chr5.1:62029850-62029869 | MS.gene32566:CDS | 25.0% |
| !! | ATTTTTCTTAGCAAGGTTTT+AGG | + | chr5.1:62026580-62026599 | MS.gene32566:intron | 25.0% |
| !! | CATCTGTTATTTGGATATTT+AGG | + | chr5.1:62027855-62027874 | MS.gene32566:intron | 25.0% |
| !! | CCATCAAATGATATATTTTG+CGG | - | chr5.1:62029422-62029441 | None:intergenic | 25.0% |
| !! | TAAAGCAATGAGATCATTTT+CGG | + | chr5.1:62028099-62028118 | MS.gene32566:intron | 25.0% |
| !! | TGATTGAATTTTTCTTAGCA+AGG | + | chr5.1:62026573-62026592 | MS.gene32566:intron | 25.0% |
| !! | TGTTATTTGGATATTTAGGT+AGG | + | chr5.1:62027859-62027878 | MS.gene32566:intron | 25.0% |
| !! | TTTTTCTTAGCAAGGTTTTA+GGG | + | chr5.1:62026581-62026600 | MS.gene32566:intron | 25.0% |
| !!! | AAAGTATTAACTTTTCAACG+GGG | + | chr5.1:62027017-62027036 | MS.gene32566:intron | 25.0% |
| !!! | ACTCATTGGTTTTTACTTAT+TGG | + | chr5.1:62028463-62028482 | MS.gene32566:intron | 25.0% |
| !!! | ATATTTTTATGCATGTGAGA+CGG | - | chr5.1:62028851-62028870 | None:intergenic | 25.0% |
| !!! | CTCATTGGTTTTTACTTATT+GGG | + | chr5.1:62028464-62028483 | MS.gene32566:intron | 25.0% |
| !!! | GAAAGTATTAACTTTTCAAC+GGG | + | chr5.1:62027016-62027035 | MS.gene32566:intron | 25.0% |
| !!! | GATATTAACTTGCTTGTTAA+AGG | + | chr5.1:62027549-62027568 | MS.gene32566:intron | 25.0% |
| !!! | TGATTCAAGTTGTTTTCTTT+TGG | + | chr5.1:62027493-62027512 | MS.gene32566:intron | 25.0% |
| !!! | TTTTCTTTTGGTGTTTTACT+TGG | + | chr5.1:62027505-62027524 | MS.gene32566:intron | 25.0% |
| AAAACAACTTGAATCATTGC+CGG | - | chr5.1:62027489-62027508 | None:intergenic | 30.0% | |
| AACAGATTGATTGAAACTGT+TGG | + | chr5.1:62027667-62027686 | MS.gene32566:CDS | 30.0% | |
| AATGTAGTCTTTATGGGAAT+GGG | + | chr5.1:62028235-62028254 | MS.gene32566:CDS | 30.0% | |
| AATTTACCTGACCAAAATCA+AGG | - | chr5.1:62026459-62026478 | None:intergenic | 30.0% | |
| ACCTACCAAATTACAAAGTT+TGG | - | chr5.1:62029994-62030013 | None:intergenic | 30.0% | |
| ACCTCTCTTTATAAACTCAT+TGG | - | chr5.1:62028525-62028544 | None:intergenic | 30.0% | |
| AGACATCTCAAGATATAAAG+TGG | - | chr5.1:62027416-62027435 | None:intergenic | 30.0% | |
| AGATATTCAAGAGTTTACTC+AGG | + | chr5.1:62026644-62026663 | MS.gene32566:CDS | 30.0% | |
| AGTTGAATCTAAATTGCCTT+AGG | - | chr5.1:62028034-62028053 | None:intergenic | 30.0% | |
| ATTCCATCTTAGTAAGTGTT+AGG | + | chr5.1:62028623-62028642 | MS.gene32566:intron | 30.0% | |
| ATTCCTAATGAAGATGAGAA+GGG | + | chr5.1:62027691-62027710 | MS.gene32566:CDS | 30.0% | |
| ATTTACCTGACCAAAATCAA+GGG | - | chr5.1:62026458-62026477 | None:intergenic | 30.0% | |
| CAAATTACATTTGCGTTTAG+AGG | - | chr5.1:62027440-62027459 | None:intergenic | 30.0% | |
| CAATTTATTTATGGATCACG+TGG | - | chr5.1:62028011-62028030 | None:intergenic | 30.0% | |
| CCGCAAAATATATCATTTGA+TGG | + | chr5.1:62029419-62029438 | MS.gene32566:intron | 30.0% | |
