Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33741.t1 | XP_003608194.2 | 98.4 | 493 | 8 | 0 | 1 | 493 | 1 | 493 | 7.70E-284 | 985.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33741.t1 | Q8GWA1 | 66.1 | 460 | 144 | 2 | 34 | 493 | 13 | 460 | 3.5e-176 | 619.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33741.t1 | G7JQS9 | 98.4 | 493 | 8 | 0 | 1 | 493 | 1 | 493 | 5.6e-284 | 985.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049413 | MS.gene33741 | 0.814208 | 1.73E-51 | -1.69E-46 |
| MS.gene051959 | MS.gene33741 | 0.808763 | 2.64E-50 | -1.69E-46 |
| MS.gene051960 | MS.gene33741 | 0.816403 | 5.63E-52 | -1.69E-46 |
| MS.gene052053 | MS.gene33741 | 0.800619 | 1.32E-48 | -1.69E-46 |
| MS.gene052537 | MS.gene33741 | 0.937493 | 3.17E-98 | -1.69E-46 |
| MS.gene052570 | MS.gene33741 | 0.823597 | 1.27E-53 | -1.69E-46 |
| MS.gene059698 | MS.gene33741 | 0.807596 | 4.68E-50 | -1.69E-46 |
| MS.gene060522 | MS.gene33741 | 0.803743 | 3.01E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33741.t1 | MTR_4g090580 | 98.377 | 493 | 8 | 0 | 1 | 493 | 1 | 493 | 0.0 | 1005 |
| MS.gene33741.t1 | MTR_5g071250 | 74.627 | 402 | 102 | 0 | 92 | 493 | 50 | 451 | 0.0 | 628 |
| MS.gene33741.t1 | MTR_3g464380 | 68.610 | 446 | 134 | 3 | 54 | 493 | 9 | 454 | 0.0 | 611 |
| MS.gene33741.t1 | MTR_5g071250 | 75.291 | 344 | 85 | 0 | 92 | 435 | 50 | 393 | 0.0 | 542 |
| MS.gene33741.t1 | MTR_4g091240 | 38.611 | 360 | 200 | 9 | 105 | 449 | 51 | 404 | 1.55e-72 | 240 |
| MS.gene33741.t1 | MTR_2g011730 | 39.595 | 346 | 193 | 8 | 105 | 440 | 51 | 390 | 4.25e-72 | 239 |
| MS.gene33741.t1 | MTR_4g045997 | 37.500 | 384 | 211 | 11 | 81 | 449 | 37 | 406 | 1.56e-67 | 226 |
| MS.gene33741.t1 | MTR_4g045997 | 37.368 | 380 | 217 | 10 | 81 | 449 | 37 | 406 | 2.07e-67 | 227 |
| MS.gene33741.t1 | MTR_4g045993 | 35.150 | 367 | 200 | 10 | 105 | 455 | 44 | 388 | 7.06e-65 | 220 |
| MS.gene33741.t1 | MTR_4g091240 | 35.644 | 303 | 176 | 8 | 162 | 449 | 2 | 300 | 4.81e-52 | 183 |
| MS.gene33741.t1 | MTR_0931s0010 | 29.650 | 371 | 228 | 11 | 122 | 489 | 254 | 594 | 2.82e-31 | 128 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33741.t1 | AT1G07180 | 66.087 | 460 | 144 | 2 | 34 | 493 | 13 | 460 | 0.0 | 602 |
| MS.gene33741.t1 | AT2G29990 | 71.464 | 403 | 115 | 0 | 91 | 493 | 56 | 458 | 0.0 | 597 |
| MS.gene33741.t1 | AT4G21490 | 35.765 | 425 | 226 | 11 | 46 | 455 | 3 | 395 | 9.85e-67 | 225 |
