Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34228.t1 | XP_003628534.1 | 99.2 | 354 | 3 | 0 | 1 | 354 | 22 | 375 | 1.80E-197 | 698.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34228.t1 | Q8RWJ7 | 66.6 | 293 | 78 | 6 | 1 | 273 | 22 | 314 | 7.0e-102 | 372.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34228.t1 | G7LDQ2 | 99.2 | 354 | 3 | 0 | 1 | 354 | 22 | 375 | 1.3e-197 | 698.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050750 | MS.gene34228 | -0.802803 | 4.72E-49 | -1.69E-46 |
MS.gene050826 | MS.gene34228 | -0.813667 | 2.28E-51 | -1.69E-46 |
MS.gene050953 | MS.gene34228 | -0.819786 | 9.67E-53 | -1.69E-46 |
MS.gene052673 | MS.gene34228 | 0.811675 | 6.22E-51 | -1.69E-46 |
MS.gene052674 | MS.gene34228 | -0.801075 | 1.07E-48 | -1.69E-46 |
MS.gene052675 | MS.gene34228 | -0.803973 | 2.70E-49 | -1.69E-46 |
MS.gene052677 | MS.gene34228 | -0.806345 | 8.61E-50 | -1.69E-46 |
MS.gene054291 | MS.gene34228 | 0.800833 | 1.20E-48 | -1.69E-46 |
MS.gene054405 | MS.gene34228 | -0.810406 | 1.17E-50 | -1.69E-46 |
MS.gene055926 | MS.gene34228 | -0.804594 | 2.00E-49 | -1.69E-46 |
MS.gene061114 | MS.gene34228 | 0.801959 | 7.04E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34228.t1 | MTR_8g061040 | 99.153 | 354 | 3 | 0 | 1 | 354 | 22 | 375 | 0.0 | 734 |
MS.gene34228.t1 | MTR_3g110260 | 40.833 | 240 | 111 | 3 | 1 | 239 | 23 | 232 | 2.03e-62 | 199 |
MS.gene34228.t1 | MTR_8g014075 | 40.991 | 222 | 120 | 3 | 16 | 237 | 37 | 247 | 7.59e-47 | 160 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34228.t1 | AT3G18380 | 66.553 | 293 | 78 | 6 | 1 | 273 | 22 | 314 | 1.58e-136 | 392 |
MS.gene34228.t1 | AT3G18380 | 66.327 | 294 | 78 | 7 | 1 | 273 | 22 | 315 | 1.05e-134 | 388 |
MS.gene34228.t1 | AT3G18380 | 66.323 | 291 | 80 | 7 | 1 | 273 | 22 | 312 | 3.69e-134 | 386 |
MS.gene34228.t1 | AT1G15215 | 44.167 | 240 | 128 | 3 | 1 | 238 | 22 | 257 | 6.62e-61 | 196 |
MS.gene34228.t1 | AT1G15215 | 43.172 | 227 | 123 | 3 | 1 | 225 | 22 | 244 | 3.48e-54 | 179 |
MS.gene34228.t1 | AT1G15215 | 43.172 | 227 | 123 | 3 | 1 | 225 | 22 | 244 | 6.16e-54 | 178 |
MS.gene34228.t1 | AT1G15215 | 35.135 | 148 | 87 | 4 | 1 | 146 | 22 | 162 | 3.23e-16 | 75.9 |
Find 77 sgRNAs with CRISPR-Local
Find 401 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGTTGAGTCATTATCCTTCC+TGG | 0.211207 | 8.4:+47641581 | None:intergenic |
TGTAATCTGTAATCAGTTTC+AGG | 0.218700 | 8.4:+47636731 | None:intergenic |
GAAACATTTGTTTGCAAAAC+AGG | 0.257239 | 8.4:+47636560 | None:intergenic |
AAAATAAGCGATATGCTATA+AGG | 0.259455 | 8.4:-47641667 | MS.gene34228:CDS |
GTTCCTGCTCCTTCAGCTTC+AGG | 0.261491 | 8.4:-47641545 | MS.gene34228:intron |
AAGCACTTGCAGACAAGTTT+AGG | 0.288349 | 8.4:-47641927 | MS.gene34228:intron |
GGCGTGATATTTAACTTTGC+AGG | 0.330713 | 8.4:+47641626 | None:intergenic |
CTTTCTATCATACAGACATT+TGG | 0.352765 | 8.4:-47638794 | MS.gene34228:CDS |
ATGGAATTTGAAGCTAAATC+TGG | 0.358674 | 8.4:-47638939 | MS.gene34228:CDS |
CTCGCACCATGAACATTTGC+TGG | 0.369463 | 8.4:+47636647 | None:intergenic |
TTTCATTGCAGGTATGGAAT+TGG | 0.369862 | 8.4:-47641694 | MS.gene34228:intron |
GTTGAGTCATTATCCTTCCT+GGG | 0.392666 | 8.4:+47641582 | None:intergenic |
CCAGTGAATGCGGCGGTGCT+TGG | 0.419350 | 8.4:+47636458 | None:intergenic |
GGATCCACATTCATACTTTG+TGG | 0.428698 | 8.4:+47636530 | None:intergenic |
AAATAAGCGATATGCTATAA+GGG | 0.442347 | 8.4:-47641666 | MS.gene34228:CDS |
CCAAGCACCGCCGCATTCAC+TGG | 0.450582 | 8.4:-47636458 | MS.gene34228:CDS |
GGTTACTAATCCTTCTGAAA+TGG | 0.459416 | 8.4:-47636624 | MS.gene34228:CDS |
TGTAATCTTGCCTTTACGAT+CGG | 0.459596 | 8.4:+47641795 | None:intergenic |
CGCAATCTTCTGCTGATCCG+TGG | 0.463686 | 8.4:+47636679 | None:intergenic |
GAAGCTGAAGGAGCAGGAAC+AGG | 0.470238 | 8.4:+47641548 | None:intergenic |
GTAATCTTGCCTTTACGATC+GGG | 0.473723 | 8.4:+47641796 | None:intergenic |
GTCTTTGAGCATCAAGGACA+TGG | 0.475882 | 8.4:+47637980 | None:intergenic |
ATATTCAAGTTACTTCCCTT+CGG | 0.477909 | 8.4:+47636388 | None:intergenic |
GACATGGGCATCAAAGTAAA+GGG | 0.481099 | 8.4:+47637996 | None:intergenic |
CAAATGTCTGTATGATAGAA+AGG | 0.481293 | 8.4:+47638795 | None:intergenic |
GTCAAATCAGTCCGAGGCAT+GGG | 0.481986 | 8.4:+47641605 | None:intergenic |
GATCATCCAGCAAATGTTCA+TGG | 0.483799 | 8.4:-47636653 | MS.gene34228:CDS |
GATTACAGTACAGATGAAAC+AGG | 0.498566 | 8.4:-47641779 | MS.gene34228:intron |
GGACATGGGCATCAAAGTAA+AGG | 0.499318 | 8.4:+47637995 | None:intergenic |
GCCAGGAAATCGTGCCGCTT+AGG | 0.503677 | 8.4:-47636769 | MS.gene34228:intron |
ACAAAAGCTGATGTTCAAGC+TGG | 0.509935 | 8.4:-47636494 | MS.gene34228:CDS |
CTACCTGAAGCTGAAGGAGC+AGG | 0.516322 | 8.4:+47641542 | None:intergenic |
GAAGCTAAATCTGGAAGAGA+TGG | 0.517358 | 8.4:-47638930 | MS.gene34228:CDS |
CCTCGGACTGATTTGACCCC+AGG | 0.520581 | 8.4:-47641599 | MS.gene34228:CDS |
CAAGTTACTTCCCTTCGGCC+AGG | 0.523928 | 8.4:+47636393 | None:intergenic |
ACATTTGGAGAGCAGTGATC+CGG | 0.538548 | 8.4:-47638779 | MS.gene34228:intron |
AGACGGAGGCATGATGTAAG+AGG | 0.539794 | 8.4:-47637961 | MS.gene34228:CDS |
TAAATATCACGCCCATGCCT+CGG | 0.541650 | 8.4:-47641616 | MS.gene34228:CDS |
AAACAAAGTATGAGATCACC+AGG | 0.544394 | 8.4:+47638160 | None:intergenic |
TGCCGCTTAGGAAGATTTGT+CGG | 0.552355 | 8.4:-47636757 | MS.gene34228:CDS |
GCAATCTTCTGCTGATCCGT+GGG | 0.554224 | 8.4:+47636680 | None:intergenic |
AGTGAATCACCCGATCGTAA+AGG | 0.556434 | 8.4:-47641805 | MS.gene34228:CDS |
GGCTCCTGAAAATTCAGTTA+TGG | 0.559539 | 8.4:-47638958 | MS.gene34228:CDS |
GCTTGAAGAACATCTCGTGC+TGG | 0.567998 | 8.4:+47641946 | None:intergenic |
CAGCAAATGTTCATGGTGCG+AGG | 0.569607 | 8.4:-47636646 | MS.gene34228:CDS |
GGTCAAATCAGTCCGAGGCA+TGG | 0.569910 | 8.4:+47641604 | None:intergenic |
GAATGTGTCGCAGTGCTCCC+TGG | 0.583022 | 8.4:-47638178 | MS.gene34228:CDS |
