Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33646.t1 | XP_024631268.1 | 99.1 | 441 | 4 | 0 | 1 | 441 | 1 | 441 | 6.10E-254 | 886.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33646.t1 | O49285 | 69.7 | 449 | 117 | 9 | 1 | 440 | 1 | 439 | 2.2e-175 | 616.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33646.t1 | A0A396JL16 | 99.1 | 441 | 4 | 0 | 1 | 441 | 1 | 441 | 4.4e-254 | 886.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene33646 | MS.gene44446 | PPI |
MS.gene33646 | MS.gene015275 | PPI |
MS.gene33646 | MS.gene60184 | PPI |
MS.gene33646 | MS.gene43525 | PPI |
MS.gene33646 | MS.gene20314 | PPI |
MS.gene33646 | MS.gene011698 | PPI |
MS.gene09616 | MS.gene33646 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33646.t1 | MTR_1g029520 | 99.041 | 417 | 4 | 0 | 25 | 441 | 254 | 670 | 0.0 | 855 |
MS.gene33646.t1 | MTR_3g088885 | 80.726 | 441 | 77 | 6 | 1 | 440 | 1 | 434 | 0.0 | 719 |
MS.gene33646.t1 | MTR_5g047260 | 54.654 | 419 | 174 | 5 | 8 | 426 | 16 | 418 | 1.53e-153 | 444 |
MS.gene33646.t1 | MTR_7g022470 | 52.914 | 429 | 189 | 6 | 9 | 437 | 10 | 425 | 1.44e-151 | 439 |
MS.gene33646.t1 | MTR_7g028050 | 49.412 | 425 | 205 | 5 | 9 | 433 | 1 | 415 | 7.30e-139 | 406 |
MS.gene33646.t1 | MTR_4g101950 | 46.919 | 422 | 198 | 6 | 6 | 426 | 3 | 399 | 4.96e-131 | 386 |
MS.gene33646.t1 | MTR_5g015170 | 46.437 | 435 | 214 | 8 | 10 | 432 | 10 | 437 | 2.08e-128 | 381 |
MS.gene33646.t1 | MTR_5g011580 | 46.318 | 421 | 202 | 6 | 6 | 426 | 3 | 399 | 2.09e-127 | 377 |
MS.gene33646.t1 | MTR_5g047260 | 52.355 | 361 | 156 | 5 | 8 | 368 | 16 | 360 | 4.50e-123 | 363 |
MS.gene33646.t1 | MTR_4g097380 | 42.381 | 420 | 234 | 3 | 7 | 420 | 26 | 443 | 5.44e-117 | 352 |
MS.gene33646.t1 | MTR_5g047260 | 53.398 | 309 | 129 | 4 | 8 | 316 | 16 | 309 | 2.51e-105 | 316 |
MS.gene33646.t1 | MTR_7g028050 | 49.201 | 313 | 154 | 3 | 121 | 433 | 5 | 312 | 1.04e-96 | 295 |
MS.gene33646.t1 | MTR_1g012740 | 48.000 | 100 | 46 | 1 | 283 | 382 | 54 | 147 | 1.84e-23 | 97.1 |
MS.gene33646.t1 | MTR_1g012740 | 33.113 | 151 | 72 | 5 | 6 | 150 | 7 | 134 | 1.87e-15 | 74.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33646.t1 | AT1G76990 | 69.710 | 449 | 117 | 9 | 1 | 440 | 1 | 439 | 0.0 | 633 |
MS.gene33646.t1 | AT1G76990 | 69.710 | 449 | 117 | 9 | 1 | 440 | 1 | 439 | 0.0 | 633 |
MS.gene33646.t1 | AT1G76990 | 69.710 | 449 | 117 | 9 | 1 | 440 | 1 | 439 | 0.0 | 633 |
MS.gene33646.t1 | AT1G76990 | 69.710 | 449 | 117 | 9 | 1 | 440 | 1 | 439 | 0.0 | 633 |
MS.gene33646.t1 | AT1G76990 | 69.710 | 449 | 117 | 9 | 1 | 440 | 1 | 439 | 0.0 | 633 |
MS.gene33646.t1 | AT1G69040 | 53.009 | 432 | 181 | 6 | 9 | 435 | 7 | 421 | 2.19e-148 | 431 |
MS.gene33646.t1 | AT1G69040 | 53.009 | 432 | 181 | 6 | 9 | 435 | 11 | 425 | 2.91e-148 | 431 |
MS.gene33646.t1 | AT5G25320 | 49.433 | 441 | 195 | 7 | 1 | 414 | 1 | 440 | 1.25e-145 | 426 |
MS.gene33646.t1 | AT2G03730 | 51.408 | 426 | 187 | 6 | 4 | 419 | 3 | 418 | 2.25e-144 | 421 |
MS.gene33646.t1 | AT2G03730 | 51.408 | 426 | 187 | 6 | 4 | 419 | 3 | 418 | 2.25e-144 | 421 |
MS.gene33646.t1 | AT3G01990 | 50.493 | 406 | 186 | 5 | 10 | 415 | 17 | 407 | 1.34e-137 | 404 |
MS.gene33646.t1 | AT3G01990 | 50.493 | 406 | 186 | 5 | 10 | 415 | 17 | 407 | 1.34e-137 | 404 |
MS.gene33646.t1 | AT3G01990 | 50.493 | 406 | 186 | 5 | 10 | 415 | 17 | 407 | 1.55e-137 | 403 |
MS.gene33646.t1 | AT3G01990 | 48.416 | 442 | 208 | 6 | 10 | 451 | 3 | 424 | 1.86e-137 | 402 |
MS.gene33646.t1 | AT3G01990 | 48.416 | 442 | 208 | 6 | 10 | 451 | 3 | 424 | 1.86e-137 | 402 |
MS.gene33646.t1 | AT3G01990 | 50.493 | 406 | 186 | 5 | 10 | 415 | 3 | 393 | 2.87e-137 | 402 |
MS.gene33646.t1 | AT5G25320 | 48.259 | 402 | 182 | 5 | 38 | 414 | 1 | 401 | 1.44e-126 | 376 |
MS.gene33646.t1 | AT4G22780 | 47.407 | 405 | 188 | 4 | 12 | 415 | 9 | 389 | 2.14e-124 | 370 |
MS.gene33646.t1 | AT4G22780 | 47.407 | 405 | 188 | 4 | 12 | 415 | 9 | 389 | 2.14e-124 | 370 |
MS.gene33646.t1 | AT1G12420 | 45.714 | 420 | 205 | 8 | 8 | 427 | 6 | 402 | 1.90e-120 | 359 |
MS.gene33646.t1 | AT5G65890 | 43.155 | 431 | 231 | 5 | 7 | 425 | 8 | 436 | 6.92e-112 | 339 |
MS.gene33646.t1 | AT5G65890 | 43.155 | 431 | 231 | 5 | 7 | 425 | 8 | 436 | 6.92e-112 | 339 |
MS.gene33646.t1 | AT5G25320 | 46.791 | 374 | 171 | 7 | 1 | 347 | 1 | 373 | 3.85e-111 | 333 |
MS.gene33646.t1 | AT3G01990 | 49.271 | 343 | 159 | 5 | 10 | 352 | 17 | 344 | 2.89e-109 | 328 |
MS.gene33646.t1 | AT3G01990 | 49.271 | 343 | 159 | 5 | 10 | 352 | 3 | 330 | 3.93e-109 | 327 |
MS.gene33646.t1 | AT3G01990 | 49.704 | 338 | 155 | 5 | 10 | 347 | 17 | 339 | 5.22e-109 | 327 |
MS.gene33646.t1 | AT1G12420 | 43.466 | 352 | 177 | 7 | 76 | 427 | 1 | 330 | 8.12e-92 | 283 |
MS.gene33646.t1 | AT5G65890 | 40.933 | 386 | 214 | 5 | 52 | 425 | 1 | 384 | 1.89e-90 | 282 |
MS.gene33646.t1 | AT5G65890 | 40.933 | 386 | 214 | 5 | 52 | 425 | 1 | 384 | 1.89e-90 | 282 |
MS.gene33646.t1 | AT3G01990 | 47.319 | 317 | 152 | 5 | 10 | 326 | 17 | 318 | 9.73e-90 | 276 |
MS.gene33646.t1 | AT3G01990 | 47.319 | 317 | 152 | 5 | 10 | 326 | 3 | 304 | 1.12e-89 | 276 |
MS.gene33646.t1 | AT5G65890 | 39.423 | 312 | 177 | 4 | 124 | 425 | 13 | 322 | 3.13e-66 | 217 |
Find 142 sgRNAs with CRISPR-Local
Find 352 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCCAACTCTTCACACCTTC+TGG | 0.132030 | 1.1:+15047693 | None:intergenic |
TTGATTCTCCTCCCTCTTTC+AGG | 0.151257 | 1.1:-15047272 | MS.gene33646:CDS |
AATACGTTCTATTTCGATAT+TGG | 0.184866 | 1.1:+15047248 | None:intergenic |
TTCTGATGGTAGTTGGTTTA+TGG | 0.190044 | 1.1:-15048500 | MS.gene33646:CDS |
GCCCATCCTCGAGAGGTTTC+TGG | 0.246221 | 1.1:+15044975 | None:intergenic |
CACGACTTCCAGCAGAATTC+CGG | 0.249259 | 1.1:+15048570 | None:intergenic |
ATACGTTCTATTTCGATATT+GGG | 0.265506 | 1.1:+15047249 | None:intergenic |
CCCAACTCTTCACACCTTCT+GGG | 0.315377 | 1.1:+15047694 | None:intergenic |
TCCAATTCGCAGGGTCTCTA+TGG | 0.315502 | 1.1:-15049155 | MS.gene33646:intron |
GAAGCACTGCGTAAAGAAAT+TGG | 0.317035 | 1.1:-15045047 | MS.gene33646:CDS |
CCAAATGTTGTTTGCTGATA+GGG | 0.330716 | 1.1:-15047334 | MS.gene33646:CDS |
TTGTTGCATCATTGACATAA+AGG | 0.334530 | 1.1:+15047505 | None:intergenic |