| CGTCAAAAGAAATCATTGAT+CGG | + | chr5.1:62028892-62028911 | MS.gene32566:intron | 30.0% | |
| GACACCGATAATAATTTGAT+AGG | - | chr5.1:62026851-62026870 | None:intergenic | 30.0% | |
| GATATTCAAGAGTTTACTCA+GGG | + | chr5.1:62026645-62026664 | MS.gene32566:CDS | 30.0% | |
| GCTAAACTACTACATGAATA+TGG | + | chr5.1:62029805-62029824 | MS.gene32566:CDS | 30.0% | |
| GTATATAAGTGTGCTAATGT+TGG | + | chr5.1:62029140-62029159 | MS.gene32566:intron | 30.0% | |
| GTATTCTTAAGAATAAGGGT+AGG | + | chr5.1:62027527-62027546 | MS.gene32566:intron | 30.0% | |
| GTGACTAATGTAGTCTTTAT+GGG | + | chr5.1:62028229-62028248 | MS.gene32566:CDS | 30.0% | |
| TAATGTAGTCTTTATGGGAA+TGG | + | chr5.1:62028234-62028253 | MS.gene32566:CDS | 30.0% | |
| TATTCCTAATGAAGATGAGA+AGG | + | chr5.1:62027690-62027709 | MS.gene32566:CDS | 30.0% | |
| TCATCTTATATACAAGAGGA+AGG | + | chr5.1:62026617-62026636 | MS.gene32566:CDS | 30.0% | |
| TCCAAACTTTGTAATTTGGT+AGG | + | chr5.1:62029990-62030009 | MS.gene32566:intron | 30.0% | |
| TGCCTTAGGCAATTTATTTA+TGG | - | chr5.1:62028020-62028039 | None:intergenic | 30.0% | |
| TGTTATGTCCATCTGTTATT+TGG | + | chr5.1:62027846-62027865 | MS.gene32566:intron | 30.0% | |
| TTGTGATACCCCATAAAAAA+TGG | - | chr5.1:62027233-62027252 | None:intergenic | 30.0% | |
| TTTAAGCATTCATGTCAGTT+AGG | + | chr5.1:62026878-62026897 | MS.gene32566:intron | 30.0% | |
| ! | AAAGCAATGAGATCATTTTC+GGG | + | chr5.1:62028100-62028119 | MS.gene32566:intron | 30.0% |
| ! | AATATTATCTTTTCATGCGG+AGG | + | chr5.1:62028677-62028696 | MS.gene32566:intron | 30.0% |
| ! | AATTTTATGTGAACAGGTCT+TGG | + | chr5.1:62028180-62028199 | MS.gene32566:intron | 30.0% |
| ! | ACCTAAAAGTGCATATTCAA+AGG | - | chr5.1:62029647-62029666 | None:intergenic | 30.0% |
| ! | CGATCAATGATTTCTTTTGA+CGG | - | chr5.1:62028894-62028913 | None:intergenic | 30.0% |
| ! | GATCAGAATAAAGTTTTGCT+TGG | + | chr5.1:62029060-62029079 | MS.gene32566:intron | 30.0% |
| ! | TCCTTTGAATATGCACTTTT+AGG | + | chr5.1:62029643-62029662 | MS.gene32566:CDS | 30.0% |
| ! | TTTAGAGTTTAAACCTGCAA+CGG | + | chr5.1:62028394-62028413 | MS.gene32566:intron | 30.0% |
| ! | TTTGCAGTTGTTATTGAAGT+TGG | + | chr5.1:62027639-62027658 | MS.gene32566:intron | 30.0% |
| !! | TAACTTGCTTGTTAAAGGAT+GGG | + | chr5.1:62027554-62027573 | MS.gene32566:intron | 30.0% |
| !! | TGAATATGCACTTTTAGGTA+CGG | + | chr5.1:62029648-62029667 | MS.gene32566:intron | 30.0% |
| !! | TGACATTGATCTCATTTTTC+CGG | + | chr5.1:62027467-62027486 | MS.gene32566:intron | 30.0% |
| !! | TTAACTTGCTTGTTAAAGGA+TGG | + | chr5.1:62027553-62027572 | MS.gene32566:intron | 30.0% |
| !! | TTTTCTTAGCAAGGTTTTAG+GGG | + | chr5.1:62026582-62026601 | MS.gene32566:intron | 30.0% |
| !!! | AAGTTTTTGAAGTTCCGTTT+CGG | - | chr5.1:62026434-62026453 | None:intergenic | 30.0% |
| !!! | TCATTTGATGGCTTTTTTAG+TGG | + | chr5.1:62029431-62029450 | MS.gene32566:intron | 30.0% |