ATTAATCCACTCATCTTCCT+CGG | 0.585484 | 8.4:+47638246 | None:intergenic |
CTACTCAAAACCTGGCCGAA+GGG | 0.589785 | 8.4:-47636403 | MS.gene34228:CDS |
TCTACTCAAAACCTGGCCGA+AGG | 0.590738 | 8.4:-47636404 | MS.gene34228:CDS |
GCCTCCGTCTTTGAGCATCA+AGG | 0.590882 | 8.4:+47637974 | None:intergenic |
TTGAGTCATTATCCTTCCTG+GGG | 0.591497 | 8.4:+47641583 | None:intergenic |
GCAGGAACAGGAGAAGCTGT+TGG | 0.594628 | 8.4:+47641560 | None:intergenic |
GACTTCAGGAACACTGCTAG+TGG | 0.595794 | 8.4:+47636427 | None:intergenic |
TGAAGTCTCTACTCAAAACC+TGG | 0.601287 | 8.4:-47636411 | MS.gene34228:CDS |
GGCAATGATTCCAGTGAATG+CGG | 0.603755 | 8.4:+47636448 | None:intergenic |
CACAGTTCAAACAACAGCAA+AGG | 0.607569 | 8.4:-47638982 | MS.gene34228:intron |
GATTCACATGGCAGAGAGCG+CGG | 0.607948 | 8.4:+47638205 | None:intergenic |
ATGTCCTTGATGCTCAAAGA+CGG | 0.608783 | 8.4:-47637978 | MS.gene34228:CDS |
AGCAAATGTTCATGGTGCGA+GGG | 0.609406 | 8.4:-47636645 | MS.gene34228:CDS |
GGATCAGCAGAAGATTGCGT+TGG | 0.610789 | 8.4:-47636675 | MS.gene34228:CDS |
AACATTCTACCTGAAGCTGA+AGG | 0.613833 | 8.4:+47641536 | None:intergenic |
TCCACATTCATACTTTGTGG+TGG | 0.615610 | 8.4:+47636533 | None:intergenic |
TTGGATCCGAGGAAGATGAG+TGG | 0.615863 | 8.4:-47638252 | MS.gene34228:CDS |
ACCACCACAAAGTATGAATG+TGG | 0.618600 | 8.4:-47636534 | MS.gene34228:CDS |
AGTTCAAACAACAGCAAAGG+CGG | 0.631634 | 8.4:-47638979 | MS.gene34228:CDS |
TGTGAATGATGCAGCACCCA+CGG | 0.641428 | 8.4:-47636696 | MS.gene34228:CDS |
CTATGATCACGATCAATCTG+AGG | 0.641893 | 8.4:-47637914 | MS.gene34228:intron |
AATCTGGAAGAGATGGAGCA+TGG | 0.658527 | 8.4:-47638923 | MS.gene34228:intron |
CTCCGACAAATCTTCCTAAG+CGG | 0.665093 | 8.4:+47636755 | None:intergenic |
CCTGGGGTCAAATCAGTCCG+AGG | 0.675720 | 8.4:+47641599 | None:intergenic |
TCCTTGATGCTCAAAGACGG+AGG | 0.675814 | 8.4:-47637975 | MS.gene34228:CDS |
GGACTGATTTGACCCCAGGA+AGG | 0.679224 | 8.4:-47641595 | MS.gene34228:CDS |
ACACATTCTGATGATTCACA+TGG | 0.682055 | 8.4:+47638193 | None:intergenic |
TCTTTGAGCATCAAGGACAT+GGG | 0.687814 | 8.4:+47637981 | None:intergenic |
AATGATTCCAGTGAATGCGG+CGG | 0.736741 | 8.4:+47636451 | None:intergenic |
AACAAAGTATGAGATCACCA+GGG | 0.773298 | 8.4:+47638161 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAGAAAAATATAGTTTAA+GGG | - | chr8.4:47638774-47638793 | MS.gene34228:intron | 10.0% |
!! | CAAAAGAAAATTAAAAAAAA+AGG | - | chr8.4:47639001-47639020 | MS.gene34228:intron | 10.0% |
!! | TAAAAGAAAAATATAGTTTA+AGG | - | chr8.4:47638773-47638792 | MS.gene34228:intron | 10.0% |
!! | TTTATAAAAAGTTACTATTT+AGG | + | chr8.4:47638837-47638856 | None:intergenic | 10.0% |
!!! | ATATAATTTACATTTTTGAA+TGG | + | chr8.4:47640886-47640905 | None:intergenic | 10.0% |
!!! | TTGTTTATAATTTTAACTTA+TGG | - | chr8.4:47637086-47637105 | MS.gene34228:intron | 10.0% |
!! | AAAAAAAAAGGAGATAAATT+GGG | - | chr8.4:47639013-47639032 | MS.gene34228:intron | 15.0% |
!! | AAAAAATAAAAAATTACACC+AGG | + | chr8.4:47641182-47641201 | None:intergenic | 15.0% |
!! | AAAACTTAACAAAATAAGAT+AGG | + | chr8.4:47640035-47640054 | None:intergenic | 15.0% |
!! | AAACTTAACAAAATAAGATA+GGG | + | chr8.4:47640034-47640053 | None:intergenic | 15.0% |
!! | AAAGATCAAAATTCAATAAA+TGG | + | chr8.4:47640337-47640356 | None:intergenic | 15.0% |
!! | ATAAAAGATATAAATACAAG+AGG | + | chr8.4:47640513-47640532 | None:intergenic | 15.0% |
!! | ATATCCAAAAATTAAAACTA+TGG | + | chr8.4:47640613-47640632 | None:intergenic | 15.0% |
!! | TAAAAAAAAAGGAGATAAAT+TGG | - | chr8.4:47639012-47639031 | MS.gene34228:intron | 15.0% |
!! | TAACCTAAAAATAATTAAAG+AGG | + | chr8.4:47639491-47639510 | None:intergenic | 15.0% |
!! | TAGATTAAAAATATGAAAGT+TGG | - | chr8.4:47641062-47641081 | MS.gene34228:intron | 15.0% |
!! | TATAGATGAAAAATAAAGAT+TGG | + | chr8.4:47640840-47640859 | None:intergenic | 15.0% |
!! | TATCCAAAAATTAAAACTAT+GGG | + | chr8.4:47640612-47640631 | None:intergenic | 15.0% |
!!! | AATACTTCTTTTAAACAAAT+TGG | + | chr8.4:47639850-47639869 | None:intergenic | 15.0% |
!!! | ATAATAAGTTAATTTGATCA+TGG | - | chr8.4:47640259-47640278 | MS.gene34228:intron | 15.0% |
!!! | ATGATAATGAAAAATAAAAG+TGG | + | chr8.4:47637180-47637199 | None:intergenic | 15.0% |
!!! | ATGTCATTTATTTATTCTTT+TGG | + | chr8.4:47641130-47641149 | None:intergenic | 15.0% |
!!! | ATTGTTATATTTTGTTACTA+AGG | - | chr8.4:47636627-47636646 | MS.gene34228:CDS | 15.0% |
!!! | GTAAACATTTTTAAAGATAA+AGG | - | chr8.4:47641094-47641113 | MS.gene34228:intron | 15.0% |
!!! | TCTTAATTAATTTTCATTAG+TGG | - | chr8.4:47639519-47639538 | MS.gene34228:intron | 15.0% |
!!! | TCTTATTTTGTTAAGTTTTA+TGG | - | chr8.4:47640036-47640055 | MS.gene34228:intron | 15.0% |
!!! | TCTTTTTTAGTTTTTATCTT+AGG | - | chr8.4:47640938-47640957 | MS.gene34228:intron | 15.0% |
!!! | TTAAAAGAAGTATTATGTAA+TGG | - | chr8.4:47639856-47639875 | MS.gene34228:intron | 15.0% |
!!! | TTATTTTTTCATTTGAGTTT+TGG | - | chr8.4:47641200-47641219 | MS.gene34228:intron | 15.0% |
!!! | TTTCCTCTTTAATTATTTTT+AGG | - | chr8.4:47639485-47639504 | MS.gene34228:intron | 15.0% |
!!! | TTTTTGTTTGTAAAAAAGTA+TGG | - | chr8.4:47639175-47639194 | MS.gene34228:intron | 15.0% |
!!! | TTTTTTTCATTTATTTGGAT+TGG | - | chr8.4:47640644-47640663 | MS.gene34228:intron | 15.0% |
!! | AAAGGCAATAATTAAACTAT+GGG | + | chr8.4:47638967-47638986 | None:intergenic | 20.0% |
!! | AATATTTAGGTCATATTTAC+AGG | - | chr8.4:47637652-47637671 | MS.gene34228:intron | 20.0% |
!! | AATCACAATTAGTATAATGT+GGG | + | chr8.4:47639052-47639071 | None:intergenic | 20.0% |
!! | ACAATCTAATGTTAAATTAC+CGG | + | chr8.4:47639622-47639641 | None:intergenic | 20.0% |
!! | AGATTAAATTGTATCTGAAT+AGG | + | chr8.4:47641278-47641297 | None:intergenic | 20.0% |
!! | ATCCAAAAATTAAAACTATG+GGG | + | chr8.4:47640611-47640630 | None:intergenic | 20.0% |
