Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34563.t1 | AET01504.2 | 68 | 459 | 114 | 7 | 1 | 434 | 1 | 451 | 4.10E-164 | 587.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34563.t1 | Q8H1R7 | 28.9 | 446 | 261 | 13 | 17 | 434 | 2 | 419 | 2.9e-33 | 144.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34563.t1 | G7LGM4 | 68.0 | 459 | 114 | 7 | 1 | 434 | 1 | 451 | 3.0e-164 | 587.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene34563 | MS.gene072000 | PPI |
MS.gene34563 | MS.gene033695 | PPI |
MS.gene34563 | MS.gene78164 | PPI |
MS.gene34563 | MS.gene54959 | PPI |
MS.gene071257 | MS.gene34563 | PPI |
MS.gene54960 | MS.gene34563 | PPI |
MS.gene34563 | MS.gene01653 | PPI |
MS.gene34563 | MS.gene024262 | PPI |
MS.gene34563 | MS.gene51793 | PPI |
MS.gene34563 | MS.gene033694 | PPI |
MS.gene34563 | MS.gene045772 | PPI |
MS.gene047137 | MS.gene34563 | PPI |
MS.gene34563 | MS.gene002112 | PPI |
MS.gene34563 | MS.gene065373 | PPI |
MS.gene34563 | MS.gene51795 | PPI |
MS.gene34563 | MS.gene047136 | PPI |
MS.gene072003 | MS.gene34563 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34563.t1 | MTR_8g014260 | 67.974 | 459 | 114 | 7 | 1 | 434 | 1 | 451 | 0.0 | 583 |
MS.gene34563.t1 | MTR_4g024710 | 83.813 | 278 | 43 | 2 | 158 | 434 | 71 | 347 | 3.69e-163 | 463 |
MS.gene34563.t1 | MTR_4g024745 | 85.496 | 262 | 36 | 2 | 157 | 417 | 24 | 284 | 1.01e-149 | 426 |
MS.gene34563.t1 | MTR_8g445780 | 57.598 | 408 | 135 | 6 | 1 | 388 | 1 | 390 | 7.96e-145 | 418 |
MS.gene34563.t1 | MTR_8g077460 | 47.140 | 437 | 166 | 12 | 1 | 434 | 1 | 375 | 6.89e-110 | 328 |
MS.gene34563.t1 | MTR_5g092960 | 43.129 | 473 | 213 | 16 | 1 | 433 | 5 | 461 | 3.57e-99 | 304 |
MS.gene34563.t1 | MTR_8g014210 | 63.913 | 230 | 83 | 0 | 205 | 434 | 2 | 231 | 1.13e-94 | 285 |
MS.gene34563.t1 | MTR_8g468810 | 41.474 | 475 | 225 | 16 | 1 | 434 | 1 | 463 | 2.98e-94 | 291 |
MS.gene34563.t1 | MTR_8g062270 | 41.921 | 458 | 205 | 13 | 17 | 433 | 16 | 453 | 5.99e-92 | 285 |
MS.gene34563.t1 | MTR_2g083840 | 42.174 | 460 | 221 | 16 | 7 | 434 | 11 | 457 | 8.18e-91 | 283 |
MS.gene34563.t1 | MTR_8g058970 | 41.393 | 488 | 221 | 19 | 1 | 434 | 1 | 477 | 4.43e-89 | 279 |
MS.gene34563.t1 | MTR_8g468840 | 41.342 | 462 | 224 | 15 | 1 | 431 | 2 | 447 | 1.59e-85 | 269 |
MS.gene34563.t1 | MTR_8g014160 | 40.044 | 452 | 180 | 13 | 12 | 434 | 36 | 425 | 1.92e-85 | 268 |
MS.gene34563.t1 | MTR_8g467800 | 40.042 | 472 | 221 | 15 | 5 | 434 | 2 | 453 | 1.93e-84 | 266 |
MS.gene34563.t1 | MTR_4g032730 | 38.144 | 485 | 229 | 18 | 1 | 433 | 1 | 466 | 1.09e-77 | 249 |
MS.gene34563.t1 | MTR_8g468760 | 39.121 | 455 | 200 | 16 | 14 | 433 | 6 | 418 | 1.68e-73 | 236 |
MS.gene34563.t1 | MTR_4g024720 | 62.802 | 207 | 56 | 4 | 1 | 193 | 1 | 200 | 2.50e-73 | 229 |
MS.gene34563.t1 | MTR_8g058965 | 38.248 | 468 | 232 | 15 | 11 | 434 | 2 | 456 | 8.73e-73 | 236 |
MS.gene34563.t1 | MTR_8g469020 | 37.061 | 456 | 238 | 13 | 17 | 434 | 7 | 451 | 3.00e-72 | 234 |
MS.gene34563.t1 | MTR_8g070950 | 39.525 | 463 | 222 | 19 | 1 | 434 | 1 | 434 | 2.12e-71 | 232 |
MS.gene34563.t1 | MTR_8g468810 | 41.361 | 382 | 178 | 13 | 1 | 347 | 1 | 371 | 2.60e-68 | 222 |
MS.gene34563.t1 | MTR_5g092960 | 41.470 | 381 | 175 | 13 | 1 | 347 | 5 | 371 | 5.02e-67 | 219 |
MS.gene34563.t1 | MTR_8g062010 | 35.762 | 453 | 240 | 18 | 8 | 434 | 3 | 430 | 4.32e-66 | 218 |
MS.gene34563.t1 | MTR_8g062310 | 37.360 | 447 | 208 | 18 | 17 | 434 | 25 | 428 | 3.02e-65 | 216 |
MS.gene34563.t1 | MTR_8g062080 | 34.624 | 465 | 243 | 18 | 5 | 434 | 7 | 445 | 2.17e-62 | 208 |
MS.gene34563.t1 | MTR_8g468810 | 40.118 | 339 | 160 | 10 | 1 | 310 | 1 | 325 | 1.96e-59 | 197 |
MS.gene34563.t1 | MTR_8g468810 | 41.066 | 319 | 149 | 9 | 1 | 290 | 1 | 309 | 3.87e-59 | 196 |
MS.gene34563.t1 | MTR_8g468810 | 41.066 | 319 | 149 | 9 | 1 | 290 | 1 | 309 | 1.01e-58 | 196 |
MS.gene34563.t1 | MTR_4g050250 | 36.706 | 425 | 213 | 16 | 3 | 380 | 4 | 419 | 3.03e-54 | 186 |
MS.gene34563.t1 | MTR_5g021550 | 55.952 | 168 | 58 | 6 | 5 | 165 | 4 | 162 | 1.31e-50 | 169 |
MS.gene34563.t1 | MTR_8g062300 | 31.138 | 501 | 254 | 18 | 1 | 434 | 1 | 477 | 3.15e-46 | 166 |
MS.gene34563.t1 | MTR_8g467800 | 40.308 | 325 | 144 | 12 | 5 | 296 | 2 | 309 | 7.96e-46 | 162 |
MS.gene34563.t1 | MTR_8g014290 | 50.932 | 161 | 66 | 4 | 12 | 165 | 5 | 159 | 2.81e-39 | 139 |
MS.gene34563.t1 | MTR_5g084070 | 30.837 | 454 | 247 | 17 | 6 | 427 | 2 | 420 | 1.12e-37 | 142 |
MS.gene34563.t1 | MTR_4g024770 | 92.063 | 63 | 5 | 0 | 1 | 63 | 8 | 70 | 7.52e-35 | 124 |
MS.gene34563.t1 | MTR_8g467790 | 31.078 | 399 | 207 | 18 | 17 | 389 | 148 | 504 | 1.21e-34 | 135 |
MS.gene34563.t1 | MTR_2g086020 | 31.328 | 399 | 178 | 15 | 45 | 434 | 4 | 315 | 1.49e-34 | 131 |
MS.gene34563.t1 | MTR_1g041245 | 27.356 | 435 | 240 | 15 | 17 | 434 | 11 | 386 | 6.65e-31 | 122 |
MS.gene34563.t1 | MTR_5g008950 | 25.909 | 440 | 227 | 13 | 19 | 434 | 1 | 365 | 1.06e-29 | 119 |
MS.gene34563.t1 | MTR_8g014230 | 63.291 | 79 | 29 | 0 | 346 | 424 | 17 | 95 | 5.11e-28 | 107 |
MS.gene34563.t1 | MTR_5g080710 | 27.983 | 461 | 264 | 18 | 9 | 433 | 25 | 453 | 8.18e-28 | 115 |
MS.gene34563.t1 | MTR_8g014220 | 35.211 | 213 | 61 | 6 | 1 | 190 | 1 | 159 | 6.34e-27 | 106 |
MS.gene34563.t1 | MTR_8g014180 | 81.818 | 55 | 10 | 0 | 1 | 55 | 1 | 55 | 3.56e-25 | 97.8 |
MS.gene34563.t1 | MTR_6g040270 | 26.591 | 440 | 239 | 20 | 15 | 432 | 2 | 379 | 6.47e-25 | 105 |
MS.gene34563.t1 | MTR_7g032380 | 23.653 | 427 | 236 | 14 | 17 | 434 | 11 | 356 | 7.89e-25 | 105 |
MS.gene34563.t1 | MTR_1089s0010 | 26.027 | 438 | 244 | 17 | 14 | 434 | 5 | 379 | 2.58e-24 | 103 |
MS.gene34563.t1 | MTR_7g056433 | 27.523 | 436 | 250 | 17 | 12 | 434 | 7 | 389 | 6.19e-24 | 103 |
MS.gene34563.t1 | MTR_7g098510 | 26.126 | 444 | 262 | 16 | 2 | 434 | 3 | 391 | 4.67e-22 | 97.8 |
MS.gene34563.t1 | MTR_4g056040 | 28.078 | 463 | 252 | 16 | 11 | 409 | 3 | 448 | 7.64e-22 | 98.2 |
MS.gene34563.t1 | MTR_3g082890 | 26.582 | 474 | 238 | 18 | 1 | 434 | 81 | 484 | 4.34e-21 | 95.9 |
MS.gene34563.t1 | MTR_4g056030 | 27.211 | 441 | 240 | 16 | 11 | 402 | 3 | 411 | 3.59e-20 | 92.8 |
MS.gene34563.t1 | MTR_7g032370 | 25.362 | 414 | 238 | 16 | 29 | 434 | 2 | 352 | 9.12e-20 | 90.5 |
