Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33184.t1 | XP_013465800.1 | 99.5 | 381 | 2 | 0 | 1 | 381 | 1 | 381 | 1.10E-208 | 735.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33184.t1 | Q03730 | 32.2 | 376 | 228 | 9 | 5 | 372 | 12 | 368 | 2.3e-42 | 174.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33184.t1 | A0A072VDI4 | 99.5 | 381 | 2 | 0 | 1 | 381 | 1 | 381 | 7.7e-209 | 735.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049335 | MS.gene33184 | 0.850542 | 1.59E-60 | -1.69E-46 |
| MS.gene050904 | MS.gene33184 | -0.801809 | 7.56E-49 | -1.69E-46 |
| MS.gene051317 | MS.gene33184 | -0.800682 | 1.29E-48 | -1.69E-46 |
| MS.gene052606 | MS.gene33184 | 0.811883 | 5.60E-51 | -1.69E-46 |
| MS.gene05470 | MS.gene33184 | -0.801858 | 7.38E-49 | -1.69E-46 |
| MS.gene055748 | MS.gene33184 | -0.808018 | 3.81E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene33184 | -0.818982 | 1.48E-52 | -1.69E-46 |
| MS.gene05914 | MS.gene33184 | -0.820308 | 7.35E-53 | -1.69E-46 |
| MS.gene059526 | MS.gene33184 | 0.816825 | 4.53E-52 | -1.69E-46 |
| MS.gene05960 | MS.gene33184 | 0.802806 | 4.71E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene33184 | -0.802858 | 4.59E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33184.t1 | MTR_1g012790 | 99.475 | 381 | 2 | 0 | 1 | 381 | 1 | 381 | 0.0 | 767 |
| MS.gene33184.t1 | MTR_1g012790 | 99.333 | 300 | 2 | 0 | 82 | 381 | 1 | 300 | 0.0 | 601 |
| MS.gene33184.t1 | MTR_7g058520 | 28.989 | 376 | 226 | 13 | 26 | 371 | 34 | 398 | 1.38e-28 | 116 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33184.t1 | AT4G32140 | 73.657 | 391 | 89 | 6 | 5 | 381 | 4 | 394 | 0.0 | 559 |
| MS.gene33184.t1 | AT3G07080 | 26.980 | 404 | 245 | 11 | 5 | 371 | 7 | 397 | 8.89e-27 | 111 |
Find 92 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAAGCTGTTTGGATATAT+TGG | 0.204733 | 1.2:-8882526 | MS.gene33184:CDS |
| GTGTTCTCTCAGACTATTTC+TGG | 0.205885 | 1.2:-8882121 | MS.gene33184:intron |
| ACAAAGGAAATTGCTACTTA+TGG | 0.246035 | 1.2:-8883812 | MS.gene33184:CDS |
| TAGGTACTGTTGTTATCATC+TGG | 0.272041 | 1.2:-8885417 | MS.gene33184:CDS |
| ACTCCCCTTGTGGCCACTTT+GGG | 0.275531 | 1.2:-8881993 | MS.gene33184:CDS |
| ATGTCCTATGGTCTATTTAC+TGG | 0.282086 | 1.2:-8882686 | MS.gene33184:intron |
| CCTCCCAATAGCATTCATTA+AGG | 0.294336 | 1.2:-8884044 | MS.gene33184:CDS |
| AAGGCTGGGTTGTTTCTTAT+AGG | 0.299851 | 1.2:-8885436 | MS.gene33184:CDS |
| CAATCCTTAATGAATGCTAT+TGG | 0.302206 | 1.2:+8884040 | None:intergenic |
| TTGTGTTAACAGGTATTTGC+TGG | 0.303613 | 1.2:-8881310 | MS.gene33184:intron |
| AACTCCCCTTGTGGCCACTT+TGG | 0.318536 | 1.2:-8881994 | MS.gene33184:CDS |
| TAAATATAATGAAACTAGTT+TGG | 0.358884 | 1.2:-8883858 | MS.gene33184:CDS |
| GCTGTCTTGGTCAGCATGAC+CGG | 0.385354 | 1.2:-8883514 | MS.gene33184:CDS |
| GCATGTATAATGCTGAATAA+TGG | 0.388353 | 1.2:+8881916 | None:intergenic |
| CACTATTCCTCTTGCTATGA+TGG | 0.389037 | 1.2:-8881961 | MS.gene33184:CDS |
| CTGTCTTGGTCAGCATGACC+GGG | 0.400569 | 1.2:-8883513 | MS.gene33184:CDS |
| GATATAGACCTTTCAACTCT+TGG | 0.402976 | 1.2:-8883902 | MS.gene33184:CDS |
| CCAGGGCACTCTGCGTTGTA+TGG | 0.405849 | 1.2:-8882019 | MS.gene33184:intron |
| CGATTATAAGCAGCCATTTG+TGG | 0.406777 | 1.2:-8884101 | MS.gene33184:CDS |
| AGATTGGGCGACAAAGAGAT+TGG | 0.407802 | 1.2:-8881266 | MS.gene33184:CDS |
| AAGAACCACTTCATCCATTC+TGG | 0.413869 | 1.2:+8882163 | None:intergenic |
| CACAAATGGCTGCTTATAAT+CGG | 0.418029 | 1.2:+8884102 | None:intergenic |
| AATCCTTAATGAATGCTATT+GGG | 0.420479 | 1.2:+8884041 | None:intergenic |
| ACAGTATTGTCATCTACTTC+AGG | 0.423690 | 1.2:-8883601 | MS.gene33184:CDS |
| GTTGACGTGCAAAAGCTGTT+TGG | 0.432446 | 1.2:-8882535 | MS.gene33184:CDS |
| CGGGGTTGCCATGACAACTC+TGG | 0.432955 | 1.2:-8883494 | MS.gene33184:CDS |
| GATAGCAAATCTTTCAGATT+GGG | 0.433970 | 1.2:-8881281 | MS.gene33184:CDS |
| ATCAAAAGTAGTTGCTGTCT+TGG | 0.435118 | 1.2:-8883527 | MS.gene33184:CDS |
| CCGAGATATGTCACCACAAA+TGG | 0.437294 | 1.2:+8884088 | None:intergenic |
| CTTCTTTCAGCCATGTCCTA+TGG | 0.438314 | 1.2:-8882698 | MS.gene33184:CDS |
| AATGGACAGCGCTCTCTTGT+TGG | 0.443121 | 1.2:-8882734 | MS.gene33184:CDS |
| TTCTGGCGAAGAAGGTGAAC+GGG | 0.443641 | 1.2:-8882557 | MS.gene33184:CDS |
| TATTCAGCATTATACATGCT+TGG | 0.446661 | 1.2:-8881912 | MS.gene33184:CDS |
| TGATAGCAAATCTTTCAGAT+TGG | 0.460487 | 1.2:-8881282 | MS.gene33184:CDS |
| TGACAACTCTGGGCAAGACT+TGG | 0.464560 | 1.2:-8883483 | MS.gene33184:CDS |
| GTTCTTGCAAATGGACTTGT+TGG | 0.469958 | 1.2:-8882146 | MS.gene33184:CDS |
| AGGTACTGTTGTTATCATCT+GGG | 0.471977 | 1.2:-8885416 | MS.gene33184:CDS |