!! | GATTCACTAAAACAAAAAAA+TGG | + | chr8.4:47636562-47636581 | None:intergenic | 20.0% |
!!! | AAGTTTTGTGATTTTATTTG+AGG | + | chr8.4:47637933-47637952 | None:intergenic | 20.0% |
!!! | ATTTTGATCTTTGACATTAA+AGG | - | chr8.4:47640345-47640364 | MS.gene34228:intron | 20.0% |
!!! | CAAATTTAATTCCACATTTT+AGG | + | chr8.4:47636534-47636553 | None:intergenic | 20.0% |
!!! | GCATTAAAATTTGAAACATT+TGG | + | chr8.4:47641514-47641533 | None:intergenic | 20.0% |
!!! | TATATCTTATTTTTTATGGC+TGG | + | chr8.4:47638646-47638665 | None:intergenic | 20.0% |
!!! | TGGTAAGAAACAATAATTTT+AGG | + | chr8.4:47640317-47640336 | None:intergenic | 20.0% |
!!! | TTGTCTTCAATTATTTTTGT+GGG | - | chr8.4:47639976-47639995 | MS.gene34228:intron | 20.0% |
!!! | TTTCAAATTTTAATGCAAAG+AGG | - | chr8.4:47641518-47641537 | MS.gene34228:intron | 20.0% |
!!! | TTTGTCTTCAATTATTTTTG+TGG | - | chr8.4:47639975-47639994 | MS.gene34228:intron | 20.0% |
! | AAAAAGATATTGCCATTACA+TGG | + | chr8.4:47640071-47640090 | None:intergenic | 25.0% |
! | AAAATAAGCGATATGCTATA+AGG | - | chr8.4:47636712-47636731 | MS.gene34228:CDS | 25.0% |
! | AAATAAGCGATATGCTATAA+GGG | - | chr8.4:47636713-47636732 | MS.gene34228:CDS | 25.0% |
! | AAATGGGATAATATCATTGA+AGG | - | chr8.4:47637231-47637250 | MS.gene34228:intron | 25.0% |
! | AACCTAAATGATTTATGACT+AGG | - | chr8.4:47641414-47641433 | MS.gene34228:intron | 25.0% |
! | AACCTAATTTCATAAGTGAA+AGG | + | chr8.4:47639150-47639169 | None:intergenic | 25.0% |
! | AATCACAAAACTTACTTGAA+AGG | - | chr8.4:47637940-47637959 | MS.gene34228:CDS | 25.0% |
! | ACCTAATTTCATAAGTGAAA+GGG | + | chr8.4:47639149-47639168 | None:intergenic | 25.0% |
! | AGCATAGATTCAAAACAATA+TGG | - | chr8.4:47637385-47637404 | MS.gene34228:intron | 25.0% |
! | ATAATATCATTGAAGGTTGA+AGG | - | chr8.4:47637238-47637257 | MS.gene34228:intron | 25.0% |
! | ATACGGAAAAAAAAGATACA+GGG | + | chr8.4:47640756-47640775 | None:intergenic | 25.0% |
! | CAAAGGCAATAATTAAACTA+TGG | + | chr8.4:47638968-47638987 | None:intergenic | 25.0% |
! | CAATCACAATTAGTATAATG+TGG | + | chr8.4:47639053-47639072 | None:intergenic | 25.0% |
! | CTTGATTGAAAATACTATCA+GGG | + | chr8.4:47639710-47639729 | None:intergenic | 25.0% |
! | GAAACTTTAAACCAAGTTAA+AGG | - | chr8.4:47641154-47641173 | MS.gene34228:intron | 25.0% |
! | GAAACTTTGAACTAAGTTAT+AGG | + | chr8.4:47640726-47640745 | None:intergenic | 25.0% |
! | GAAATGGAAAACTAAGAAAA+TGG | + | chr8.4:47636669-47636688 | None:intergenic | 25.0% |
! | GAAGAATAATGATTGCAAAA+TGG | - | chr8.4:47641390-47641409 | MS.gene34228:intron | 25.0% |
! | GCATAGATTCAAAACAATAT+GGG | - | chr8.4:47637386-47637405 | MS.gene34228:intron | 25.0% |
! | TAAATATTGCTTATAAGGCT+TGG | + | chr8.4:47637640-47637659 | None:intergenic | 25.0% |
! | TAATATCATTGAAGGTTGAA+GGG | - | chr8.4:47637239-47637258 | MS.gene34228:intron | 25.0% |
! | TACTAATTGTGATTGTTGAA+AGG | - | chr8.4:47639058-47639077 | MS.gene34228:intron | 25.0% |
! | TATAAACTTCCCTAATTGTA+AGG | - | chr8.4:47637602-47637621 | MS.gene34228:intron | 25.0% |
! | TATGCTTATTACCACAATAA+TGG | - | chr8.4:47637207-47637226 | MS.gene34228:intron | 25.0% |
! | TCTATGTCTAAAAACGATAA+TGG | - | chr8.4:47640807-47640826 | MS.gene34228:intron | 25.0% |
! | TGACCTAAATATTGCTTATA+AGG | + | chr8.4:47637645-47637664 | None:intergenic | 25.0% |
! | TGAGTATTTATGTATACTGT+TGG | + | chr8.4:47638575-47638594 | None:intergenic | 25.0% |
! | TGTTCGTCAATATATAATGT+GGG | + | chr8.4:47638253-47638272 | None:intergenic | 25.0% |
! | TTATGTGTCTTTAATAGAAC+TGG | - | chr8.4:47637288-47637307 | MS.gene34228:intron | 25.0% |
! | TTGTAATTAGGAAAAAATCC+TGG | - | chr8.4:47639292-47639311 | MS.gene34228:intron | 25.0% |
! | TTGTTAATTCACATATTCTG+TGG | - | chr8.4:47641583-47641602 | MS.gene34228:CDS | 25.0% |
! | TTGTTTCGTTATTCTTTGTT+TGG | + | chr8.4:47638735-47638754 | None:intergenic | 25.0% |
! | TTTAATATGCTCCTAAAATG+TGG | - | chr8.4:47636520-47636539 | MS.gene34228:CDS | 25.0% |
! | TTTACCCTACATAGTTTATA+GGG | - | chr8.4:47637033-47637052 | MS.gene34228:intron | 25.0% |
!! | AAGCCTTATAAGCAATATTT+AGG | - | chr8.4:47637639-47637658 | MS.gene34228:intron | 25.0% |
!! | AATATCTTTTTCCATGTTTC+AGG | - | chr8.4:47640080-47640099 | MS.gene34228:intron | 25.0% |
!! | AATTCCATAACTGAATTTTC+AGG | + | chr8.4:47639428-47639447 | None:intergenic | 25.0% |
!! | ATTAATACGGGTTTTTGATA+TGG | - | chr8.4:47639667-47639686 | MS.gene34228:intron | 25.0% |
!! | ATTACCACAATAATGGAAAA+TGG | - | chr8.4:47637214-47637233 | MS.gene34228:intron | 25.0% |
!! | CATTGTACTTTTCATTCAAA+TGG | - | chr8.4:47641344-47641363 | MS.gene34228:intron | 25.0% |
!! | CATTTGAATGAAAAGTACAA+TGG | + | chr8.4:47641346-47641365 | None:intergenic | 25.0% |
!! | CTGTCATTTATTTATGATCT+AGG | + | chr8.4:47639770-47639789 | None:intergenic | 25.0% |
!! | GAAAAGTACAATGGAAATTT+GGG | + | chr8.4:47641337-47641356 | None:intergenic | 25.0% |
!! | GTTATATTTTGTTACTAAGG+AGG | - | chr8.4:47636630-47636649 | MS.gene34228:CDS | 25.0% |
!! | GTTTGGTGAATAATTGTTTA+TGG | + | chr8.4:47638718-47638737 | None:intergenic | 25.0% |
!! | TCTATGGTATAATGTTTCTA+AGG | - | chr8.4:47638299-47638318 | MS.gene34228:intron | 25.0% |
!! | TGAAAAGTACAATGGAAATT+TGG | + | chr8.4:47641338-47641357 | None:intergenic | 25.0% |
!! | TTACCACAATAATGGAAAAT+GGG | - | chr8.4:47637215-47637234 | MS.gene34228:intron | 25.0% |
!! | TTTTATGACAAAATTACACC+GGG | - | chr8.4:47640697-47640716 | MS.gene34228:intron | 25.0% |
!!! | ATCCCCATAGTTTTAATTTT+TGG | - | chr8.4:47640606-47640625 | MS.gene34228:intron | 25.0% |
!!! | CTATCATTTTTTAGTGTCTA+TGG | - | chr8.4:47638283-47638302 | MS.gene34228:intron | 25.0% |
!!! | CTATTTTTATGTCTTTGCAA+TGG | + | chr8.4:47638531-47638550 | None:intergenic | 25.0% |
AACGAAACAATGAAACATTG+TGG | - | chr8.4:47638745-47638764 | MS.gene34228:intron | 30.0% | |