| MS.gene33741.t1 | AT4G21490 | 35.765 | 425 | 225 | 11 | 46 | 455 | 3 | 394 | 1.53e-66 | 224 |
| MS.gene33741.t1 | AT4G28220 | 38.576 | 337 | 188 | 9 | 109 | 434 | 52 | 380 | 2.40e-66 | 222 |
| MS.gene33741.t1 | AT4G28220 | 38.209 | 335 | 192 | 8 | 109 | 434 | 52 | 380 | 1.22e-65 | 222 |
| MS.gene33741.t1 | AT4G05020 | 41.745 | 321 | 175 | 7 | 105 | 417 | 57 | 373 | 3.39e-64 | 218 |
| MS.gene33741.t1 | AT4G05020 | 41.745 | 321 | 175 | 7 | 105 | 417 | 57 | 373 | 9.91e-64 | 218 |
| MS.gene33741.t1 | AT2G20800 | 36.193 | 373 | 200 | 8 | 103 | 461 | 60 | 408 | 3.46e-57 | 199 |
| MS.gene33741.t1 | AT5G08740 | 24.395 | 496 | 275 | 21 | 33 | 487 | 20 | 456 | 1.58e-15 | 79.3 |
Find 0 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACATTTTAAATTTTAATATC+TGG | - | 33330:12570-12589 | MS.gene33741:intergenic | 10.0% |
| !!! | ATTTGTTATAATAATTATGC+AGG | + | 33330:11902-11921 | MS.gene33741:intron | 15.0% |
| !! | AAGACAATATAGATAAATGT+CGG | - | 33330:12849-12868 | MS.gene33741:intergenic | 20.0% |
| !! | AATGTAAAAAATTCCAATAG+AGG | + | 33330:12876-12895 | MS.gene33741:intron | 20.0% |
| !! | AATTATGAAAAGTTAAACAG+TGG | - | 33330:12216-12235 | MS.gene33741:intergenic | 20.0% |
| !! | AATTTGTGTATAAACATATG+GGG | + | 33330:13173-13192 | MS.gene33741:CDS | 20.0% |
| !! | ACAATTTGTGTATAAACATA+TGG | + | 33330:13171-13190 | MS.gene33741:CDS | 20.0% |
| !! | ATGTAAAAAATTCCAATAGA+GGG | + | 33330:12877-12896 | MS.gene33741:intron | 20.0% |
| !! | CAATTTGTGTATAAACATAT+GGG | + | 33330:13172-13191 | MS.gene33741:CDS | 20.0% |
| !!! | AAAATGTTTTTCATTATGAC+AGG | + | 33330:11961-11980 | MS.gene33741:intron | 20.0% |
| !!! | AGTATAGTTTTTCTAAAAGA+AGG | - | 33330:11517-11536 | MS.gene33741:intergenic | 20.0% |
| !!! | CTGTTTAACTTTTCATAATT+AGG | + | 33330:12216-12235 | MS.gene33741:intron | 20.0% |
| !!! | GTATAGTTTTTCTAAAAGAA+GGG | - | 33330:11516-11535 | MS.gene33741:intergenic | 20.0% |
| !!! | TCTATTGGAATTTTTTACAT+TGG | - | 33330:12877-12896 | MS.gene33741:intergenic | 20.0% |
| ! | CAAAACATCATAAGACAATA+AGG | - | 33330:12776-12795 | MS.gene33741:intergenic | 25.0% |
| ! | GAAAAACTATACTGTTACAA+TGG | + | 33330:11524-11543 | MS.gene33741:intron | 25.0% |
| ! | GCTTAAAACTAAACTAAGTA+TGG | - | 33330:11879-11898 | MS.gene33741:intergenic | 25.0% |
| ! | GTTATAATAATTATGCAGGT+GGG | + | 33330:11906-11925 | MS.gene33741:intron | 25.0% |