| TTGCTCAGTCTGGCCATTGT+CGG | 0.472274 | 1.2:-8882225 | MS.gene33184:intron |
| CAATAGCATTCATTAAGGAT+TGG | 0.479937 | 1.2:-8884039 | MS.gene33184:CDS |
| AATGCAGAAAGACTTTGAAA+TGG | 0.481429 | 1.2:-8883954 | MS.gene33184:CDS |
| TCTATAACTTTCTTAAACAC+CGG | 0.481506 | 1.2:-8884015 | MS.gene33184:CDS |
| GATTGGGCGACAAAGAGATT+GGG | 0.489020 | 1.2:-8881265 | MS.gene33184:CDS |
| AAACTTAGGTTCAATTCCTA+AGG | 0.495621 | 1.2:+8882202 | None:intergenic |
| TGTTTACACTTGTAGCGCTA+TGG | 0.496686 | 1.2:-8882501 | MS.gene33184:CDS |
| CCATTTGTGGTGACATATCT+CGG | 0.499618 | 1.2:-8884088 | MS.gene33184:CDS |
| GTCTGGCCATTGTCGGCCTT+AGG | 0.506848 | 1.2:-8882218 | MS.gene33184:CDS |
| TGTGTTAACAGGTATTTGCT+GGG | 0.511890 | 1.2:-8881309 | MS.gene33184:intron |
| GATGAAGTGGTTCTTGCAAA+TGG | 0.516520 | 1.2:-8882155 | MS.gene33184:CDS |
| GAGTGCGGAATCGCAAACTT+AGG | 0.519656 | 1.2:+8882188 | None:intergenic |
| AAAGACTTTGAAATGGAACT+AGG | 0.520018 | 1.2:-8883947 | MS.gene33184:CDS |
| GACAACTCTGGGCAAGACTT+GGG | 0.523756 | 1.2:-8883482 | MS.gene33184:CDS |
| GGGGTTGCCATGACAACTCT+GGG | 0.526807 | 1.2:-8883493 | MS.gene33184:CDS |
| ATACATGCTTGGATCAGCTC+AGG | 0.536294 | 1.2:-8881901 | MS.gene33184:intron |
| AATGGGTAGTTTGAGATACA+AGG | 0.538250 | 1.2:-8885455 | MS.gene33184:CDS |
| AAACACCGGTCTTCTAAAAG+TGG | 0.541403 | 1.2:-8884001 | MS.gene33184:CDS |
| TCATTATATTTAGCCACCAA+TGG | 0.542103 | 1.2:+8883869 | None:intergenic |
| TCTTGGAGAGATAGCACCAT+TGG | 0.547273 | 1.2:-8883885 | MS.gene33184:CDS |
| CATAGGACATGGCTGAAAGA+AGG | 0.549347 | 1.2:+8882699 | None:intergenic |
| ACCTCTGTTATAAACCAGAT+AGG | 0.552608 | 1.2:+8883776 | None:intergenic |
| CTCTGCCAGAATGGATGAAG+TGG | 0.556106 | 1.2:-8882168 | MS.gene33184:CDS |
| TCTTGCTATGATGGCTGACA+TGG | 0.559140 | 1.2:-8881952 | MS.gene33184:CDS |
| AAGACTTTGAAATGGAACTA+GGG | 0.560811 | 1.2:-8883946 | MS.gene33184:CDS |
| GGTAGTTTGAGATACAAGGC+TGG | 0.567672 | 1.2:-8885451 | MS.gene33184:CDS |
| GATTCCGCACTCTGCCAGAA+TGG | 0.568923 | 1.2:-8882177 | MS.gene33184:CDS |
| ATGCTGAATAATGGCGACCA+TGG | 0.574214 | 1.2:+8881925 | None:intergenic |
| AGTCTTGCCCAGAGTTGTCA+TGG | 0.578695 | 1.2:+8883486 | None:intergenic |
| TGAAATGGAACTAGGGAATG+TGG | 0.579208 | 1.2:-8883939 | MS.gene33184:CDS |
| ACATGCCCAAAGTGGCCACA+AGG | 0.585445 | 1.2:+8881988 | None:intergenic |
| TAATGAAACTAGTTTGGCAA+AGG | 0.593482 | 1.2:-8883852 | MS.gene33184:CDS |
| TGGAGAGATAGCACCATTGG+TGG | 0.594581 | 1.2:-8883882 | MS.gene33184:CDS |
| TTTCTGGCGAAGAAGGTGAA+CGG | 0.596044 | 1.2:-8882558 | MS.gene33184:CDS |
| CTATCTCTCCAAGAGTTGAA+AGG | 0.601207 | 1.2:+8883894 | None:intergenic |
| ATATCTCGGAGCTTCTCTCA+TGG | 0.603748 | 1.2:-8884074 | MS.gene33184:CDS |
| ATGTCAGCCATCATAGCAAG+AGG | 0.609091 | 1.2:+8881954 | None:intergenic |
| ACCTATCTGGTTTATAACAG+AGG | 0.609256 | 1.2:-8883777 | MS.gene33184:intron |
| CTAACCAGTAAATAGACCAT+AGG | 0.614259 | 1.2:+8882682 | None:intergenic |
| CTCCTCTGCTGAAGTCACCC+AGG | 0.614844 | 1.2:-8885392 | MS.gene33184:intron |
| ATTAAATTGCGAGTCATCTG+CGG | 0.615941 | 1.2:+8883459 | None:intergenic |
| TTACACTTGTAGCGCTATGG+TGG | 0.616387 | 1.2:-8882498 | MS.gene33184:CDS |
| CAGAGTTGTCATGGCAACCC+CGG | 0.616550 | 1.2:+8883495 | None:intergenic |
| ATGCCCAAAGTGGCCACAAG+GGG | 0.623395 | 1.2:+8881990 | None:intergenic |
| CATGCCCAAAGTGGCCACAA+GGG | 0.624135 | 1.2:+8881989 | None:intergenic |
| GTAGTTTGAGATACAAGGCT+GGG | 0.626160 | 1.2:-8885450 | MS.gene33184:CDS |
| TCAATTCCTAAGGCCGACAA+TGG | 0.628466 | 1.2:+8882212 | None:intergenic |
| AGTGAGTGACATGCCCAAAG+TGG | 0.633604 | 1.2:+8881980 | None:intergenic |
| TGTATGGACAACTCCCCTTG+TGG | 0.639896 | 1.2:-8882003 | MS.gene33184:CDS |
| TACCTGGGTGACTTCAGCAG+AGG | 0.640381 | 1.2:+8885390 | None:intergenic |
| CCTTAATGAATGCTATTGGG+AGG | 0.648867 | 1.2:+8884044 | None:intergenic |
| TCATCCATTCTGGCAGAGTG+CGG | 0.658428 | 1.2:+8882173 | None:intergenic |
| AGTAAATAGACCATAGGACA+TGG | 0.668086 | 1.2:+8882688 | None:intergenic |
| ATGGCTGACATGGTAATCCA+TGG | 0.681409 | 1.2:-8881942 | MS.gene33184:CDS |
| TGTCTTGGTCAGCATGACCG+GGG | 0.713176 | 1.2:-8883512 | MS.gene33184:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTAAATAATTTTACATCA+TGG | + | chr1.2:8881368-8881387 | None:intergenic | 10.0% |
| !!! | GTTTTTTTGTTATATTTTTT+AGG | - | chr1.2:8881446-8881465 | MS.gene33184:intron | 10.0% |
| !!! | TCAATTTTTTTTTTTAAACT+CGG | - | chr1.2:8881665-8881684 | MS.gene33184:intron | 10.0% |
| !! | AAAAAAAAAAATTTACCTCT+TGG | - | chr1.2:8884958-8884977 | MS.gene33184:intron | 15.0% |
| !! | TAAATATAATGAAACTAGTT+TGG | - | chr1.2:8882854-8882873 | MS.gene33184:intron | 15.0% |