ACCCTTTCACTTATGAAATT+AGG | - | chr8.4:47639145-47639164 | MS.gene34228:intron | 30.0% | |
AGCCTAGTCATAAATCATTT+AGG | + | chr8.4:47641419-47641438 | None:intergenic | 30.0% | |
ATGGAAAACTAAGAAAATGG+AGG | + | chr8.4:47636666-47636685 | None:intergenic | 30.0% | |
CAAAACTTACTTGAAAGGAT+AGG | - | chr8.4:47637945-47637964 | MS.gene34228:CDS | 30.0% | |
CAAATGTCTGTATGATAGAA+AGG | + | chr8.4:47639587-47639606 | None:intergenic | 30.0% | |
CAGATACTGTATGATACTAA+AGG | - | chr8.4:47637265-47637284 | MS.gene34228:intron | 30.0% | |
CCTTGATTGAAAATACTATC+AGG | + | chr8.4:47639711-47639730 | None:intergenic | 30.0% | |
CTTAGTTCAAAGTTTCAAAC+AGG | - | chr8.4:47640730-47640749 | MS.gene34228:intron | 30.0% | |
CTTTCTATCATACAGACATT+TGG | - | chr8.4:47639585-47639604 | MS.gene34228:intron | 30.0% | |
GAAACATTTGTTTGCAAAAC+AGG | + | chr8.4:47641822-47641841 | None:intergenic | 30.0% | |
GAAATCCTTCATGAAAAGTA+GGG | + | chr8.4:47641256-47641275 | None:intergenic | 30.0% | |
GAGATTTATTAGCACTACTT+GGG | - | chr8.4:47637975-47637994 | MS.gene34228:CDS | 30.0% | |
GATACGGAAAAAAAAGATAC+AGG | + | chr8.4:47640757-47640776 | None:intergenic | 30.0% | |
GGAGGAAAAAGATTGTAATT+AGG | - | chr8.4:47639280-47639299 | MS.gene34228:intron | 30.0% | |
GTGTTCGTCAATATATAATG+TGG | + | chr8.4:47638254-47638273 | None:intergenic | 30.0% | |
GTTTACCCTACATAGTTTAT+AGG | - | chr8.4:47637032-47637051 | MS.gene34228:intron | 30.0% | |
TAAAAAAGACCAACCTGATA+CGG | + | chr8.4:47640773-47640792 | None:intergenic | 30.0% | |
TAATTGTGATTGTTGAAAGG+AGG | - | chr8.4:47639061-47639080 | MS.gene34228:intron | 30.0% | |
TACGTACACAAATTTGTAAG+AGG | - | chr8.4:47641039-47641058 | MS.gene34228:intron | 30.0% | |
TATTCTTCATTTCCTGTGTA+AGG | + | chr8.4:47641378-47641397 | None:intergenic | 30.0% | |
TATTGTACCAACCGAAATAA+AGG | + | chr8.4:47638400-47638419 | None:intergenic | 30.0% | |
TCTAGTGTTATCTTCAAACT+TGG | - | chr8.4:47638168-47638187 | MS.gene34228:CDS | 30.0% | |
TGATCTTTGACATTAAAGGA+GGG | - | chr8.4:47640349-47640368 | MS.gene34228:intron | 30.0% | |
TGGAAAACTAAGAAAATGGA+GGG | + | chr8.4:47636665-47636684 | None:intergenic | 30.0% | |
TGGAATGAATGCAAACTATA+GGG | + | chr8.4:47640580-47640599 | None:intergenic | 30.0% | |
TGTAATCTGTAATCAGTTTC+AGG | + | chr8.4:47641651-47641670 | None:intergenic | 30.0% | |
TTAATGTGCGAAAAAATGTC+AGG | - | chr8.4:47640151-47640170 | MS.gene34228:intron | 30.0% | |
TTAGGGAAGTTTATAGAAAC+AGG | + | chr8.4:47637597-47637616 | None:intergenic | 30.0% | |
TTGATCTTTGACATTAAAGG+AGG | - | chr8.4:47640348-47640367 | MS.gene34228:intron | 30.0% | |
TTGGATTAAAGAAACACATC+TGG | - | chr8.4:47638365-47638384 | MS.gene34228:intron | 30.0% | |
TTTATGACAAAATTACACCG+GGG | - | chr8.4:47640698-47640717 | MS.gene34228:intron | 30.0% | |
TTTGTAGAACCTGAATTTGT+TGG | - | chr8.4:47638334-47638353 | MS.gene34228:intron | 30.0% | |
! | ACAATGGAAATTTGGGATTT+AGG | + | chr8.4:47641330-47641349 | None:intergenic | 30.0% |
! | ATAATGTGGGTTTTCTAACT+TGG | + | chr8.4:47639039-47639058 | None:intergenic | 30.0% |
! | ATGGAATTTGAAGCTAAATC+TGG | - | chr8.4:47639440-47639459 | MS.gene34228:intron | 30.0% |
! | ATTAGTCTACAATGAAAACC+AGG | + | chr8.4:47639313-47639332 | None:intergenic | 30.0% |
! | CATTTGTTGAGGTTAATCAT+AGG | - | chr8.4:47638210-47638229 | MS.gene34228:CDS | 30.0% |
! | CCTGATAGTATTTTCAATCA+AGG | - | chr8.4:47639708-47639727 | MS.gene34228:intron | 30.0% |
! | GAAGTATTATGTAATGGTCA+TGG | - | chr8.4:47639862-47639881 | MS.gene34228:intron | 30.0% |
! | GACATGATACTGCTATTTAA+GGG | - | chr8.4:47641543-47641562 | MS.gene34228:intron | 30.0% |
! | TATCCCATTTTCCATTATTG+TGG | + | chr8.4:47637221-47637240 | None:intergenic | 30.0% |
! | TCTAAAAACGATAATGGTGT+TGG | - | chr8.4:47640813-47640832 | MS.gene34228:intron | 30.0% |
! | TGACATGATACTGCTATTTA+AGG | - | chr8.4:47641542-47641561 | MS.gene34228:intron | 30.0% |
! | TGTCAACAAGGTTCTAATTA+CGG | - | chr8.4:47640973-47640992 | MS.gene34228:intron | 30.0% |
! | TTGATTGTTACATTGCTGTT+TGG | - | chr8.4:47640535-47640554 | MS.gene34228:intron | 30.0% |
! | TTTTCCAACAGTACACTTAA+CGG | - | chr8.4:47638127-47638146 | MS.gene34228:intron | 30.0% |
! | TTTTTATGTCTTTGCAATGG+TGG | + | chr8.4:47638528-47638547 | None:intergenic | 30.0% |
!! | ACAATAGTGTCATTTGAAAG+AGG | - | chr8.4:47641461-47641480 | MS.gene34228:intron | 30.0% |
!! | TGTTTTTGTTAGGTATGATG+TGG | - | chr8.4:47639558-47639577 | MS.gene34228:intron | 30.0% |
!! | TTAGTTTTCCATTTCATTGC+AGG | - | chr8.4:47636674-47636693 | MS.gene34228:CDS | 30.0% |
!! | TTTGAAGTGATTTGTTGCAA+AGG | + | chr8.4:47638985-47639004 | None:intergenic | 30.0% |
!!! | CTTGTAGTCTTGTTTTTGTT+AGG | - | chr8.4:47639548-47639567 | MS.gene34228:intron | 30.0% |
!!! | GTATCTTTTTTTTCCGTATC+AGG | - | chr8.4:47640757-47640776 | MS.gene34228:intron | 30.0% |
!!! | TCATACTTTGTTTTCAGGTT+GGG | - | chr8.4:47640229-47640248 | MS.gene34228:intron | 30.0% |
!!! | TGATCTCATACTTTGTTTTC+AGG | - | chr8.4:47640224-47640243 | MS.gene34228:intron | 30.0% |
AAAACTATGGGGATCAAAAC+TGG | + | chr8.4:47640600-47640619 | None:intergenic | 35.0% | |
AAAAGTGGAACATAGAGTTG+TGG | + | chr8.4:47637165-47637184 | None:intergenic | 35.0% | |
AAACAAAGTATGAGATCACC+AGG | + | chr8.4:47640222-47640241 | None:intergenic | 35.0% | |
AAAGTGGAACATAGAGTTGT+GGG | + | chr8.4:47637164-47637183 | None:intergenic | 35.0% | |
AACAAAGTATGAGATCACCA+GGG | + | chr8.4:47640221-47640240 | None:intergenic | 35.0% | |
AACCCGTATTAATCCTTTCT+CGG | + | chr8.4:47639660-47639679 | None:intergenic | 35.0% | |
AAGAACTGAACCTTGAAATC+AGG | + | chr8.4:47640673-47640692 | None:intergenic | 35.0% | |
ACAACAACCAATATCTGGAT+TGG | - | chr8.4:47637346-47637365 | MS.gene34228:intron | 35.0% | |
ACACATTCTGATGATTCACA+TGG | + | chr8.4:47640189-47640208 | None:intergenic | 35.0% | |