| ! | TAGAGTTGTTCAACAAAATT+GGG | + | 33330:13098-13117 | MS.gene33741:CDS | 25.0% |
| ! | TGTTATAATAATTATGCAGG+TGG | + | 33330:11905-11924 | MS.gene33741:intron | 25.0% |
| !! | ATCACTCAAAACTATCTTTT+GGG | - | 33330:12439-12458 | MS.gene33741:intergenic | 25.0% |
| !! | ATTCAATTTTTGTATCAGTC+TGG | + | 33330:12375-12394 | MS.gene33741:intron | 25.0% |
| !! | ATTCTGGAAATATACGAAAA+TGG | - | 33330:11055-11074 | MS.gene33741:intergenic | 25.0% |
| !!! | GTCATTATTTTTTTTGCCAA+AGG | + | 33330:11930-11949 | MS.gene33741:intron | 25.0% |
| AACAAAATTGGGAAACAGAA+TGG | + | 33330:13109-13128 | MS.gene33741:CDS | 30.0% | |
| ATGCATAGTACTACAGAAAT+AGG | + | 33330:12943-12962 | MS.gene33741:intron | 30.0% | |
| CTATAACTCTTTGTGTGTTA+GGG | - | 33330:11141-11160 | MS.gene33741:intergenic | 30.0% | |
| GACATGTAATCATTGAAGAT+TGG | - | 33330:12338-12357 | MS.gene33741:intergenic | 30.0% | |
| GTAGAGTTGTTCAACAAAAT+TGG | + | 33330:13097-13116 | MS.gene33741:CDS | 30.0% | |
| GTTGTTCTGTTCTTTAATTC+TGG | - | 33330:11071-11090 | MS.gene33741:intergenic | 30.0% | |
| GTTGTTGAATGATACAGAAT+TGG | + | 33330:12636-12655 | MS.gene33741:intron | 30.0% | |
| TAACACACAAAGAGTTATAG+AGG | + | 33330:11141-11160 | MS.gene33741:CDS | 30.0% | |
| TATGCAACTTTGAATTGGTA+AGG | - | 33330:11692-11711 | MS.gene33741:intergenic | 30.0% | |
| TCTATAACTCTTTGTGTGTT+AGG | - | 33330:11142-11161 | MS.gene33741:intergenic | 30.0% | |
| TGTATCATGCTCAAGAAATA+AGG | + | 33330:11798-11817 | MS.gene33741:CDS | 30.0% | |
| TGTCATATGCAACTTTGAAT+TGG | - | 33330:11697-11716 | MS.gene33741:intergenic | 30.0% | |
| ! | CAATTTTACTTCATGTCAAC+AGG | + | 33330:11625-11644 | MS.gene33741:intron | 30.0% |
| ! | CATCACTCAAAACTATCTTT+TGG | - | 33330:12440-12459 | MS.gene33741:intergenic | 30.0% |
| ! | TCACTCAAAACTATCTTTTG+GGG | - | 33330:12438-12457 | MS.gene33741:intergenic | 30.0% |
| ! | TGATGTTTTGTCAGTACATA+TGG | + | 33330:12786-12805 | MS.gene33741:intron | 30.0% |
| ! | TTTTGTTGAACAACTCTACA+AGG | - | 33330:13096-13115 | MS.gene33741:intergenic | 30.0% |
| !! | AACATGAATTTTTCGAAGAG+GGG | + | 33330:11088-11107 | MS.gene33741:CDS | 30.0% |
| !! | ACAACATGAATTTTTCGAAG+AGG | + | 33330:11086-11105 | MS.gene33741:CDS | 30.0% |
| !! | CAACATGAATTTTTCGAAGA+GGG | + | 33330:11087-11106 | MS.gene33741:CDS | 30.0% |
| !! | CCTTTAACTTTTGGTATCAA+GGG | + | 33330:11743-11762 | MS.gene33741:CDS | 30.0% |
| !! | TTTCAGAAAGCATCAGATTA+AGG | - | 33330:11835-11854 | MS.gene33741:intergenic | 30.0% |