| !! | TTAATTATGTCATAGTATAT+AGG | - | chr1.2:8881515-8881534 | MS.gene33184:intron | 15.0% |
| !! | TTGAAAAAAAATCAAAGTAT+AGG | + | chr1.2:8883662-8883681 | None:intergenic | 15.0% |
| !!! | ATTTAATTTTCTCATAAGTT+TGG | - | chr1.2:8881380-8881399 | MS.gene33184:intron | 15.0% |
| !!! | TCTTTGTAATACTATTTTTT+GGG | - | chr1.2:8883928-8883947 | MS.gene33184:CDS | 15.0% |
| !! | AAAAGATGAAAAATTTACCT+GGG | + | chr1.2:8881340-8881359 | None:intergenic | 20.0% |
| !! | AAAGAACTTATTGTTTACAT+TGG | + | chr1.2:8882122-8882141 | None:intergenic | 20.0% |
| !! | TAAAAGGAATTCAACAATAT+TGG | - | chr1.2:8883574-8883593 | MS.gene33184:CDS | 20.0% |
| !! | TAATTGTACAACAATCATTT+AGG | - | chr1.2:8881551-8881570 | MS.gene33184:intron | 20.0% |
| !! | TCAATTCAATTTAATGATTG+TGG | - | chr1.2:8881489-8881508 | MS.gene33184:intron | 20.0% |
| !! | TTGTTGTACAATTAACAATA+AGG | + | chr1.2:8881545-8881564 | None:intergenic | 20.0% |
| !!! | AGTTTGTGTTTTTTCTATAA+AGG | - | chr1.2:8881933-8881952 | MS.gene33184:CDS | 20.0% |
| !!! | CATTTTCTTTAAATTATTGC+TGG | - | chr1.2:8885094-8885113 | MS.gene33184:intron | 20.0% |
| !!! | CTCTTTGTAATACTATTTTT+TGG | - | chr1.2:8883927-8883946 | MS.gene33184:CDS | 20.0% |
| !!! | TAGGTGGAAATATTTTTAAA+AGG | - | chr1.2:8883558-8883577 | MS.gene33184:CDS | 20.0% |
| !!! | TGTATCTTTGTTATTTATTC+TGG | - | chr1.2:8882982-8883001 | MS.gene33184:intron | 20.0% |
| ! | AACAATATTGGATACTTTCT+TGG | - | chr1.2:8883586-8883605 | MS.gene33184:CDS | 25.0% |
| ! | AATCCTTAATGAATGCTATT+GGG | + | chr1.2:8882674-8882693 | None:intergenic | 25.0% |
| ! | ACAAAGGGATCAATTATATT+AGG | + | chr1.2:8883726-8883745 | None:intergenic | 25.0% |
| ! | ACAATATTGGATACTTTCTT+GGG | - | chr1.2:8883587-8883606 | MS.gene33184:CDS | 25.0% |
| ! | ACATCATATAGGAAATGTAA+TGG | - | chr1.2:8883011-8883030 | MS.gene33184:intron | 25.0% |
| ! | AGAAAAAGAACTTACTACAA+AGG | - | chr1.2:8882884-8882903 | MS.gene33184:intron | 25.0% |
| ! | AGTTATGGTGCAAAATATTA+AGG | - | chr1.2:8883866-8883885 | MS.gene33184:CDS | 25.0% |
| ! | ATAGAATAACGAAGCTAATT+TGG | + | chr1.2:8883310-8883329 | None:intergenic | 25.0% |
| ! | ATATAATTGATCCCTTTGTA+TGG | - | chr1.2:8883727-8883746 | MS.gene33184:intron | 25.0% |
| ! | ATCAGAATTTCAAATTGCAA+TGG | + | chr1.2:8882484-8882503 | None:intergenic | 25.0% |
| ! | ATCGATTGACATCTTAAAAT+TGG | + | chr1.2:8883334-8883353 | None:intergenic | 25.0% |
| ! | ATTAACATGCATAAAGTCAA+AGG | + | chr1.2:8885218-8885237 | None:intergenic | 25.0% |
| ! | ATTATGTCATAGTATATAGG+AGG | - | chr1.2:8881518-8881537 | MS.gene33184:intron | 25.0% |
| ! | CAAAGGGATCAATTATATTA+GGG | + | chr1.2:8883725-8883744 | None:intergenic | 25.0% |
| ! | CATTATTCATCTAGATTATC+TGG | + | chr1.2:8884093-8884112 | None:intergenic | 25.0% |
| ! | GAAAAGATGAAAAATTTACC+TGG | + | chr1.2:8881341-8881360 | None:intergenic | 25.0% |
| ! | GGATACTTCTTAGTAATAAT+TGG | - | chr1.2:8882081-8882100 | MS.gene33184:intron | 25.0% |
| ! | TAACATATGAATCGTTGAAA+CGG | + | chr1.2:8885155-8885174 | None:intergenic | 25.0% |
| ! | TACTTCTTAGTAATAATTGG+AGG | - | chr1.2:8882084-8882103 | MS.gene33184:intron | 25.0% |
| ! | TATTAGGGATATAGTCATAT+AGG | + | chr1.2:8883710-8883729 | None:intergenic | 25.0% |
| ! | TCTATAACTTTCTTAAACAC+CGG | - | chr1.2:8882697-8882716 | MS.gene33184:CDS | 25.0% |
| ! | TGTATTAATATACTCATGTG+AGG | + | chr1.2:8883776-8883795 | None:intergenic | 25.0% |
| ! | TTATATATAATATGCCACTG+CGG | - | chr1.2:8882273-8882292 | MS.gene33184:intron | 25.0% |
| !! | AATTTGAAATTCTGATCAAG+TGG | - | chr1.2:8882488-8882507 | MS.gene33184:intron | 25.0% |
| !! | ACATATTGATGGAATTGTTT+TGG | - | chr1.2:8885377-8885396 | MS.gene33184:intron | 25.0% |
| !! | ATTATGTTGATAGAGATAGA+GGG | - | chr1.2:8883806-8883825 | MS.gene33184:CDS | 25.0% |
| !! | GTTCTTCTTAAAAAGTTTTC+TGG | - | chr1.2:8884138-8884157 | MS.gene33184:intron | 25.0% |
| !!! | CATAGCTAATGTTTTAGTTA+TGG | - | chr1.2:8883851-8883870 | MS.gene33184:CDS | 25.0% |
| AAACACAAAAACCAAGTTAG+AGG | + | chr1.2:8884321-8884340 | None:intergenic | 30.0% | |
| AAACTTAGGTTCAATTCCTA+AGG | + | chr1.2:8884513-8884532 | None:intergenic | 30.0% | |
| ACAAAACATTTAACACCAAG+AGG | + | chr1.2:8884976-8884995 | None:intergenic | 30.0% | |
| ACATCAAACATGCATTCAAT+AGG | + | chr1.2:8885031-8885050 | None:intergenic | 30.0% | |
| ATAAGTTATCCTAACATCGA+TGG | + | chr1.2:8885004-8885023 | None:intergenic | 30.0% | |
| ATCATTCATGATACAAAGCT+TGG | + | chr1.2:8882554-8882573 | None:intergenic | 30.0% | |
| ATTAATATACTCATGTGAGG+AGG | + | chr1.2:8883773-8883792 | None:intergenic | 30.0% | |