AGAACTGAACCTTGAAATCA+GGG | + | chr8.4:47640672-47640691 | None:intergenic | 35.0% | |
AGCACCTTTATTGATGTCAA+AGG | + | chr8.4:47637707-47637726 | None:intergenic | 35.0% | |
ATACCATCACCAACAAATTC+AGG | + | chr8.4:47638346-47638365 | None:intergenic | 35.0% | |
ATTAATCCACTCATCTTCCT+CGG | + | chr8.4:47640136-47640155 | None:intergenic | 35.0% | |
ATTCCATACCTGCAATGAAA+TGG | + | chr8.4:47636685-47636704 | None:intergenic | 35.0% | |
CAAAAACAAGACTACAAGTC+AGG | + | chr8.4:47639546-47639565 | None:intergenic | 35.0% | |
CATGCCTTTGACATCAATAA+AGG | - | chr8.4:47637700-47637719 | MS.gene34228:intron | 35.0% | |
CGAGATTTATTAGCACTACT+TGG | - | chr8.4:47637974-47637993 | MS.gene34228:CDS | 35.0% | |
CTAGCCCTATAAACTATGTA+GGG | + | chr8.4:47637040-47637059 | None:intergenic | 35.0% | |
CTGGAATGAATGCAAACTAT+AGG | + | chr8.4:47640581-47640600 | None:intergenic | 35.0% | |
CTTATGGTGCATTATGAGTA+AGG | - | chr8.4:47637102-47637121 | MS.gene34228:intron | 35.0% | |
GACAAAACTCAAGACAACTA+TGG | + | chr8.4:47639961-47639980 | None:intergenic | 35.0% | |
GATTACAGTACAGATGAAAC+AGG | - | chr8.4:47636600-47636619 | MS.gene34228:CDS | 35.0% | |
GCTTCAGGTAGAATGTTATT+AGG | - | chr8.4:47636849-47636868 | MS.gene34228:intron | 35.0% | |
GGAAATCCAACAACACATAT+AGG | - | chr8.4:47637853-47637872 | MS.gene34228:intron | 35.0% | |
GGAAATCCTTCATGAAAAGT+AGG | + | chr8.4:47641257-47641276 | None:intergenic | 35.0% | |
GGTTATAAGTGTGAAAACAG+AGG | + | chr8.4:47637505-47637524 | None:intergenic | 35.0% | |
GTAGGGTAAACTAAACAGAT+TGG | + | chr8.4:47637023-47637042 | None:intergenic | 35.0% | |
GTATTATGTAATGGTCATGG+AGG | - | chr8.4:47639865-47639884 | MS.gene34228:intron | 35.0% | |
GTCTATCCTATATGTGTTGT+TGG | + | chr8.4:47637862-47637881 | None:intergenic | 35.0% | |
GTTCCGAGAAAGGATTAATA+CGG | - | chr8.4:47639654-47639673 | MS.gene34228:intron | 35.0% | |
TAAACCAAGTTAAAGGAACC+TGG | - | chr8.4:47641161-47641180 | MS.gene34228:intron | 35.0% | |
TCATTCTTAAGTTCCGAGAA+AGG | - | chr8.4:47639644-47639663 | MS.gene34228:intron | 35.0% | |
TCTAGCCCTATAAACTATGT+AGG | + | chr8.4:47637041-47637060 | None:intergenic | 35.0% | |
TGAAAATACTATCAGGGCAA+AGG | + | chr8.4:47639704-47639723 | None:intergenic | 35.0% | |
TGTAATCTTGCCTTTACGAT+CGG | + | chr8.4:47636587-47636606 | None:intergenic | 35.0% | |
TTAGAACCTTGTTGACAACA+AGG | + | chr8.4:47640970-47640989 | None:intergenic | 35.0% | |
TTATGACAAAATTACACCGG+GGG | - | chr8.4:47640699-47640718 | MS.gene34228:intron | 35.0% | |
TTCCGAGAAAGGATTAATAC+GGG | - | chr8.4:47639655-47639674 | MS.gene34228:intron | 35.0% | |
TTTCATTGCAGGTATGGAAT+TGG | - | chr8.4:47636685-47636704 | MS.gene34228:CDS | 35.0% | |
TTTCCAACAGTACACTTAAC+GGG | - | chr8.4:47638128-47638147 | MS.gene34228:intron | 35.0% | |
TTTCCATTTCATTGCAGGTA+TGG | - | chr8.4:47636679-47636698 | MS.gene34228:CDS | 35.0% | |
! | CGCATCACAGAAACAATTTT+GGG | - | chr8.4:47639099-47639118 | MS.gene34228:intron | 35.0% |
! | CTATACCACTATAGCAGTTT+TGG | + | chr8.4:47638498-47638517 | None:intergenic | 35.0% |
! | CTATCTGAGATTAACAACAC+AGG | + | chr8.4:47638456-47638475 | None:intergenic | 35.0% |
! | GAAGTAAATTTTCCCTCTCT+AGG | - | chr8.4:47637423-47637442 | MS.gene34228:intron | 35.0% |
! | GAGTATGTTGACATTTGTTG+AGG | - | chr8.4:47638199-47638218 | MS.gene34228:CDS | 35.0% |
! | GGAAATTTGGGATTTAGGTT+TGG | + | chr8.4:47641325-47641344 | None:intergenic | 35.0% |
! | GGTTACTAATCCTTCTGAAA+TGG | - | chr8.4:47641755-47641774 | MS.gene34228:intron | 35.0% |
! | GTGTTGTTAATCTCAGATAG+TGG | - | chr8.4:47638456-47638475 | MS.gene34228:intron | 35.0% |
! | GTTGAGCACAAACTCTAAAA+TGG | + | chr8.4:47637892-47637911 | None:intergenic | 35.0% |
! | TTATTGATGTCAAAGGCATG+AGG | + | chr8.4:47637700-47637719 | None:intergenic | 35.0% |
! | TTTGACATCAATAAAGGTGC+TGG | - | chr8.4:47637706-47637725 | MS.gene34228:intron | 35.0% |
!! | ACCAATATCTGGATTGGTTT+CGG | - | chr8.4:47637352-47637371 | MS.gene34228:intron | 35.0% |
!! | CCAAAATTGTTTCTGTGATG+CGG | + | chr8.4:47639101-47639120 | None:intergenic | 35.0% |
!! | GAATTTGTTGGTGATGGTAT+TGG | - | chr8.4:47638346-47638365 | MS.gene34228:intron | 35.0% |
!! | GAGGGTATCTATTGTTTGTA+GGG | + | chr8.4:47637478-47637497 | None:intergenic | 35.0% |
!!! | CTCATACTTTGTTTTCAGGT+TGG | - | chr8.4:47640228-47640247 | MS.gene34228:intron | 35.0% |
!!! | CTTTTTTTTCCGTATCAGGT+TGG | - | chr8.4:47640761-47640780 | MS.gene34228:intron | 35.0% |
AAAACCGCTACTTCTGAATG+CGG | - | chr8.4:47639251-47639270 | MS.gene34228:intron | 40.0% | |
AACATTCTACCTGAAGCTGA+AGG | + | chr8.4:47636846-47636865 | None:intergenic | 40.0% | |
AAGCACTTGCAGACAAGTTT+AGG | - | chr8.4:47636452-47636471 | MS.gene34228:CDS | 40.0% | |
AAGTGGAACATAGAGTTGTG+GGG | + | chr8.4:47637163-47637182 | None:intergenic | 40.0% | |
AATAGAACTGGTCCAGAATC+AGG | - | chr8.4:47637300-47637319 | MS.gene34228:intron | 40.0% | |
ACAAAAGCTGATGTTCAAGC+TGG | - | chr8.4:47641885-47641904 | MS.gene34228:intron | 40.0% | |
ACCACCACAAAGTATGAATG+TGG | - | chr8.4:47641845-47641864 | MS.gene34228:intron | 40.0% | |
AGCCTTAATTGCAGCAACTT+TGG | + | chr8.4:47638084-47638103 | None:intergenic | 40.0% | |
AGCTACAGCGACTTACTAAA+TGG | - | chr8.4:47637531-47637550 | MS.gene34228:intron | 40.0% | |
AGGACATCTCAATGTTAGAC+AGG | + | chr8.4:47639750-47639769 | None:intergenic | 40.0% | |
AGTCCTCTCACCTTACAATT+AGG | + | chr8.4:47637615-47637634 | None:intergenic | 40.0% | |
AGTTCAAACAACAGCAAAGG+CGG | - | chr8.4:47639400-47639419 | MS.gene34228:intron | 40.0% | |
AGTTTCCGGTCATTCATTCA+TGG | - | chr8.4:47639933-47639952 | MS.gene34228:intron | 40.0% | |
ATGGTCATCATTCCTTACAC+AGG | - | chr8.4:47641363-47641382 | MS.gene34228:intron | 40.0% | |
ATGTCCTTGATGCTCAAAGA+CGG | - | chr8.4:47640401-47640420 | MS.gene34228:intron | 40.0% | |