ATAGAACGTATTGAAGAAAA+AGG | 0.338531 | 1.1:-15047237 | MS.gene33646:CDS |
ACCAAATGTTGTTTGCTGAT+AGG | 0.341425 | 1.1:-15047335 | MS.gene33646:CDS |
CCCTATCAGCAAACAACATT+TGG | 0.356933 | 1.1:+15047334 | None:intergenic |
CTCGCTTACTCTTCTTTGAA+TGG | 0.358790 | 1.1:+15046142 | None:intergenic |
TCTGGGCTCTTGCCACCCTT+TGG | 0.363473 | 1.1:+15047711 | None:intergenic |
ATTCAGTCCTTTCTCTCCTA+TGG | 0.378855 | 1.1:+15045121 | None:intergenic |
GGTGAAACCCATGGAGAAAC+TGG | 0.381534 | 1.1:+15047383 | None:intergenic |
TCGAGAGGTTTCTGGTGCTT+TGG | 0.382279 | 1.1:+15044983 | None:intergenic |
CAGCTGCAATCACATTGAAT+TGG | 0.392381 | 1.1:+15047562 | None:intergenic |
ACGACTTCCAGCAGAATTCC+GGG | 0.392506 | 1.1:+15048571 | None:intergenic |
CTGAAGTTTGGACTCATAAC+AGG | 0.401956 | 1.1:-15047542 | MS.gene33646:CDS |
TCTGGTGCTTTGGTGTTGGC+TGG | 0.406285 | 1.1:+15044993 | None:intergenic |
ACATATCTTCTGATGGTAGT+TGG | 0.412715 | 1.1:-15048507 | MS.gene33646:CDS |
ATGTGATTGCAGCTGAAGTT+TGG | 0.418119 | 1.1:-15047554 | MS.gene33646:CDS |
ATCAGAAGATATGTAAGCTT+TGG | 0.421120 | 1.1:+15048516 | None:intergenic |
GCCCAGAAGGTGTGAAGAGT+TGG | 0.421778 | 1.1:-15047695 | MS.gene33646:CDS |
TAGAAAGAAAGGTGGAGGTT+AGG | 0.422333 | 1.1:-15044217 | MS.gene33646:CDS |
AGAACGGCTTAACAGTTTGT+AGG | 0.425881 | 1.1:-15045157 | MS.gene33646:CDS |
CATTGAATTGGAAGCTCGCC+AGG | 0.426882 | 1.1:+15047574 | None:intergenic |
GGTTTCTGGTGCTTTGGTGT+TGG | 0.431935 | 1.1:+15044989 | None:intergenic |
GTTGCTGAAGTTCTCGTACT+CGG | 0.436558 | 1.1:+15049614 | None:intergenic |
TCGTACTCGGGATCAAAGTA+TGG | 0.441083 | 1.1:+15049627 | None:intergenic |
CAATAAACCCGGAATTCTGC+TGG | 0.451982 | 1.1:-15048578 | MS.gene33646:CDS |
AATTATTGACTTCATTGAAA+AGG | 0.455728 | 1.1:-15048194 | MS.gene33646:intron |
CATACAGCCATTGAGCTCAT+TGG | 0.456613 | 1.1:-15047636 | MS.gene33646:CDS |
CCCAGAAGGTGTGAAGAGTT+GGG | 0.459787 | 1.1:-15047694 | MS.gene33646:CDS |
CATGCCTCCATCTCATCTGA+AGG | 0.466025 | 1.1:-15047123 | MS.gene33646:CDS |
TGAAGAGTTGGGAAGGCAAA+CGG | 0.470682 | 1.1:-15047683 | MS.gene33646:CDS |
GGCTTAACAGTTTGTAGGGC+AGG | 0.471990 | 1.1:-15045152 | MS.gene33646:CDS |
GGCCAGGACCAGTTTCTCCA+TGG | 0.473521 | 1.1:-15047391 | MS.gene33646:CDS |
GCCAGGACCAGTTTCTCCAT+GGG | 0.475456 | 1.1:-15047390 | MS.gene33646:CDS |
ACACTGAAGGGGAGAAAGAA+AGG | 0.477680 | 1.1:-15046187 | MS.gene33646:CDS |
TCAATGATGTTCATATCCAC+AGG | 0.481133 | 1.1:+15045068 | None:intergenic |
GTTGAATGGCAAAAGTTTGT+TGG | 0.483753 | 1.1:-15049650 | None:intergenic |
TTATGAAGTCAAGGTCTGTC+AGG | 0.488033 | 1.1:+15048542 | None:intergenic |
CGGGTTGGCATTCACTCCAT+TGG | 0.490248 | 1.1:-15047663 | MS.gene33646:CDS |
TTAATGAAAACAGGTACCTA+TGG | 0.493773 | 1.1:-15044267 | MS.gene33646:intron |
GTCTGAGATATCAGCTGTCC+TGG | 0.493937 | 1.1:-15047592 | MS.gene33646:CDS |
TTGCTGAAGTTCTCGTACTC+GGG | 0.494665 | 1.1:+15049615 | None:intergenic |
ACCCATGGAGAAACTGGTCC+TGG | 0.501228 | 1.1:+15047389 | None:intergenic |
TCACATTGACCATCACAGTC+TGG | 0.502894 | 1.1:+15045024 | None:intergenic |
GAAGAGTTGGGAAGGCAAAC+GGG | 0.503318 | 1.1:-15047682 | MS.gene33646:CDS |
TTGAATCATCATCCACAGCT+TGG | 0.506824 | 1.1:+15047481 | None:intergenic |
ATTCTTAGGAGTACTTCATC+AGG | 0.510626 | 1.1:-15046232 | MS.gene33646:intron |
TTCGATATTGGGCCTGAAAG+AGG | 0.510982 | 1.1:+15047260 | None:intergenic |
TGAACATTTAAATAGGCTCT+AGG | 0.512518 | 1.1:-15047735 | MS.gene33646:intron |
CCATGATTGTACACTGATCA+AGG | 0.512717 | 1.1:-15049119 | MS.gene33646:intron |
TCGATATTGGGCCTGAAAGA+GGG | 0.514165 | 1.1:+15047261 | None:intergenic |
AGCCATTGAGCTCATTGGTC+GGG | 0.518001 | 1.1:-15047631 | MS.gene33646:CDS |
CCTTGATCAGTGTACAATCA+TGG | 0.522276 | 1.1:+15049119 | None:intergenic |
CACCAGAAACCTCTCGAGGA+TGG | 0.523676 | 1.1:-15044977 | MS.gene33646:CDS |
CTCATTGGTCGGGACCGCCC+AGG | 0.524150 | 1.1:-15047621 | MS.gene33646:CDS |
AAGCTCAACCACATCCTTCG+TGG | 0.529052 | 1.1:-15047435 | MS.gene33646:CDS |
TATCAGCAAACAACATTTGG+TGG | 0.529977 | 1.1:+15047337 | None:intergenic |
TGAAGGGCCATATGCTTCAC+AGG | 0.531696 | 1.1:-15047106 | MS.gene33646:intron |
TTCTATGTGAGAGATGCATA+TGG | 0.536976 | 1.1:-15045095 | MS.gene33646:CDS |
TAGTGTGAGATGCAAAGATC+GGG | 0.541924 | 1.1:-15047202 | MS.gene33646:CDS |
AAATAGGCTCTAGGACCAAA+GGG | 0.543385 | 1.1:-15047726 | MS.gene33646:intron |
GATGGTAGTTGGTTTATGGA+TGG | 0.543454 | 1.1:-15048496 | MS.gene33646:intron |
GATATCTCAGACAAAAGACC+TGG | 0.545024 | 1.1:+15047603 | None:intergenic |
TATGGTCTCAGTGACAAAGC+AGG | 0.545445 | 1.1:-15044249 | MS.gene33646:CDS |
TACTTCATCAGGCACGTGGA+TGG | 0.545747 | 1.1:-15046221 | MS.gene33646:CDS |
GTGTCAACCATAGGAGAGAA+AGG | 0.546097 | 1.1:-15045128 | MS.gene33646:CDS |
CCTTCTGTCCATGTGGGTGA+AGG | 0.546823 | 1.1:+15047362 | None:intergenic |
ACCAGAAACCTCTCGAGGAT+GGG | 0.548981 | 1.1:-15044976 | MS.gene33646:CDS |
TAAATAGGCTCTAGGACCAA+AGG | 0.550274 | 1.1:-15047727 | MS.gene33646:intron |
AAGTTAACAGGGCACCTTGG+AGG | 0.550795 | 1.1:+15049582 | None:intergenic |
GTCCCGACCAATGAGCTCAA+TGG | 0.551521 | 1.1:+15047629 | None:intergenic |
GGGTTACGACATAGAAAGAA+AGG | 0.553670 | 1.1:-15044228 | MS.gene33646:CDS |
GAACGGCTTAACAGTTTGTA+GGG | 0.558245 | 1.1:-15045156 | MS.gene33646:CDS |
ATGCATACCTGTGAAGCATA+TGG | 0.558826 | 1.1:+15047099 | None:intergenic |
GGATGCACACTTGACACTGA+AGG | 0.564728 | 1.1:-15046200 | MS.gene33646:CDS |
GGGTTTCACCTTCACCCACA+TGG | 0.565505 | 1.1:-15047370 | MS.gene33646:CDS |
GCTTGCTGTCTGAAGTGACT+AGG | 0.566444 | 1.1:-15045190 | MS.gene33646:CDS |
AAGGGTGGCAAGAGCCCAGA+AGG | 0.571813 | 1.1:-15047708 | MS.gene33646:CDS |
CCTCACAACCACGAAGGATG+TGG | 0.572226 | 1.1:+15047427 | None:intergenic |
CTTTGGTAATTATGAAGTCA+AGG | 0.574350 | 1.1:+15048533 | None:intergenic |
CCTTCACCCACATGGACAGA+AGG | 0.575437 | 1.1:-15047362 | MS.gene33646:CDS |
TATCCTTTGCACACAGCTCA+AGG | 0.579485 | 1.1:+15045219 | None:intergenic |
GGAGGTTAGGCAGCGAGGAG+CGG | 0.581861 | 1.1:-15044204 | MS.gene33646:CDS |
GATGCACACTTGACACTGAA+GGG | 0.583904 | 1.1:-15046199 | MS.gene33646:CDS |
CGACATAGAAAGAAAGGTGG+AGG | 0.583972 | 1.1:-15044222 | MS.gene33646:CDS |
CCACATCCTTCGTGGTTGTG+AGG | 0.585266 | 1.1:-15047427 | MS.gene33646:CDS |
TACTCTAGCCCATCCTCGAG+AGG | 0.585301 | 1.1:+15044968 | None:intergenic |