| CAAAAGCTGTTTGGATATAT+TGG | - | chr1.2:8884186-8884205 | MS.gene33184:intron | 30.0% | |
| CAACTTATGCAACATATAAC+TGG | + | chr1.2:8882311-8882330 | None:intergenic | 30.0% | |
| CAATAGCATTCATTAAGGAT+TGG | - | chr1.2:8882673-8882692 | MS.gene33184:intron | 30.0% | |
| CAATCCTTAATGAATGCTAT+TGG | + | chr1.2:8882675-8882694 | None:intergenic | 30.0% | |
| CTCTATCTCTATCAACATAA+TGG | + | chr1.2:8883807-8883826 | None:intergenic | 30.0% | |
| GATAGCAAATCTTTCAGATT+GGG | - | chr1.2:8885431-8885450 | MS.gene33184:CDS | 30.0% | |
| GCATGTATAATGCTGAATAA+TGG | + | chr1.2:8884799-8884818 | None:intergenic | 30.0% | |
| TAATCTAGACGAAATTTCCT+AGG | + | chr1.2:8885286-8885305 | None:intergenic | 30.0% | |
| TATAGGTATCTGACAAGTAT+CGG | + | chr1.2:8883645-8883664 | None:intergenic | 30.0% | |
| TATTCAGCATTATACATGCT+TGG | - | chr1.2:8884800-8884819 | MS.gene33184:intron | 30.0% | |
| TCATTATATTTAGCCACCAA+TGG | + | chr1.2:8882846-8882865 | None:intergenic | 30.0% | |
| TCCTTTAAATCAAAGCAATG+AGG | + | chr1.2:8882238-8882257 | None:intergenic | 30.0% | |
| TCTGGTATATGACATCATAT+AGG | - | chr1.2:8883000-8883019 | MS.gene33184:intron | 30.0% | |
| TGATAGCAAATCTTTCAGAT+TGG | - | chr1.2:8885430-8885449 | MS.gene33184:CDS | 30.0% | |
| TTAATAGCCAGTTGACAATA+TGG | + | chr1.2:8885311-8885330 | None:intergenic | 30.0% | |
| TTGATATTTGTGTTCAGCAA+TGG | - | chr1.2:8883960-8883979 | MS.gene33184:CDS | 30.0% | |
| ! | AAGATGTATCTGAGAAGTAT+AGG | - | chr1.2:8883539-8883558 | MS.gene33184:CDS | 30.0% |
| ! | AATGCAGAAAGACTTTGAAA+TGG | - | chr1.2:8882758-8882777 | MS.gene33184:intron | 30.0% |
| ! | ACAAAGGAAATTGCTACTTA+TGG | - | chr1.2:8882900-8882919 | MS.gene33184:intron | 30.0% |
| ! | CATTATGTTGATAGAGATAG+AGG | - | chr1.2:8883805-8883824 | MS.gene33184:CDS | 30.0% |
| ! | CTTTTCATTGGTGTGTTAAT+GGG | - | chr1.2:8883144-8883163 | MS.gene33184:intron | 30.0% |
| ! | GATCAAGTGGTATCTTTTAT+TGG | - | chr1.2:8882501-8882520 | MS.gene33184:CDS | 30.0% |
| ! | GGCTAAGAATGATTTAGTTT+AGG | - | chr1.2:8881980-8881999 | MS.gene33184:CDS | 30.0% |
| ! | TAATGAAACTAGTTTGGCAA+AGG | - | chr1.2:8882860-8882879 | MS.gene33184:intron | 30.0% |
| ! | TCAATTAAAATTTTCTGCGC+AGG | - | chr1.2:8882578-8882597 | MS.gene33184:intron | 30.0% |
| ! | TCCTCATTGCTTTGATTTAA+AGG | - | chr1.2:8882234-8882253 | MS.gene33184:intron | 30.0% |
| ! | TCTTTTCATTGGTGTGTTAA+TGG | - | chr1.2:8883143-8883162 | MS.gene33184:intron | 30.0% |
| !! | AAAGACTTTGAAATGGAACT+AGG | - | chr1.2:8882765-8882784 | MS.gene33184:intron | 30.0% |
| !! | AAGACTTTGAAATGGAACTA+GGG | - | chr1.2:8882766-8882785 | MS.gene33184:intron | 30.0% |
| !! | ACAATAAGTTCTTTTGAGAG+AGG | - | chr1.2:8882128-8882147 | MS.gene33184:CDS | 30.0% |
| !! | GTGTTTTGTTGACATATTGA+TGG | - | chr1.2:8885366-8885385 | MS.gene33184:intron | 30.0% |
| !! | TGTCAATCGATTTTTCTAGT+AGG | - | chr1.2:8883343-8883362 | MS.gene33184:intron | 30.0% |
| !! | TTTTTCCACTTTTAGAAGAC+CGG | + | chr1.2:8882719-8882738 | None:intergenic | 30.0% |
| !!! | CTTGGTGTTAAATGTTTTGT+TGG | - | chr1.2:8884976-8884995 | MS.gene33184:intron | 30.0% |
| !!! | TTTTTTCTTTTTGCTCAGTC+TGG | - | chr1.2:8884477-8884496 | MS.gene33184:intron | 30.0% |
| AAGAAAATGATTGAAACCCC+CGG | + | chr1.2:8881895-8881914 | None:intergenic | 35.0% | |
| ACAACAATCATTTAGGAAGC+TGG | - | chr1.2:8881558-8881577 | MS.gene33184:intron | 35.0% | |
| ACAGTATTGTCATCTACTTC+AGG | - | chr1.2:8883111-8883130 | MS.gene33184:intron | 35.0% | |
| ACCTCTGTTATAAACCAGAT+AGG | + | chr1.2:8882939-8882958 | None:intergenic | 35.0% | |
| AGTAAATAGACCATAGGACA+TGG | + | chr1.2:8884027-8884046 | None:intergenic | 35.0% | |
| AGTGGAAAAAATGCAGAAAG+CGG | - | chr1.2:8882729-8882748 | MS.gene33184:CDS | 35.0% | |
| AGTTAGAGGAGCAAATGAAA+AGG | + | chr1.2:8884307-8884326 | None:intergenic | 35.0% | |
| AGTTTGTAACAGTAGCCAAT+CGG | - | chr1.2:8884882-8884901 | MS.gene33184:intron | 35.0% | |
| ATCAAAAGTAGTTGCTGTCT+TGG | - | chr1.2:8883185-8883204 | MS.gene33184:intron | 35.0% | |
| ATGTCCTATGGTCTATTTAC+TGG | - | chr1.2:8884026-8884045 | MS.gene33184:CDS | 35.0% | |
| ATTAAATTGCGAGTCATCTG+CGG | + | chr1.2:8883256-8883275 | None:intergenic | 35.0% | |
| ATTAAGGACCGACTAATCTA+GGG | - | chr1.2:8881695-8881714 | MS.gene33184:intron | 35.0% | |
| CACAAATGGCTGCTTATAAT+CGG | + | chr1.2:8882613-8882632 | None:intergenic | 35.0% | |
| CTAACCAGTAAATAGACCAT+AGG | + | chr1.2:8884033-8884052 | None:intergenic | 35.0% | |
| GATATAGACCTTTCAACTCT+TGG | - | chr1.2:8882810-8882829 | MS.gene33184:intron | 35.0% | |
| GATTAGACCATATTGTCAAC+TGG | - | chr1.2:8885301-8885320 | MS.gene33184:intron | 35.0% | |