| !!! | AGTTTTTTGACAAACTCAGA+GGG | - | 33330:12510-12529 | MS.gene33741:intergenic | 30.0% |
| !!! | CAAAAGATAGTTTTGAGTGA+TGG | + | 33330:12438-12457 | MS.gene33741:CDS | 30.0% |
| AAAATTGGGAAACAGAATGG+AGG | + | 33330:13112-13131 | MS.gene33741:CDS | 35.0% | |
| ATACGCGATCTAAACACAAA+AGG | - | 33330:12312-12331 | MS.gene33741:intergenic | 35.0% | |
| ATACTTTCATCCTTTGACGT+TGG | + | 33330:12247-12266 | MS.gene33741:CDS | 35.0% | |
| CATATCACCAAGGAATCATA+TGG | + | 33330:11318-11337 | MS.gene33741:CDS | 35.0% | |
| CCCTTGATACCAAAAGTTAA+AGG | - | 33330:11746-11765 | MS.gene33741:intergenic | 35.0% | |
| CTCTTTAGATAATCCACCAT+TGG | - | 33330:11669-11688 | MS.gene33741:intergenic | 35.0% | |
| GAGAGAACATTTACAACCAA+AGG | + | 33330:11004-11023 | MS.gene33741:CDS | 35.0% | |
| GTGAAAACCATATGATTCCT+TGG | - | 33330:11328-11347 | MS.gene33741:intergenic | 35.0% | |
| TAGATCAACAAGTGCCTTAT+AGG | - | 33330:13218-13237 | MS.gene33741:intergenic | 35.0% | |
| TGGAAGTAATGTACATGAGA+AGG | + | 33330:10970-10989 | MS.gene33741:CDS | 35.0% | |
| ! | AGCTAGAAAGAAGTATGAGT+TGG | - | 33330:11443-11462 | MS.gene33741:intergenic | 35.0% |
| ! | ATAAGGCACTTGTTGATCTA+CGG | + | 33330:13218-13237 | MS.gene33741:CDS | 35.0% |
| ! | GCTAGAAAGAAGTATGAGTT+GGG | - | 33330:11442-11461 | MS.gene33741:intergenic | 35.0% |
| ! | GTTTTCTTGAACAAACTGGA+AGG | + | 33330:12721-12740 | MS.gene33741:CDS | 35.0% |
| ! | TATGGTTTTCACTCCTTTGT+TGG | + | 33330:11336-11355 | MS.gene33741:CDS | 35.0% |
| ! | TTTTGGTATCAAGGGAGTAA+AGG | + | 33330:11751-11770 | MS.gene33741:CDS | 35.0% |
| !! | AACATTTTCAGCTTAGCCTT+TGG | - | 33330:11949-11968 | MS.gene33741:intergenic | 35.0% |
| !! | ATGTCGGCTTAACTTTGTTT+AGG | - | 33330:12833-12852 | MS.gene33741:intergenic | 35.0% |
| !! | GCCTTTAACTTTTGGTATCA+AGG | + | 33330:11742-11761 | MS.gene33741:CDS | 35.0% |
| !! | TGATACAGAATTGGTGTTGA+TGG | + | 33330:12645-12664 | MS.gene33741:intron | 35.0% |
| !!! | CAGTTTTTTGACAAACTCAG+AGG | - | 33330:12511-12530 | MS.gene33741:intergenic | 35.0% |
| AATACAGGATGCACTAGCAA+AGG | + | 33330:11414-11433 | MS.gene33741:CDS | 40.0% | |
| ACACATGTTGAAGCCAACAA+AGG | - | 33330:11352-11371 | MS.gene33741:intergenic | 40.0% | |
| ACGAAAATGGTCCATCTACA+TGG | - | 33330:11042-11061 | MS.gene33741:intergenic | 40.0% | |
| AGCAACAGACCTGAATTCAA+GGG | - | 33330:11380-11399 | MS.gene33741:intergenic | 40.0% | |