AATGGCTGTATGATCACCAA+TGG | 0.585858 | 1.1:+15047647 | None:intergenic |
TTAGTGTGAGATGCAAAGAT+CGG | 0.586475 | 1.1:-15047203 | MS.gene33646:CDS |
AGGGCAGGTGTGTCAACCAT+AGG | 0.587010 | 1.1:-15045137 | MS.gene33646:CDS |
GTGGAGCCTTCTGTCCATGT+GGG | 0.594043 | 1.1:+15047356 | None:intergenic |
AAAGCTTACATATCTTCTGA+TGG | 0.594595 | 1.1:-15048514 | MS.gene33646:CDS |
CAGCCATTGAGCTCATTGGT+CGG | 0.596989 | 1.1:-15047632 | MS.gene33646:CDS |
AGTTGGGAAGGCAAACGGGT+TGG | 0.597769 | 1.1:-15047678 | MS.gene33646:CDS |
CAATGATGTTCATATCCACA+GGG | 0.601090 | 1.1:+15045069 | None:intergenic |
GAAGGTGTGAAGAGTTGGGA+AGG | 0.603934 | 1.1:-15047690 | MS.gene33646:CDS |
ATATGGCCCTTCAGATGAGA+TGG | 0.605356 | 1.1:+15047116 | None:intergenic |
GATAGGGATTATGAGAGTGC+TGG | 0.606196 | 1.1:-15047318 | MS.gene33646:CDS |
ATGCCTCCATCTCATCTGAA+GGG | 0.606421 | 1.1:-15047122 | MS.gene33646:CDS |
CACTGAAGGGGAGAAAGAAA+GGG | 0.607213 | 1.1:-15046186 | MS.gene33646:CDS |
ATGAACAGTATTTCATGTCA+CGG | 0.611220 | 1.1:-15048248 | MS.gene33646:intron |
TGTGATGGTCAATGTGAAGA+AGG | 0.612803 | 1.1:-15045018 | MS.gene33646:CDS |
ACTAGGATTCTACGAGAGAA+CGG | 0.613355 | 1.1:-15045173 | MS.gene33646:CDS |
AGAAATTGGCCAGACTGTGA+TGG | 0.614374 | 1.1:-15045033 | MS.gene33646:CDS |
AGGGATTATGAGAGTGCTGG+TGG | 0.616212 | 1.1:-15047315 | MS.gene33646:CDS |
TGTCTGCACTCTTACTGACA+TGG | 0.618144 | 1.1:-15047160 | MS.gene33646:CDS |
ATGGTCTCAGTGACAAAGCA+GGG | 0.622676 | 1.1:-15044248 | MS.gene33646:CDS |
AGGATGATGAGAATGTGGCC+AGG | 0.628662 | 1.1:-15047407 | MS.gene33646:CDS |
TGCTTTGTCACTGAGACCAT+AGG | 0.630768 | 1.1:+15044251 | None:intergenic |
GCAACAGAATCAATCCTCCA+AGG | 0.646007 | 1.1:-15049596 | MS.gene33646:intron |
GGTGGAGCCTTCTGTCCATG+TGG | 0.646466 | 1.1:+15047355 | None:intergenic |
CATTCAAAGAAGAGTAAGCG+AGG | 0.651757 | 1.1:-15046141 | MS.gene33646:intron |
TGGCCCTTCAGATGAGATGG+AGG | 0.653838 | 1.1:+15047119 | None:intergenic |
TGATGCAACAAACCAAGCTG+TGG | 0.654815 | 1.1:-15047493 | MS.gene33646:CDS |
GTGGGTGAAGGTGAAACCCA+TGG | 0.659048 | 1.1:+15047374 | None:intergenic |
AAGGTGGAGGTTAGGCAGCG+AGG | 0.660149 | 1.1:-15044209 | MS.gene33646:CDS |
GGAGTACTTCATCAGGCACG+TGG | 0.663877 | 1.1:-15046225 | MS.gene33646:CDS |
ATGCACACTTGACACTGAAG+GGG | 0.665219 | 1.1:-15046198 | MS.gene33646:CDS |
GAGCCTTGAGCTGTGTGCAA+AGG | 0.668681 | 1.1:-15045222 | MS.gene33646:CDS |
ATTGATAGCGTCAATAAACC+CGG | 0.669304 | 1.1:-15048589 | MS.gene33646:CDS |
TTTCATGTCACGGATCAGCA+AGG | 0.670024 | 1.1:-15048238 | MS.gene33646:CDS |
ATATCTCAGACAAAAGACCT+GGG | 0.673607 | 1.1:+15047604 | None:intergenic |
TTGTGAGGATGATGAGAATG+TGG | 0.676772 | 1.1:-15047412 | MS.gene33646:CDS |
CTGTGTGCAAAGGATAGAGT+GGG | 0.677348 | 1.1:-15045212 | MS.gene33646:CDS |
CTAGTCTACGAGTGAAACAA+CGG | 0.679159 | 1.1:+15044170 | None:intergenic |
GCTGTGTGCAAAGGATAGAG+TGG | 0.682070 | 1.1:-15045213 | MS.gene33646:CDS |
CATCATCCTCACAACCACGA+AGG | 0.690210 | 1.1:+15047421 | None:intergenic |
TTACGACATAGAAAGAAAGG+TGG | 0.693051 | 1.1:-15044225 | MS.gene33646:CDS |
ATATTGGGCCTGAAAGAGGG+AGG | 0.694567 | 1.1:+15047264 | None:intergenic |
AAAGCACCAGAAACCTCTCG+AGG | 0.723344 | 1.1:-15044981 | MS.gene33646:CDS |
TAGGCTCTAGGACCAAAGGG+TGG | 0.729498 | 1.1:-15047723 | MS.gene33646:CDS |
AGATGCATATGGAAACCCTG+TGG | 0.774336 | 1.1:-15045084 | MS.gene33646:CDS |
TCTCAGACAAAAGACCTGGG+CGG | 0.775644 | 1.1:+15047607 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AGAATTAATTAATTATTTTG+AGG | + | chr1.1:15044734-15044753 | None:intergenic | 10.0% |
!! | AAATTAATTGACAAAATTTG+AGG | - | chr1.1:15047519-15047538 | MS.gene33646:CDS | 15.0% |
!! | AGTAACTATAAAATAAAGAA+TGG | + | chr1.1:15046771-15046790 | None:intergenic | 15.0% |
!! | TATACAATAGATTAAAATGA+TGG | + | chr1.1:15049307-15049326 | None:intergenic | 15.0% |
!! | TTGTTTGCTTAATTAAAATA+TGG | - | chr1.1:15045421-15045440 | MS.gene33646:intron | 15.0% |
!!! | ACATTTTTTTTTTCTGTTTT+TGG | + | chr1.1:15044856-15044875 | None:intergenic | 15.0% |
!!! | ATTAATTCTAACATTTTTCA+TGG | - | chr1.1:15044745-15044764 | MS.gene33646:intron | 15.0% |
!!! | TTGTTTTCAAATTTTTGTAT+AGG | + | chr1.1:15047025-15047044 | None:intergenic | 15.0% |
!!! | TTTACAGTAATATTTTGAAT+TGG | - | chr1.1:15046815-15046834 | MS.gene33646:intron | 15.0% |
!!! | TTTTTTATTCCTAGTAAATT+AGG | - | chr1.1:15045093-15045112 | MS.gene33646:CDS | 15.0% |
!! | AAGTTAAATTCAATGATGTT+AGG | + | chr1.1:15044901-15044920 | None:intergenic | 20.0% |
!! | AGGTTCAAAATGTATTAATT+TGG | + | chr1.1:15047954-15047973 | None:intergenic | 20.0% |
!! | ATGAAATAAACTAATGATGA+TGG | + | chr1.1:15045144-15045163 | None:intergenic | 20.0% |
!! | CAAATTACAGTAATAAGATA+GGG | - | chr1.1:15049259-15049278 | MS.gene33646:intron | 20.0% |
!! | GAAAGAACAAAAATAAGAAT+TGG | + | chr1.1:15045775-15045794 | None:intergenic | 20.0% |
!! | GTTAAATTAAAAGCAAACAA+AGG | + | chr1.1:15047154-15047173 | None:intergenic | 20.0% |
!! | TAGGGACTATAATTAATTAA+TGG | - | chr1.1:15048384-15048403 | MS.gene33646:intron | 20.0% |
!! | TCATTTACAAATCACAAAAT+AGG | + | chr1.1:15048943-15048962 | None:intergenic | 20.0% |
!!! | AATTATTGACTTCATTGAAA+AGG | - | chr1.1:15045626-15045645 | MS.gene33646:intron | 20.0% |
!!! | AGTTATTTTTGTCAAAACAA+GGG | + | chr1.1:15044510-15044529 | None:intergenic | 20.0% |
!!! | ATTAGTTTATTTCATTTCCA+TGG | - | chr1.1:15045149-15045168 | MS.gene33646:CDS | 20.0% |
!!! | ATTGTTTGGTTTAAAACAAA+AGG | + | chr1.1:15049034-15049053 | None:intergenic | 20.0% |
!!! | CATCATTGAATTTAACTTAT+TGG | - | chr1.1:15044903-15044922 | MS.gene33646:intron | 20.0% |
!!! | TAATTTTATTAGTTTTCGAC+AGG | - | chr1.1:15048280-15048299 | MS.gene33646:intron | 20.0% |
!!! | TAGTTATTTTTGTCAAAACA+AGG | + | chr1.1:15044511-15044530 | None:intergenic | 20.0% |
!!! | TTAAATATTTTGCAGATCAT+TGG | + | chr1.1:15044293-15044312 | None:intergenic | 20.0% |
!!! | TTTTTTTCCTTCATATTTTG+AGG | + | chr1.1:15048157-15048176 | None:intergenic | 20.0% |
! | AAAACCTAAAAACAAGATGA+GGG | - | chr1.1:15047047-15047066 | MS.gene33646:intron | 25.0% |
! | AACAGACTCTAAATATCAAT+TGG | - | chr1.1:15046001-15046020 | MS.gene33646:intron | 25.0% |