| GCAACATATAACTGGAACAA+TGG | + | chr1.2:8882303-8882322 | None:intergenic | 35.0% | |
| GGTCATCAAAGAGATAGAAA+GGG | + | chr1.2:8883289-8883308 | None:intergenic | 35.0% | |
| GTAATCCTGTTCAAGACTAA+CGG | + | chr1.2:8882170-8882189 | None:intergenic | 35.0% | |
| GTGATCATATAAGTCGAGTT+TGG | + | chr1.2:8884281-8884300 | None:intergenic | 35.0% | |
| TAAACTCGGTATCCAGATTA+AGG | - | chr1.2:8881679-8881698 | MS.gene33184:intron | 35.0% | |
| TATTAGCACACTGCATGATA+TGG | + | chr1.2:8882530-8882549 | None:intergenic | 35.0% | |
| TCAATGTGATGCCATACAAA+GGG | + | chr1.2:8883741-8883760 | None:intergenic | 35.0% | |
| TCCAATAAGCCAATCTCATT+GGG | + | chr1.2:8882024-8882043 | None:intergenic | 35.0% | |
| TCTAAGTCCTTATCTAAGCA+CGG | - | chr1.2:8882434-8882453 | MS.gene33184:intron | 35.0% | |
| TGGTCATCAAAGAGATAGAA+AGG | + | chr1.2:8883290-8883309 | None:intergenic | 35.0% | |
| TGTGTTAACAGGTATTTGCT+GGG | - | chr1.2:8885403-8885422 | MS.gene33184:CDS | 35.0% | |
| TTAGTAATAATTGGAGGTCC+TGG | - | chr1.2:8882090-8882109 | MS.gene33184:intron | 35.0% | |
| TTCAATGTGATGCCATACAA+AGG | + | chr1.2:8883742-8883761 | None:intergenic | 35.0% | |
| TTCCAATAAGCCAATCTCAT+TGG | + | chr1.2:8882025-8882044 | None:intergenic | 35.0% | |
| TTGAATGCATGTTTGATGTC+TGG | - | chr1.2:8885032-8885051 | MS.gene33184:intron | 35.0% | |
| TTGCTTCATGTGACTTGATT+TGG | - | chr1.2:8881615-8881634 | MS.gene33184:intron | 35.0% | |
| TTGTGTTAACAGGTATTTGC+TGG | - | chr1.2:8885402-8885421 | MS.gene33184:CDS | 35.0% | |
| TTTCATTTGCTCCTCTAACT+TGG | - | chr1.2:8884307-8884326 | MS.gene33184:intron | 35.0% | |
| ! | ACCTATCTGGTTTATAACAG+AGG | - | chr1.2:8882935-8882954 | MS.gene33184:intron | 35.0% |
| ! | AGATAGAGGGTATAAGAGAA+AGG | - | chr1.2:8883819-8883838 | MS.gene33184:CDS | 35.0% |
| ! | AGGTACTGTTGTTATCATCT+GGG | - | chr1.2:8881296-8881315 | MS.gene33184:CDS | 35.0% |
| ! | ATGTATCTGAGAAGTATAGG+TGG | - | chr1.2:8883542-8883561 | MS.gene33184:CDS | 35.0% |
| ! | GATTTTACATTGCACCTATC+TGG | - | chr1.2:8882922-8882941 | MS.gene33184:intron | 35.0% |
| ! | TAGGTACTGTTGTTATCATC+TGG | - | chr1.2:8881295-8881314 | MS.gene33184:CDS | 35.0% |
| ! | TCTCTTGTTGGAGATCTTTT+TGG | - | chr1.2:8883990-8884009 | MS.gene33184:CDS | 35.0% |
| ! | TTTTCTATAAAGGTCGTGTG+AGG | - | chr1.2:8881943-8881962 | MS.gene33184:CDS | 35.0% |
| !! | AAAAAGTTTTCTGGCGAAGA+AGG | - | chr1.2:8884147-8884166 | MS.gene33184:intron | 35.0% |
| !!! | TGTTTTGGCATTGTGTTAAC+AGG | - | chr1.2:8885392-8885411 | MS.gene33184:intron | 35.0% |
| AAAAATGCAGAAAGCGGCAA+TGG | - | chr1.2:8882735-8882754 | MS.gene33184:CDS | 40.0% | |
| AAATCCCACTGTCTACTAGT+GGG | - | chr1.2:8881721-8881740 | MS.gene33184:intron | 40.0% | |
| AAGAACCACTTCATCCATTC+TGG | + | chr1.2:8884552-8884571 | None:intergenic | 40.0% | |
| AAGCTGGTGTATTTGAGAGA+GGG | - | chr1.2:8881574-8881593 | MS.gene33184:intron | 40.0% | |
| AAGTGGAGAGGATGTGTATA+AGG | - | chr1.2:8882060-8882079 | MS.gene33184:intron | 40.0% | |
| AATTTATGTGTTGGGCGAGA+CGG | + | chr1.2:8881786-8881805 | None:intergenic | 40.0% | |
| ACACATAAATTGTTGGCGCT+TGG | - | chr1.2:8881795-8881814 | MS.gene33184:intron | 40.0% | |
| ACACTGTTGTCTAAGCTTGA+AGG | - | chr1.2:8882360-8882379 | MS.gene33184:intron | 40.0% | |
| ACATAAATTGTTGGCGCTTG+GGG | - | chr1.2:8881797-8881816 | MS.gene33184:intron | 40.0% | |
| ACCTAATGACCCAATGAGAT+TGG | - | chr1.2:8882012-8882031 | MS.gene33184:CDS | 40.0% | |
| AGAAAATGATTGAAACCCCC+GGG | + | chr1.2:8881894-8881913 | None:intergenic | 40.0% | |
| AGCGCCAACAATTTATGTGT+TGG | + | chr1.2:8881795-8881814 | None:intergenic | 40.0% | |
| ATGTTTGTAAACCAGCTCAG+AGG | + | chr1.2:8883393-8883412 | None:intergenic | 40.0% | |
| CACAGATATCATCCTACCAA+AGG | + | chr1.2:8882192-8882211 | None:intergenic | 40.0% | |
| CACATAAATTGTTGGCGCTT+GGG | - | chr1.2:8881796-8881815 | MS.gene33184:intron | 40.0% | |
| CCATTTGTGGTGACATATCT+CGG | - | chr1.2:8882624-8882643 | MS.gene33184:intron | 40.0% | |
| CCTCCCAATAGCATTCATTA+AGG | - | chr1.2:8882668-8882687 | MS.gene33184:intron | 40.0% | |
| CCTTAATGAATGCTATTGGG+AGG | + | chr1.2:8882671-8882690 | None:intergenic | 40.0% | |
| CGATTATAAGCAGCCATTTG+TGG | - | chr1.2:8882611-8882630 | MS.gene33184:intron | 40.0% | |
| CTATCTCTCCAAGAGTTGAA+AGG | + | chr1.2:8882821-8882840 | None:intergenic | 40.0% | |
| CTTTGGTAGGATGATATCTG+TGG | - | chr1.2:8882190-8882209 | MS.gene33184:CDS | 40.0% | |
| GAATCGTTGAAACGGACATT+GGG | + | chr1.2:8885147-8885166 | None:intergenic | 40.0% | |
| GATGAAGTGGTTCTTGCAAA+TGG | - | chr1.2:8884557-8884576 | MS.gene33184:intron | 40.0% | |
| GATTAAGGACCGACTAATCT+AGG | - | chr1.2:8881694-8881713 | MS.gene33184:intron | 40.0% | |