| ATGTTGTGTGCATATCACCA+AGG | + | 33330:11308-11327 | MS.gene33741:CDS | 40.0% | |
| CATTCATGTCACACTCATTG+AGG | + | 33330:12122-12141 | MS.gene33741:CDS | 40.0% | |
| CATTGTGTAGTTATTGGAGG+TGG | + | 33330:12015-12034 | MS.gene33741:CDS | 40.0% | |
| CGAAAATGGTCCATCTACAT+GGG | - | 33330:11041-11060 | MS.gene33741:intergenic | 40.0% | |
| CTGCATTGTGTAGTTATTGG+AGG | + | 33330:12012-12031 | MS.gene33741:CDS | 40.0% | |
| CTGCTGCATTGTGTAGTTAT+TGG | + | 33330:12009-12028 | MS.gene33741:CDS | 40.0% | |
| GAGTATACTTTCCTATGCAC+TGG | + | 33330:13037-13056 | MS.gene33741:intron | 40.0% | |
| GATGGAACTGAAGTTCCTTA+TGG | + | 33330:12456-12475 | MS.gene33741:CDS | 40.0% | |
| GTATAAACATATGGGGAGCA+TGG | + | 33330:13180-13199 | MS.gene33741:CDS | 40.0% | |
| TCTAGTCCTGCATATCTTGT+CGG | - | 33330:11193-11212 | MS.gene33741:intergenic | 40.0% | |
| TGAAGTTCCTTATGGTCTCT+TGG | + | 33330:12464-12483 | MS.gene33741:CDS | 40.0% | |
| TGGAAGATGTCTTTGCACTT+GGG | + | 33330:12688-12707 | MS.gene33741:CDS | 40.0% | |
| TTCCTTATGGTCTCTTGGTT+TGG | + | 33330:12469-12488 | MS.gene33741:CDS | 40.0% | |
| ! | AGTCTGGAGTTTGTCTTATG+CGG | + | 33330:12391-12410 | MS.gene33741:intron | 40.0% |
| ! | ATGCTTTCTGAAAATCCAGG+TGG | + | 33330:11842-11861 | MS.gene33741:intron | 40.0% |
| ! | CTGATGCTTTCTGAAAATCC+AGG | + | 33330:11839-11858 | MS.gene33741:CDS | 40.0% |
| ! | TGCAACGAAGCACTTAACAA+AGG | + | 33330:12282-12301 | MS.gene33741:CDS | 40.0% |
| ! | TGCTTTCTGAAAATCCAGGT+GGG | + | 33330:11843-11862 | MS.gene33741:intron | 40.0% |
| ! | TTTTCGAAGAGGGGAATAAC+AGG | + | 33330:11097-11116 | MS.gene33741:CDS | 40.0% |
| !! | ACAGAATTGGTGTTGATGGA+TGG | + | 33330:12649-12668 | MS.gene33741:intron | 40.0% |
| !! | CTGCTTGTCGGTTTCTTAAA+GGG | + | 33330:11266-11285 | MS.gene33741:CDS | 40.0% |
| !! | TTGTTGGCTTCAACATGTGT+TGG | + | 33330:11352-11371 | MS.gene33741:CDS | 40.0% |
| !!! | AGAAGATCAGGTGTTGCTTT+TGG | + | 33330:10950-10969 | MS.gene33741:CDS | 40.0% |
| !!! | GCTGGTTTTCTTGAACAAAC+TGG | + | 33330:12717-12736 | MS.gene33741:CDS | 40.0% |
| AAGCAACACCTGATCTTCTC+AGG | - | 33330:10949-10968 | MS.gene33741:intergenic | 45.0% | |
| AAGCCTAGAGTGGTTGTTCT+CGG | + | 33330:11232-11251 | MS.gene33741:CDS | 45.0% | |
| AATGGTCCATCTACATGGGA+AGG | - | 33330:11037-11056 | MS.gene33741:intergenic | 45.0% | |
| AGAAGCAACCTGAGAAGATC+AGG | + | 33330:10938-10957 | MS.gene33741:CDS | 45.0% | |