| !!! | TCCTGCTAACCATTTTTTAT+GGG | + | chr5.1:62027221-62027240 | MS.gene32566:intron | 30.0% |
| !!! | TTCCTGCTAACCATTTTTTA+TGG | + | chr5.1:62027220-62027239 | MS.gene32566:intron | 30.0% |
| AAACCTGCTCAACAATTTCA+TGG | - | chr5.1:62027948-62027967 | None:intergenic | 35.0% | |
| ACTGACAAGATCAGAATCAA+GGG | - | chr5.1:62029299-62029318 | None:intergenic | 35.0% | |
| CAAACATAATGACAGGAAAG+TGG | - | chr5.1:62029742-62029761 | None:intergenic | 35.0% | |
| CAATTTCCAGAAAACACCTT+TGG | + | chr5.1:62030113-62030132 | MS.gene32566:CDS | 35.0% | |
| CACAGGATATTATACACACA+TGG | + | chr5.1:62026745-62026764 | MS.gene32566:intron | 35.0% | |
| CATTCACCTTATTCAAGCAA+TGG | - | chr5.1:62028300-62028319 | None:intergenic | 35.0% | |
| GAACCTAACACTTACTAAGA+TGG | - | chr5.1:62028629-62028648 | None:intergenic | 35.0% | |
| GAGCCTTCTATTGGATTAAA+AGG | - | chr5.1:62029856-62029875 | None:intergenic | 35.0% | |
| GATCTTGTCAGTCAAGAATT+AGG | + | chr5.1:62029307-62029326 | MS.gene32566:intron | 35.0% | |
| GCCAATGAGTTTATAAAGAG+AGG | + | chr5.1:62028521-62028540 | MS.gene32566:intron | 35.0% | |
| GGTGACTAATGTAGTCTTTA+TGG | + | chr5.1:62028228-62028247 | MS.gene32566:CDS | 35.0% | |
| TATCATACTGCTTTCCTGTA+AGG | - | chr5.1:62029892-62029911 | None:intergenic | 35.0% | |
| TGAACCAATGTTAAACCTGA+AGG | + | chr5.1:62028258-62028277 | MS.gene32566:CDS | 35.0% | |
| TTCAATGTTATCCTGCTTTG+TGG | - | chr5.1:62028162-62028181 | None:intergenic | 35.0% | |
| TTGCACTAAATAGCGTATCA+CGG | - | chr5.1:62028943-62028962 | None:intergenic | 35.0% | |
| TTTCAACACTGTTGTTGCAA+CGG | + | chr5.1:62027129-62027148 | MS.gene32566:CDS | 35.0% | |
| ! | AGGGACATGGATTTCTTTTA+TGG | + | chr5.1:62028700-62028719 | MS.gene32566:intron | 35.0% |
| ! | CAAAAACTTGCCCTTGATTT+TGG | + | chr5.1:62026445-62026464 | MS.gene32566:CDS | 35.0% |
| ! | GCAAGCATTTGTTAATGCTT+TGG | + | chr5.1:62030014-62030033 | MS.gene32566:CDS | 35.0% |
| !! | AAAACCGATTTGTAAGGTGA+GGG | - | chr5.1:62028550-62028569 | None:intergenic | 35.0% |
| !! | ATTTAAACTCTGGGACTCAT+TGG | + | chr5.1:62028449-62028468 | MS.gene32566:intron | 35.0% |
| !! | CACAAAAAGAGCATTTCAGA+GGG | - | chr5.1:62027888-62027907 | None:intergenic | 35.0% |
| !!! | CCTGCTAACCATTTTTTATG+GGG | + | chr5.1:62027222-62027241 | MS.gene32566:intron | 35.0% |
| !!! | TTTCTTAGCAAGGTTTTAGG+GGG | + | chr5.1:62026583-62026602 | MS.gene32566:intron | 35.0% |
| AAGGTCCATATTTGGAAGCT+GGG | - | chr5.1:62030166-62030185 | None:intergenic | 40.0% | |
| AAGTGCAAAGTCTTACCCAT+TGG | + | chr5.1:62029567-62029586 | MS.gene32566:CDS | 40.0% | |
| AATATGGACCTTGCAGTTAC+AGG | + | chr5.1:62030174-62030193 | MS.gene32566:CDS | 40.0% | |
| AATGGGTAAGACTTTGCACT+TGG | - | chr5.1:62029568-62029587 | None:intergenic | 40.0% | |
| AGAAGAAGAAGAAGTTGCGA+AGG | - | chr5.1:62026362-62026381 | None:intergenic | 40.0% | |
| AGAAGAAGTTGCGAAGGAAA+TGG | - | chr5.1:62026356-62026375 | None:intergenic | 40.0% | |