| GATTTGTCCCCTAGATTAGT+CGG | + | chr1.2:8881706-8881725 | None:intergenic | 40.0% | |
| GCGCCAACAATTTATGTGTT+GGG | + | chr1.2:8881794-8881813 | None:intergenic | 40.0% | |
| GTCTTACATATGTAGACCAG+AGG | - | chr1.2:8882337-8882356 | MS.gene33184:intron | 40.0% | |
| GTCTTGAACAGGATTACCTT+TGG | - | chr1.2:8882173-8882192 | MS.gene33184:CDS | 40.0% | |
| GTGTTCTCTCAGACTATTTC+TGG | - | chr1.2:8884591-8884610 | MS.gene33184:intron | 40.0% | |
| TCAAGACTAACGGAGCAAAA+GGG | + | chr1.2:8882160-8882179 | None:intergenic | 40.0% | |
| TCGCCCAACACATAAATTGT+TGG | - | chr1.2:8881788-8881807 | MS.gene33184:intron | 40.0% | |
| TGAAAGAAAGATCCTCCGAT+TGG | + | chr1.2:8884900-8884919 | None:intergenic | 40.0% | |
| TGAAATGGAACTAGGGAATG+TGG | - | chr1.2:8882773-8882792 | MS.gene33184:intron | 40.0% | |
| TGAACAGGATTACCTTTGGT+AGG | - | chr1.2:8882177-8882196 | MS.gene33184:CDS | 40.0% | |
| TGAATCGTTGAAACGGACAT+TGG | + | chr1.2:8885148-8885167 | None:intergenic | 40.0% | |
| TGTATTTGAGAGAGGGATGT+AGG | - | chr1.2:8881581-8881600 | MS.gene33184:intron | 40.0% | |
| TGTTTACACTTGTAGCGCTA+TGG | - | chr1.2:8884211-8884230 | MS.gene33184:intron | 40.0% | |
| TGTTTACATTGGATCGAACC+AGG | + | chr1.2:8882111-8882130 | None:intergenic | 40.0% | |
| TGTTTGTAAACCAGCTCAGA+GGG | + | chr1.2:8883392-8883411 | None:intergenic | 40.0% | |
| TTAAGGACCGACTAATCTAG+GGG | - | chr1.2:8881696-8881715 | MS.gene33184:intron | 40.0% | |
| TTCAAGACTAACGGAGCAAA+AGG | + | chr1.2:8882161-8882180 | None:intergenic | 40.0% | |
| TTTACTTGATCTACCACCCA+GGG | - | chr1.2:8884676-8884695 | MS.gene33184:intron | 40.0% | |
| TTTGGTAAGTGTCATAGCCT+AGG | - | chr1.2:8885266-8885285 | MS.gene33184:intron | 40.0% | |
| ! | AAACACCGGTCTTCTAAAAG+TGG | - | chr1.2:8882711-8882730 | MS.gene33184:CDS | 40.0% |
| ! | AGATTAGTCGGTCCTTAATC+TGG | + | chr1.2:8881694-8881713 | None:intergenic | 40.0% |
| ! | AGCAATGAGGACTGCATTTT+TGG | + | chr1.2:8882225-8882244 | None:intergenic | 40.0% |
| ! | CAATGAGGACTGCATTTTTG+GGG | + | chr1.2:8882223-8882242 | None:intergenic | 40.0% |
| ! | CACTATTCCTCTTGCTATGA+TGG | - | chr1.2:8884751-8884770 | MS.gene33184:intron | 40.0% |
| ! | GCAATGAGGACTGCATTTTT+GGG | + | chr1.2:8882224-8882243 | None:intergenic | 40.0% |
| ! | GGACTCTTCACTCTTTTCAT+TGG | - | chr1.2:8883132-8883151 | MS.gene33184:intron | 40.0% |
| ! | GTAGTTTGAGATACAAGGCT+GGG | - | chr1.2:8881262-8881281 | MS.gene33184:CDS | 40.0% |
| ! | GTGAAGTACTAGACACGATT+TGG | - | chr1.2:8883616-8883635 | MS.gene33184:CDS | 40.0% |
| ! | GTTCTTGCAAATGGACTTGT+TGG | - | chr1.2:8884566-8884585 | MS.gene33184:intron | 40.0% |
| !! | AAGGCTGGGTTGTTTCTTAT+AGG | - | chr1.2:8881276-8881295 | MS.gene33184:CDS | 40.0% |
| !! | ACCCAATGAGATTGGCTTAT+TGG | - | chr1.2:8882020-8882039 | MS.gene33184:intron | 40.0% |
| !! | TTGTTGGTTCCATCGATGTT+AGG | - | chr1.2:8884992-8885011 | MS.gene33184:intron | 40.0% |
| AAAATGATTGAAACCCCCGG+GGG | + | chr1.2:8881892-8881911 | None:intergenic | 45.0% | |
| AATCCCACTGTCTACTAGTG+GGG | - | chr1.2:8881722-8881741 | MS.gene33184:intron | 45.0% | |
| AGATTGGGCGACAAAGAGAT+TGG | - | chr1.2:8885446-8885465 | MS.gene33184:CDS | 45.0% | |
| AGTCCTTATCTAAGCACGGT+TGG | - | chr1.2:8882438-8882457 | MS.gene33184:intron | 45.0% | |
| AGTTAGGGCAAAGCTCTGTA+TGG | - | chr1.2:8881755-8881774 | MS.gene33184:intron | 45.0% | |
| ATACACATCCTCTCCACTTG+TGG | + | chr1.2:8882059-8882078 | None:intergenic | 45.0% | |
| ATACATGCTTGGATCAGCTC+AGG | - | chr1.2:8884811-8884830 | MS.gene33184:intron | 45.0% | |
| ATATCTCGGAGCTTCTCTCA+TGG | - | chr1.2:8882638-8882657 | MS.gene33184:intron | 45.0% | |
| ATGCTGAATAATGGCGACCA+TGG | + | chr1.2:8884790-8884809 | None:intergenic | 45.0% | |
| ATGGCTGACATGGTAATCCA+TGG | - | chr1.2:8884770-8884789 | MS.gene33184:intron | 45.0% | |
| ATGTCAGCCATCATAGCAAG+AGG | + | chr1.2:8884761-8884780 | None:intergenic | 45.0% | |
| CAAATCCCACTGTCTACTAG+TGG | - | chr1.2:8881720-8881739 | MS.gene33184:intron | 45.0% | |
| CAAGACTAACGGAGCAAAAG+GGG | + | chr1.2:8882159-8882178 | None:intergenic | 45.0% | |
| CATAAATTGTTGGCGCTTGG+GGG | - | chr1.2:8881798-8881817 | MS.gene33184:intron | 45.0% | |
| CATAGGACATGGCTGAAAGA+AGG | + | chr1.2:8884016-8884035 | None:intergenic | 45.0% | |
| CCGAGATATGTCACCACAAA+TGG | + | chr1.2:8882627-8882646 | None:intergenic | 45.0% | |
| CTTCTTTCAGCCATGTCCTA+TGG | - | chr1.2:8884014-8884033 | MS.gene33184:CDS | 45.0% | |
| GAAAATGATTGAAACCCCCG+GGG | + | chr1.2:8881893-8881912 | None:intergenic | 45.0% | |
| GAAGCTGGTGTATTTGAGAG+AGG | - | chr1.2:8881573-8881592 | MS.gene33184:intron | 45.0% | |