| ATGGATATGAAACACCCACC+TGG | - | 33330:11860-11879 | MS.gene33741:intergenic | 45.0% | |
| CAGCAACAGACCTGAATTCA+AGG | - | 33330:11381-11400 | MS.gene33741:intergenic | 45.0% | |
| CCACTAAATTCCACTCCTGT+AGG | - | 33330:12042-12061 | MS.gene33741:intergenic | 45.0% | |
| CCTACAGGAGTGGAATTTAG+TGG | + | 33330:12039-12058 | MS.gene33741:CDS | 45.0% | |
| GACAAGATATGCAGGACTAG+AGG | + | 33330:11192-11211 | MS.gene33741:CDS | 45.0% | |
| GACAAGCTTGTAATTGCAGC+TGG | + | 33330:11713-11732 | MS.gene33741:CDS | 45.0% | |
| GACCAAACCAAGAGACCATA+AGG | - | 33330:12474-12493 | MS.gene33741:intergenic | 45.0% | |
| GATGATCCGACAAGATATGC+AGG | + | 33330:11184-11203 | MS.gene33741:CDS | 45.0% | |
| GCAAAGACATCTTCCACAGA+CGG | - | 33330:12684-12703 | MS.gene33741:intergenic | 45.0% | |
| GCATCCTGTATTCTACCAAC+AGG | - | 33330:11406-11425 | MS.gene33741:intergenic | 45.0% | |
| GGAAGATGTCTTTGCACTTG+GGG | + | 33330:12689-12708 | MS.gene33741:CDS | 45.0% | |
| GTGGAAGATGTCTTTGCACT+TGG | + | 33330:12687-12706 | MS.gene33741:CDS | 45.0% | |
| TCCATCTACATGGGAAGGTA+AGG | - | 33330:11032-11051 | MS.gene33741:intergenic | 45.0% | |
| TCCTTACCTTCCCATGTAGA+TGG | + | 33330:11028-11047 | MS.gene33741:CDS | 45.0% | |
| TGACAGGTTGCTGAAAGACA+AGG | + | 33330:13064-13083 | MS.gene33741:intron | 45.0% | |
| TGGGAAACAGAATGGAGGAA+AGG | + | 33330:13117-13136 | MS.gene33741:CDS | 45.0% | |
| TTTGTGTGTTAGGGAGCTGA+TGG | - | 33330:11132-11151 | MS.gene33741:intergenic | 45.0% | |
| ! | GTCTGGAGTTTGTCTTATGC+GGG | + | 33330:12392-12411 | MS.gene33741:intron | 45.0% |
| ! | GTGTTGGTACCCTTGAATTC+AGG | + | 33330:11368-11387 | MS.gene33741:CDS | 45.0% |
| ! | TCTGGAGTTTGTCTTATGCG+GGG | + | 33330:12393-12412 | MS.gene33741:CDS | 45.0% |
| ! | TGAGCCTGTTGGTAGAATAC+AGG | + | 33330:11399-11418 | MS.gene33741:CDS | 45.0% |
| !! | GCTGCTTGTCGGTTTCTTAA+AGG | + | 33330:11265-11284 | MS.gene33741:CDS | 45.0% |
| !! | GGAGCTGAGCCTTTAACTTT+TGG | + | 33330:11734-11753 | MS.gene33741:CDS | 45.0% |
| !! | TCCAATAGAGGGTACTTGAC+AGG | + | 33330:12888-12907 | MS.gene33741:intron | 45.0% |
| !! | TTCTTTCTAGCTTCCTGCAC+TGG | + | 33330:11451-11470 | MS.gene33741:CDS | 45.0% |
| AATCTTCCAAGCTCTCCAGG+TGG | + | 33330:12531-12550 | MS.gene33741:CDS | 50.0% | |
| ACCAGGTGAAAAGCCTAGAG+TGG | + | 33330:11222-11241 | MS.gene33741:CDS | 50.0% | |
| AGAGTGGTTGTTCTCGGTAC+CGG | + | 33330:11238-11257 | MS.gene33741:CDS | 50.0% | |