| AGCTGCTCAAACATAATGAC+AGG | - | chr5.1:62029749-62029768 | None:intergenic | 40.0% | |
| AGGCTGATGGAAGATACAAA+AGG | - | chr5.1:62029508-62029527 | None:intergenic | 40.0% | |
| AGGTTCTCTTGCTACTGAAT+TGG | + | chr5.1:62028643-62028662 | MS.gene32566:intron | 40.0% | |
| AGTGATTGAATGTAACCACG+TGG | - | chr5.1:62026933-62026952 | None:intergenic | 40.0% | |
| AGTGTGCTAATGTTGGATTC+TGG | + | chr5.1:62029147-62029166 | MS.gene32566:intron | 40.0% | |
| ATACTGCTTTCCTGTAAGGA+CGG | - | chr5.1:62029888-62029907 | None:intergenic | 40.0% | |
| ATGCTCCTAACCAGAAACTA+AGG | + | chr5.1:62029530-62029549 | MS.gene32566:CDS | 40.0% | |
| ATGTGTAATGACACTGACAC+AGG | + | chr5.1:62026728-62026747 | MS.gene32566:intron | 40.0% | |
| CAATTACCTCACAGCTAAAG+TGG | - | chr5.1:62029276-62029295 | None:intergenic | 40.0% | |
| CAATTGTCTCCCTTAGTTTC+TGG | - | chr5.1:62029543-62029562 | None:intergenic | 40.0% | |
| CCCCATAAAAAATGGTTAGC+AGG | - | chr5.1:62027225-62027244 | None:intergenic | 40.0% | |
| CTACTACATGAATATGGCAG+TGG | + | chr5.1:62029811-62029830 | MS.gene32566:CDS | 40.0% | |
| CTTGCATAAGTGCATCCAAT+GGG | - | chr5.1:62029585-62029604 | None:intergenic | 40.0% | |
| GAACCCTTCTCATCTTCATT+AGG | - | chr5.1:62027697-62027716 | None:intergenic | 40.0% | |
| GACTGACAAGATCAGAATCA+AGG | - | chr5.1:62029300-62029319 | None:intergenic | 40.0% | |
| GGCTGATGGAAGATACAAAA+GGG | - | chr5.1:62029507-62029526 | None:intergenic | 40.0% | |
| GTAACTGCAAGGTCCATATT+TGG | - | chr5.1:62030174-62030193 | None:intergenic | 40.0% | |
| GTGATTGAATGTAACCACGT+GGG | - | chr5.1:62026932-62026951 | None:intergenic | 40.0% | |
| GTTCGTGTTAGTGTTGTGTT+TGG | + | chr5.1:62026982-62027001 | MS.gene32566:intron | 40.0% | |
| TAAACCTGAAGGCAGTACTT+GGG | + | chr5.1:62028269-62028288 | MS.gene32566:CDS | 40.0% | |
| TCATTAACCTTACTGCACGA+GGG | - | chr5.1:62029700-62029719 | None:intergenic | 40.0% | |
| TCTTCTTGGCTTATCCGAAA+CGG | + | chr5.1:62026417-62026436 | MS.gene32566:CDS | 40.0% | |
| TCTTGCATAAGTGCATCCAA+TGG | - | chr5.1:62029586-62029605 | None:intergenic | 40.0% | |
| TGCTAATGTTGGATTCTGGT+TGG | + | chr5.1:62029151-62029170 | MS.gene32566:intron | 40.0% | |
| TGCTCCTAACCAGAAACTAA+GGG | + | chr5.1:62029531-62029550 | MS.gene32566:CDS | 40.0% | |
| TGTCATTATGTTTGAGCAGC+TGG | + | chr5.1:62029748-62029767 | MS.gene32566:intron | 40.0% | |
| TTAAACCTGAAGGCAGTACT+TGG | + | chr5.1:62028268-62028287 | MS.gene32566:CDS | 40.0% | |
| TTCAATCCACTTTAGCTGTG+AGG | + | chr5.1:62029267-62029286 | MS.gene32566:CDS | 40.0% | |
| TTCATTAACCTTACTGCACG+AGG | - | chr5.1:62029701-62029720 | None:intergenic | 40.0% | |
| TTCGTTCGTTGTTCATACTC+TGG | + | chr5.1:62029372-62029391 | MS.gene32566:intron | 40.0% | |
| TTCTATTCTACGCGGGATTT+GGG | - | chr5.1:62028496-62028515 | None:intergenic | 40.0% | |
| TTTCTATTCTACGCGGGATT+TGG | - | chr5.1:62028497-62028516 | None:intergenic | 40.0% | |