! | AACCATTACTAAAATAGACT+AGG | - | chr1.1:15047739-15047758 | MS.gene33646:intron | 25.0% |
! | AATACGTTCTATTTCGATAT+TGG | + | chr1.1:15046575-15046594 | None:intergenic | 25.0% |
! | AATTTCTTTATTCCTTCCTT+TGG | + | chr1.1:15046944-15046963 | None:intergenic | 25.0% |
! | AGGTTCTTGACTTAATTAAA+AGG | - | chr1.1:15048902-15048921 | MS.gene33646:intron | 25.0% |
! | ATAACTAGTCCTTTATTACA+AGG | - | chr1.1:15044524-15044543 | MS.gene33646:intron | 25.0% |
! | ATACGTTCTATTTCGATATT+GGG | + | chr1.1:15046574-15046593 | None:intergenic | 25.0% |
! | ATAGAACGTATTGAAGAAAA+AGG | - | chr1.1:15046583-15046602 | MS.gene33646:intron | 25.0% |
! | ATTAAGTAAGATACATGAGA+TGG | + | chr1.1:15049103-15049122 | None:intergenic | 25.0% |
! | ATTTAGCAATTTACTGAAAG+TGG | + | chr1.1:15045070-15045089 | None:intergenic | 25.0% |
! | CTAGTTGTGAACATTTAAAT+AGG | - | chr1.1:15046078-15046097 | MS.gene33646:intron | 25.0% |
! | GAATGTGTTGTATTTATACA+AGG | - | chr1.1:15049153-15049172 | MS.gene33646:intron | 25.0% |
! | GCAAATTACAGTAATAAGAT+AGG | - | chr1.1:15049258-15049277 | MS.gene33646:intron | 25.0% |
! | GGTTCTTGACTTAATTAAAA+GGG | - | chr1.1:15048903-15048922 | MS.gene33646:intron | 25.0% |
! | TATTTCAAGAGAAGTTAACA+GGG | + | chr1.1:15044252-15044271 | None:intergenic | 25.0% |
! | TGTTCTTGTAAAAAGACTAA+GGG | - | chr1.1:15046972-15046991 | MS.gene33646:intron | 25.0% |
! | TTGTTCTTGTAAAAAGACTA+AGG | - | chr1.1:15046971-15046990 | MS.gene33646:intron | 25.0% |
! | TTGTTGCATATGCAAATATT+GGG | - | chr1.1:15045451-15045470 | MS.gene33646:intron | 25.0% |
! | TTTGTTGCATATGCAAATAT+TGG | - | chr1.1:15045450-15045469 | MS.gene33646:intron | 25.0% |
!! | AATAACAGTATGACGATTTT+TGG | - | chr1.1:15044349-15044368 | MS.gene33646:intron | 25.0% |
!! | ATCAAAACATTAGGGTTTTA+TGG | + | chr1.1:15047119-15047138 | None:intergenic | 25.0% |
!! | ATGTTTGAAGTATGTAGTAA+GGG | - | chr1.1:15047461-15047480 | MS.gene33646:CDS | 25.0% |
!! | GACATGCTTTTAATAAGATA+TGG | - | chr1.1:15045680-15045699 | MS.gene33646:intron | 25.0% |
!! | TAAACTATCGTGATTTTGTA+GGG | - | chr1.1:15048366-15048385 | MS.gene33646:intron | 25.0% |
!! | TAGACAGTCATGATTTTATA+AGG | + | chr1.1:15048201-15048220 | None:intergenic | 25.0% |
!! | TATGTTTGAAGTATGTAGTA+AGG | - | chr1.1:15047460-15047479 | MS.gene33646:CDS | 25.0% |
!! | TTAAACTATCGTGATTTTGT+AGG | - | chr1.1:15048365-15048384 | MS.gene33646:intron | 25.0% |
!! | TTGATATTTAGAGTCTGTTT+AGG | + | chr1.1:15046000-15046019 | None:intergenic | 25.0% |
!! | TTTCTGAAAAAGTTGATCTT+AGG | + | chr1.1:15044962-15044981 | None:intergenic | 25.0% |
!! | TTTTGCAATTAAAACGGAAA+AGG | - | chr1.1:15047070-15047089 | MS.gene33646:intron | 25.0% |
!!! | ATCCTAGTCTATTTTAGTAA+TGG | + | chr1.1:15047744-15047763 | None:intergenic | 25.0% |
!!! | CTTCATATTTTGAGGTTATA+GGG | + | chr1.1:15048149-15048168 | None:intergenic | 25.0% |
!!! | GCATTTAATTTTATGTTCTG+CGG | + | chr1.1:15044464-15044483 | None:intergenic | 25.0% |
!!! | GGTAAAAGTTTTATAGACTA+AGG | - | chr1.1:15048342-15048361 | MS.gene33646:intron | 25.0% |
!!! | GTCTGAATTTTCTGAAAAAT+AGG | - | chr1.1:15046880-15046899 | MS.gene33646:intron | 25.0% |
AAAGCTTACATATCTTCTGA+TGG | - | chr1.1:15045306-15045325 | MS.gene33646:intron | 30.0% | |
AACTATGAACACTATCAGTA+AGG | + | chr1.1:15045928-15045947 | None:intergenic | 30.0% | |
AAGAACACATATGAAGCTAT+GGG | + | chr1.1:15047858-15047877 | None:intergenic | 30.0% | |
AAGTCTTTCATGCTCTATTA+TGG | - | chr1.1:15047792-15047811 | MS.gene33646:intron | 30.0% | |
AATCATGCTACCATATACTT+AGG | + | chr1.1:15045750-15045769 | None:intergenic | 30.0% | |
AATGTTTGGCCTAATTTACT+AGG | + | chr1.1:15045105-15045124 | None:intergenic | 30.0% | |
ACTATGAACACTATCAGTAA+GGG | + | chr1.1:15045927-15045946 | None:intergenic | 30.0% | |
AGTAAATTAGGCCAAACATT+AGG | - | chr1.1:15045105-15045124 | MS.gene33646:CDS | 30.0% | |
ATATCTTACAGGACTATAGA+TGG | - | chr1.1:15048321-15048340 | MS.gene33646:intron | 30.0% | |
ATCAGAAGATATGTAAGCTT+TGG | + | chr1.1:15045307-15045326 | None:intergenic | 30.0% | |
ATGAACAGTATTTCATGTCA+CGG | - | chr1.1:15045572-15045591 | MS.gene33646:intron | 30.0% | |
CAAAACCTAAAAACAAGATG+AGG | - | chr1.1:15047046-15047065 | MS.gene33646:intron | 30.0% | |
CAGAATTTATAAACACAGCT+AGG | - | chr1.1:15045878-15045897 | MS.gene33646:intron | 30.0% | |
CCTATAACCTCAAAATATGA+AGG | - | chr1.1:15048147-15048166 | MS.gene33646:intron | 30.0% | |
CCTGTAAGATATAAAAACTG+TGG | + | chr1.1:15048313-15048332 | None:intergenic | 30.0% | |
GATTTGAATGATATTACGTG+TGG | + | chr1.1:15048127-15048146 | None:intergenic | 30.0% | |
GGAAAAGAAACCTAAGTATA+TGG | - | chr1.1:15045737-15045756 | MS.gene33646:intron | 30.0% | |
GTATTTCAAGAGAAGTTAAC+AGG | + | chr1.1:15044253-15044272 | None:intergenic | 30.0% | |
GTTCAAGGATCAAAACATTA+GGG | + | chr1.1:15047127-15047146 | None:intergenic | 30.0% | |
GTTGTTCTCATAAACTATCT+TGG | + | chr1.1:15047350-15047369 | None:intergenic | 30.0% | |
TAGGAAACAAAAATATTGCG+AGG | - | chr1.1:15046899-15046918 | MS.gene33646:intron | 30.0% | |
TAGTGACTTAATGTTTCTCT+TGG | - | chr1.1:15047823-15047842 | MS.gene33646:intron | 30.0% | |
TCTTGTAAGCAAAATCCTTA+GGG | - | chr1.1:15046838-15046857 | MS.gene33646:intron | 30.0% | |
TGAACATTTAAATAGGCTCT+AGG | - | chr1.1:15046085-15046104 | MS.gene33646:intron | 30.0% | |
TGACATCTACCTTGTAATAA+AGG | + | chr1.1:15044536-15044555 | None:intergenic | 30.0% | |
TGTAATGCACTTACAATCTT+TGG | - | chr1.1:15045854-15045873 | MS.gene33646:intron | 30.0% | |
TGTTCAAGGATCAAAACATT+AGG | + | chr1.1:15047128-15047147 | None:intergenic | 30.0% | |
TTAATGAAAACAGGTACCTA+TGG | - | chr1.1:15049553-15049572 | MS.gene33646:intron | 30.0% | |
TTACAAAAATAAGGCTTGCA+TGG | - | chr1.1:15049502-15049521 | MS.gene33646:intron | 30.0% | |
TTATCTACATGTGAAAACCA+TGG | + | chr1.1:15045169-15045188 | None:intergenic | 30.0% | |
TTGTTGATGTGGTAATTCTT+AGG | - | chr1.1:15047574-15047593 | MS.gene33646:CDS | 30.0% | |
TTGTTGCATCATTGACATAA+AGG | + | chr1.1:15046318-15046337 | None:intergenic | 30.0% | |
! | AACATCTTACAAGCATTGTT+TGG | + | chr1.1:15049048-15049067 | None:intergenic | 30.0% |
! | ATAGCTACTCTAGTTTGAAT+TGG | - | chr1.1:15047212-15047231 | MS.gene33646:CDS | 30.0% |