MS.gene34563.t1 | MTR_7g034115 | 26.950 | 423 | 242 | 17 | 17 | 428 | 11 | 377 | 1.27e-19 | 90.5 |
MS.gene34563.t1 | MTR_4g056070 | 27.494 | 451 | 236 | 16 | 11 | 387 | 3 | 436 | 2.63e-19 | 90.1 |
MS.gene34563.t1 | MTR_5g008920 | 23.725 | 451 | 250 | 14 | 7 | 434 | 2 | 381 | 7.14e-19 | 88.2 |
MS.gene34563.t1 | MTR_3g105060 | 26.005 | 423 | 245 | 18 | 17 | 434 | 14 | 373 | 1.05e-18 | 87.8 |
MS.gene34563.t1 | MTR_4g080787 | 26.744 | 430 | 256 | 16 | 16 | 402 | 18 | 431 | 2.00e-18 | 87.8 |
MS.gene34563.t1 | MTR_4g098590 | 28.960 | 404 | 217 | 17 | 19 | 402 | 1 | 354 | 3.94e-18 | 85.9 |
MS.gene34563.t1 | MTR_7g115270 | 24.706 | 425 | 275 | 17 | 16 | 431 | 11 | 399 | 6.09e-18 | 85.5 |
MS.gene34563.t1 | MTR_4g056020 | 26.932 | 427 | 239 | 16 | 11 | 392 | 3 | 401 | 6.42e-18 | 85.9 |
MS.gene34563.t1 | MTR_3g107120 | 25.612 | 449 | 237 | 16 | 17 | 434 | 9 | 391 | 7.56e-18 | 85.5 |
MS.gene34563.t1 | MTR_7g026500 | 26.879 | 439 | 241 | 18 | 17 | 433 | 14 | 394 | 1.09e-17 | 85.1 |
MS.gene34563.t1 | MTR_6g044572 | 26.991 | 452 | 231 | 22 | 17 | 434 | 2 | 388 | 1.54e-17 | 84.3 |
MS.gene34563.t1 | MTR_1g038710 | 28.764 | 445 | 252 | 19 | 2 | 402 | 4 | 427 | 2.65e-17 | 84.3 |
MS.gene34563.t1 | MTR_1g107385 | 27.533 | 454 | 254 | 21 | 2 | 432 | 20 | 421 | 4.40e-17 | 83.2 |
MS.gene34563.t1 | MTR_1g016340 | 25.223 | 448 | 284 | 17 | 7 | 426 | 4 | 428 | 5.83e-17 | 83.2 |
MS.gene34563.t1 | MTR_1g016340 | 25.223 | 448 | 284 | 17 | 7 | 426 | 9 | 433 | 7.77e-17 | 82.8 |
MS.gene34563.t1 | MTR_6g044560 | 26.797 | 459 | 237 | 22 | 10 | 434 | 171 | 564 | 9.24e-17 | 82.8 |
MS.gene34563.t1 | MTR_5g073420 | 25.688 | 436 | 240 | 16 | 17 | 434 | 11 | 380 | 2.17e-16 | 80.9 |
MS.gene34563.t1 | MTR_7g056420 | 26.014 | 419 | 233 | 16 | 16 | 426 | 8 | 357 | 2.17e-16 | 82.4 |
MS.gene34563.t1 | MTR_7g055943 | 24.661 | 442 | 249 | 16 | 17 | 434 | 40 | 421 | 2.31e-16 | 81.3 |
MS.gene34563.t1 | MTR_4g055990 | 26.625 | 477 | 247 | 18 | 11 | 406 | 3 | 457 | 2.68e-16 | 81.3 |
MS.gene34563.t1 | MTR_7g056430 | 26.014 | 419 | 233 | 16 | 16 | 426 | 8 | 357 | 3.09e-16 | 81.6 |
MS.gene34563.t1 | MTR_4g055990 | 26.625 | 477 | 247 | 18 | 11 | 406 | 3 | 457 | 3.16e-16 | 80.9 |
MS.gene34563.t1 | MTR_3g087260 | 25.720 | 486 | 255 | 17 | 15 | 433 | 10 | 456 | 5.76e-16 | 80.1 |
MS.gene34563.t1 | MTR_2g082800 | 26.392 | 413 | 254 | 17 | 6 | 393 | 17 | 404 | 7.45e-16 | 79.3 |
MS.gene34563.t1 | MTR_3g448340 | 25.917 | 436 | 258 | 17 | 17 | 402 | 6 | 426 | 8.19e-16 | 79.7 |
MS.gene34563.t1 | MTR_4g113810 | 34.286 | 175 | 87 | 5 | 98 | 251 | 1 | 168 | 9.10e-16 | 75.1 |
MS.gene34563.t1 | MTR_2g072720 | 26.222 | 450 | 238 | 17 | 5 | 398 | 27 | 438 | 1.65e-15 | 79.0 |
MS.gene34563.t1 | MTR_2g007450 | 35.196 | 179 | 98 | 6 | 11 | 179 | 10 | 180 | 2.15e-15 | 78.2 |
MS.gene34563.t1 | MTR_1g108820 | 26.622 | 447 | 227 | 22 | 17 | 432 | 8 | 384 | 4.85e-15 | 76.6 |
MS.gene34563.t1 | MTR_5g045170 | 25.057 | 435 | 244 | 19 | 19 | 432 | 16 | 389 | 1.15e-14 | 75.9 |
MS.gene34563.t1 | MTR_1g115250 | 25.054 | 463 | 252 | 19 | 2 | 418 | 18 | 431 | 1.55e-14 | 75.5 |
MS.gene34563.t1 | MTR_1g021820 | 28.626 | 262 | 151 | 11 | 11 | 264 | 22 | 255 | 1.78e-14 | 75.5 |
MS.gene34563.t1 | MTR_7g083740 | 27.907 | 215 | 118 | 6 | 7 | 209 | 3 | 192 | 2.14e-14 | 74.7 |
MS.gene34563.t1 | MTR_2g007500 | 27.919 | 394 | 204 | 15 | 7 | 382 | 4 | 335 | 2.61e-14 | 73.9 |
MS.gene34563.t1 | MTR_1g021825 | 24.413 | 426 | 268 | 15 | 1 | 402 | 1 | 396 | 4.53e-14 | 73.9 |
MS.gene34563.t1 | MTR_2g005990 | 23.918 | 439 | 260 | 19 | 17 | 432 | 6 | 393 | 5.04e-14 | 73.9 |
MS.gene34563.t1 | MTR_1g014450 | 24.670 | 454 | 283 | 23 | 4 | 428 | 3 | 426 | 5.77e-14 | 73.9 |
MS.gene34563.t1 | MTR_1g016310 | 26.642 | 274 | 171 | 11 | 1 | 264 | 3 | 256 | 7.58e-14 | 72.8 |
MS.gene34563.t1 | MTR_0009s0080 | 24.940 | 417 | 236 | 16 | 6 | 402 | 8 | 367 | 8.54e-14 | 73.2 |
MS.gene34563.t1 | MTR_3g071850 | 25.231 | 432 | 247 | 17 | 17 | 426 | 24 | 401 | 1.33e-13 | 73.6 |
MS.gene34563.t1 | MTR_3g107100 | 30.392 | 204 | 109 | 7 | 11 | 196 | 5 | 193 | 1.40e-13 | 72.4 |
MS.gene34563.t1 | MTR_3g107160 | 28.910 | 211 | 114 | 7 | 11 | 200 | 4 | 199 | 1.69e-13 | 72.0 |
MS.gene34563.t1 | MTR_1g016310 | 26.642 | 274 | 171 | 11 | 1 | 264 | 3 | 256 | 1.99e-13 | 72.0 |
MS.gene34563.t1 | MTR_2g007360 | 25.000 | 448 | 235 | 17 | 8 | 432 | 3 | 372 | 2.23e-13 | 71.6 |
MS.gene34563.t1 | MTR_1g021825 | 23.821 | 424 | 269 | 14 | 3 | 402 | 74 | 467 | 2.31e-13 | 72.0 |
MS.gene34563.t1 | MTR_2g008320 | 24.722 | 449 | 250 | 18 | 9 | 434 | 44 | 427 | 4.61e-13 | 71.2 |
MS.gene34563.t1 | MTR_3g114200 | 30.814 | 172 | 98 | 4 | 4 | 171 | 2 | 156 | 5.28e-13 | 67.0 |
MS.gene34563.t1 | MTR_3g099830 | 24.434 | 442 | 227 | 18 | 17 | 432 | 12 | 372 | 5.65e-13 | 70.5 |
MS.gene34563.t1 | MTR_2g047872 | 24.512 | 461 | 288 | 21 | 3 | 434 | 7 | 436 | 5.73e-13 | 70.9 |
MS.gene34563.t1 | MTR_8g085430 | 28.054 | 221 | 111 | 7 | 17 | 208 | 11 | 212 | 5.74e-13 | 70.1 |
MS.gene34563.t1 | MTR_2g047858 | 29.520 | 271 | 147 | 14 | 13 | 271 | 111 | 349 | 7.06e-13 | 70.9 |
MS.gene34563.t1 | MTR_7g007080 | 28.470 | 281 | 153 | 10 | 15 | 263 | 2 | 266 | 1.13e-12 | 69.7 |
MS.gene34563.t1 | MTR_4g055580 | 25.478 | 471 | 246 | 17 | 11 | 402 | 94 | 538 | 1.96e-12 | 69.3 |
MS.gene34563.t1 | MTR_3g026920 | 26.058 | 449 | 245 | 19 | 11 | 431 | 13 | 402 | 2.23e-12 | 68.9 |
MS.gene34563.t1 | MTR_4g092430 | 41.111 | 90 | 41 | 2 | 3 | 88 | 25 | 106 | 2.23e-12 | 68.9 |
MS.gene34563.t1 | MTR_4g092430 | 41.111 | 90 | 41 | 2 | 3 | 88 | 25 | 106 | 2.55e-12 | 68.9 |
MS.gene34563.t1 | MTR_2g007550 | 31.551 | 187 | 95 | 7 | 1 | 180 | 1 | 161 | 3.10e-12 | 67.8 |
MS.gene34563.t1 | MTR_5g083890 | 25.367 | 477 | 213 | 21 | 13 | 428 | 2 | 396 | 5.74e-12 | 67.8 |
MS.gene34563.t1 | MTR_3g113782 | 40.625 | 64 | 38 | 0 | 1 | 64 | 1 | 64 | 6.54e-12 | 61.6 |
MS.gene34563.t1 | MTR_7g033990 | 37.500 | 120 | 65 | 3 | 17 | 134 | 11 | 122 | 8.72e-12 | 67.0 |
MS.gene34563.t1 | MTR_4g051640 | 36.364 | 88 | 48 | 1 | 1 | 88 | 14 | 93 | 1.52e-11 | 62.8 |
MS.gene34563.t1 | MTR_1g011430 | 27.801 | 241 | 129 | 9 | 12 | 240 | 2 | 209 | 1.77e-11 | 65.9 |