| GATTGGGCGACAAAGAGATT+GGG | - | chr1.2:8885447-8885466 | MS.gene33184:CDS | 45.0% | |
| GCATTAACCAGTGCCAACTT+CGG | - | chr1.2:8884396-8884415 | MS.gene33184:intron | 45.0% | |
| GCCAATCTCATTGGGTCATT+AGG | + | chr1.2:8882016-8882035 | None:intergenic | 45.0% | |
| GCTTTGCCCTAACTTTGACT+AGG | + | chr1.2:8881749-8881768 | None:intergenic | 45.0% | |
| GTTGACGTGCAAAAGCTGTT+TGG | - | chr1.2:8884177-8884196 | MS.gene33184:intron | 45.0% | |
| GTTTACTTGATCTACCACCC+AGG | - | chr1.2:8884675-8884694 | MS.gene33184:intron | 45.0% | |
| TAAACCAGCTCAGAGGGTAA+AGG | + | chr1.2:8883386-8883405 | None:intergenic | 45.0% | |
| TCAATTCCTAAGGCCGACAA+TGG | + | chr1.2:8884503-8884522 | None:intergenic | 45.0% | |
| TCTCCAACCGTGCTTAGATA+AGG | + | chr1.2:8882444-8882463 | None:intergenic | 45.0% | |
| TCTTGGAGAGATAGCACCAT+TGG | - | chr1.2:8882827-8882846 | MS.gene33184:intron | 45.0% | |
| TGGGGACCTAGTCAAAGTTA+GGG | - | chr1.2:8881740-8881759 | MS.gene33184:intron | 45.0% | |
| TTACACTTGTAGCGCTATGG+TGG | - | chr1.2:8884214-8884233 | MS.gene33184:intron | 45.0% | |
| TTGTAACAGTAGCCAATCGG+AGG | - | chr1.2:8884885-8884904 | MS.gene33184:intron | 45.0% | |
| TTTGAACCTGAGACCTAGAG+AGG | - | chr1.2:8881822-8881841 | MS.gene33184:intron | 45.0% | |
| ! | GGTAGTTTGAGATACAAGGC+TGG | - | chr1.2:8881261-8881280 | MS.gene33184:CDS | 45.0% |
| ! | TCTTGCTATGATGGCTGACA+TGG | - | chr1.2:8884760-8884779 | MS.gene33184:intron | 45.0% |
| ! | TGGCTTATTGGAAGCATGCT+TGG | - | chr1.2:8882032-8882051 | MS.gene33184:intron | 45.0% |
| ! | TTTCTGGCGAAGAAGGTGAA+CGG | - | chr1.2:8884154-8884173 | MS.gene33184:intron | 45.0% |
| !! | GAGAGGGATGTAGGTTGATA+TGG | - | chr1.2:8881590-8881609 | MS.gene33184:intron | 45.0% |
| !! | TTGCTCCGTTAGTCTTGAAC+AGG | - | chr1.2:8882162-8882181 | MS.gene33184:CDS | 45.0% |
| AAGCATGCTTGGTCCACAAG+TGG | - | chr1.2:8882043-8882062 | MS.gene33184:intron | 50.0% | |
| AATGGACAGCGCTCTCTTGT+TGG | - | chr1.2:8883978-8883997 | MS.gene33184:CDS | 50.0% | |
| AGTCTTGCCCAGAGTTGTCA+TGG | + | chr1.2:8883229-8883248 | None:intergenic | 50.0% | |
| AGTGAGTGACATGCCCAAAG+TGG | + | chr1.2:8884735-8884754 | None:intergenic | 50.0% | |
| CTCTGCCAGAATGGATGAAG+TGG | - | chr1.2:8884544-8884563 | MS.gene33184:intron | 50.0% | |
| GAATGCGAAACCACATGCGT+TGG | + | chr1.2:8885065-8885084 | None:intergenic | 50.0% | |
| GACAACTCTGGGCAAGACTT+GGG | - | chr1.2:8883230-8883249 | MS.gene33184:intron | 50.0% | |
| GAGTGCGGAATCGCAAACTT+AGG | + | chr1.2:8884527-8884546 | None:intergenic | 50.0% | |
| GCTTAGACAACAGTGTCCTC+TGG | + | chr1.2:8882356-8882375 | None:intergenic | 50.0% | |
| GTGGGGACCTAGTCAAAGTT+AGG | - | chr1.2:8881739-8881758 | MS.gene33184:intron | 50.0% | |
| TAACCAGTGCCAACTTCGGT+GGG | - | chr1.2:8884400-8884419 | MS.gene33184:intron | 50.0% | |
| TCATCCATTCTGGCAGAGTG+CGG | + | chr1.2:8884542-8884561 | None:intergenic | 50.0% | |
| TGACAACTCTGGGCAAGACT+TGG | - | chr1.2:8883229-8883248 | MS.gene33184:intron | 50.0% | |
| TGCTTGGATCAGCTCAGGTA+TGG | - | chr1.2:8884816-8884835 | MS.gene33184:intron | 50.0% | |
| TGGAGAGATAGCACCATTGG+TGG | - | chr1.2:8882830-8882849 | MS.gene33184:intron | 50.0% | |
| TGTATGGACAACTCCCCTTG+TGG | - | chr1.2:8884709-8884728 | MS.gene33184:intron | 50.0% | |
| TGTGAGGTCGAAAGCTCTGT+TGG | - | chr1.2:8881959-8881978 | MS.gene33184:CDS | 50.0% | |
| TTAACCAGTGCCAACTTCGG+TGG | - | chr1.2:8884399-8884418 | MS.gene33184:intron | 50.0% | |
| TTCTGGCGAAGAAGGTGAAC+GGG | - | chr1.2:8884155-8884174 | MS.gene33184:intron | 50.0% | |
| TTGCTCAGTCTGGCCATTGT+CGG | - | chr1.2:8884487-8884506 | MS.gene33184:intron | 50.0% | |
| AACTCCCCTTGTGGCCACTT+TGG | - | chr1.2:8884718-8884737 | MS.gene33184:intron | 55.0% | |
| ACATGCCCAAAGTGGCCACA+AGG | + | chr1.2:8884727-8884746 | None:intergenic | 55.0% | |
| AGGTCCCCACTAGTAGACAG+TGG | + | chr1.2:8881729-8881748 | None:intergenic | 55.0% | |
| ATGCCCAAAGTGGCCACAAG+GGG | + | chr1.2:8884725-8884744 | None:intergenic | 55.0% | |
| CAGAGTTGTCATGGCAACCC+CGG | + | chr1.2:8883220-8883239 | None:intergenic | 55.0% | |
| CATGCCCAAAGTGGCCACAA+GGG | + | chr1.2:8884726-8884745 | None:intergenic | 55.0% | |
| CCAAACTAGCCCACCGAAGT+TGG | + | chr1.2:8884412-8884431 | None:intergenic | 55.0% | |
| CTGTCTTGGTCAGCATGACC+GGG | - | chr1.2:8883199-8883218 | MS.gene33184:intron | 55.0% | |
| GATTCCGCACTCTGCCAGAA+TGG | - | chr1.2:8884535-8884554 | MS.gene33184:intron | 55.0% | |
| GCATCCTTTACCCTCTGAGC+TGG | - | chr1.2:8883379-8883398 | MS.gene33184:intron | 55.0% | |
| GCTGTCTTGGTCAGCATGAC+CGG | - | chr1.2:8883198-8883217 | MS.gene33184:intron | 55.0% | |