| TTTCTGTTTCACCACAAAGC+AGG | + | chr5.1:62028148-62028167 | MS.gene32566:intron | 40.0% | |
| ! | AAATGCTCTTTTTGTGCCAC+TGG | + | chr5.1:62027892-62027911 | MS.gene32566:CDS | 40.0% |
| ! | AACCTAGTTAAGAGCACAGA+TGG | - | chr5.1:62028420-62028439 | None:intergenic | 40.0% |
| ! | ACTGCCTTCAGGTTTAACAT+TGG | - | chr5.1:62028265-62028284 | None:intergenic | 40.0% |
| ! | ATTATCTTTTCATGCGGAGG+AGG | + | chr5.1:62028680-62028699 | MS.gene32566:intron | 40.0% |
| ! | GCAACAACAGTGTTGAAAAC+TGG | - | chr5.1:62027127-62027146 | None:intergenic | 40.0% |
| ! | GCTAATGTTGGATTCTGGTT+GGG | + | chr5.1:62029152-62029171 | MS.gene32566:intron | 40.0% |
| ! | TATTGTATTTGGAACCCCCA+CGG | - | chr5.1:62029225-62029244 | None:intergenic | 40.0% |
| ! | TTATCTTTTCATGCGGAGGA+GGG | + | chr5.1:62028681-62028700 | MS.gene32566:intron | 40.0% |
| !! | AAACCGATTTGTAAGGTGAG+GGG | - | chr5.1:62028549-62028568 | None:intergenic | 40.0% |
| !! | CAAAACCGATTTGTAAGGTG+AGG | - | chr5.1:62028551-62028570 | None:intergenic | 40.0% |
| !! | CCTTACAAATCGGTTTTGCA+AGG | + | chr5.1:62028553-62028572 | MS.gene32566:intron | 40.0% |
| !! | CCTTGCAAAACCGATTTGTA+AGG | - | chr5.1:62028556-62028575 | None:intergenic | 40.0% |
| !! | CTTTTTGTGCCACTGGAAAA+GGG | + | chr5.1:62027899-62027918 | MS.gene32566:CDS | 40.0% |
| !! | GCACAAAAAGAGCATTTCAG+AGG | - | chr5.1:62027889-62027908 | None:intergenic | 40.0% |
| !! | GCTCTATTTCTATTCTACGC+GGG | - | chr5.1:62028503-62028522 | None:intergenic | 40.0% |
| !! | GGCTCTATTTCTATTCTACG+CGG | - | chr5.1:62028504-62028523 | None:intergenic | 40.0% |
| !! | TCTTTTTGTGCCACTGGAAA+AGG | + | chr5.1:62027898-62027917 | MS.gene32566:CDS | 40.0% |
| !! | TTTTTGTGCCACTGGAAAAG+GGG | + | chr5.1:62027900-62027919 | MS.gene32566:CDS | 40.0% |
| AAACCCGTCTACTTGTTTCG+CGG | - | chr5.1:62029624-62029643 | None:intergenic | 45.0% | |
| AAACCTGAAGGCAGTACTTG+GGG | + | chr5.1:62028270-62028289 | MS.gene32566:CDS | 45.0% | |
| AACACTGTTGTTGCAACGGA+TGG | + | chr5.1:62027133-62027152 | MS.gene32566:CDS | 45.0% | |
| AATGATGACTATCTCCACCG+TGG | + | chr5.1:62029205-62029224 | MS.gene32566:CDS | 45.0% | |
| ACTTCCGCGAAACAAGTAGA+CGG | + | chr5.1:62029617-62029636 | MS.gene32566:CDS | 45.0% | |
| AGAAGTTGCGAAGGAAATGG+CGG | - | chr5.1:62026353-62026372 | None:intergenic | 45.0% | |
| AGCAGCTGGAATCAATGACT+CGG | + | chr5.1:62029762-62029781 | MS.gene32566:intron | 45.0% | |
| AGCTCATTCCTAAATGCCTG+AGG | - | chr5.1:62027073-62027092 | None:intergenic | 45.0% | |
| AGGGAGGAACAAGAATGTGT+TGG | - | chr5.1:62029681-62029700 | None:intergenic | 45.0% | |
| ATGATGACTATCTCCACCGT+GGG | + | chr5.1:62029206-62029225 | MS.gene32566:CDS | 45.0% | |
| CAACACAATTCCTCAGTCTC+AGG | + | chr5.1:62026393-62026412 | MS.gene32566:CDS | 45.0% | |
| CAAGGTCCATATTTGGAAGC+TGG | - | chr5.1:62030167-62030186 | None:intergenic | 45.0% | |