MS.gene34563.t1 | MTR_1g115245 | 28.421 | 190 | 107 | 7 | 2 | 175 | 12 | 188 | 2.19e-11 | 65.1 |
MS.gene34563.t1 | MTR_7g056447 | 28.042 | 189 | 106 | 7 | 12 | 198 | 4 | 164 | 5.25e-11 | 63.5 |
MS.gene34563.t1 | MTR_0049s0110 | 21.333 | 450 | 281 | 14 | 17 | 433 | 8 | 417 | 5.52e-11 | 64.7 |
MS.gene34563.t1 | MTR_3g048290 | 25.918 | 463 | 276 | 17 | 17 | 433 | 23 | 464 | 5.91e-11 | 64.7 |
MS.gene34563.t1 | MTR_2g047848 | 23.144 | 458 | 280 | 22 | 12 | 433 | 2 | 423 | 6.16e-11 | 64.3 |
MS.gene34563.t1 | MTR_3g023470 | 30.247 | 162 | 88 | 6 | 7 | 166 | 5 | 143 | 7.08e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34563.t1 | AT4G26340 | 29.176 | 449 | 256 | 15 | 17 | 434 | 2 | 419 | 5.35e-37 | 140 |
MS.gene34563.t1 | AT5G56370 | 27.790 | 457 | 252 | 17 | 17 | 433 | 2 | 420 | 1.07e-29 | 120 |
MS.gene34563.t1 | AT5G56370 | 27.790 | 457 | 252 | 17 | 17 | 433 | 2 | 420 | 1.07e-29 | 120 |
MS.gene34563.t1 | AT5G56420 | 26.667 | 450 | 265 | 18 | 17 | 434 | 6 | 422 | 3.11e-28 | 115 |
MS.gene34563.t1 | AT5G56420 | 26.667 | 450 | 265 | 18 | 17 | 434 | 6 | 422 | 3.11e-28 | 115 |
MS.gene34563.t1 | AT5G56420 | 26.667 | 450 | 265 | 18 | 17 | 434 | 6 | 422 | 3.11e-28 | 115 |
MS.gene34563.t1 | AT3G52680 | 28.178 | 472 | 267 | 18 | 1 | 433 | 6 | 444 | 4.79e-28 | 115 |
MS.gene34563.t1 | AT4G26350 | 25.926 | 459 | 267 | 16 | 17 | 434 | 2 | 428 | 1.81e-26 | 110 |
MS.gene34563.t1 | AT5G53840 | 26.752 | 471 | 250 | 20 | 10 | 431 | 13 | 437 | 2.03e-26 | 111 |
MS.gene34563.t1 | AT5G56440 | 26.923 | 468 | 251 | 19 | 17 | 433 | 2 | 429 | 1.13e-25 | 108 |
MS.gene34563.t1 | AT4G00160 | 27.637 | 474 | 269 | 19 | 1 | 433 | 1 | 441 | 1.37e-25 | 108 |
MS.gene34563.t1 | AT5G38570 | 26.588 | 425 | 253 | 17 | 17 | 433 | 2 | 375 | 1.47e-25 | 107 |
MS.gene34563.t1 | AT5G38590 | 27.014 | 422 | 237 | 17 | 17 | 404 | 2 | 386 | 1.73e-24 | 105 |
MS.gene34563.t1 | AT2G26860 | 29.561 | 433 | 228 | 19 | 17 | 406 | 2 | 400 | 4.15e-24 | 103 |
MS.gene34563.t1 | AT2G26860 | 29.561 | 433 | 228 | 19 | 17 | 406 | 2 | 400 | 4.15e-24 | 103 |
MS.gene34563.t1 | AT1G32375 | 25.664 | 452 | 271 | 16 | 17 | 434 | 2 | 422 | 7.65e-24 | 103 |
MS.gene34563.t1 | AT1G32375 | 25.664 | 452 | 271 | 16 | 17 | 434 | 2 | 422 | 7.65e-24 | 103 |
MS.gene34563.t1 | AT3G49030 | 28.194 | 454 | 259 | 21 | 15 | 433 | 19 | 440 | 9.87e-24 | 103 |
MS.gene34563.t1 | AT4G10400 | 26.058 | 449 | 260 | 17 | 17 | 434 | 2 | 409 | 2.79e-23 | 101 |
MS.gene34563.t1 | AT4G10400 | 26.058 | 449 | 260 | 17 | 17 | 434 | 2 | 409 | 2.79e-23 | 101 |
MS.gene34563.t1 | AT4G10400 | 26.058 | 449 | 260 | 17 | 17 | 434 | 2 | 409 | 2.79e-23 | 101 |
MS.gene34563.t1 | AT4G13965 | 27.703 | 444 | 259 | 18 | 17 | 431 | 10 | 420 | 3.25e-23 | 101 |
MS.gene34563.t1 | AT1G16930 | 25.478 | 471 | 276 | 15 | 10 | 434 | 8 | 449 | 5.78e-23 | 101 |
MS.gene34563.t1 | AT1G16930 | 25.478 | 471 | 276 | 15 | 10 | 434 | 8 | 449 | 5.78e-23 | 101 |
MS.gene34563.t1 | AT1G16930 | 25.478 | 471 | 276 | 15 | 10 | 434 | 8 | 449 | 5.78e-23 | 101 |
MS.gene34563.t1 | AT1G51370 | 27.790 | 457 | 254 | 18 | 10 | 429 | 13 | 430 | 1.59e-22 | 99.8 |
MS.gene34563.t1 | AT3G26930 | 27.021 | 470 | 266 | 16 | 6 | 434 | 10 | 443 | 4.90e-21 | 95.5 |
MS.gene34563.t1 | AT3G52680 | 28.224 | 411 | 215 | 16 | 1 | 384 | 6 | 363 | 9.19e-21 | 93.6 |
MS.gene34563.t1 | AT3G51530 | 25.895 | 475 | 276 | 19 | 1 | 434 | 14 | 453 | 9.27e-21 | 94.7 |
MS.gene34563.t1 | AT5G22730 | 26.282 | 468 | 264 | 17 | 16 | 432 | 27 | 464 | 1.36e-20 | 94.4 |
MS.gene34563.t1 | AT5G22730 | 26.282 | 468 | 264 | 17 | 16 | 432 | 27 | 464 | 1.36e-20 | 94.4 |
MS.gene34563.t1 | AT5G22610 | 26.164 | 451 | 264 | 19 | 16 | 431 | 17 | 433 | 2.15e-20 | 93.6 |
MS.gene34563.t1 | AT5G56400 | 26.294 | 483 | 264 | 21 | 1 | 434 | 16 | 455 | 2.43e-20 | 93.2 |
MS.gene34563.t1 | AT1G78750 | 24.632 | 475 | 294 | 16 | 1 | 431 | 1 | 455 | 5.18e-20 | 92.4 |
MS.gene34563.t1 | AT1G78750 | 24.632 | 475 | 294 | 16 | 1 | 431 | 1 | 455 | 5.18e-20 | 92.4 |
MS.gene34563.t1 | AT1G06630 | 28.398 | 412 | 235 | 13 | 17 | 391 | 12 | 400 | 1.22e-19 | 90.9 |
MS.gene34563.t1 | AT1G06630 | 28.398 | 412 | 235 | 13 | 17 | 391 | 12 | 400 | 1.22e-19 | 90.9 |
MS.gene34563.t1 | AT1G06630 | 28.398 | 412 | 235 | 13 | 17 | 391 | 12 | 400 | 1.22e-19 | 90.9 |
MS.gene34563.t1 | AT1G06630 | 28.398 | 412 | 235 | 13 | 17 | 391 | 12 | 400 | 1.22e-19 | 90.9 |
MS.gene34563.t1 | AT1G06630 | 31.159 | 276 | 145 | 9 | 17 | 264 | 12 | 270 | 1.30e-19 | 89.4 |
MS.gene34563.t1 | AT1G06630 | 28.398 | 412 | 235 | 13 | 17 | 391 | 21 | 409 | 1.65e-19 | 90.5 |
MS.gene34563.t1 | AT1G06630 | 31.159 | 276 | 145 | 9 | 17 | 264 | 12 | 270 | 1.90e-19 | 89.7 |
MS.gene34563.t1 | AT1G06630 | 31.159 | 276 | 145 | 9 | 17 | 264 | 12 | 270 | 1.90e-19 | 89.7 |
MS.gene34563.t1 | AT1G78760 | 23.729 | 472 | 282 | 18 | 4 | 432 | 5 | 441 | 3.05e-19 | 90.1 |
MS.gene34563.t1 | AT2G04230 | 26.144 | 459 | 293 | 17 | 7 | 434 | 3 | 446 | 5.00e-19 | 89.4 |
MS.gene34563.t1 | AT1G06630 | 31.159 | 276 | 145 | 9 | 17 | 264 | 12 | 270 | 5.74e-19 | 89.4 |
MS.gene34563.t1 | AT3G59200 | 31.469 | 286 | 131 | 12 | 17 | 264 | 7 | 265 | 8.44e-19 | 87.8 |
MS.gene34563.t1 | AT1G13780 | 24.348 | 460 | 286 | 16 | 17 | 431 | 10 | 452 | 8.71e-19 | 88.6 |
MS.gene34563.t1 | AT3G50710 | 26.154 | 455 | 270 | 18 | 17 | 434 | 2 | 427 | 1.13e-18 | 88.2 |
MS.gene34563.t1 | AT5G44490 | 24.947 | 473 | 290 | 20 | 1 | 431 | 1 | 450 | 1.72e-18 | 87.8 |
MS.gene34563.t1 | AT3G59200 | 26.337 | 486 | 256 | 19 | 17 | 431 | 7 | 461 | 1.85e-18 | 88.2 |
MS.gene34563.t1 | AT5G60610 | 26.429 | 420 | 242 | 16 | 17 | 403 | 2 | 387 | 2.26e-18 | 87.0 |
MS.gene34563.t1 | AT5G60610 | 26.429 | 420 | 242 | 16 | 17 | 403 | 2 | 387 | 2.26e-18 | 87.0 |
MS.gene34563.t1 | AT5G44490 | 24.947 | 473 | 290 | 20 | 1 | 431 | 1 | 450 | 2.34e-18 | 87.4 |
MS.gene34563.t1 | AT5G38590 | 28.413 | 271 | 150 | 10 | 17 | 263 | 2 | 252 | 3.67e-18 | 84.7 |
MS.gene34563.t1 | AT2G26030 | 24.468 | 470 | 270 | 16 | 17 | 431 | 4 | 443 | 3.68e-18 | 86.7 |
MS.gene34563.t1 | AT1G80470 | 22.388 | 469 | 293 | 15 | 1 | 432 | 1 | 435 | 4.24e-18 | 86.7 |
MS.gene34563.t1 | AT5G56370 | 28.977 | 352 | 187 | 15 | 17 | 343 | 2 | 315 | 4.68e-18 | 85.1 |