! | ATTAAGTTGTTTATCCCAAC+AGG | - | chr1.1:15047428-15047447 | MS.gene33646:CDS | 30.0% |
! | CCACAGTTTTTATATCTTAC+AGG | - | chr1.1:15048310-15048329 | MS.gene33646:intron | 30.0% |
! | CTTTGGTAATTATGAAGTCA+AGG | + | chr1.1:15045290-15045309 | None:intergenic | 30.0% |
! | GACATTTGAAGTATATATGC+AGG | - | chr1.1:15049181-15049200 | MS.gene33646:intron | 30.0% |
! | TGAGGGTTTTGCAATTAAAA+CGG | - | chr1.1:15047064-15047083 | MS.gene33646:intron | 30.0% |
! | TTAAGTTGTTTATCCCAACA+GGG | - | chr1.1:15047429-15047448 | MS.gene33646:CDS | 30.0% |
! | TTCACAACTAGTTGATACAA+GGG | + | chr1.1:15046069-15046088 | None:intergenic | 30.0% |
! | TTTGAGGTAGAATGACTAAA+TGG | - | chr1.1:15047535-15047554 | MS.gene33646:CDS | 30.0% |
!! | AGTAGGCTTTATCTTTGTTT+TGG | - | chr1.1:15045716-15045735 | MS.gene33646:intron | 30.0% |
!!! | AAAACCCTCATCTTGTTTTT+AGG | + | chr1.1:15047054-15047073 | None:intergenic | 30.0% |
!!! | ATTCAGTCATGGTTTTGATA+GGG | - | chr1.1:15049446-15049465 | MS.gene33646:intron | 30.0% |
!!! | CCTTCATATTTTGAGGTTAT+AGG | + | chr1.1:15048150-15048169 | None:intergenic | 30.0% |
!!! | TATTCAGTCATGGTTTTGAT+AGG | - | chr1.1:15049445-15049464 | MS.gene33646:intron | 30.0% |
!!! | TTACTGAAAGTGGTTTTAAC+AGG | + | chr1.1:15045060-15045079 | None:intergenic | 30.0% |
AACATAGTATTAGTCCCTGT+TGG | + | chr1.1:15047446-15047465 | None:intergenic | 35.0% | |
AAGGGAATTTCTACTGTGTT+TGG | + | chr1.1:15045909-15045928 | None:intergenic | 35.0% | |
AAGTGCATTACACACTCAAA+AGG | + | chr1.1:15045846-15045865 | None:intergenic | 35.0% | |
AAGTTGTTGTGTGTCAAACT+TGG | - | chr1.1:15048990-15049009 | MS.gene33646:intron | 35.0% | |
AATAGACTAGGATGAACTTC+TGG | - | chr1.1:15047751-15047770 | MS.gene33646:intron | 35.0% | |
AATGGTACGGTATACATACA+TGG | - | chr1.1:15047999-15048018 | MS.gene33646:intron | 35.0% | |
ACATAGTATTAGTCCCTGTT+GGG | + | chr1.1:15047445-15047464 | None:intergenic | 35.0% | |
ACATATCTTCTGATGGTAGT+TGG | - | chr1.1:15045313-15045332 | MS.gene33646:intron | 35.0% | |
ACATGTTATGATAGGGAAGA+TGG | + | chr1.1:15049080-15049099 | None:intergenic | 35.0% | |
AGAACACATATGAAGCTATG+GGG | + | chr1.1:15047857-15047876 | None:intergenic | 35.0% | |
AGCATGTCAGATAAAAATCG+AGG | + | chr1.1:15045668-15045687 | None:intergenic | 35.0% | |
AGTCTGTTTAGGAAATAGCA+GGG | + | chr1.1:15045989-15046008 | None:intergenic | 35.0% | |
AGTGCATTACACACTCAAAA+GGG | + | chr1.1:15045845-15045864 | None:intergenic | 35.0% | |
ATATCTCAGACAAAAGACCT+GGG | + | chr1.1:15046219-15046238 | None:intergenic | 35.0% | |
CAATGATGTTCATATCCACA+GGG | + | chr1.1:15048754-15048773 | None:intergenic | 35.0% | |
CATCATATCCACCAATGAAT+CGG | - | chr1.1:15048051-15048070 | MS.gene33646:intron | 35.0% | |
CCATATACCTCAATTTCACA+AGG | + | chr1.1:15044594-15044613 | None:intergenic | 35.0% | |
CCTTGTGAAATTGAGGTATA+TGG | - | chr1.1:15044591-15044610 | MS.gene33646:intron | 35.0% | |
CTAGAGTAAGCTTCTTCTTT+GGG | - | chr1.1:15048867-15048886 | MS.gene33646:intron | 35.0% | |
GAAGAACACATATGAAGCTA+TGG | + | chr1.1:15047859-15047878 | None:intergenic | 35.0% | |
GAGATGGACATGTTATGATA+GGG | + | chr1.1:15049087-15049106 | None:intergenic | 35.0% | |
GCAAATCAAGACTCAAAATG+AGG | + | chr1.1:15044771-15044790 | None:intergenic | 35.0% | |
GCATGGAGGAATGATTTAAA+TGG | - | chr1.1:15049519-15049538 | MS.gene33646:intron | 35.0% | |
GCTTATTTGAGCTTATCTAC+CGG | - | chr1.1:15047234-15047253 | MS.gene33646:CDS | 35.0% | |
GTCTTGTAAGCAAAATCCTT+AGG | - | chr1.1:15046837-15046856 | MS.gene33646:intron | 35.0% | |
GTGAAATTGAGGTATATGGT+GGG | - | chr1.1:15044595-15044614 | MS.gene33646:intron | 35.0% | |
TAATATGCATGATAGCTGGT+CGG | + | chr1.1:15048454-15048473 | None:intergenic | 35.0% | |
TAGCACTTGTGAAACTGTTT+GGG | - | chr1.1:15047260-15047279 | MS.gene33646:CDS | 35.0% | |
TATCAGCAAACAACATTTGG+TGG | + | chr1.1:15046486-15046505 | None:intergenic | 35.0% | |
TCAAAACCATGACTGAATAG+AGG | + | chr1.1:15049444-15049463 | None:intergenic | 35.0% | |
TCAATGATGTTCATATCCAC+AGG | + | chr1.1:15048755-15048774 | None:intergenic | 35.0% | |
TCATGCTCTATTATGGAACT+TGG | - | chr1.1:15047799-15047818 | MS.gene33646:intron | 35.0% | |
TCTCATAAACTATCTTGGAG+AGG | + | chr1.1:15047345-15047364 | None:intergenic | 35.0% | |
TGAGATGGACATGTTATGAT+AGG | + | chr1.1:15049088-15049107 | None:intergenic | 35.0% | |
TGTAGACTAAGTTGTTGATG+TGG | - | chr1.1:15047563-15047582 | MS.gene33646:CDS | 35.0% | |
TGTGAAATTGAGGTATATGG+TGG | - | chr1.1:15044594-15044613 | MS.gene33646:intron | 35.0% | |
TGTTTACAAACTACACCCTA+AGG | + | chr1.1:15046856-15046875 | None:intergenic | 35.0% | |
TTACACTCCTTGTGAAATTG+AGG | - | chr1.1:15044584-15044603 | MS.gene33646:intron | 35.0% | |
TTACGACATAGAAAGAAAGG+TGG | - | chr1.1:15049595-15049614 | MS.gene33646:intron | 35.0% | |
TTAGCACTTGTGAAACTGTT+TGG | - | chr1.1:15047259-15047278 | MS.gene33646:CDS | 35.0% | |
TTAGTGTGAGATGCAAAGAT+CGG | - | chr1.1:15046617-15046636 | MS.gene33646:intron | 35.0% | |
TTCTATGTGAGAGATGCATA+TGG | - | chr1.1:15048725-15048744 | MS.gene33646:intron | 35.0% | |
! | ACCAAATGTTGTTTGCTGAT+AGG | - | chr1.1:15046485-15046504 | MS.gene33646:intron | 35.0% |
! | ATGGTAGCAATGCTTTTAGT+AGG | - | chr1.1:15045699-15045718 | MS.gene33646:intron | 35.0% |
! | CCAAATGTTGTTTGCTGATA+GGG | - | chr1.1:15046486-15046505 | MS.gene33646:intron | 35.0% |
! | GCGGTAGCTTTACAAAAATA+AGG | - | chr1.1:15049493-15049512 | MS.gene33646:intron | 35.0% |
! | GTTCACAACTAGTTGATACA+AGG | + | chr1.1:15046070-15046089 | None:intergenic | 35.0% |
! | TTCTGATGGTAGTTGGTTTA+TGG | - | chr1.1:15045320-15045339 | MS.gene33646:intron | 35.0% |
!! | AGTCTTGATTTGCTATCTGA+AGG | - | chr1.1:15044778-15044797 | MS.gene33646:intron | 35.0% |
!! | ATTCTTAGGAGTACTTCATC+AGG | - | chr1.1:15047588-15047607 | MS.gene33646:CDS | 35.0% |
!! | ATTGATAGCGTCAATAAACC+CGG | - | chr1.1:15045231-15045250 | MS.gene33646:intron | 35.0% |
!! | TTGTTTTGTTGCGAATGGTA+CGG | - | chr1.1:15047986-15048005 | MS.gene33646:intron | 35.0% |
!!! | GAGGAATTTTTTAGTTCAGC+TGG | - | chr1.1:15046918-15046937 | MS.gene33646:intron | 35.0% |
!!! | TTCAGTCATGGTTTTGATAG+GGG | - | chr1.1:15049447-15049466 | MS.gene33646:intron | 35.0% |
AAACTCTGTTTCCAATTCGC+AGG | - | chr1.1:15044655-15044674 | MS.gene33646:intron | 40.0% | |