| GGGGTTGCCATGACAACTCT+GGG | - | chr1.2:8883219-8883238 | MS.gene33184:intron | 55.0% | |
| GGTCCCCACTAGTAGACAGT+GGG | + | chr1.2:8881728-8881747 | None:intergenic | 55.0% | |
| GTGGTGAAGACTTGGGACCT+AGG | + | chr1.2:8881856-8881875 | None:intergenic | 55.0% | |
| TACCTGGGTGACTTCAGCAG+AGG | + | chr1.2:8881325-8881344 | None:intergenic | 55.0% | |
| TGCTTGGTCCACAAGTGGAG+AGG | - | chr1.2:8882048-8882067 | MS.gene33184:intron | 55.0% | |
| TGGCACAACACCAACGCATG+TGG | - | chr1.2:8885052-8885071 | MS.gene33184:intron | 55.0% | |
| TGGCCTCGTGGTGAAGACTT+GGG | + | chr1.2:8881863-8881882 | None:intergenic | 55.0% | |
| TGTCTTGGTCAGCATGACCG+GGG | - | chr1.2:8883200-8883219 | MS.gene33184:intron | 55.0% | |
| TGTGCTCCTCTCTAGGTCTC+AGG | + | chr1.2:8881831-8881850 | None:intergenic | 55.0% | |
| TTGGCCTCGTGGTGAAGACT+TGG | + | chr1.2:8881864-8881883 | None:intergenic | 55.0% | |
| ! | ACTCCCCTTGTGGCCACTTT+GGG | - | chr1.2:8884719-8884738 | MS.gene33184:intron | 55.0% |
| ! | CATACAACGCAGAGTGCCCT+GGG | + | chr1.2:8884695-8884714 | None:intergenic | 55.0% |
| ! | CTAGAGAGGAGCACACTCCT+AGG | - | chr1.2:8881836-8881855 | MS.gene33184:intron | 55.0% |
| ! | CTAGGAGTGTGCTCCTCTCT+AGG | + | chr1.2:8881838-8881857 | None:intergenic | 55.0% |
| !! | CCAACTTCGGTGGGCTAGTT+TGG | - | chr1.2:8884409-8884428 | MS.gene33184:intron | 55.0% |
| CGGGGTTGCCATGACAACTC+TGG | - | chr1.2:8883218-8883237 | MS.gene33184:intron | 60.0% | |
| CTCCTCTGCTGAAGTCACCC+AGG | - | chr1.2:8881320-8881339 | MS.gene33184:intron | 60.0% | |
| GATTGAAACCCCCGGGGGTT+GGG | + | chr1.2:8881887-8881906 | None:intergenic | 60.0% | |
| GGTCCCAAGTCTTCACCACG+AGG | - | chr1.2:8881857-8881876 | MS.gene33184:intron | 60.0% | |
| GTCTGGCCATTGTCGGCCTT+AGG | - | chr1.2:8884494-8884513 | MS.gene33184:intron | 60.0% | |
| TAGCCCACCGAAGTTGGCAC+TGG | + | chr1.2:8884406-8884425 | None:intergenic | 60.0% | |
| TGATTGAAACCCCCGGGGGT+TGG | + | chr1.2:8881888-8881907 | None:intergenic | 60.0% | |
| ! | CCAGGGCACTCTGCGTTGTA+TGG | - | chr1.2:8884693-8884712 | MS.gene33184:intron | 60.0% |
| ! | CCATACAACGCAGAGTGCCC+TGG | + | chr1.2:8884696-8884715 | None:intergenic | 60.0% |
| !! | GGAACAATGGAGCACCGCAG+TGG | + | chr1.2:8882290-8882309 | None:intergenic | 60.0% |
| ! | ACAACGCAGAGTGCCCTGGG+TGG | + | chr1.2:8884692-8884711 | None:intergenic | 65.0% |
| ACGAGGCCAACCCAACCCCC+GGG | - | chr1.2:8881874-8881893 | MS.gene33184:intron | 70.0% | |
| CACGAGGCCAACCCAACCCC+CGG | - | chr1.2:8881873-8881892 | MS.gene33184:intron | 70.0% | |
| GAAACCCCCGGGGGTTGGGT+TGG | + | chr1.2:8881883-8881902 | None:intergenic | 70.0% | |
| CGAGGCCAACCCAACCCCCG+GGG | - | chr1.2:8881875-8881894 | MS.gene33184:intron | 75.0% | |
| GAGGCCAACCCAACCCCCGG+GGG | - | chr1.2:8881876-8881895 | MS.gene33184:intron | 75.0% | |
| !! | CGGGGGTTGGGTTGGCCTCG+TGG | + | chr1.2:8881875-8881894 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 8881258 | 8885476 | 8881258 | ID=MS.gene33184 |
| chr1.2 | mRNA | 8881258 | 8885476 | 8881258 | ID=MS.gene33184.t1;Parent=MS.gene33184 |
| chr1.2 | exon | 8885393 | 8885476 | 8885393 | ID=MS.gene33184.t1.exon1;Parent=MS.gene33184.t1 |
| chr1.2 | CDS | 8885393 | 8885476 | 8885393 | ID=cds.MS.gene33184.t1;Parent=MS.gene33184.t1 |
| chr1.2 | exon | 8883778 | 8884134 | 8883778 | ID=MS.gene33184.t1.exon2;Parent=MS.gene33184.t1 |
| chr1.2 | CDS | 8883778 | 8884134 | 8883778 | ID=cds.MS.gene33184.t1;Parent=MS.gene33184.t1 |
| chr1.2 | exon | 8883454 | 8883668 | 8883454 | ID=MS.gene33184.t1.exon3;Parent=MS.gene33184.t1 |
| chr1.2 | CDS | 8883454 | 8883668 | 8883454 | ID=cds.MS.gene33184.t1;Parent=MS.gene33184.t1 |
| chr1.2 | exon | 8882687 | 8882757 | 8882687 | ID=MS.gene33184.t1.exon4;Parent=MS.gene33184.t1 |
| chr1.2 | CDS | 8882687 | 8882757 | 8882687 | ID=cds.MS.gene33184.t1;Parent=MS.gene33184.t1 |
| chr1.2 | exon | 8882494 | 8882595 | 8882494 | ID=MS.gene33184.t1.exon5;Parent=MS.gene33184.t1 |
| chr1.2 | CDS | 8882494 | 8882595 | 8882494 | ID=cds.MS.gene33184.t1;Parent=MS.gene33184.t1 |
| chr1.2 | exon | 8882122 | 8882239 | 8882122 | ID=MS.gene33184.t1.exon6;Parent=MS.gene33184.t1 |
| chr1.2 | CDS | 8882122 | 8882239 | 8882122 | ID=cds.MS.gene33184.t1;Parent=MS.gene33184.t1 |
| chr1.2 | exon | 8881902 | 8882037 | 8881902 | ID=MS.gene33184.t1.exon7;Parent=MS.gene33184.t1 |
| chr1.2 | CDS | 8881902 | 8882037 | 8881902 | ID=cds.MS.gene33184.t1;Parent=MS.gene33184.t1 |
| chr1.2 | exon | 8881258 | 8881320 | 8881258 | ID=MS.gene33184.t1.exon8;Parent=MS.gene33184.t1 |
| chr1.2 | CDS | 8881258 | 8881320 | 8881258 | ID=cds.MS.gene33184.t1;Parent=MS.gene33184.t1 |
| Gene Sequence |
| Protein sequence |