MS.gene34563.t1 | AT2G26030 | 25.053 | 471 | 261 | 18 | 17 | 431 | 4 | 438 | 5.22e-18 | 86.3 |
MS.gene34563.t1 | AT2G26030 | 25.053 | 471 | 261 | 18 | 17 | 431 | 4 | 438 | 5.22e-18 | 86.3 |
MS.gene34563.t1 | AT5G44950 | 27.546 | 432 | 243 | 18 | 17 | 405 | 4 | 408 | 6.14e-18 | 85.9 |
MS.gene34563.t1 | AT5G22660 | 24.946 | 461 | 272 | 17 | 16 | 431 | 12 | 443 | 1.05e-17 | 85.5 |
MS.gene34563.t1 | AT5G56380 | 25.054 | 463 | 277 | 16 | 17 | 434 | 2 | 439 | 1.32e-17 | 85.1 |
MS.gene34563.t1 | AT5G56380 | 25.054 | 463 | 277 | 16 | 17 | 434 | 2 | 439 | 1.32e-17 | 85.1 |
MS.gene34563.t1 | AT5G22610 | 25.210 | 476 | 267 | 20 | 16 | 431 | 17 | 463 | 1.80e-17 | 85.1 |
MS.gene34563.t1 | AT3G58860 | 30.855 | 269 | 147 | 10 | 14 | 257 | 4 | 258 | 1.97e-17 | 84.7 |
MS.gene34563.t1 | AT1G51370 | 28.109 | 402 | 215 | 16 | 10 | 375 | 13 | 376 | 2.11e-17 | 84.3 |
MS.gene34563.t1 | AT5G56820 | 26.383 | 470 | 244 | 21 | 11 | 431 | 7 | 423 | 3.50e-17 | 83.6 |
MS.gene34563.t1 | AT4G09920 | 30.120 | 249 | 130 | 10 | 17 | 240 | 2 | 231 | 3.79e-17 | 82.0 |
MS.gene34563.t1 | AT4G09920 | 30.120 | 249 | 130 | 10 | 17 | 240 | 2 | 231 | 3.79e-17 | 82.0 |
MS.gene34563.t1 | AT4G09920 | 30.120 | 249 | 130 | 10 | 17 | 240 | 2 | 231 | 3.79e-17 | 82.0 |
MS.gene34563.t1 | AT5G27750 | 24.364 | 472 | 284 | 18 | 17 | 434 | 5 | 457 | 5.41e-17 | 83.2 |
MS.gene34563.t1 | AT3G26922 | 30.258 | 271 | 145 | 11 | 16 | 262 | 13 | 263 | 5.52e-17 | 81.6 |
MS.gene34563.t1 | AT3G26922 | 30.258 | 271 | 145 | 11 | 16 | 262 | 13 | 263 | 5.52e-17 | 81.6 |
MS.gene34563.t1 | AT4G15060 | 29.762 | 252 | 141 | 11 | 14 | 243 | 23 | 260 | 7.33e-17 | 82.8 |
MS.gene34563.t1 | AT4G09920 | 30.120 | 249 | 130 | 10 | 17 | 240 | 2 | 231 | 7.44e-17 | 81.6 |
MS.gene34563.t1 | AT4G09920 | 30.120 | 249 | 130 | 10 | 17 | 240 | 2 | 231 | 7.44e-17 | 81.6 |
MS.gene34563.t1 | AT5G41840 | 30.287 | 383 | 195 | 17 | 17 | 341 | 14 | 382 | 1.00e-16 | 82.8 |
MS.gene34563.t1 | AT1G66310 | 23.126 | 467 | 295 | 14 | 1 | 431 | 1 | 439 | 1.43e-16 | 82.0 |
MS.gene34563.t1 | AT4G15060 | 29.719 | 249 | 139 | 11 | 17 | 243 | 172 | 406 | 1.50e-16 | 82.4 |
MS.gene34563.t1 | AT5G50270 | 26.773 | 437 | 253 | 19 | 17 | 416 | 2 | 408 | 3.41e-16 | 80.5 |
MS.gene34563.t1 | AT5G56690 | 25.472 | 424 | 248 | 17 | 19 | 402 | 4 | 399 | 3.42e-16 | 80.5 |
MS.gene34563.t1 | AT3G26920 | 27.139 | 339 | 206 | 12 | 121 | 433 | 16 | 339 | 3.94e-16 | 79.7 |
MS.gene34563.t1 | AT3G26920 | 27.139 | 339 | 206 | 12 | 121 | 433 | 16 | 339 | 3.94e-16 | 79.7 |
MS.gene34563.t1 | AT4G13985 | 23.779 | 471 | 304 | 15 | 1 | 431 | 1 | 456 | 4.55e-16 | 80.5 |
MS.gene34563.t1 | AT3G49020 | 25.490 | 459 | 284 | 17 | 8 | 434 | 13 | 445 | 5.02e-16 | 80.1 |
MS.gene34563.t1 | AT1G66290 | 23.640 | 478 | 258 | 22 | 11 | 431 | 23 | 450 | 5.99e-16 | 80.1 |
MS.gene34563.t1 | AT4G27050 | 30.208 | 288 | 152 | 13 | 17 | 270 | 4 | 276 | 6.44e-16 | 80.1 |
MS.gene34563.t1 | AT4G27050 | 30.208 | 288 | 152 | 13 | 17 | 270 | 4 | 276 | 6.44e-16 | 80.1 |
MS.gene34563.t1 | AT4G27050 | 30.208 | 288 | 152 | 13 | 17 | 270 | 4 | 276 | 6.44e-16 | 80.1 |
MS.gene34563.t1 | AT4G27050 | 30.208 | 288 | 152 | 13 | 17 | 270 | 4 | 276 | 6.44e-16 | 80.1 |
MS.gene34563.t1 | AT4G27050 | 30.208 | 288 | 152 | 13 | 17 | 270 | 4 | 276 | 6.44e-16 | 80.1 |
MS.gene34563.t1 | AT1G69630 | 24.733 | 469 | 284 | 17 | 1 | 426 | 1 | 443 | 6.45e-16 | 80.1 |
MS.gene34563.t1 | AT5G53635 | 23.340 | 467 | 263 | 15 | 19 | 433 | 2 | 425 | 7.01e-16 | 79.7 |
MS.gene34563.t1 | AT3G58920 | 26.477 | 491 | 264 | 20 | 17 | 434 | 2 | 468 | 7.09e-16 | 80.1 |
MS.gene34563.t1 | AT1G66320 | 24.096 | 498 | 246 | 23 | 6 | 432 | 19 | 455 | 4.23e-15 | 77.4 |
MS.gene34563.t1 | AT5G56800 | 28.519 | 270 | 156 | 13 | 182 | 434 | 95 | 344 | 4.93e-15 | 76.6 |
MS.gene34563.t1 | AT5G22720 | 25.610 | 492 | 253 | 23 | 11 | 433 | 17 | 464 | 4.93e-15 | 77.4 |
MS.gene34563.t1 | AT3G49480 | 26.258 | 457 | 257 | 18 | 16 | 425 | 11 | 434 | 5.64e-15 | 77.0 |
MS.gene34563.t1 | AT3G59190 | 30.314 | 287 | 158 | 13 | 5 | 264 | 2 | 273 | 5.69e-15 | 76.6 |
MS.gene34563.t1 | AT3G59190 | 30.314 | 287 | 158 | 13 | 5 | 264 | 2 | 273 | 8.88e-15 | 76.6 |
MS.gene34563.t1 | AT5G56810 | 26.637 | 443 | 271 | 14 | 17 | 431 | 15 | 431 | 1.10e-14 | 76.3 |
MS.gene34563.t1 | AT4G00315 | 24.359 | 468 | 274 | 22 | 17 | 433 | 2 | 440 | 1.28e-14 | 75.9 |
MS.gene34563.t1 | AT5G62970 | 23.567 | 471 | 282 | 20 | 17 | 433 | 2 | 448 | 2.12e-14 | 75.1 |
MS.gene34563.t1 | AT4G14103 | 29.643 | 280 | 142 | 12 | 17 | 264 | 8 | 264 | 2.33e-14 | 75.1 |
MS.gene34563.t1 | AT4G14103 | 26.455 | 378 | 200 | 17 | 17 | 360 | 8 | 341 | 2.76e-14 | 74.7 |
MS.gene34563.t1 | AT4G14103 | 26.455 | 378 | 200 | 17 | 17 | 360 | 8 | 341 | 2.76e-14 | 74.7 |
MS.gene34563.t1 | AT1G51370 | 27.624 | 362 | 194 | 14 | 10 | 341 | 13 | 336 | 2.96e-14 | 73.9 |
MS.gene34563.t1 | AT3G58880 | 27.671 | 365 | 214 | 15 | 17 | 345 | 3 | 353 | 8.28e-14 | 73.6 |
MS.gene34563.t1 | AT5G25860 | 24.480 | 433 | 235 | 19 | 9 | 373 | 4 | 412 | 1.58e-13 | 72.4 |
MS.gene34563.t1 | AT1G55660 | 24.628 | 471 | 269 | 23 | 17 | 433 | 53 | 491 | 1.70e-13 | 72.8 |
MS.gene34563.t1 | AT1G13780 | 26.006 | 323 | 180 | 13 | 17 | 296 | 10 | 316 | 2.01e-13 | 71.6 |
MS.gene34563.t1 | AT5G22670 | 24.843 | 479 | 273 | 19 | 5 | 434 | 2 | 442 | 5.06e-13 | 70.9 |
MS.gene34563.t1 | AT3G58930 | 32.584 | 178 | 103 | 7 | 17 | 185 | 2 | 171 | 5.58e-13 | 70.9 |
MS.gene34563.t1 | AT3G58930 | 32.584 | 178 | 103 | 7 | 17 | 185 | 2 | 171 | 5.58e-13 | 70.9 |
MS.gene34563.t1 | AT3G58930 | 32.584 | 178 | 103 | 7 | 17 | 185 | 2 | 171 | 5.58e-13 | 70.9 |
MS.gene34563.t1 | AT5G56570 | 21.957 | 460 | 291 | 17 | 1 | 434 | 22 | 439 | 5.67e-13 | 70.9 |
MS.gene34563.t1 | AT1G55660 | 28.400 | 250 | 136 | 12 | 17 | 240 | 53 | 285 | 6.59e-13 | 70.1 |
MS.gene34563.t1 | AT2G42730 | 24.783 | 460 | 285 | 20 | 17 | 431 | 5 | 448 | 6.66e-13 | 70.9 |
MS.gene34563.t1 | AT5G38590 | 27.650 | 217 | 115 | 9 | 17 | 209 | 2 | 200 | 8.44e-13 | 68.9 |
MS.gene34563.t1 | AT4G14096 | 29.242 | 277 | 145 | 11 | 17 | 264 | 8 | 262 | 9.79e-13 | 70.1 |
MS.gene34563.t1 | AT4G14096 | 29.242 | 277 | 145 | 11 | 17 | 264 | 8 | 262 | 9.79e-13 | 70.1 |
MS.gene34563.t1 | AT3G58900 | 28.000 | 275 | 156 | 10 | 17 | 264 | 2 | 261 | 1.59e-12 | 68.6 |