AACTCTGTTTCCAATTCGCA+GGG | - | chr1.1:15044656-15044675 | MS.gene33646:intron | 40.0% | |
AATATGCATGATAGCTGGTC+GGG | + | chr1.1:15048453-15048472 | None:intergenic | 40.0% | |
AATGGCTGTATGATCACCAA+TGG | + | chr1.1:15046176-15046195 | None:intergenic | 40.0% | |
ACTAGGATTCTACGAGAGAA+CGG | - | chr1.1:15048647-15048666 | MS.gene33646:intron | 40.0% | |
ACTCGCGTCTTAATGAAAAC+AGG | - | chr1.1:15049544-15049563 | MS.gene33646:intron | 40.0% | |
AGAACGGCTTAACAGTTTGT+AGG | - | chr1.1:15048663-15048682 | MS.gene33646:intron | 40.0% | |
AGCACGAATGTGTATGTTGT+AGG | + | chr1.1:15045495-15045514 | None:intergenic | 40.0% | |
AGTTTCACAAGTGCTAATGC+CGG | + | chr1.1:15047256-15047275 | None:intergenic | 40.0% | |
ATGCATACCTGTGAAGCATA+TGG | + | chr1.1:15046724-15046743 | None:intergenic | 40.0% | |
ATGGTCAGATACAATCTGAG+TGG | + | chr1.1:15048034-15048053 | None:intergenic | 40.0% | |
ATGTGATTGCAGCTGAAGTT+TGG | - | chr1.1:15046266-15046285 | MS.gene33646:intron | 40.0% | |
ATTCAGTCCTTTCTCTCCTA+TGG | + | chr1.1:15048702-15048721 | None:intergenic | 40.0% | |
CAAAAATAAGGCTTGCATGG+AGG | - | chr1.1:15049505-15049524 | MS.gene33646:intron | 40.0% | |
CAGAAGAAGTTGCTCGTTTA+TGG | - | chr1.1:15044631-15044650 | MS.gene33646:intron | 40.0% | |
CAGCTGCAATCACATTGAAT+TGG | + | chr1.1:15046261-15046280 | None:intergenic | 40.0% | |
CATAAACGAGCAACTTCTTC+TGG | + | chr1.1:15044633-15044652 | None:intergenic | 40.0% | |
CATCAAACTCTGACATGACA+TGG | - | chr1.1:15049348-15049367 | MS.gene33646:intron | 40.0% | |
CATGTCATGTCAGAGTTTGA+TGG | + | chr1.1:15049350-15049369 | None:intergenic | 40.0% | |
CATTCAAAGAAGAGTAAGCG+AGG | - | chr1.1:15047679-15047698 | MS.gene33646:CDS | 40.0% | |
CCATGATTGTACACTGATCA+AGG | - | chr1.1:15044701-15044720 | MS.gene33646:intron | 40.0% | |
CCCTATCAGCAAACAACATT+TGG | + | chr1.1:15046489-15046508 | None:intergenic | 40.0% | |
CCTTGATCAGTGTACAATCA+TGG | + | chr1.1:15044704-15044723 | None:intergenic | 40.0% | |
CTCGCTTACTCTTCTTTGAA+TGG | + | chr1.1:15047681-15047700 | None:intergenic | 40.0% | |
CTGAAGTTTGGACTCATAAC+AGG | - | chr1.1:15046278-15046297 | MS.gene33646:intron | 40.0% | |
GAACGGCTTAACAGTTTGTA+GGG | - | chr1.1:15048664-15048683 | MS.gene33646:intron | 40.0% | |
GAATGTGTATGTTGTAGGCA+AGG | + | chr1.1:15045490-15045509 | None:intergenic | 40.0% | |
GAGTCTGTTTAGGAAATAGC+AGG | + | chr1.1:15045990-15046009 | None:intergenic | 40.0% | |
GATATCTCAGACAAAAGACC+TGG | + | chr1.1:15046220-15046239 | None:intergenic | 40.0% | |
GATATTACGTGTGGAGCATA+AGG | + | chr1.1:15048118-15048137 | None:intergenic | 40.0% | |
GCAAACAAAGGATGTGTTCA+AGG | + | chr1.1:15047142-15047161 | None:intergenic | 40.0% | |
GCTAGAGTAAGCTTCTTCTT+TGG | - | chr1.1:15048866-15048885 | MS.gene33646:intron | 40.0% | |
GGGTTACGACATAGAAAGAA+AGG | - | chr1.1:15049592-15049611 | MS.gene33646:intron | 40.0% | |
GTGCATTACACACTCAAAAG+GGG | + | chr1.1:15045844-15045863 | None:intergenic | 40.0% | |
TAGAAAGAAAGGTGGAGGTT+AGG | - | chr1.1:15049603-15049622 | MS.gene33646:CDS | 40.0% | |
TAGTGTGAGATGCAAAGATC+GGG | - | chr1.1:15046618-15046637 | MS.gene33646:intron | 40.0% | |
TCGGGCATAAATATGACTGA+TGG | + | chr1.1:15048435-15048454 | None:intergenic | 40.0% | |
TGAAGAAAAAGGCTACTCAG+TGG | - | chr1.1:15046594-15046613 | MS.gene33646:intron | 40.0% | |
TGTAACCTATGACACCACTA+GGG | + | chr1.1:15044569-15044588 | None:intergenic | 40.0% | |
TGTGATGGTCAATGTGAAGA+AGG | - | chr1.1:15048802-15048821 | MS.gene33646:intron | 40.0% | |
TTATGAAGTCAAGGTCTGTC+AGG | + | chr1.1:15045281-15045300 | None:intergenic | 40.0% | |
TTGAATCATCATCCACAGCT+TGG | + | chr1.1:15046342-15046361 | None:intergenic | 40.0% | |
TTGTGAGGATGATGAGAATG+TGG | - | chr1.1:15046408-15046427 | MS.gene33646:intron | 40.0% | |
TTTGGTCAACAAAAAGCCAC+AGG | + | chr1.1:15044838-15044857 | None:intergenic | 40.0% | |
! | ATGGGTATGGACTAATCCAT+GGG | + | chr1.1:15049376-15049395 | None:intergenic | 40.0% |
! | CGATTCATTGGTGGATATGA+TGG | + | chr1.1:15048053-15048072 | None:intergenic | 40.0% |
! | CTTCTTCTTTGGGAACTTGT+TGG | - | chr1.1:15048877-15048896 | MS.gene33646:intron | 40.0% |
! | GATGGTAGTTGGTTTATGGA+TGG | - | chr1.1:15045324-15045343 | MS.gene33646:intron | 40.0% |
!! | AAATAGGCTCTAGGACCAAA+GGG | - | chr1.1:15046094-15046113 | MS.gene33646:intron | 40.0% |
!! | AACTAATGATGATGGCCTCT+TGG | + | chr1.1:15045136-15045155 | None:intergenic | 40.0% |
!! | ACTAATGATGATGGCCTCTT+GGG | + | chr1.1:15045135-15045154 | None:intergenic | 40.0% |
!! | GAAGCACTGCGTAAAGAAAT+TGG | - | chr1.1:15048773-15048792 | MS.gene33646:intron | 40.0% |
!! | GTTTTGATAGGGGAAAGATG+TGG | - | chr1.1:15049457-15049476 | MS.gene33646:intron | 40.0% |
!! | TAAATAGGCTCTAGGACCAA+AGG | - | chr1.1:15046093-15046112 | MS.gene33646:intron | 40.0% |
!! | TCTTTGGGAACTTGTTGGAA+AGG | - | chr1.1:15048882-15048901 | MS.gene33646:intron | 40.0% |
!!! | TCTGCTTGTTTTGTTGCGAA+TGG | - | chr1.1:15047981-15048000 | MS.gene33646:intron | 40.0% |
!!! | TTTTTAGTTCAGCTGGCCAA+AGG | - | chr1.1:15046925-15046944 | MS.gene33646:intron | 40.0% |
AAACATTAGGCTACCCCAAG+AGG | - | chr1.1:15045118-15045137 | MS.gene33646:CDS | 45.0% | |
ACACTGAAGGGGAGAAAGAA+AGG | - | chr1.1:15047633-15047652 | MS.gene33646:CDS | 45.0% | |
ACTTGGACAGTGCTTGAACT+TGG | - | chr1.1:15049007-15049026 | MS.gene33646:intron | 45.0% | |
AGAAATTGGCCAGACTGTGA+TGG | - | chr1.1:15048787-15048806 | MS.gene33646:intron | 45.0% | |
AGATGCATATGGAAACCCTG+TGG | - | chr1.1:15048736-15048755 | MS.gene33646:intron | 45.0% | |
AGTAAACTGCCTTGTGCAGA+TGG | + | chr1.1:15049395-15049414 | None:intergenic | 45.0% | |
ATAGCAGGGTAGATACTAGC+AGG | + | chr1.1:15045975-15045994 | None:intergenic | 45.0% | |
ATATGGCCCTTCAGATGAGA+TGG | + | chr1.1:15046707-15046726 | None:intergenic | 45.0% | |
ATCCACCAATGAATCGGTGA+CGG | - | chr1.1:15048057-15048076 | MS.gene33646:intron | 45.0% | |
ATGCACACTTGACACTGAAG+GGG | - | chr1.1:15047622-15047641 | MS.gene33646:CDS | 45.0% | |
ATGCCTCCATCTCATCTGAA+GGG | - | chr1.1:15046698-15046717 | MS.gene33646:intron | 45.0% | |
ATGGTCTCAGTGACAAAGCA+GGG | - | chr1.1:15049572-15049591 | MS.gene33646:intron | 45.0% | |