| CAGATTGTTGTCAGAGTCTG+CGG | - | chr5.1:62030139-62030158 | None:intergenic | 45.0% | |
| CGAAACTCAGAGCCTTCTAT+TGG | - | chr5.1:62029865-62029884 | None:intergenic | 45.0% | |
| GAGCCATGAAATTGTTGAGC+AGG | + | chr5.1:62027942-62027961 | MS.gene32566:CDS | 45.0% | |
| GGAATCCCAGCTTCCAAATA+TGG | + | chr5.1:62030158-62030177 | MS.gene32566:CDS | 45.0% | |
| GGCACACCATTGCTTGAATA+AGG | + | chr5.1:62028291-62028310 | MS.gene32566:CDS | 45.0% | |
| GGCATTTAGGAATGAGCTTG+AGG | + | chr5.1:62027075-62027094 | MS.gene32566:CDS | 45.0% | |
| GTACCCCTCACCTTACAAAT+CGG | + | chr5.1:62028543-62028562 | MS.gene32566:intron | 45.0% | |
| TCATACTCTGGTGTCTGATC+TGG | + | chr5.1:62029384-62029403 | MS.gene32566:intron | 45.0% | |
| TGCAACGGATGGAACTGTTA+AGG | + | chr5.1:62027144-62027163 | MS.gene32566:CDS | 45.0% | |
| TGCACTTATGCAAGACTGCA+AGG | + | chr5.1:62029591-62029610 | MS.gene32566:CDS | 45.0% | |
| ! | ATTCTGGTTGGGCTTCTTGT+AGG | + | chr5.1:62029163-62029182 | MS.gene32566:intron | 45.0% |
| ! | CGGTTTTGCAAGGATGAGTT+AGG | + | chr5.1:62028563-62028582 | MS.gene32566:intron | 45.0% |
| ! | GTCTGATCTGGTCTGATTTG+TGG | + | chr5.1:62029396-62029415 | MS.gene32566:intron | 45.0% |
| !! | ACTTGCCCTTGATTTTGGTC+AGG | + | chr5.1:62026450-62026469 | MS.gene32566:CDS | 45.0% |
| !! | GGGGCTTTTCAAGGAATCTT+CGG | + | chr5.1:62027920-62027939 | MS.gene32566:CDS | 45.0% |
| !! | GTCTCCCTTAGTTTCTGGTT+AGG | - | chr5.1:62029538-62029557 | None:intergenic | 45.0% |
| !! | GTTTCTGGTTAGGAGCATGT+AGG | - | chr5.1:62029528-62029547 | None:intergenic | 45.0% |
| !! | TTTTGTGCCACTGGAAAAGG+GGG | + | chr5.1:62027901-62027920 | MS.gene32566:CDS | 45.0% |
| !! | ATAATAAAATGAAATATAAA+AGG | - | chr5.1:62029096-62029115 | None:intergenic | 5.0% |
| !!! | TTATTTTATAAAATTATTCA+TGG | + | chr5.1:62026954-62026973 | MS.gene32566:intron | 5.0% |
| ACTAGTGTACGCCAAACCAG+AGG | + | chr5.1:62030054-62030073 | MS.gene32566:CDS | 50.0% | |
| AGCGTATCACGGAGCAATAG+CGG | - | chr5.1:62028932-62028951 | None:intergenic | 50.0% | |
| AGGAATGAGCTTGAGGAAGC+TGG | + | chr5.1:62027082-62027101 | MS.gene32566:CDS | 50.0% | |
| ATGAGCTTGAGGAAGCTGGA+TGG | + | chr5.1:62027086-62027105 | MS.gene32566:CDS | 50.0% | |
| ATGCAGCTTGTGGTCAGCTA+CGG | + | chr5.1:62030088-62030107 | MS.gene32566:CDS | 50.0% | |
| CCAAGAAGAACCTGAGACTG+AGG | - | chr5.1:62026406-62026425 | None:intergenic | 50.0% | |
| CCTCAGTCTCAGGTTCTTCT+TGG | + | chr5.1:62026403-62026422 | MS.gene32566:CDS | 50.0% | |
| CGCAGACTCTGACAACAATC+TGG | + | chr5.1:62030137-62030156 | MS.gene32566:CDS | 50.0% | |
| CTTCCGCGAAACAAGTAGAC+GGG | + | chr5.1:62029618-62029637 | MS.gene32566:CDS | 50.0% | |
| GACAGCATGTGTCTCATCAC+AGG | + | chr5.1:62027726-62027745 | MS.gene32566:CDS | 50.0% | |
| GACTGAGGAATTGTGTTGCG+AGG | - | chr5.1:62026391-62026410 | None:intergenic | 50.0% | |
| GCGTTTGAACACCTCCTCAA+TGG | - | chr5.1:62028206-62028225 | None:intergenic | 50.0% | |