MS.gene34563.t1 | AT3G60040 | 29.643 | 280 | 157 | 14 | 17 | 264 | 13 | 284 | 1.60e-12 | 69.7 |
MS.gene34563.t1 | AT3G58900 | 28.000 | 275 | 156 | 10 | 17 | 264 | 2 | 261 | 1.81e-12 | 68.6 |
MS.gene34563.t1 | AT3G58900 | 28.000 | 275 | 156 | 10 | 17 | 264 | 2 | 261 | 1.81e-12 | 68.6 |
MS.gene34563.t1 | AT3G60040 | 29.643 | 280 | 157 | 14 | 17 | 264 | 232 | 503 | 2.13e-12 | 69.7 |
MS.gene34563.t1 | AT3G60040 | 29.643 | 280 | 157 | 14 | 17 | 264 | 230 | 501 | 2.39e-12 | 69.3 |
MS.gene34563.t1 | AT3G60040 | 29.643 | 280 | 157 | 14 | 17 | 264 | 233 | 504 | 2.54e-12 | 69.3 |
MS.gene34563.t1 | AT3G60040 | 29.643 | 280 | 157 | 14 | 17 | 264 | 232 | 503 | 2.56e-12 | 69.3 |
MS.gene34563.t1 | AT5G22700 | 23.223 | 422 | 243 | 15 | 3 | 376 | 29 | 417 | 3.81e-12 | 68.6 |
MS.gene34563.t1 | AT3G58900 | 28.364 | 275 | 155 | 11 | 17 | 264 | 2 | 261 | 5.93e-12 | 67.8 |
MS.gene34563.t1 | AT3G58940 | 27.419 | 372 | 193 | 18 | 17 | 345 | 2 | 339 | 6.12e-12 | 68.2 |
MS.gene34563.t1 | AT3G58940 | 27.419 | 372 | 193 | 18 | 17 | 345 | 2 | 339 | 6.12e-12 | 68.2 |
MS.gene34563.t1 | AT5G41630 | 27.056 | 377 | 210 | 16 | 17 | 341 | 12 | 375 | 6.61e-12 | 67.4 |
MS.gene34563.t1 | AT1G78840 | 22.707 | 458 | 287 | 14 | 14 | 431 | 2 | 432 | 7.30e-12 | 67.4 |
MS.gene34563.t1 | AT1G78840 | 22.707 | 458 | 287 | 14 | 14 | 431 | 2 | 432 | 7.30e-12 | 67.4 |
MS.gene34563.t1 | AT5G56410 | 25.221 | 452 | 261 | 22 | 17 | 419 | 2 | 425 | 1.09e-11 | 67.0 |
MS.gene34563.t1 | AT3G59000 | 30.126 | 239 | 125 | 10 | 17 | 240 | 2 | 213 | 1.34e-11 | 66.2 |
MS.gene34563.t1 | AT3G28410 | 25.387 | 323 | 177 | 16 | 17 | 307 | 28 | 318 | 1.36e-11 | 66.6 |
MS.gene34563.t1 | AT1G13570 | 23.556 | 450 | 275 | 15 | 14 | 433 | 3 | 413 | 1.83e-11 | 66.2 |
MS.gene34563.t1 | AT1G13570 | 23.556 | 450 | 275 | 15 | 14 | 433 | 3 | 413 | 1.83e-11 | 66.2 |
MS.gene34563.t1 | AT5G22700 | 23.171 | 410 | 234 | 15 | 15 | 376 | 4 | 380 | 2.08e-11 | 65.9 |
MS.gene34563.t1 | AT5G22700 | 23.171 | 410 | 234 | 15 | 15 | 376 | 4 | 380 | 2.08e-11 | 65.9 |
MS.gene34563.t1 | AT5G22700 | 23.171 | 410 | 234 | 15 | 15 | 376 | 4 | 380 | 2.08e-11 | 65.9 |
MS.gene34563.t1 | AT5G22700 | 23.171 | 410 | 234 | 15 | 15 | 376 | 4 | 380 | 2.08e-11 | 65.9 |
MS.gene34563.t1 | AT5G38396 | 28.826 | 281 | 149 | 13 | 17 | 264 | 2 | 264 | 2.30e-11 | 65.9 |
MS.gene34563.t1 | AT4G00320 | 26.525 | 377 | 228 | 14 | 6 | 341 | 2 | 370 | 3.40e-11 | 65.5 |
MS.gene34563.t1 | AT5G22730 | 28.682 | 258 | 130 | 11 | 16 | 239 | 27 | 264 | 4.18e-11 | 64.7 |
MS.gene34563.t1 | AT3G59230 | 28.522 | 291 | 141 | 13 | 17 | 264 | 12 | 278 | 5.66e-11 | 64.7 |
MS.gene34563.t1 | AT5G02700 | 25.625 | 320 | 179 | 15 | 17 | 307 | 27 | 316 | 7.92e-11 | 64.3 |
Find 87 sgRNAs with CRISPR-Local
Find 162 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTGAGTATGTTATGCAAAA+AGG | 0.247878 | 6.3:+53223138 | MS.gene34563:CDS |
AGTTGGGTTCGTGTCGTCAT+TGG | 0.303905 | 6.3:+53221029 | MS.gene34563:CDS |
AGATCCAGAACTTCGATGTT+TGG | 0.318126 | 6.3:-53222262 | None:intergenic |
CTCGCCGATGGCAACACCTT+TGG | 0.326594 | 6.3:+53220811 | MS.gene34563:CDS |
CTGCCCAAACATCGAAGTTC+TGG | 0.347616 | 6.3:+53222258 | MS.gene34563:CDS |
GCAAACATTGTCCGTGCTAT+TGG | 0.349235 | 6.3:-53222296 | None:intergenic |
TGTTGAGGAGCTTGAGTAAT+GGG | 0.353728 | 6.3:-53222513 | None:intergenic |
GCCTGAGTGAAACGAGGTTT+GGG | 0.354343 | 6.3:-53221151 | None:intergenic |
GATCCAGAACTTCGATGTTT+GGG | 0.361201 | 6.3:-53222261 | None:intergenic |
TGTGGAGCCCATCCTAAAAT+TGG | 0.362734 | 6.3:-53223030 | None:intergenic |
GCCAGTGGAAACAATTGTTT+TGG | 0.363656 | 6.3:-53220781 | None:intergenic |
TACGTAATCCCCGCGTCGTT+CGG | 0.379541 | 6.3:+53220940 | MS.gene34563:CDS |
TAAATTGTTGTCGTTGATAA+GGG | 0.382087 | 6.3:-53220988 | None:intergenic |
GTAAATTGTTGTCGTTGATA+AGG | 0.393847 | 6.3:-53220989 | None:intergenic |
TGCCTGAGTGAAACGAGGTT+TGG | 0.406372 | 6.3:-53221152 | None:intergenic |
GTTGGGTTCGTGTCGTCATT+GGG | 0.413997 | 6.3:+53221030 | MS.gene34563:CDS |
AAGCAAGCTGAGGAGAGAAT+TGG | 0.414523 | 6.3:-53222770 | None:intergenic |
GATTATTGCTGATATTTCCT+TGG | 0.424455 | 6.3:+53223179 | MS.gene34563:CDS |
AACTTGCGAGTCTACCTATA+CGG | 0.433159 | 6.3:-53220890 | None:intergenic |
AATTGACATCTTCGGTTATG+TGG | 0.433299 | 6.3:+53222204 | MS.gene34563:CDS |
AAACATCGCTGAATGTGTAT+TGG | 0.435155 | 6.3:-53222417 | None:intergenic |
TGCCCGTTCAGTTGACAGTT+GGG | 0.443838 | 6.3:+53221013 | MS.gene34563:CDS |
AACCCAACTGTCAACTGAAC+GGG | 0.451315 | 6.3:-53221015 | None:intergenic |
ATTTAGATCTCACTCTTCCC+TGG | 0.457886 | 6.3:+53222740 | MS.gene34563:CDS |
GCCTTCCACCTACCTTGAAA+AGG | 0.465640 | 6.3:+53222317 | MS.gene34563:CDS |
CGACACATTTCTGATGCTCT+TGG | 0.469372 | 6.3:-53223246 | None:intergenic |
TACCTATACGGTTAGCAGAT+TGG | 0.477461 | 6.3:-53220878 | None:intergenic |
TAAATTGAATAAAGGTAAGG+TGG | 0.483200 | 6.3:-53223080 | None:intergenic |
ACCAAAACAATTGTTTCCAC+TGG | 0.491092 | 6.3:+53220780 | MS.gene34563:CDS |
GTGCCCGTTCAGTTGACAGT+TGG | 0.498017 | 6.3:+53221012 | MS.gene34563:CDS |
AGCTCCTCAACAATCTCTCC+AGG | 0.498119 | 6.3:+53222524 | MS.gene34563:CDS |
CGGTTATGTGGAAGTGCCTA+TGG | 0.502768 | 6.3:+53222216 | MS.gene34563:CDS |
TACCAATCTGCTAACCGTAT+AGG | 0.513924 | 6.3:+53220876 | MS.gene34563:CDS |
GAATGTCGTACTTCATACCT+TGG | 0.514533 | 6.3:-53223203 | None:intergenic |
CTGGCTGTCTTTCTCGCCGA+TGG | 0.519124 | 6.3:+53220799 | MS.gene34563:CDS |
CGTCATTGGGCCTCACCTCA+AGG | 0.523497 | 6.3:+53221043 | MS.gene34563:CDS |
AAATTGAATAAAGGTAAGGT+GGG | 0.524970 | 6.3:-53223079 | None:intergenic |
CTCAGAGGAAGCTTGAAGTC+GGG | 0.527584 | 6.3:-53221116 | None:intergenic |
TTGTTGAGGAGCTTGAGTAA+TGG | 0.530004 | 6.3:-53222514 | None:intergenic |
GGTATGACAGGATGTGGTTG+AGG | 0.532367 | 6.3:-53220752 | None:intergenic |
ATCAAAATAGAGAATGAAGA+CGG | 0.536422 | 6.3:+53222346 | MS.gene34563:CDS |
TATACGGTTAGCAGATTGGT+AGG | 0.540234 | 6.3:-53220874 | None:intergenic |
GCTCAGAGGAAGCTTGAAGT+CGG | 0.541393 | 6.3:-53221117 | None:intergenic |
GGCGCATTTATTTCAAGCGA+AGG | 0.542343 | 6.3:-53222370 | None:intergenic |
CACTTAGGAGCACTAGGCTG+TGG | 0.544015 | 6.3:-53223048 | None:intergenic |