CAAGAAACGACACAGTGATA+TGG | + | chr8.4:47636970-47636989 | None:intergenic | 40.0% | |
CACAGTTCAAACAACAGCAA+AGG | - | chr8.4:47639397-47639416 | MS.gene34228:intron | 40.0% | |
CAGCTACAACAACCAATATC+TGG | - | chr8.4:47637341-47637360 | MS.gene34228:intron | 40.0% | |
CTATGATCACGATCAATCTG+AGG | - | chr8.4:47640465-47640484 | MS.gene34228:intron | 40.0% | |
GAAGCTAAATCTGGAAGAGA+TGG | - | chr8.4:47639449-47639468 | MS.gene34228:intron | 40.0% | |
GACATGGGCATCAAAGTAAA+GGG | + | chr8.4:47640386-47640405 | None:intergenic | 40.0% | |
GAGAAAAGAGCTGTATTGTG+CGG | - | chr8.4:47639204-47639223 | MS.gene34228:intron | 40.0% | |
GATCATCCAGCAAATGTTCA+TGG | - | chr8.4:47641726-47641745 | MS.gene34228:intron | 40.0% | |
GCCTTAATTGCAGCAACTTT+GGG | + | chr8.4:47638083-47638102 | None:intergenic | 40.0% | |
GGATCCACATTCATACTTTG+TGG | + | chr8.4:47641852-47641871 | None:intergenic | 40.0% | |
GGCTCCTGAAAATTCAGTTA+TGG | - | chr8.4:47639421-47639440 | MS.gene34228:intron | 40.0% | |
GTAATCTTGCCTTTACGATC+GGG | + | chr8.4:47636586-47636605 | None:intergenic | 40.0% | |
GTCCTCTCACCTTACAATTA+GGG | + | chr8.4:47637614-47637633 | None:intergenic | 40.0% | |
GTTGAGTCATTATCCTTCCT+GGG | + | chr8.4:47636800-47636819 | None:intergenic | 40.0% | |
GTTTCTCACTTCTCAGTTTC+CGG | - | chr8.4:47639919-47639938 | MS.gene34228:intron | 40.0% | |
TAAGTGAAAGGGTTCCACTT+CGG | + | chr8.4:47639138-47639157 | None:intergenic | 40.0% | |
TACACCAGGTTCCTTTAACT+TGG | + | chr8.4:47641168-47641187 | None:intergenic | 40.0% | |
TCCACATTCATACTTTGTGG+TGG | + | chr8.4:47641849-47641868 | None:intergenic | 40.0% | |
TCCGAAACCAATCCAGATAT+TGG | + | chr8.4:47637356-47637375 | None:intergenic | 40.0% | |
TCTTTGAGCATCAAGGACAT+GGG | + | chr8.4:47640401-47640420 | None:intergenic | 40.0% | |
TGAAGTCTCTACTCAAAACC+TGG | - | chr8.4:47641968-47641987 | MS.gene34228:CDS | 40.0% | |
TGTGAAAACAGAGGAATCGA+GGG | + | chr8.4:47637496-47637515 | None:intergenic | 40.0% | |
TTAGGTCATATTTACAGGCG+AGG | - | chr8.4:47637657-47637676 | MS.gene34228:intron | 40.0% | |
TTCCCTAATTGTAAGGTGAG+AGG | - | chr8.4:47637609-47637628 | MS.gene34228:intron | 40.0% | |
TTGAGTCATTATCCTTCCTG+GGG | + | chr8.4:47636799-47636818 | None:intergenic | 40.0% | |
! | AGGTTGTCGCTGTAGATTTT+TGG | - | chr8.4:47640438-47640457 | MS.gene34228:intron | 40.0% |
! | ATTCAGAAGTAGCGGTTTTG+CGG | + | chr8.4:47639250-47639269 | None:intergenic | 40.0% |
! | CCCTTAATTGCAGCACTTTT+GGG | + | chr8.4:47637750-47637769 | None:intergenic | 40.0% |
! | CCGCATCACAGAAACAATTT+TGG | - | chr8.4:47639098-47639117 | MS.gene34228:intron | 40.0% |
! | CTGTTGTTTGAACTGTGTAC+GGG | + | chr8.4:47639394-47639413 | None:intergenic | 40.0% |
! | GCTCTATCCTTTATTTCGGT+TGG | - | chr8.4:47638390-47638409 | MS.gene34228:intron | 40.0% |
! | GCTGTTGTTTGAACTGTGTA+CGG | + | chr8.4:47639395-47639414 | None:intergenic | 40.0% |
! | GGCGTGATATTTAACTTTGC+AGG | + | chr8.4:47636756-47636775 | None:intergenic | 40.0% |
! | GGCTGCTCTATCCTTTATTT+CGG | - | chr8.4:47638386-47638405 | MS.gene34228:intron | 40.0% |
! | TGCTTTTGCACCATTTCAGA+AGG | + | chr8.4:47641768-47641787 | None:intergenic | 40.0% |
! | TTGTGACCTTGTTGTCAACA+AGG | - | chr8.4:47640961-47640980 | MS.gene34228:intron | 40.0% |
!! | ACATATTCTGTGGTTTTGCC+AGG | - | chr8.4:47641593-47641612 | MS.gene34228:CDS | 40.0% |
!! | CATATCACTGTGTCGTTTCT+TGG | - | chr8.4:47636968-47636987 | MS.gene34228:intron | 40.0% |
!! | CCAAAAGTGCTGCAATTAAG+GGG | - | chr8.4:47637748-47637767 | MS.gene34228:intron | 40.0% |
!! | CCCAAAAGTGCTGCAATTAA+GGG | - | chr8.4:47637747-47637766 | MS.gene34228:intron | 40.0% |
!! | CGAGGGTATCTATTGTTTGT+AGG | + | chr8.4:47637479-47637498 | None:intergenic | 40.0% |
!! | CTCTCTGAAATACCTAGAGA+GGG | + | chr8.4:47637438-47637457 | None:intergenic | 40.0% |
!! | GAACCTGAATTTGTTGGTGA+TGG | - | chr8.4:47638340-47638359 | MS.gene34228:intron | 40.0% |
!! | GCTTTTGTTTCAGCTTTCGT+TGG | + | chr8.4:47641873-47641892 | None:intergenic | 40.0% |
!! | TAAGTCGCTGTAGCTTTAGT+TGG | + | chr8.4:47637526-47637545 | None:intergenic | 40.0% |
!! | TGGCTTTGTAGACCATGTAA+TGG | - | chr8.4:47640056-47640075 | MS.gene34228:intron | 40.0% |
!! | TTGAGCCCTACTTTTCATGA+AGG | - | chr8.4:47641248-47641267 | MS.gene34228:intron | 40.0% |
!!! | ACTATAGCAGTTTTGGTGTC+CGG | + | chr8.4:47638491-47638510 | None:intergenic | 40.0% |
!!! | AGGTTTTGAGTAGAGACTTC+AGG | + | chr8.4:47641969-47641988 | None:intergenic | 40.0% |
AAATGTTAACTAGTGCCCCC+GGG | - | chr8.4:47638797-47638816 | MS.gene34228:CDS | 45.0% | |
AAGTGAAAGGGTTCCACTTC+GGG | + | chr8.4:47639137-47639156 | None:intergenic | 45.0% | |
AATCTGGAAGAGATGGAGCA+TGG | - | chr8.4:47639456-47639475 | MS.gene34228:intron | 45.0% | |
AATGATTCCAGTGAATGCGG+CGG | + | chr8.4:47641931-47641950 | None:intergenic | 45.0% | |
ACATTTGGAGAGCAGTGATC+CGG | - | chr8.4:47639600-47639619 | MS.gene34228:intron | 45.0% | |
ACTACTTGGGCCATATCTCT+AGG | - | chr8.4:47637988-47638007 | MS.gene34228:CDS | 45.0% | |
AGCAAATGTTCATGGTGCGA+GGG | - | chr8.4:47641734-47641753 | MS.gene34228:intron | 45.0% | |
AGCTGTATTGTGCGGTGATT+TGG | - | chr8.4:47639212-47639231 | MS.gene34228:intron | 45.0% | |
AGTGAATCACCCGATCGTAA+AGG | - | chr8.4:47636574-47636593 | MS.gene34228:CDS | 45.0% | |
AGTGCTGCAATTAAGGGGTA+GGG | - | chr8.4:47637753-47637772 | MS.gene34228:intron | 45.0% | |
CACTAGCACTTCCTGAAACA+TGG | + | chr8.4:47640094-47640113 | None:intergenic | 45.0% | |
CCATTCACCCAACACAATGA+AGG | - | chr8.4:47638033-47638052 | MS.gene34228:intron | 45.0% | |
CCTTCATTGTGTTGGGTGAA+TGG | + | chr8.4:47638036-47638055 | None:intergenic | 45.0% | |
CTACGCCATTTACCTGATTC+TGG | + | chr8.4:47637315-47637334 | None:intergenic | 45.0% | |
CTCCGACAAATCTTCCTAAG+CGG | + | chr8.4:47641627-47641646 | None:intergenic | 45.0% | |