| GGCCATCTGTGCTCTTAACT+AGG | + | chr5.1:62028415-62028434 | MS.gene32566:intron | 50.0% | |
| GTGATGAGACACATGCTGTC+AGG | - | chr5.1:62027726-62027745 | None:intergenic | 50.0% | |
| TGAACAGGTCTTGGCCATTG+AGG | + | chr5.1:62028189-62028208 | MS.gene32566:intron | 50.0% | |
| TGATGACTATCTCCACCGTG+GGG | + | chr5.1:62029207-62029226 | MS.gene32566:CDS | 50.0% | |
| TTAACCTTACTGCACGAGGG+AGG | - | chr5.1:62029697-62029716 | None:intergenic | 50.0% | |
| TTGCAGTGCCTCAGGCATTT+AGG | + | chr5.1:62027062-62027081 | MS.gene32566:intron | 50.0% | |
| ! | CTGGAAAAGGGGGCTTTTCA+AGG | + | chr5.1:62027911-62027930 | MS.gene32566:CDS | 50.0% |
| ! | GTTAGGAGCATGTAGGCTGA+TGG | - | chr5.1:62029521-62029540 | None:intergenic | 50.0% |
| ! | TGAAAAGCCCCCTTTTCCAG+TGG | - | chr5.1:62027911-62027930 | None:intergenic | 50.0% |
| !! | TCTGGTTTGGCGTACACTAG+TGG | - | chr5.1:62030055-62030074 | None:intergenic | 50.0% |
| !! | TGAGGAGGTGTTCAAACGCA+GGG | + | chr5.1:62028207-62028226 | MS.gene32566:CDS | 50.0% |
| !! | TTGAGGAGGTGTTCAAACGC+AGG | + | chr5.1:62028206-62028225 | MS.gene32566:CDS | 50.0% |
| AAGCTGGATGGAAGGTCGGA+CGG | + | chr5.1:62027098-62027117 | MS.gene32566:CDS | 55.0% | |
| ACAGGTCTTGGCCATTGAGG+AGG | + | chr5.1:62028192-62028211 | MS.gene32566:intron | 55.0% | |
| CTGAGTTTCGCCGTCCTTAC+AGG | + | chr5.1:62029875-62029894 | MS.gene32566:CDS | 55.0% | |
| CTGGACGCAAATGCAGCTTG+TGG | + | chr5.1:62030078-62030097 | MS.gene32566:CDS | 55.0% | |
| GAGGAAGCTGGATGGAAGGT+CGG | + | chr5.1:62027094-62027113 | MS.gene32566:CDS | 55.0% | |
| GATGACTATCTCCACCGTGG+GGG | + | chr5.1:62029208-62029227 | MS.gene32566:CDS | 55.0% | |
| GCTTGAGGAAGCTGGATGGA+AGG | + | chr5.1:62027090-62027109 | MS.gene32566:CDS | 55.0% | |
| TGACACGACATTGACCCACG+TGG | + | chr5.1:62026915-62026934 | MS.gene32566:intron | 55.0% | |
| TGCATTTGCGTCCAGTCCTC+TGG | - | chr5.1:62030073-62030092 | None:intergenic | 55.0% | |
| TGCTTGCATTGCAGTGCCTC+AGG | + | chr5.1:62027054-62027073 | MS.gene32566:intron | 55.0% | |
| TGTACGCCAAACCAGAGGAC+TGG | + | chr5.1:62030059-62030078 | MS.gene32566:CDS | 55.0% | |
| TGTTCCTCCCTCGTGCAGTA+AGG | + | chr5.1:62029690-62029709 | MS.gene32566:intron | 55.0% | |
| TTGCGTCCAGTCCTCTGGTT+TGG | - | chr5.1:62030068-62030087 | None:intergenic | 55.0% | |
| TTGTCAGAGTCTGCGGCCAA+AGG | - | chr5.1:62030132-62030151 | None:intergenic | 55.0% | |
| TTTCATGCGGAGGAGGGACA+TGG | + | chr5.1:62028687-62028706 | MS.gene32566:intron | 55.0% | |
| ! | TGTATTTGGAACCCCCACGG+TGG | - | chr5.1:62029222-62029241 | None:intergenic | 55.0% |
| !!! | CTGCGGCCAAAGGTGTTTTC+TGG | - | chr5.1:62030122-62030141 | None:intergenic | 55.0% |
| AGAGCACAGATGGCCGTTGC+AGG | - | chr5.1:62028410-62028429 | None:intergenic | 60.0% | |
| ! | GTGCCCCAAGTACTGCCTTC+AGG | - | chr5.1:62028276-62028295 | None:intergenic | 60.0% |
| ! | GTGCGAGGGGCATGGAATAG+TGG | - | chr5.1:62026300-62026319 | None:intergenic | 60.0% |