GCTGATATTTCCTTGGACCA+AGG | 0.544949 | 6.3:+53223186 | MS.gene34563:CDS |
ATGTGGTTGAGGACATCGTC+TGG | 0.546232 | 6.3:-53220741 | None:intergenic |
TTCGATGATGATGACGTCGA+TGG | 0.546235 | 6.3:+53221092 | MS.gene34563:CDS |
CGCATCTTCCGAACGACGCG+GGG | 0.555033 | 6.3:-53220948 | None:intergenic |
GTTTCCAAAGGTGTTGCCAT+CGG | 0.556729 | 6.3:-53220815 | None:intergenic |
ATACTGCTAATTGACATCTT+CGG | 0.557259 | 6.3:+53222196 | MS.gene34563:CDS |
TCTTAAAATTCGAAACGAGA+AGG | 0.560481 | 6.3:+53222816 | MS.gene34563:CDS |
TACGGTTAGCAGATTGGTAG+GGG | 0.562191 | 6.3:-53220872 | None:intergenic |
ACGCATCTTCCGAACGACGC+GGG | 0.563207 | 6.3:-53220949 | None:intergenic |
GCCCAAACCTCGTTTCACTC+AGG | 0.564786 | 6.3:+53221150 | MS.gene34563:CDS |
GAACCCAACTGTCAACTGAA+CGG | 0.574470 | 6.3:-53221016 | None:intergenic |
TCGGGAGGTATGACAGGATG+TGG | 0.575276 | 6.3:-53220758 | None:intergenic |
GACGTCATCATCATCGAAGA+CGG | 0.575327 | 6.3:-53221087 | None:intergenic |
ACGAGACACTTAGGAGCACT+AGG | 0.575659 | 6.3:-53223054 | None:intergenic |
AGGTGGGATACGAGACACTT+AGG | 0.576697 | 6.3:-53223063 | None:intergenic |
CGAGGTTTGGGCAAGTGAAG+AGG | 0.580117 | 6.3:-53221139 | None:intergenic |
CATCGGAAGAGAAAGATGAC+AGG | 0.581185 | 6.3:+53220706 | MS.gene34563:CDS |
TCAAAATAGAGAATGAAGAC+GGG | 0.581709 | 6.3:+53222347 | MS.gene34563:CDS |
GCGGACGAACAGTGGCTGCT+TGG | 0.585344 | 6.3:+53222673 | MS.gene34563:intron |
GAGAGAATTGGAGTTAAACC+AGG | 0.588263 | 6.3:-53222758 | None:intergenic |
ACGTCATCATCATCGAAGAC+GGG | 0.589288 | 6.3:-53221086 | None:intergenic |
ATACGGTTAGCAGATTGGTA+GGG | 0.592022 | 6.3:-53220873 | None:intergenic |
CATAGTAGTGCATTCACCAT+AGG | 0.595572 | 6.3:-53222232 | None:intergenic |
GTACTTCATACCTTGGTCCA+AGG | 0.607563 | 6.3:-53223196 | None:intergenic |
GGGCAAGTGAAGAGGCTCAG+AGG | 0.612863 | 6.3:-53221131 | None:intergenic |
CATCATCATCGAAGACGGGA+AGG | 0.613821 | 6.3:-53221082 | None:intergenic |
TTGTCCTGGAGAGATTGTTG+AGG | 0.613886 | 6.3:-53222528 | None:intergenic |
TTTGAGCGATTCAACAACCA+AGG | 0.621961 | 6.3:+53222561 | MS.gene34563:CDS |
TCGGCGAGAAAGACAGCCAG+TGG | 0.623218 | 6.3:-53220796 | None:intergenic |
AGGTCGAGTTCCTTGAGGTG+AGG | 0.625001 | 6.3:-53221053 | None:intergenic |
CGAAGACGGGAAGGAGATCG+AGG | 0.630663 | 6.3:-53221073 | None:intergenic |
GATCGAGGTCGAGTTCCTTG+AGG | 0.642609 | 6.3:-53221058 | None:intergenic |
CCACATGGAGATGTTTCCAA+AGG | 0.649931 | 6.3:-53220827 | None:intergenic |
GACATTTGTGAAGCAAGCTG+AGG | 0.652699 | 6.3:-53222780 | None:intergenic |
ATGGTGAATGCACTACTATG+TGG | 0.653386 | 6.3:+53222235 | MS.gene34563:CDS |
AGAGAATTGGAGTTAAACCA+GGG | 0.654053 | 6.3:-53222757 | None:intergenic |
GACGCATCTTCCGAACGACG+CGG | 0.678397 | 6.3:-53220950 | None:intergenic |
ACGACGAAATCATACGACAA+AGG | 0.683215 | 6.3:-53222490 | None:intergenic |
ATTCACAGAAATCTACCACA+TGG | 0.692434 | 6.3:-53220842 | None:intergenic |
GAACGACGCGGGGATTACGT+AGG | 0.692885 | 6.3:-53220938 | None:intergenic |
GCACGTGCCTGAGTGAAACG+AGG | 0.718712 | 6.3:-53221157 | None:intergenic |
CCTTTGGAAACATCTCCATG+TGG | 0.759947 | 6.3:+53220827 | MS.gene34563:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTAAATAATAAATGTTATTG+TGG | + | chr6.3:53221210-53221229 | MS.gene34563:intron | 10.0% |
!!! | ATTCAATTTAAAAATTTTCA+TGG | + | chr6.3:53223093-53223112 | MS.gene34563:CDS | 10.0% |
!!! | TTAAATCTATGAAACATTTT+TGG | + | chr6.3:53221991-53222010 | MS.gene34563:intron | 15.0% |
!!! | TTGATTTTGATTAAATTCAT+AGG | + | chr6.3:53221373-53221392 | MS.gene34563:intron | 15.0% |
!!! | TTTTAAATTGAATAAAGGTA+AGG | - | chr6.3:53223086-53223105 | None:intergenic | 15.0% |
!! | AAAAAAAAGAAGAAGAAGAT+TGG | - | chr6.3:53221265-53221284 | None:intergenic | 20.0% |
!! | AAAAAACTAGCAGTAAAAAA+TGG | - | chr6.3:53221185-53221204 | None:intergenic | 20.0% |
!! | ACTAAAATAAAACTTAACCT+TGG | - | chr6.3:53222581-53222600 | None:intergenic | 20.0% |
!! | GGAATTAAGTTACTAATTAT+TGG | - | chr6.3:53221865-53221884 | None:intergenic | 20.0% |
!!! | ATGTGTATTGGTAAATTTTA+AGG | - | chr6.3:53222408-53222427 | None:intergenic | 20.0% |
!!! | ATTTTAAGAACTTCAAGAAT+AGG | - | chr6.3:53222805-53222824 | None:intergenic | 20.0% |
!!! | TTAATCTTTTGTATAAACCT+TGG | + | chr6.3:53221615-53221634 | MS.gene34563:intron | 20.0% |
!!! | TTTTCAAAGTATCATGTAAT+TGG | - | chr6.3:53221886-53221905 | None:intergenic | 20.0% |
! | AAATTGAATAAAGGTAAGGT+GGG | - | chr6.3:53223082-53223101 | None:intergenic | 25.0% |
! | AGAAGAAGATAATTGTTGAA+TGG | + | chr6.3:53221809-53221828 | MS.gene34563:intron | 25.0% |
! | ATCAAAATAGAGAATGAAGA+CGG | + | chr6.3:53222346-53222365 | MS.gene34563:CDS | 25.0% |
! | ATTCTTGAAAAAGTAGATCA+CGG | - | chr6.3:53222705-53222724 | None:intergenic | 25.0% |
! | CTAATTAATACTTGACAATG+CGG | + | chr6.3:53222654-53222673 | MS.gene34563:intron | 25.0% |
! | TAAATTGAATAAAGGTAAGG+TGG | - | chr6.3:53223083-53223102 | None:intergenic | 25.0% |
! | TGATTTAGTGTGTAAATTGA+TGG | - | chr6.3:53221957-53221976 | None:intergenic | 25.0% |
! | TTGTGCATTTCAAATTACAA+CGG | + | chr6.3:53221405-53221424 | MS.gene34563:intron | 25.0% |
!! | TAAATTGTTGTCGTTGATAA+GGG | - | chr6.3:53220991-53221010 | None:intergenic | 25.0% |
!! | TAACTTTTTAACCAATAGCA+CGG | + | chr6.3:53222285-53222304 | MS.gene34563:CDS | 25.0% |
!!! | ACACACTAAATCACTTTTTT+GGG | + | chr6.3:53221964-53221983 | MS.gene34563:intron | 25.0% |
!!! | ATTTTAAGGTACTCAAGATT+TGG | - | chr6.3:53222394-53222413 | None:intergenic | 25.0% |
!!! | TACACACTAAATCACTTTTT+TGG | + | chr6.3:53221963-53221982 | MS.gene34563:intron | 25.0% |
!!! | TCAAAAGTCTTTTGGAAAAT+TGG | + | chr6.3:53221740-53221759 | MS.gene34563:intron | 25.0% |
AGAATCACATACCTGATTAA+CGG | + | chr6.3:53221646-53221665 | MS.gene34563:intron | 30.0% | |
ATACTGCTAATTGACATCTT+CGG | + | chr6.3:53222196-53222215 | MS.gene34563:CDS | 30.0% | |
ATCCACTAAAAAAACTTCAG+AGG | + | chr6.3:53221545-53221564 | MS.gene34563:intron | 30.0% | |
GATTATTGCTGATATTTCCT+TGG | + | chr6.3:53223179-53223198 | MS.gene34563:CDS | 30.0% | |
GTAAATTGTTGTCGTTGATA+AGG | - | chr6.3:53220992-53221011 | None:intergenic | 30.0% | |
GTTGAGTATGTTATGCAAAA+AGG | + | chr6.3:53223138-53223157 | MS.gene34563:CDS | 30.0% | |
TCAAAATAGAGAATGAAGAC+GGG | + | chr6.3:53222347-53222366 | MS.gene34563:CDS | 30.0% | |