CTGGTCCAGAATCAGGTAAA+TGG | - | chr8.4:47637307-47637326 | MS.gene34228:intron | 45.0% | |
GAAATGTTAACTAGTGCCCC+CGG | - | chr8.4:47638796-47638815 | MS.gene34228:CDS | 45.0% | |
GAACTAAGTTATAGGACCCC+CGG | + | chr8.4:47640718-47640737 | None:intergenic | 45.0% | |
GCCCAAAGTTGCTGCAATTA+AGG | - | chr8.4:47638079-47638098 | MS.gene34228:intron | 45.0% | |
GGACACCAAAACTGCTATAG+TGG | - | chr8.4:47638490-47638509 | MS.gene34228:intron | 45.0% | |
GGACATGGGCATCAAAGTAA+AGG | + | chr8.4:47640387-47640406 | None:intergenic | 45.0% | |
GGCAATGATTCCAGTGAATG+CGG | + | chr8.4:47641934-47641953 | None:intergenic | 45.0% | |
GGTTGAGTCATTATCCTTCC+TGG | + | chr8.4:47636801-47636820 | None:intergenic | 45.0% | |
GTAGGGGAGGATTGCAATTA+AGG | - | chr8.4:47637770-47637789 | MS.gene34228:intron | 45.0% | |
GTCATATTTACAGGCGAGGT+AGG | - | chr8.4:47637661-47637680 | MS.gene34228:intron | 45.0% | |
GTCTTTGAGCATCAAGGACA+TGG | + | chr8.4:47640402-47640421 | None:intergenic | 45.0% | |
GTGTGAAAACAGAGGAATCG+AGG | + | chr8.4:47637497-47637516 | None:intergenic | 45.0% | |
GTTCTAATTACGGAGCTGAG+TGG | - | chr8.4:47640983-47641002 | MS.gene34228:intron | 45.0% | |
TAAATATCACGCCCATGCCT+CGG | - | chr8.4:47636763-47636782 | MS.gene34228:CDS | 45.0% | |
TACCACATCGCCTAGAGATA+TGG | + | chr8.4:47638001-47638020 | None:intergenic | 45.0% | |
TCCAGCACCTTCATTGTGTT+GGG | + | chr8.4:47638043-47638062 | None:intergenic | 45.0% | |
TGGCACCATGAATGAATGAC+CGG | + | chr8.4:47639941-47639960 | None:intergenic | 45.0% | |
! | AAGTGCTGCAATTAAGGGGT+AGG | - | chr8.4:47637752-47637771 | MS.gene34228:intron | 45.0% |
! | CCCCTTAATTGCAGCACTTT+TGG | + | chr8.4:47637751-47637770 | None:intergenic | 45.0% |
! | GTTAATCTCAGATAGTGGCG+CGG | - | chr8.4:47638461-47638480 | MS.gene34228:intron | 45.0% |
! | TCGGTTGGTACAATACTGCT+GGG | - | chr8.4:47638405-47638424 | MS.gene34228:intron | 45.0% |
! | TGCCGCTTAGGAAGATTTGT+CGG | - | chr8.4:47641622-47641641 | MS.gene34228:CDS | 45.0% |
! | TTCGGTTGGTACAATACTGC+TGG | - | chr8.4:47638404-47638423 | MS.gene34228:intron | 45.0% |
!! | AGCATGCTTAAAGAGTGCTC+CGG | - | chr8.4:47638923-47638942 | MS.gene34228:intron | 45.0% |
!! | GACATCAATAAAGGTGCTGG+AGG | - | chr8.4:47637709-47637728 | MS.gene34228:intron | 45.0% |
!! | GCCCAAAAGTGCTGCAATTA+AGG | - | chr8.4:47637746-47637765 | MS.gene34228:intron | 45.0% |
!! | GCTCTCTGAAATACCTAGAG+AGG | + | chr8.4:47637439-47637458 | None:intergenic | 45.0% |
!! | GGATTGGTTCCCTGATTTCA+AGG | - | chr8.4:47640660-47640679 | MS.gene34228:intron | 45.0% |
!!! | AACGGGCTGGAAACTGTTTT+AGG | - | chr8.4:47638145-47638164 | MS.gene34228:intron | 45.0% |
!!! | CTAGTGCGTTTTGCTGGTTT+TGG | - | chr8.4:47640108-47640127 | MS.gene34228:intron | 45.0% |
!!! | TTTTGCTGGTTTTGGATCCG+AGG | - | chr8.4:47640116-47640135 | MS.gene34228:intron | 45.0% |
!! | AAATAAATGAAAAAAAAATA+AGG | + | chr8.4:47640640-47640659 | None:intergenic | 5.0% |
!! | AATAAATGAAAAAAAAATAA+GGG | + | chr8.4:47640639-47640658 | None:intergenic | 5.0% |
!!! | TTATTTTTTTTTCATTTATT+TGG | - | chr8.4:47640639-47640658 | MS.gene34228:intron | 5.0% |
!!! | TTTATATATCTTATTTTTTA+TGG | + | chr8.4:47638650-47638669 | None:intergenic | 5.0% |
AATGTTAACTAGTGCCCCCG+GGG | - | chr8.4:47638798-47638817 | MS.gene34228:CDS | 50.0% | |
CAGCAAATGTTCATGGTGCG+AGG | - | chr8.4:47641733-47641752 | MS.gene34228:intron | 50.0% | |
CAGCCCGTTAAGTGTACTGT+TGG | + | chr8.4:47638134-47638153 | None:intergenic | 50.0% | |
CTACTCAAAACCTGGCCGAA+GGG | - | chr8.4:47641976-47641995 | MS.gene34228:CDS | 50.0% | |
CTCCAGCACCTTCATTGTGT+TGG | + | chr8.4:47638044-47638063 | None:intergenic | 50.0% | |
CTCGCACCATGAACATTTGC+TGG | + | chr8.4:47641735-47641754 | None:intergenic | 50.0% | |
GACTTCAGGAACACTGCTAG+TGG | + | chr8.4:47641955-47641974 | None:intergenic | 50.0% | |
GCAATCTTCTGCTGATCCGT+GGG | + | chr8.4:47641702-47641721 | None:intergenic | 50.0% | |
GCAATTAAGGCTGCTACAGG+CGG | - | chr8.4:47638092-47638111 | MS.gene34228:intron | 50.0% | |
GCGAGGTAGGACTAAAGGTA+CGG | - | chr8.4:47637674-47637693 | MS.gene34228:intron | 50.0% | |
GCTGCAATTAAGGCTGCTAC+AGG | - | chr8.4:47638089-47638108 | MS.gene34228:intron | 50.0% | |
GCTTGAAGAACATCTCGTGC+TGG | + | chr8.4:47636436-47636455 | None:intergenic | 50.0% | |
GCTTGGAGCATGGACAACAT+GGG | - | chr8.4:47637832-47637851 | MS.gene34228:intron | 50.0% | |
GGATCAGCAGAAGATTGCGT+TGG | - | chr8.4:47641704-47641723 | MS.gene34228:intron | 50.0% | |
GGGGAGGATTGCAATTAAGG+CGG | - | chr8.4:47637773-47637792 | MS.gene34228:intron | 50.0% | |
GTCAAATCAGTCCGAGGCAT+GGG | + | chr8.4:47636777-47636796 | None:intergenic | 50.0% | |
GTGCTGCAATTAAGGGGTAG+GGG | - | chr8.4:47637754-47637773 | MS.gene34228:intron | 50.0% | |
TACAGGCGAGGTAGGACTAA+AGG | - | chr8.4:47637669-47637688 | MS.gene34228:intron | 50.0% | |
TACTTCTGAATGCGGCTCAC+AGG | - | chr8.4:47639259-47639278 | MS.gene34228:intron | 50.0% | |
TAGGTCCTTAACAAGTGCCC+CGG | + | chr8.4:47638818-47638837 | None:intergenic | 50.0% | |
TCCTTGATGCTCAAAGACGG+AGG | - | chr8.4:47640404-47640423 | MS.gene34228:intron | 50.0% | |
TCTACTCAAAACCTGGCCGA+AGG | - | chr8.4:47641975-47641994 | MS.gene34228:CDS | 50.0% | |
TGAGCCGCATTCAGAAGTAG+CGG | + | chr8.4:47639258-47639277 | None:intergenic | 50.0% | |
TGTGAATGATGCAGCACCCA+CGG | - | chr8.4:47641683-47641702 | MS.gene34228:CDS | 50.0% | |
TTGGATCCGAGGAAGATGAG+TGG | - | chr8.4:47640127-47640146 | MS.gene34228:intron | 50.0% | |
! | AAAGGGTTCCACTTCGGGTT+TGG | + | chr8.4:47639132-47639151 | None:intergenic | 50.0% |
! | ACCCAACACAATGAAGGTGC+TGG | - | chr8.4:47638039-47638058 | MS.gene34228:intron | 50.0% |
! | AGACGGAGGCATGATGTAAG+AGG | - | chr8.4:47640418-47640437 | MS.gene34228:intron | 50.0% |
! | CAACAGTACACTTAACGGGC+TGG | - | chr8.4:47638132-47638151 | MS.gene34228:intron | 50.0% |