CAAAACAAGCAGATAGCTGC+AGG | + | chr1.1:15047974-15047993 | None:intergenic | 45.0% | |
CAAGTGACGTAAAACTCCAG+TGG | + | chr1.1:15044812-15044831 | None:intergenic | 45.0% | |
CAATAAACCCGGAATTCTGC+TGG | - | chr1.1:15045242-15045261 | MS.gene33646:intron | 45.0% | |
CACTGAAGGGGAGAAAGAAA+GGG | - | chr1.1:15047634-15047653 | MS.gene33646:CDS | 45.0% | |
CATACAGCCATTGAGCTCAT+TGG | - | chr1.1:15046184-15046203 | MS.gene33646:CDS | 45.0% | |
CGACATAGAAAGAAAGGTGG+AGG | - | chr1.1:15049598-15049617 | MS.gene33646:CDS | 45.0% | |
CTGTGTGCAAAGGATAGAGT+GGG | - | chr1.1:15048608-15048627 | MS.gene33646:intron | 45.0% | |
GATGCACACTTGACACTGAA+GGG | - | chr1.1:15047621-15047640 | MS.gene33646:CDS | 45.0% | |
GCAACAGAATCAATCCTCCA+AGG | - | chr1.1:15044224-15044243 | MS.gene33646:CDS | 45.0% | |
GTAAACTGCCTTGTGCAGAT+GGG | + | chr1.1:15049394-15049413 | None:intergenic | 45.0% | |
GTCATCAGTTCAATCCCTAG+TGG | - | chr1.1:15044552-15044571 | MS.gene33646:intron | 45.0% | |
GTCGTTACCATTGATCCTCT+GGG | - | chr1.1:15048558-15048577 | MS.gene33646:CDS | 45.0% | |
GTGTAACCTATGACACCACT+AGG | + | chr1.1:15044570-15044589 | None:intergenic | 45.0% | |
GTGTCAACCATAGGAGAGAA+AGG | - | chr1.1:15048692-15048711 | MS.gene33646:intron | 45.0% | |
GTTGCTGAAGTTCTCGTACT+CGG | + | chr1.1:15044209-15044228 | None:intergenic | 45.0% | |
TACACACTCAAAAGGGGAGA+CGG | + | chr1.1:15045838-15045857 | None:intergenic | 45.0% | |
TATCCTTTGCACACAGCTCA+AGG | + | chr1.1:15048604-15048623 | None:intergenic | 45.0% | |
TATGGTCTCAGTGACAAAGC+AGG | - | chr1.1:15049571-15049590 | MS.gene33646:intron | 45.0% | |
TCACATTGACCATCACAGTC+TGG | + | chr1.1:15048799-15048818 | None:intergenic | 45.0% | |
TCGATATTGGGCCTGAAAGA+GGG | + | chr1.1:15046562-15046581 | None:intergenic | 45.0% | |
TCGTACTCGGGATCAAAGTA+TGG | + | chr1.1:15044196-15044215 | None:intergenic | 45.0% | |
TCTTGGGGTAGCCTAATGTT+TGG | + | chr1.1:15045119-15045138 | None:intergenic | 45.0% | |
TGAAGAGTTGGGAAGGCAAA+CGG | - | chr1.1:15046137-15046156 | MS.gene33646:intron | 45.0% | |
TGATGCAACAAACCAAGCTG+TGG | - | chr1.1:15046327-15046346 | MS.gene33646:intron | 45.0% | |
TGCTTTGTCACTGAGACCAT+AGG | + | chr1.1:15049572-15049591 | None:intergenic | 45.0% | |
TGTCGTTACCATTGATCCTC+TGG | - | chr1.1:15048557-15048576 | MS.gene33646:CDS | 45.0% | |
TGTCTGCACTCTTACTGACA+TGG | - | chr1.1:15046660-15046679 | MS.gene33646:intron | 45.0% | |
TGTTGTAGGCAAGGTTTGCA+TGG | + | chr1.1:15045481-15045500 | None:intergenic | 45.0% | |
TTCGATATTGGGCCTGAAAG+AGG | + | chr1.1:15046563-15046582 | None:intergenic | 45.0% | |
TTGATTCTCCTCCCTCTTTC+AGG | - | chr1.1:15046548-15046567 | MS.gene33646:intron | 45.0% | |
TTGCTGAAGTTCTCGTACTC+GGG | + | chr1.1:15044208-15044227 | None:intergenic | 45.0% | |
TTTACGTCACTTGTGTCCTG+TGG | - | chr1.1:15044819-15044838 | MS.gene33646:intron | 45.0% | |
TTTCATGTCACGGATCAGCA+AGG | - | chr1.1:15045582-15045601 | MS.gene33646:intron | 45.0% | |
! | AATGAATCGGTGACGGTTGA+TGG | - | chr1.1:15048064-15048083 | MS.gene33646:intron | 45.0% |
! | GATAGGGATTATGAGAGTGC+TGG | - | chr1.1:15046502-15046521 | MS.gene33646:intron | 45.0% |
! | GATGGGTATGGACTAATCCA+TGG | + | chr1.1:15049377-15049396 | None:intergenic | 45.0% |
!! | ATCAACCGTCACCGATTCAT+TGG | + | chr1.1:15048065-15048084 | None:intergenic | 45.0% |
!! | CTAATGATGATGGCCTCTTG+GGG | + | chr1.1:15045134-15045153 | None:intergenic | 45.0% |
!! | TCAATCCCTAGTGGTGTCAT+AGG | - | chr1.1:15044561-15044580 | MS.gene33646:intron | 45.0% |
AAGCTCAACCACATCCTTCG+TGG | - | chr1.1:15046385-15046404 | MS.gene33646:intron | 50.0% | |
ACACACTCAAAAGGGGAGAC+GGG | + | chr1.1:15045837-15045856 | None:intergenic | 50.0% | |
ACCAGAAACCTCTCGAGGAT+GGG | - | chr1.1:15048844-15048863 | MS.gene33646:intron | 50.0% | |
ACCATTGATCCTCTGGGTGA+TGG | - | chr1.1:15048564-15048583 | MS.gene33646:CDS | 50.0% | |
ACGACTTCCAGCAGAATTCC+GGG | + | chr1.1:15045252-15045271 | None:intergenic | 50.0% | |
ACGCTGCCTCTATTCAGTCA+TGG | - | chr1.1:15049435-15049454 | MS.gene33646:intron | 50.0% | |
AGACGGGTGTAGTGCTTAAC+TGG | + | chr1.1:15045821-15045840 | None:intergenic | 50.0% | |
AGCCATTGAGCTCATTGGTC+GGG | - | chr1.1:15046189-15046208 | MS.gene33646:CDS | 50.0% | |
AGGATGATGAGAATGTGGCC+AGG | - | chr1.1:15046413-15046432 | MS.gene33646:intron | 50.0% | |
AGTCCATACCCATCTGCACA+AGG | - | chr1.1:15049383-15049402 | MS.gene33646:intron | 50.0% | |
ATATTGGGCCTGAAAGAGGG+AGG | + | chr1.1:15046559-15046578 | None:intergenic | 50.0% | |
ATGTGGTGCATGAAGTAGCG+CGG | - | chr1.1:15049474-15049493 | MS.gene33646:intron | 50.0% | |
CACGACTTCCAGCAGAATTC+CGG | + | chr1.1:15045253-15045272 | None:intergenic | 50.0% | |
CAGCCATTGAGCTCATTGGT+CGG | - | chr1.1:15046188-15046207 | MS.gene33646:CDS | 50.0% | |
CATCATCCTCACAACCACGA+AGG | + | chr1.1:15046402-15046421 | None:intergenic | 50.0% | |
CATGCCTCCATCTCATCTGA+AGG | - | chr1.1:15046697-15046716 | MS.gene33646:intron | 50.0% | |
CATTGAATTGGAAGCTCGCC+AGG | + | chr1.1:15046249-15046268 | None:intergenic | 50.0% | |
CCCAACTCTTCACACCTTCT+GGG | + | chr1.1:15046129-15046148 | None:intergenic | 50.0% | |
GAAGAGTTGGGAAGGCAAAC+GGG | - | chr1.1:15046138-15046157 | MS.gene33646:intron | 50.0% | |
GACGTAAAACTCCAGTGGCT+AGG | + | chr1.1:15044807-15044826 | None:intergenic | 50.0% | |
GACTGAATAGAGGCAGCGTA+CGG | + | chr1.1:15049434-15049453 | None:intergenic | 50.0% | |
GCTGTGTGCAAAGGATAGAG+TGG | - | chr1.1:15048607-15048626 | MS.gene33646:intron | 50.0% | |
GGATGCACACTTGACACTGA+AGG | - | chr1.1:15047620-15047639 | MS.gene33646:CDS | 50.0% | |
GGCTTAACAGTTTGTAGGGC+AGG | - | chr1.1:15048668-15048687 | MS.gene33646:intron | 50.0% | |
GGTGAAACCCATGGAGAAAC+TGG | + | chr1.1:15046440-15046459 | None:intergenic | 50.0% | |
TACTTCATCAGGCACGTGGA+TGG | - | chr1.1:15047599-15047618 | MS.gene33646:CDS | 50.0% | |
TAGTTCAGCTGGCCAAAGGA+AGG | - | chr1.1:15046929-15046948 | MS.gene33646:intron | 50.0% | |
TCCAATTCGCAGGGTCTCTA+TGG | - | chr1.1:15044665-15044684 | MS.gene33646:intron | 50.0% | |
TCCATAGAGACCCTGCGAAT+TGG | + | chr1.1:15044669-15044688 | None:intergenic | 50.0% | |
TCCATCACCCAGAGGATCAA+TGG | + | chr1.1:15048568-15048587 | None:intergenic | 50.0% | |