TCTTAAAATTCGAAACGAGA+AGG | + | chr6.3:53222816-53222835 | MS.gene34563:CDS | 30.0% | |
TTCTTGAAAAAGTAGATCAC+GGG | - | chr6.3:53222704-53222723 | None:intergenic | 30.0% | |
TTGTGGAAAAGTTGAATCTT+TGG | + | chr6.3:53221227-53221246 | MS.gene34563:intron | 30.0% | |
!! | TATGTCATAGCTTTAAGTGT+TGG | - | chr6.3:53221297-53221316 | None:intergenic | 30.0% |
!! | TTTGATTTTCAGCCTTTTCA+AGG | - | chr6.3:53222332-53222351 | None:intergenic | 30.0% |
AAACATCGCTGAATGTGTAT+TGG | - | chr6.3:53222420-53222439 | None:intergenic | 35.0% | |
AATTGACATCTTCGGTTATG+TGG | + | chr6.3:53222204-53222223 | MS.gene34563:CDS | 35.0% | |
ACAACACGACATGAACATAT+TGG | - | chr6.3:53222020-53222039 | None:intergenic | 35.0% | |
ACCAAAACAATTGTTTCCAC+TGG | + | chr6.3:53220780-53220799 | MS.gene34563:CDS | 35.0% | |
AGAGAATTGGAGTTAAACCA+GGG | - | chr6.3:53222760-53222779 | None:intergenic | 35.0% | |
ATTAGCAGTATCTTCAGTGA+TGG | - | chr6.3:53222187-53222206 | None:intergenic | 35.0% | |
ATTCACAGAAATCTACCACA+TGG | - | chr6.3:53220845-53220864 | None:intergenic | 35.0% | |
GATTCAAGGCATATACACTT+TGG | - | chr6.3:53222052-53222071 | None:intergenic | 35.0% | |
TCTTGAAAAAGTAGATCACG+GGG | - | chr6.3:53222703-53222722 | None:intergenic | 35.0% | |
TGTGATTCTATGTATAGCCA+AGG | - | chr6.3:53221635-53221654 | None:intergenic | 35.0% | |
TTCGTAAAAGATGTCTTGCA+GGG | + | chr6.3:53221521-53221540 | MS.gene34563:intron | 35.0% | |
! | CAAAACTAGATGTTTTGTCC+TGG | - | chr6.3:53222545-53222564 | None:intergenic | 35.0% |
! | CTCAAAACGACAAAAAGCAT+CGG | + | chr6.3:53220689-53220708 | MS.gene34563:CDS | 35.0% |
! | GCACTGATACATAAGATTCA+AGG | - | chr6.3:53222066-53222085 | None:intergenic | 35.0% |
! | TGTGTAAATTGATGGCATGT+TGG | - | chr6.3:53221949-53221968 | None:intergenic | 35.0% |
!! | AACAGTCACCAATTTTAGGA+TGG | + | chr6.3:53223022-53223041 | MS.gene34563:CDS | 35.0% |
!! | ATTTTCAGCCTTTTCAAGGT+AGG | - | chr6.3:53222328-53222347 | None:intergenic | 35.0% |
!!! | ACAGTCACCAATTTTAGGAT+GGG | + | chr6.3:53223023-53223042 | MS.gene34563:CDS | 35.0% |
!!! | AGCCTCTGAAGTTTTTTTAG+TGG | - | chr6.3:53221550-53221569 | None:intergenic | 35.0% |
!!! | GTGGAAACAATTGTTTTGGT+CGG | - | chr6.3:53220780-53220799 | None:intergenic | 35.0% |
!!! | TGGAAACAATTGTTTTGGTC+GGG | - | chr6.3:53220779-53220798 | None:intergenic | 35.0% |
AACGAGGATGTATTGAGTCA+AGG | - | chr6.3:53221447-53221466 | None:intergenic | 40.0% | |
AACTTGCGAGTCTACCTATA+CGG | - | chr6.3:53220893-53220912 | None:intergenic | 40.0% | |
ACGACGAAATCATACGACAA+AGG | - | chr6.3:53222493-53222512 | None:intergenic | 40.0% | |
AGATCCAGAACTTCGATGTT+TGG | - | chr6.3:53222265-53222284 | None:intergenic | 40.0% | |
AGATTCTCTAGCCGTTAATC+AGG | - | chr6.3:53221660-53221679 | None:intergenic | 40.0% | |
ATACGGTTAGCAGATTGGTA+GGG | - | chr6.3:53220876-53220895 | None:intergenic | 40.0% | |
ATGGTGAATGCACTACTATG+TGG | + | chr6.3:53222235-53222254 | MS.gene34563:CDS | 40.0% | |
ATGTAAACTTGTCCACACCA+AGG | + | chr6.3:53221692-53221711 | MS.gene34563:intron | 40.0% | |
ATTTAGATCTCACTCTTCCC+TGG | + | chr6.3:53222740-53222759 | MS.gene34563:CDS | 40.0% | |
CATAGTAGTGCATTCACCAT+AGG | - | chr6.3:53222235-53222254 | None:intergenic | 40.0% | |
GAATGTCGTACTTCATACCT+TGG | - | chr6.3:53223206-53223225 | None:intergenic | 40.0% | |
GAATTCCATTGCTAAGACTG+TGG | - | chr6.3:53222129-53222148 | None:intergenic | 40.0% | |
GAGAGAATTGGAGTTAAACC+AGG | - | chr6.3:53222761-53222780 | None:intergenic | 40.0% | |
GATCCAGAACTTCGATGTTT+GGG | - | chr6.3:53222264-53222283 | None:intergenic | 40.0% | |
GGAAGTTGAATATGCTACAG+AGG | + | chr6.3:53221761-53221780 | MS.gene34563:intron | 40.0% | |
GTCTTGAAGGAGACAAATGA+GGG | + | chr6.3:53221715-53221734 | MS.gene34563:intron | 40.0% | |
GTTCGTAAAAGATGTCTTGC+AGG | + | chr6.3:53221520-53221539 | MS.gene34563:intron | 40.0% | |
TACCAATCTGCTAACCGTAT+AGG | + | chr6.3:53220876-53220895 | MS.gene34563:CDS | 40.0% | |
TACCTATACGGTTAGCAGAT+TGG | - | chr6.3:53220881-53220900 | None:intergenic | 40.0% | |
TATACGGTTAGCAGATTGGT+AGG | - | chr6.3:53220877-53220896 | None:intergenic | 40.0% | |
TCTGTGTCGTGACAAACAAT+AGG | + | chr6.3:53221481-53221500 | MS.gene34563:intron | 40.0% | |
TGTAAACTTGTCCACACCAA+GGG | + | chr6.3:53221693-53221712 | MS.gene34563:intron | 40.0% | |
TGTTGAGGAGCTTGAGTAAT+GGG | - | chr6.3:53222516-53222535 | None:intergenic | 40.0% | |
TTGACTCAATACATCCTCGT+TGG | + | chr6.3:53221446-53221465 | MS.gene34563:intron | 40.0% | |
TTGTTCCACAGTCTTAGCAA+TGG | + | chr6.3:53222121-53222140 | MS.gene34563:intron | 40.0% | |
TTGTTGAGGAGCTTGAGTAA+TGG | - | chr6.3:53222517-53222536 | None:intergenic | 40.0% | |
TTTGAGCGATTCAACAACCA+AGG | + | chr6.3:53222561-53222580 | MS.gene34563:CDS | 40.0% | |
! | AAATTGGTGACTGTTCCTGT+AGG | - | chr6.3:53223017-53223036 | None:intergenic | 40.0% |
! | CAAATCCTTTTGTTGCCTAC+AGG | + | chr6.3:53222999-53223018 | MS.gene34563:intron | 40.0% |
! | CAGGAACAGTCACCAATTTT+AGG | + | chr6.3:53223018-53223037 | MS.gene34563:intron | 40.0% |
! | GCCAGTGGAAACAATTGTTT+TGG | - | chr6.3:53220784-53220803 | None:intergenic | 40.0% |
!! | ACATCCTCGTTGGTAATGAT+AGG | + | chr6.3:53221456-53221475 | MS.gene34563:intron | 40.0% |
!!! | AAACAATTGTTTTGGTCGGG+AGG | - | chr6.3:53220776-53220795 | None:intergenic | 40.0% |
!!! | TGAGGGCATCAAAAGTCTTT+TGG | + | chr6.3:53221732-53221751 | MS.gene34563:intron | 40.0% |
AACCCAACTGTCAACTGAAC+GGG | - | chr6.3:53221018-53221037 | None:intergenic | 45.0% | |
AAGCAAGCTGAGGAGAGAAT+TGG | - | chr6.3:53222773-53222792 | None:intergenic | 45.0% | |
ACGTCATCATCATCGAAGAC+GGG | - | chr6.3:53221089-53221108 | None:intergenic | 45.0% | |
AGAAGAAGATTGGAGCGATG+AGG | - | chr6.3:53221255-53221274 | None:intergenic | 45.0% | |
CATCGGAAGAGAAAGATGAC+AGG | + | chr6.3:53220706-53220725 | MS.gene34563:CDS | 45.0% | |
CCACATGGAGATGTTTCCAA+AGG | - | chr6.3:53220830-53220849 | None:intergenic | 45.0% | |
CGACACATTTCTGATGCTCT+TGG | - | chr6.3:53223249-53223268 | None:intergenic | 45.0% | |
CTGTTCCTGTAGGCAACAAA+AGG | - | chr6.3:53223007-53223026 | None:intergenic | 45.0% | |
GAACCCAACTGTCAACTGAA+CGG | - | chr6.3:53221019-53221038 | None:intergenic | 45.0% | |