| AGGCTAACCTGAGCTAAAGC+TGG | - | 33330:12756-12775 | MS.gene33741:intergenic | 50.0% | |
| AGTTTGTCTTATGCGGGGTG+TGG | + | 33330:12398-12417 | MS.gene33741:CDS | 50.0% | |
| ATGGGAAGGTAAGGAGCCTT+TGG | - | 33330:11023-11042 | MS.gene33741:intergenic | 50.0% | |
| ATGTCAACAGGTCTACTGCG+AGG | + | 33330:11637-11656 | MS.gene33741:intron | 50.0% | |
| CTGAATCTTCCAAGCTCTCC+AGG | + | 33330:12528-12547 | MS.gene33741:CDS | 50.0% | |
| GCCTGTCAAGTACCCTCTAT+TGG | - | 33330:12892-12911 | MS.gene33741:intergenic | 50.0% | |
| GCTTCGTTGCATACTGTCGA+AGG | - | 33330:12273-12292 | MS.gene33741:intergenic | 50.0% | |
| GGACTAGAGGCAACAAAACC+AGG | + | 33330:11205-11224 | MS.gene33741:CDS | 50.0% | |
| GGCATCAGTAGGTGCCTATA+AGG | + | 33330:13201-13220 | MS.gene33741:CDS | 50.0% | |
| GTACCGAGAACAACCACTCT+AGG | - | 33330:11238-11257 | MS.gene33741:intergenic | 50.0% | |
| GTTATTGGAGGTGGTCCTAC+AGG | + | 33330:12024-12043 | MS.gene33741:CDS | 50.0% | |
| GTTTGTGTCAACTCCAGTGC+AGG | - | 33330:11467-11486 | MS.gene33741:intergenic | 50.0% | |
| TACTGCGAGGCAGTTACCAA+TGG | + | 33330:11650-11669 | MS.gene33741:CDS | 50.0% | |
| TCTGCAGATGGCATCACACT+TGG | + | 33330:13145-13164 | MS.gene33741:CDS | 50.0% | |
| TTTGCACTTGGGGATTGTGC+TGG | + | 33330:12699-12718 | MS.gene33741:CDS | 50.0% | |
| ! | ACCACTCTAGGCTTTTCACC+TGG | - | 33330:11226-11245 | MS.gene33741:intergenic | 50.0% |
| ! | AGTGCTTCCAGCTTTAGCTC+AGG | + | 33330:12746-12765 | MS.gene33741:CDS | 50.0% |
| ! | GGAAAGGCTTTGTCTGCAGA+TGG | + | 33330:13133-13152 | MS.gene33741:CDS | 50.0% |
| ! | TGAGCTAAAGCTGGAAGCAC+TGG | - | 33330:12747-12766 | MS.gene33741:intergenic | 50.0% |
| !! | TTGGTTTGGTCCACAGGAGT+TGG | + | 33330:12483-12502 | MS.gene33741:CDS | 50.0% |
| AAACCGACAAGCAGCCCAAC+CGG | - | 33330:11260-11279 | MS.gene33741:intergenic | 55.0% | |
| AGGTCTGTTGCTGAGCCTGT+TGG | + | 33330:11388-11407 | MS.gene33741:CDS | 55.0% | |
| ATGGATGCGTGTTCCGTCTG+TGG | + | 33330:12668-12687 | MS.gene33741:CDS | 55.0% | |
| CCTGTCAGTGACCAGTGCAT+AGG | - | 33330:13051-13070 | MS.gene33741:intergenic | 55.0% | |
| CTGTCGAAGGCCAACGTCAA+AGG | - | 33330:12260-12279 | MS.gene33741:intergenic | 55.0% | |
| GGCTTCACATACCTTCCACC+TGG | - | 33330:12549-12568 | MS.gene33741:intergenic | 55.0% | |
| TACCTTCCACCTGGAGAGCT+TGG | - | 33330:12540-12559 | MS.gene33741:intergenic | 55.0% | |
| TCTTATGCGGGGTGTGGTGA+AGG | + | 33330:12404-12423 | MS.gene33741:CDS | 55.0% | |