! | CGGTGATTTGGAACCGATTG+CGG | - | chr8.4:47639224-47639243 | MS.gene34228:intron | 50.0% |
! | GTTTTCCTCCAAACCCGAAG+TGG | - | chr8.4:47639121-47639140 | MS.gene34228:intron | 50.0% |
!! | ATGCTTAAAGAGTGCTCCGG+GGG | - | chr8.4:47638926-47638945 | MS.gene34228:CDS | 50.0% |
!! | CATGCTTAAAGAGTGCTCCG+GGG | - | chr8.4:47638925-47638944 | MS.gene34228:CDS | 50.0% |
!! | GAAGTGCTAGTGCGTTTTGC+TGG | - | chr8.4:47640102-47640121 | MS.gene34228:intron | 50.0% |
!! | GCATGCTTAAAGAGTGCTCC+GGG | - | chr8.4:47638924-47638943 | MS.gene34228:CDS | 50.0% |
AGGTCCTTAACAAGTGCCCC+GGG | + | chr8.4:47638817-47638836 | None:intergenic | 55.0% | |
CGCAATCTTCTGCTGATCCG+TGG | + | chr8.4:47641703-47641722 | None:intergenic | 55.0% | |
CTACCTGAAGCTGAAGGAGC+AGG | + | chr8.4:47636840-47636859 | None:intergenic | 55.0% | |
CTGCAATTAAGGGGTAGGGG+AGG | - | chr8.4:47637757-47637776 | MS.gene34228:intron | 55.0% | |
GAAGCTGAAGGAGCAGGAAC+AGG | + | chr8.4:47636834-47636853 | None:intergenic | 55.0% | |
GATTCACATGGCAGAGAGCG+CGG | + | chr8.4:47640177-47640196 | None:intergenic | 55.0% | |
GCAGGAACAGGAGAAGCTGT+TGG | + | chr8.4:47636822-47636841 | None:intergenic | 55.0% | |
GCCTCCGTCTTTGAGCATCA+AGG | + | chr8.4:47640408-47640427 | None:intergenic | 55.0% | |
GGCCATATCTCTAGGCGATG+TGG | - | chr8.4:47637996-47638015 | MS.gene34228:CDS | 55.0% | |
GGCTTGGAGCATGGACAACA+TGG | - | chr8.4:47637831-47637850 | MS.gene34228:intron | 55.0% | |
GGTCAAATCAGTCCGAGGCA+TGG | + | chr8.4:47636778-47636797 | None:intergenic | 55.0% | |
GTCCATGCTCCAAGCCAACT+TGG | + | chr8.4:47637827-47637846 | None:intergenic | 55.0% | |
GTTCCTGCTCCTTCAGCTTC+AGG | - | chr8.4:47636834-47636853 | MS.gene34228:intron | 55.0% | |
TCCTAAGCGGCACGATTTCC+TGG | + | chr8.4:47641614-47641633 | None:intergenic | 55.0% | |
TTCTGAATGCGGCTCACAGG+AGG | - | chr8.4:47639262-47639281 | MS.gene34228:intron | 55.0% | |
! | GGTGCTGGAGCTTGCAATGA+AGG | - | chr8.4:47638054-47638073 | MS.gene34228:intron | 55.0% |
! | GTCTTGTTAACGAGTGCCCC+CGG | + | chr8.4:47638945-47638964 | None:intergenic | 55.0% |
!! | GGACTGATTTGACCCCAGGA+AGG | - | chr8.4:47636784-47636803 | MS.gene34228:intron | 55.0% |
AACTTGGCCTGGGTGTGAGC+TGG | + | chr8.4:47637811-47637830 | None:intergenic | 60.0% | |
ACTTGGCCTGGGTGTGAGCT+GGG | + | chr8.4:47637810-47637829 | None:intergenic | 60.0% | |
AGCTCACACCCAGGCCAAGT+TGG | - | chr8.4:47637810-47637829 | MS.gene34228:intron | 60.0% | |
CCTGGGGTCAAATCAGTCCG+AGG | + | chr8.4:47636783-47636802 | None:intergenic | 60.0% | |
GAATGTGTCGCAGTGCTCCC+TGG | - | chr8.4:47640201-47640220 | MS.gene34228:intron | 60.0% | |
GCTCCAAGCCAACTTGGCCT+GGG | + | chr8.4:47637821-47637840 | None:intergenic | 60.0% | |
GGTCCTTAACAAGTGCCCCG+GGG | + | chr8.4:47638816-47638835 | None:intergenic | 60.0% | |
GTCCTTAACAAGTGCCCCGG+GGG | + | chr8.4:47638815-47638834 | None:intergenic | 60.0% | |
TGCTCCAAGCCAACTTGGCC+TGG | + | chr8.4:47637822-47637841 | None:intergenic | 60.0% | |
! | ACACCCAGGCCAAGTTGGCT+TGG | - | chr8.4:47637815-47637834 | MS.gene34228:intron | 60.0% |
! | AGCGGTTTTGCGGCCGCAAT+CGG | + | chr8.4:47639240-47639259 | None:intergenic | 60.0% |
! | GGGTTCCACTTCGGGTTTGG+AGG | + | chr8.4:47639129-47639148 | None:intergenic | 60.0% |
!! | CCTCGGACTGATTTGACCCC+AGG | - | chr8.4:47636780-47636799 | MS.gene34228:intron | 60.0% |
!! | GCCAGGAAATCGTGCCGCTT+AGG | - | chr8.4:47641610-47641629 | MS.gene34228:CDS | 60.0% |
!! | GGCCAAGTTGGCTTGGAGCA+TGG | - | chr8.4:47637822-47637841 | MS.gene34228:intron | 60.0% |
CCAGTGAATGCGGCGGTGCT+TGG | + | chr8.4:47641924-47641943 | None:intergenic | 65.0% | |
CTGACACCCAGCTCACACCC+AGG | - | chr8.4:47637801-47637820 | MS.gene34228:intron | 65.0% | |
! | CAGATAGTGGCGCGGTGCAC+CGG | - | chr8.4:47638469-47638488 | MS.gene34228:intron | 65.0% |
! | CCAAGCACCGCCGCATTCAC+TGG | - | chr8.4:47641921-47641940 | MS.gene34228:intron | 65.0% |
! | TGCCCCCGGGGCACTTGTTA+AGG | - | chr8.4:47638810-47638829 | MS.gene34228:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 47636397 | 47642004 | 47636397 | ID=MS.gene34228 |
chr8.4 | mRNA | 47636397 | 47642004 | 47636397 | ID=MS.gene34228.t1;Parent=MS.gene34228 |
chr8.4 | exon | 47641928 | 47642004 | 47641928 | ID=MS.gene34228.t1.exon1;Parent=MS.gene34228.t1 |
chr8.4 | CDS | 47641928 | 47642004 | 47641928 | ID=cds.MS.gene34228.t1;Parent=MS.gene34228.t1 |
chr8.4 | exon | 47641780 | 47641825 | 47641780 | ID=MS.gene34228.t1.exon2;Parent=MS.gene34228.t1 |
chr8.4 | CDS | 47641780 | 47641825 | 47641780 | ID=cds.MS.gene34228.t1;Parent=MS.gene34228.t1 |
chr8.4 | exon | 47641546 | 47641705 | 47641546 | ID=MS.gene34228.t1.exon3;Parent=MS.gene34228.t1 |
chr8.4 | CDS | 47641546 | 47641705 | 47641546 | ID=cds.MS.gene34228.t1;Parent=MS.gene34228.t1 |
chr8.4 | exon | 47638924 | 47638999 | 47638924 | ID=MS.gene34228.t1.exon4;Parent=MS.gene34228.t1 |
chr8.4 | CDS | 47638924 | 47638999 | 47638924 | ID=cds.MS.gene34228.t1;Parent=MS.gene34228.t1 |
chr8.4 | exon | 47638780 | 47638831 | 47638780 | ID=MS.gene34228.t1.exon5;Parent=MS.gene34228.t1 |
chr8.4 | CDS | 47638780 | 47638831 | 47638780 | ID=cds.MS.gene34228.t1;Parent=MS.gene34228.t1 |
chr8.4 | exon | 47638156 | 47638299 | 47638156 | ID=MS.gene34228.t1.exon6;Parent=MS.gene34228.t1 |
chr8.4 | CDS | 47638156 | 47638299 | 47638156 | ID=cds.MS.gene34228.t1;Parent=MS.gene34228.t1 |
chr8.4 | exon | 47637915 | 47638034 | 47637915 | ID=MS.gene34228.t1.exon7;Parent=MS.gene34228.t1 |
chr8.4 | CDS | 47637915 | 47638034 | 47637915 | ID=cds.MS.gene34228.t1;Parent=MS.gene34228.t1 |
chr8.4 | exon | 47636397 | 47636786 | 47636397 | ID=MS.gene34228.t1.exon8;Parent=MS.gene34228.t1 |
chr8.4 | CDS | 47636397 | 47636786 | 47636397 | ID=cds.MS.gene34228.t1;Parent=MS.gene34228.t1 |
Gene Sequence |
Protein sequence |