GAAGCCTATCATTACCAACG+AGG | - | chr6.3:53221463-53221482 | None:intergenic | 45.0% | |
GACATTTGTGAAGCAAGCTG+AGG | - | chr6.3:53222783-53222802 | None:intergenic | 45.0% | |
GACGTCATCATCATCGAAGA+CGG | - | chr6.3:53221090-53221109 | None:intergenic | 45.0% | |
GCAAACATTGTCCGTGCTAT+TGG | - | chr6.3:53222299-53222318 | None:intergenic | 45.0% | |
GCTGATATTTCCTTGGACCA+AGG | + | chr6.3:53223186-53223205 | MS.gene34563:CDS | 45.0% | |
GGCGCATTTATTTCAAGCGA+AGG | - | chr6.3:53222373-53222392 | None:intergenic | 45.0% | |
GGTCTTGAAGGAGACAAATG+AGG | + | chr6.3:53221714-53221733 | MS.gene34563:intron | 45.0% | |
GTACTTCATACCTTGGTCCA+AGG | - | chr6.3:53223199-53223218 | None:intergenic | 45.0% | |
TACGGTTAGCAGATTGGTAG+GGG | - | chr6.3:53220875-53220894 | None:intergenic | 45.0% | |
TGTGGAGCCCATCCTAAAAT+TGG | - | chr6.3:53223033-53223052 | None:intergenic | 45.0% | |
TTGTCCTGGAGAGATTGTTG+AGG | - | chr6.3:53222531-53222550 | None:intergenic | 45.0% | |
TTTGTCTCCTTCAAGACCCT+TGG | - | chr6.3:53221712-53221731 | None:intergenic | 45.0% | |
! | CCTTTGGAAACATCTCCATG+TGG | + | chr6.3:53220827-53220846 | MS.gene34563:CDS | 45.0% |
! | GTTCATGTCGTGTTGTTGTC+TGG | + | chr6.3:53222024-53222043 | MS.gene34563:intron | 45.0% |
! | TTCGATGATGATGACGTCGA+TGG | + | chr6.3:53221092-53221111 | MS.gene34563:CDS | 45.0% |
!! | GTTTCCAAAGGTGTTGCCAT+CGG | - | chr6.3:53220818-53220837 | None:intergenic | 45.0% |
!! | TTCAGCCTTTTCAAGGTAGG+TGG | - | chr6.3:53222325-53222344 | None:intergenic | 45.0% |
!!! | AAAATTTTTAAATTGAATAA+AGG | - | chr6.3:53223091-53223110 | None:intergenic | 5.0% |
AGCTCCTCAACAATCTCTCC+AGG | + | chr6.3:53222524-53222543 | MS.gene34563:CDS | 50.0% | |
AGGTGGGATACGAGACACTT+AGG | - | chr6.3:53223066-53223085 | None:intergenic | 50.0% | |
AGTTGGGTTCGTGTCGTCAT+TGG | + | chr6.3:53221029-53221048 | MS.gene34563:CDS | 50.0% | |
ATGTGGTTGAGGACATCGTC+TGG | - | chr6.3:53220744-53220763 | None:intergenic | 50.0% | |
CATCATCATCGAAGACGGGA+AGG | - | chr6.3:53221085-53221104 | None:intergenic | 50.0% | |
CTCAGAGGAAGCTTGAAGTC+GGG | - | chr6.3:53221119-53221138 | None:intergenic | 50.0% | |
CTGCCCAAACATCGAAGTTC+TGG | + | chr6.3:53222258-53222277 | MS.gene34563:CDS | 50.0% | |
GCCTGAGTGAAACGAGGTTT+GGG | - | chr6.3:53221154-53221173 | None:intergenic | 50.0% | |
GCCTTCCACCTACCTTGAAA+AGG | + | chr6.3:53222317-53222336 | MS.gene34563:CDS | 50.0% | |
GCTCAGAGGAAGCTTGAAGT+CGG | - | chr6.3:53221120-53221139 | None:intergenic | 50.0% | |
GGTATGACAGGATGTGGTTG+AGG | - | chr6.3:53220755-53220774 | None:intergenic | 50.0% | |
GTTGGGTTCGTGTCGTCATT+GGG | + | chr6.3:53221030-53221049 | MS.gene34563:CDS | 50.0% | |
TGCCCGTTCAGTTGACAGTT+GGG | + | chr6.3:53221013-53221032 | MS.gene34563:CDS | 50.0% | |
TGCCTGAGTGAAACGAGGTT+TGG | - | chr6.3:53221155-53221174 | None:intergenic | 50.0% | |
TTGACAATGCGGACGAACAG+TGG | + | chr6.3:53222665-53222684 | MS.gene34563:intron | 50.0% | |
!! | ACGAGACACTTAGGAGCACT+AGG | - | chr6.3:53223057-53223076 | None:intergenic | 50.0% |
!! | CGGTTATGTGGAAGTGCCTA+TGG | + | chr6.3:53222216-53222235 | MS.gene34563:CDS | 50.0% |
!! | GCCTTTTCAAGGTAGGTGGA+AGG | - | chr6.3:53222321-53222340 | None:intergenic | 50.0% |
!! | TTTTGGTCGGGAGGTATGAC+AGG | - | chr6.3:53220767-53220786 | None:intergenic | 50.0% |
AGGTCGAGTTCCTTGAGGTG+AGG | - | chr6.3:53221056-53221075 | None:intergenic | 55.0% | |
CGAGGTTTGGGCAAGTGAAG+AGG | - | chr6.3:53221142-53221161 | None:intergenic | 55.0% | |
CTCCTTCAAGACCCTTGGTG+TGG | - | chr6.3:53221707-53221726 | None:intergenic | 55.0% | |
GATCGAGGTCGAGTTCCTTG+AGG | - | chr6.3:53221061-53221080 | None:intergenic | 55.0% | |
GCCCAAACCTCGTTTCACTC+AGG | + | chr6.3:53221150-53221169 | MS.gene34563:CDS | 55.0% | |
GTCCACACCAAGGGTCTTGA+AGG | + | chr6.3:53221702-53221721 | MS.gene34563:intron | 55.0% | |
GTGCCCGTTCAGTTGACAGT+TGG | + | chr6.3:53221012-53221031 | MS.gene34563:CDS | 55.0% | |
TACGTAATCCCCGCGTCGTT+CGG | + | chr6.3:53220940-53220959 | MS.gene34563:CDS | 55.0% | |
! | TCGGGAGGTATGACAGGATG+TGG | - | chr6.3:53220761-53220780 | None:intergenic | 55.0% |
!! | CACTTAGGAGCACTAGGCTG+TGG | - | chr6.3:53223051-53223070 | None:intergenic | 55.0% |
ACGCATCTTCCGAACGACGC+GGG | - | chr6.3:53220952-53220971 | None:intergenic | 60.0% | |
CGAAGACGGGAAGGAGATCG+AGG | - | chr6.3:53221076-53221095 | None:intergenic | 60.0% | |
CGTCATTGGGCCTCACCTCA+AGG | + | chr6.3:53221043-53221062 | MS.gene34563:CDS | 60.0% | |
CTCGCCGATGGCAACACCTT+TGG | + | chr6.3:53220811-53220830 | MS.gene34563:CDS | 60.0% | |
CTGGCTGTCTTTCTCGCCGA+TGG | + | chr6.3:53220799-53220818 | MS.gene34563:CDS | 60.0% | |
GAACGACGCGGGGATTACGT+AGG | - | chr6.3:53220941-53220960 | None:intergenic | 60.0% | |
GACGCATCTTCCGAACGACG+CGG | - | chr6.3:53220953-53220972 | None:intergenic | 60.0% | |
GCACGTGCCTGAGTGAAACG+AGG | - | chr6.3:53221160-53221179 | None:intergenic | 60.0% | |
GGGCAAGTGAAGAGGCTCAG+AGG | - | chr6.3:53221134-53221153 | None:intergenic | 60.0% | |
TCGGCGAGAAAGACAGCCAG+TGG | - | chr6.3:53220799-53220818 | None:intergenic | 60.0% | |
CGCATCTTCCGAACGACGCG+GGG | - | chr6.3:53220951-53220970 | None:intergenic | 65.0% | |
GCGGACGAACAGTGGCTGCT+TGG | + | chr6.3:53222673-53222692 | MS.gene34563:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.3 | gene | 53220675 | 53223284 | 53220675 | ID=MS.gene34563 |
chr6.3 | mRNA | 53220675 | 53223284 | 53220675 | ID=MS.gene34563.t1;Parent=MS.gene34563 |
chr6.3 | exon | 53220675 | 53221175 | 53220675 | ID=MS.gene34563.t1.exon1;Parent=MS.gene34563.t1 |
chr6.3 | CDS | 53220675 | 53221175 | 53220675 | ID=cds.MS.gene34563.t1;Parent=MS.gene34563.t1 |
chr6.3 | exon | 53222196 | 53222582 | 53222196 | ID=MS.gene34563.t1.exon2;Parent=MS.gene34563.t1 |
chr6.3 | CDS | 53222196 | 53222582 | 53222196 | ID=cds.MS.gene34563.t1;Parent=MS.gene34563.t1 |
chr6.3 | exon | 53222685 | 53222837 | 53222685 | ID=MS.gene34563.t1.exon3;Parent=MS.gene34563.t1 |
chr6.3 | CDS | 53222685 | 53222837 | 53222685 | ID=cds.MS.gene34563.t1;Parent=MS.gene34563.t1 |
chr6.3 | exon | 53223021 | 53223284 | 53223021 | ID=MS.gene34563.t1.exon4;Parent=MS.gene34563.t1 |
chr6.3 | CDS | 53223021 | 53223284 | 53223021 | ID=cds.MS.gene34563.t1;Parent=MS.gene34563.t1 |
Gene Sequence |
Protein sequence |