| TGCGAGGCAGTTACCAATGG+TGG | + | 33330:11653-11672 | MS.gene33741:CDS | 55.0% | |
| TTCCAAGCTCTCCAGGTGGA+AGG | + | 33330:12535-12554 | MS.gene33741:CDS | 55.0% | |
| ! | ATGGGGAGCATGGCATCAGT+AGG | + | 33330:13190-13209 | MS.gene33741:CDS | 55.0% |
| ! | CCTATGCACTGGTCACTGAC+AGG | + | 33330:13048-13067 | MS.gene33741:intron | 55.0% |
| !! | GGTCTCTTGGTTTGGTCCAC+AGG | + | 33330:12477-12496 | MS.gene33741:CDS | 55.0% |
| !! | GGTTGTTCTCGGTACCGGTT+GGG | + | 33330:11243-11262 | MS.gene33741:CDS | 55.0% |
| !! | TGGTTGTTCTCGGTACCGGT+TGG | + | 33330:11242-11261 | MS.gene33741:CDS | 55.0% |
| CTCAGAGGGACCAACTCCTG+TGG | - | 33330:12496-12515 | MS.gene33741:intergenic | 60.0% | |
| TATGCGGGGTGTGGTGAAGG+AGG | + | 33330:12407-12426 | MS.gene33741:CDS | 60.0% | |
| TGGAGGTGGTCCTACAGGAG+TGG | + | 33330:12029-12048 | MS.gene33741:CDS | 60.0% | |
| !! | GTACCGGTTGGGCTGCTTGT+CGG | + | 33330:11254-11273 | MS.gene33741:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 33330 | gene | 10917 | 13249 | 10917 | ID=MS.gene33741 |
| 33330 | mRNA | 10917 | 13249 | 10917 | ID=MS.gene33741.t1;Parent=MS.gene33741 |
| 33330 | exon | 10917 | 11495 | 10917 | ID=MS.gene33741.t1.exon1;Parent=MS.gene33741.t1 |
| 33330 | CDS | 10917 | 11495 | 10917 | ID=cds.MS.gene33741.t1;Parent=MS.gene33741.t1 |
| 33330 | exon | 11647 | 11860 | 11647 | ID=MS.gene33741.t1.exon2;Parent=MS.gene33741.t1 |
| 33330 | CDS | 11647 | 11860 | 11647 | ID=cds.MS.gene33741.t1;Parent=MS.gene33741.t1 |
| 33330 | exon | 11983 | 12143 | 11983 | ID=MS.gene33741.t1.exon3;Parent=MS.gene33741.t1 |
| 33330 | CDS | 11983 | 12143 | 11983 | ID=cds.MS.gene33741.t1;Parent=MS.gene33741.t1 |
| 33330 | exon | 12238 | 12303 | 12238 | ID=MS.gene33741.t1.exon4;Parent=MS.gene33741.t1 |
| 33330 | CDS | 12238 | 12303 | 12238 | ID=cds.MS.gene33741.t1;Parent=MS.gene33741.t1 |
| 33330 | exon | 12393 | 12556 | 12393 | ID=MS.gene33741.t1.exon5;Parent=MS.gene33741.t1 |
| 33330 | CDS | 12393 | 12556 | 12393 | ID=cds.MS.gene33741.t1;Parent=MS.gene33741.t1 |
| 33330 | exon | 12653 | 12767 | 12653 | ID=MS.gene33741.t1.exon6;Parent=MS.gene33741.t1 |
| 33330 | CDS | 12653 | 12767 | 12653 | ID=cds.MS.gene33741.t1;Parent=MS.gene33741.t1 |
| 33330 | exon | 13070 | 13249 | 13070 | ID=MS.gene33741.t1.exon7;Parent=MS.gene33741.t1 |
| 33330 | CDS | 13070 | 13249 | 13070 | ID=cds.MS.gene33741.t1;Parent=MS.gene33741.t1 |
| Gene Sequence |
| Protein sequence |