| AAGGACGCACCACACGTGCG+AGG | - | chr5.1:62026315-62026334 | None:intergenic | 65.0% | |
| AGGACGCACCACACGTGCGA+GGG | - | chr5.1:62026314-62026333 | None:intergenic | 65.0% | |
| GAAATGGCGGCACGTGTGCG+AGG | - | chr5.1:62026340-62026359 | None:intergenic | 65.0% | |
| TTCCATGCCCCTCGCACGTG+TGG | + | chr5.1:62026303-62026322 | MS.gene32566:CDS | 65.0% | |
| CACCACACGTGCGAGGGGCA+TGG | - | chr5.1:62026308-62026327 | None:intergenic | 70.0% | |
| GCGGCACGTGTGCGAGGTGA+AGG | - | chr5.1:62026334-62026353 | None:intergenic | 70.0% | |
| GGACGCACCACACGTGCGAG+GGG | - | chr5.1:62026313-62026332 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 62026280 | 62030200 | 62026280 | ID=MS.gene32566 |
| chr5.1 | mRNA | 62026280 | 62030200 | 62026280 | ID=MS.gene32566.t1;Parent=MS.gene32566 |
| chr5.1 | exon | 62026280 | 62026471 | 62026280 | ID=MS.gene32566.t1.exon1;Parent=MS.gene32566.t1 |
| chr5.1 | CDS | 62026280 | 62026471 | 62026280 | ID=cds.MS.gene32566.t1;Parent=MS.gene32566.t1 |
| chr5.1 | exon | 62026591 | 62026666 | 62026591 | ID=MS.gene32566.t1.exon2;Parent=MS.gene32566.t1 |
| chr5.1 | CDS | 62026591 | 62026666 | 62026591 | ID=cds.MS.gene32566.t1;Parent=MS.gene32566.t1 |
| chr5.1 | exon | 62027068 | 62027165 | 62027068 | ID=MS.gene32566.t1.exon3;Parent=MS.gene32566.t1 |
| chr5.1 | CDS | 62027068 | 62027165 | 62027068 | ID=cds.MS.gene32566.t1;Parent=MS.gene32566.t1 |
| chr5.1 | exon | 62027646 | 62027747 | 62027646 | ID=MS.gene32566.t1.exon4;Parent=MS.gene32566.t1 |
| chr5.1 | CDS | 62027646 | 62027747 | 62027646 | ID=cds.MS.gene32566.t1;Parent=MS.gene32566.t1 |
| chr5.1 | exon | 62027877 | 62027963 | 62027877 | ID=MS.gene32566.t1.exon5;Parent=MS.gene32566.t1 |
| chr5.1 | CDS | 62027877 | 62027963 | 62027877 | ID=cds.MS.gene32566.t1;Parent=MS.gene32566.t1 |
| chr5.1 | exon | 62028196 | 62028312 | 62028196 | ID=MS.gene32566.t1.exon6;Parent=MS.gene32566.t1 |
| chr5.1 | CDS | 62028196 | 62028312 | 62028196 | ID=cds.MS.gene32566.t1;Parent=MS.gene32566.t1 |
| chr5.1 | exon | 62029185 | 62029288 | 62029185 | ID=MS.gene32566.t1.exon7;Parent=MS.gene32566.t1 |
| chr5.1 | CDS | 62029185 | 62029288 | 62029185 | ID=cds.MS.gene32566.t1;Parent=MS.gene32566.t1 |
| chr5.1 | exon | 62029525 | 62029664 | 62029525 | ID=MS.gene32566.t1.exon8;Parent=MS.gene32566.t1 |
| chr5.1 | CDS | 62029525 | 62029664 | 62029525 | ID=cds.MS.gene32566.t1;Parent=MS.gene32566.t1 |
| chr5.1 | exon | 62029767 | 62029903 | 62029767 | ID=MS.gene32566.t1.exon9;Parent=MS.gene32566.t1 |
| chr5.1 | CDS | 62029767 | 62029903 | 62029767 | ID=cds.MS.gene32566.t1;Parent=MS.gene32566.t1 |
| chr5.1 | exon | 62030012 | 62030200 | 62030012 | ID=MS.gene32566.t1.exon10;Parent=MS.gene32566.t1 |
| chr5.1 | CDS | 62030012 | 62030200 | 62030012 | ID=cds.MS.gene32566.t1;Parent=MS.gene32566.t1 |
| Gene Sequence |
| Protein sequence |