TCCCAACTCTTCACACCTTC+TGG | + | chr1.1:15046130-15046149 | None:intergenic | 50.0% | |
TCTCAGACAAAAGACCTGGG+CGG | + | chr1.1:15046216-15046235 | None:intergenic | 50.0% | |
TCTGAAGGAAACCTAGCCAC+TGG | - | chr1.1:15044793-15044812 | MS.gene33646:intron | 50.0% | |
TGAAGGGCCATATGCTTCAC+AGG | - | chr1.1:15046714-15046733 | MS.gene33646:intron | 50.0% | |
! | AAAGCACCAGAAACCTCTCG+AGG | - | chr1.1:15048839-15048858 | MS.gene33646:intron | 50.0% |
! | AAGTTAACAGGGCACCTTGG+AGG | + | chr1.1:15044241-15044260 | None:intergenic | 50.0% |
! | CCCAGAAGGTGTGAAGAGTT+GGG | - | chr1.1:15046126-15046145 | MS.gene33646:intron | 50.0% |
! | GAAGGTGTGAAGAGTTGGGA+AGG | - | chr1.1:15046130-15046149 | MS.gene33646:intron | 50.0% |
! | GAGAAGTTAACAGGGCACCT+TGG | + | chr1.1:15044244-15044263 | None:intergenic | 50.0% |
! | GTCTGAGATATCAGCTGTCC+TGG | - | chr1.1:15046228-15046247 | MS.gene33646:intron | 50.0% |
!! | AACCGTCACCGATTCATTGG+TGG | + | chr1.1:15048062-15048081 | None:intergenic | 50.0% |
!! | AGGGATTATGAGAGTGCTGG+TGG | - | chr1.1:15046505-15046524 | MS.gene33646:intron | 50.0% |
!! | GCTTGCTGTCTGAAGTGACT+AGG | - | chr1.1:15048630-15048649 | MS.gene33646:intron | 50.0% |
!! | GGTTTCTGGTGCTTTGGTGT+TGG | + | chr1.1:15048834-15048853 | None:intergenic | 50.0% |
!! | TCGAGAGGTTTCTGGTGCTT+TGG | + | chr1.1:15048840-15048859 | None:intergenic | 50.0% |
ACCCATGGAGAAACTGGTCC+TGG | + | chr1.1:15046434-15046453 | None:intergenic | 55.0% | |
AGGGCAGGTGTGTCAACCAT+AGG | - | chr1.1:15048683-15048702 | MS.gene33646:intron | 55.0% | |
AGTTGGGAAGGCAAACGGGT+TGG | - | chr1.1:15046142-15046161 | MS.gene33646:CDS | 55.0% | |
CACCAGAAACCTCTCGAGGA+TGG | - | chr1.1:15048843-15048862 | MS.gene33646:intron | 55.0% | |
CCACATCCTTCGTGGTTGTG+AGG | - | chr1.1:15046393-15046412 | MS.gene33646:intron | 55.0% | |
CCTCACAACCACGAAGGATG+TGG | + | chr1.1:15046396-15046415 | None:intergenic | 55.0% | |
CCTTCACCCACATGGACAGA+AGG | - | chr1.1:15046458-15046477 | MS.gene33646:intron | 55.0% | |
CCTTCTGTCCATGTGGGTGA+AGG | + | chr1.1:15046461-15046480 | None:intergenic | 55.0% | |
CTGACATGACATGGCTCCCA+TGG | - | chr1.1:15049357-15049376 | MS.gene33646:intron | 55.0% | |
CTGCCTTGTGCAGATGGGTA+TGG | + | chr1.1:15049389-15049408 | None:intergenic | 55.0% | |
GAGCCTTGAGCTGTGTGCAA+AGG | - | chr1.1:15048598-15048617 | MS.gene33646:intron | 55.0% | |
GCCAGGACCAGTTTCTCCAT+GGG | - | chr1.1:15046430-15046449 | MS.gene33646:intron | 55.0% | |
GGGTTTCACCTTCACCCACA+TGG | - | chr1.1:15046450-15046469 | MS.gene33646:intron | 55.0% | |
GTCCCGACCAATGAGCTCAA+TGG | + | chr1.1:15046194-15046213 | None:intergenic | 55.0% | |
GTGGAGCCTTCTGTCCATGT+GGG | + | chr1.1:15046467-15046486 | None:intergenic | 55.0% | |
GTGGGTGAAGGTGAAACCCA+TGG | + | chr1.1:15046449-15046468 | None:intergenic | 55.0% | |
TACTCTAGCCCATCCTCGAG+AGG | + | chr1.1:15048855-15048874 | None:intergenic | 55.0% | |
TGGCCCTTCAGATGAGATGG+AGG | + | chr1.1:15046704-15046723 | None:intergenic | 55.0% | |
! | GCCCAGAAGGTGTGAAGAGT+TGG | - | chr1.1:15046125-15046144 | MS.gene33646:intron | 55.0% |
! | GGAGTACTTCATCAGGCACG+TGG | - | chr1.1:15047595-15047614 | MS.gene33646:CDS | 55.0% |
!! | ATCCTCTGGGTGATGGACAC+AGG | - | chr1.1:15048571-15048590 | MS.gene33646:CDS | 55.0% |
!! | CGGGTTGGCATTCACTCCAT+TGG | - | chr1.1:15046157-15046176 | MS.gene33646:CDS | 55.0% |
!! | TAGGCTCTAGGACCAAAGGG+TGG | - | chr1.1:15046097-15046116 | MS.gene33646:intron | 55.0% |
!! | TCCTCTGGGTGATGGACACA+GGG | - | chr1.1:15048572-15048591 | MS.gene33646:CDS | 55.0% |
!! | TCTGGTGCTTTGGTGTTGGC+TGG | + | chr1.1:15048830-15048849 | None:intergenic | 55.0% |
AAGGGTGGCAAGAGCCCAGA+AGG | - | chr1.1:15046112-15046131 | MS.gene33646:intron | 60.0% | |
AAGGTGGAGGTTAGGCAGCG+AGG | - | chr1.1:15049611-15049630 | MS.gene33646:CDS | 60.0% | |
ACCCTGTGTCCATCACCCAG+AGG | + | chr1.1:15048576-15048595 | None:intergenic | 60.0% | |
GCCCATCCTCGAGAGGTTTC+TGG | + | chr1.1:15048848-15048867 | None:intergenic | 60.0% | |
GGCCAGGACCAGTTTCTCCA+TGG | - | chr1.1:15046429-15046448 | MS.gene33646:intron | 60.0% | |
GGTGGAGCCTTCTGTCCATG+TGG | + | chr1.1:15046468-15046487 | None:intergenic | 60.0% | |
TCTGGGCTCTTGCCACCCTT+TGG | + | chr1.1:15046112-15046131 | None:intergenic | 60.0% | |
GGAGGTTAGGCAGCGAGGAG+CGG | - | chr1.1:15049616-15049635 | MS.gene33646:CDS | 65.0% | |
CTCATTGGTCGGGACCGCCC+AGG | - | chr1.1:15046199-15046218 | MS.gene33646:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 15044175 | 15049667 | 15044175 | ID=MS.gene33646 |
chr1.1 | mRNA | 15044175 | 15049667 | 15044175 | ID=MS.gene33646.t1;Parent=MS.gene33646 |
chr1.1 | exon | 15049597 | 15049667 | 15049597 | ID=MS.gene33646.t1.exon1;Parent=MS.gene33646.t1 |
chr1.1 | CDS | 15049597 | 15049667 | 15049597 | ID=cds.MS.gene33646.t1;Parent=MS.gene33646.t1 |
chr1.1 | exon | 15049120 | 15049165 | 15049120 | ID=MS.gene33646.t1.exon2;Parent=MS.gene33646.t1 |
chr1.1 | CDS | 15049120 | 15049165 | 15049120 | ID=cds.MS.gene33646.t1;Parent=MS.gene33646.t1 |
chr1.1 | exon | 15048497 | 15048611 | 15048497 | ID=MS.gene33646.t1.exon3;Parent=MS.gene33646.t1 |
chr1.1 | CDS | 15048497 | 15048611 | 15048497 | ID=cds.MS.gene33646.t1;Parent=MS.gene33646.t1 |
chr1.1 | exon | 15048195 | 15048262 | 15048195 | ID=MS.gene33646.t1.exon4;Parent=MS.gene33646.t1 |
chr1.1 | CDS | 15048195 | 15048262 | 15048195 | ID=cds.MS.gene33646.t1;Parent=MS.gene33646.t1 |
chr1.1 | exon | 15047107 | 15047742 | 15047107 | ID=MS.gene33646.t1.exon5;Parent=MS.gene33646.t1 |
chr1.1 | CDS | 15047107 | 15047742 | 15047107 | ID=cds.MS.gene33646.t1;Parent=MS.gene33646.t1 |
chr1.1 | exon | 15046142 | 15046246 | 15046142 | ID=MS.gene33646.t1.exon6;Parent=MS.gene33646.t1 |
chr1.1 | CDS | 15046142 | 15046246 | 15046142 | ID=cds.MS.gene33646.t1;Parent=MS.gene33646.t1 |
chr1.1 | exon | 15044971 | 15045249 | 15044971 | ID=MS.gene33646.t1.exon7;Parent=MS.gene33646.t1 |
chr1.1 | CDS | 15044971 | 15045249 | 15044971 | ID=cds.MS.gene33646.t1;Parent=MS.gene33646.t1 |
chr1.1 | exon | 15044175 | 15044276 | 15044175 | ID=MS.gene33646.t1.exon8;Parent=MS.gene33646.t1 |
chr1.1 | CDS | 15044175 | 15044276 | 15044175 | ID=cds.MS.gene33646.t1;Parent=MS.gene33646.t1 |
Gene Sequence |
Protein sequence |