AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene34563


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34563.t1 MTR_8g014260 67.974 459 114 7 1 434 1 451 0.0 583
MS.gene34563.t1 MTR_4g024710 83.813 278 43 2 158 434 71 347 3.69e-163 463
MS.gene34563.t1 MTR_4g024745 85.496 262 36 2 157 417 24 284 1.01e-149 426
MS.gene34563.t1 MTR_8g445780 57.598 408 135 6 1 388 1 390 7.96e-145 418
MS.gene34563.t1 MTR_8g077460 47.140 437 166 12 1 434 1 375 6.89e-110 328
MS.gene34563.t1 MTR_5g092960 43.129 473 213 16 1 433 5 461 3.57e-99 304
MS.gene34563.t1 MTR_8g014210 63.913 230 83 0 205 434 2 231 1.13e-94 285
MS.gene34563.t1 MTR_8g468810 41.474 475 225 16 1 434 1 463 2.98e-94 291
MS.gene34563.t1 MTR_8g062270 41.921 458 205 13 17 433 16 453 5.99e-92 285
MS.gene34563.t1 MTR_2g083840 42.174 460 221 16 7 434 11 457 8.18e-91 283
MS.gene34563.t1 MTR_8g058970 41.393 488 221 19 1 434 1 477 4.43e-89 279
MS.gene34563.t1 MTR_8g468840 41.342 462 224 15 1 431 2 447 1.59e-85 269
MS.gene34563.t1 MTR_8g014160 40.044 452 180 13 12 434 36 425 1.92e-85 268
MS.gene34563.t1 MTR_8g467800 40.042 472 221 15 5 434 2 453 1.93e-84 266
MS.gene34563.t1 MTR_4g032730 38.144 485 229 18 1 433 1 466 1.09e-77 249
MS.gene34563.t1 MTR_8g468760 39.121 455 200 16 14 433 6 418 1.68e-73 236
MS.gene34563.t1 MTR_4g024720 62.802 207 56 4 1 193 1 200 2.50e-73 229
MS.gene34563.t1 MTR_8g058965 38.248 468 232 15 11 434 2 456 8.73e-73 236
MS.gene34563.t1 MTR_8g469020 37.061 456 238 13 17 434 7 451 3.00e-72 234
MS.gene34563.t1 MTR_8g070950 39.525 463 222 19 1 434 1 434 2.12e-71 232
MS.gene34563.t1 MTR_8g468810 41.361 382 178 13 1 347 1 371 2.60e-68 222
MS.gene34563.t1 MTR_5g092960 41.470 381 175 13 1 347 5 371 5.02e-67 219
MS.gene34563.t1 MTR_8g062010 35.762 453 240 18 8 434 3 430 4.32e-66 218
MS.gene34563.t1 MTR_8g062310 37.360 447 208 18 17 434 25 428 3.02e-65 216
MS.gene34563.t1 MTR_8g062080 34.624 465 243 18 5 434 7 445 2.17e-62 208
MS.gene34563.t1 MTR_8g468810 40.118 339 160 10 1 310 1 325 1.96e-59 197
MS.gene34563.t1 MTR_8g468810 41.066 319 149 9 1 290 1 309 3.87e-59 196
MS.gene34563.t1 MTR_8g468810 41.066 319 149 9 1 290 1 309 1.01e-58 196
MS.gene34563.t1 MTR_4g050250 36.706 425 213 16 3 380 4 419 3.03e-54 186
MS.gene34563.t1 MTR_5g021550 55.952 168 58 6 5 165 4 162 1.31e-50 169
MS.gene34563.t1 MTR_8g062300 31.138 501 254 18 1 434 1 477 3.15e-46 166
MS.gene34563.t1 MTR_8g467800 40.308 325 144 12 5 296 2 309 7.96e-46 162
MS.gene34563.t1 MTR_8g014290 50.932 161 66 4 12 165 5 159 2.81e-39 139
MS.gene34563.t1 MTR_5g084070 30.837 454 247 17 6 427 2 420 1.12e-37 142
MS.gene34563.t1 MTR_4g024770 92.063 63 5 0 1 63 8 70 7.52e-35 124
MS.gene34563.t1 MTR_8g467790 31.078 399 207 18 17 389 148 504 1.21e-34 135
MS.gene34563.t1 MTR_2g086020 31.328 399 178 15 45 434 4 315 1.49e-34 131
MS.gene34563.t1 MTR_1g041245 27.356 435 240 15 17 434 11 386 6.65e-31 122
MS.gene34563.t1 MTR_5g008950 25.909 440 227 13 19 434 1 365 1.06e-29 119
MS.gene34563.t1 MTR_8g014230 63.291 79 29 0 346 424 17 95 5.11e-28 107
MS.gene34563.t1 MTR_5g080710 27.983 461 264 18 9 433 25 453 8.18e-28 115
MS.gene34563.t1 MTR_8g014220 35.211 213 61 6 1 190 1 159 6.34e-27 106
MS.gene34563.t1 MTR_8g014180 81.818 55 10 0 1 55 1 55 3.56e-25 97.8
MS.gene34563.t1 MTR_6g040270 26.591 440 239 20 15 432 2 379 6.47e-25 105
MS.gene34563.t1 MTR_7g032380 23.653 427 236 14 17 434 11 356 7.89e-25 105
MS.gene34563.t1 MTR_1089s0010 26.027 438 244 17 14 434 5 379 2.58e-24 103
MS.gene34563.t1 MTR_7g056433 27.523 436 250 17 12 434 7 389 6.19e-24 103
MS.gene34563.t1 MTR_7g098510 26.126 444 262 16 2 434 3 391 4.67e-22 97.8
MS.gene34563.t1 MTR_4g056040 28.078 463 252 16 11 409 3 448 7.64e-22 98.2
MS.gene34563.t1 MTR_3g082890 26.582 474 238 18 1 434 81 484 4.34e-21 95.9
MS.gene34563.t1 MTR_4g056030 27.211 441 240 16 11 402 3 411 3.59e-20 92.8
MS.gene34563.t1 MTR_7g032370 25.362 414 238 16 29 434 2 352 9.12e-20 90.5
MS.gene34563.t1 MTR_7g034115 26.950 423 242 17 17 428 11 377 1.27e-19 90.5
MS.gene34563.t1 MTR_4g056070 27.494 451 236 16 11 387 3 436 2.63e-19 90.1
MS.gene34563.t1 MTR_5g008920 23.725 451 250 14 7 434 2 381 7.14e-19 88.2
MS.gene34563.t1 MTR_3g105060 26.005 423 245 18 17 434 14 373 1.05e-18 87.8
MS.gene34563.t1 MTR_4g080787 26.744 430 256 16 16 402 18 431 2.00e-18 87.8
MS.gene34563.t1 MTR_4g098590 28.960 404 217 17 19 402 1 354 3.94e-18 85.9
MS.gene34563.t1 MTR_7g115270 24.706 425 275 17 16 431 11 399 6.09e-18 85.5
MS.gene34563.t1 MTR_4g056020 26.932 427 239 16 11 392 3 401 6.42e-18 85.9
MS.gene34563.t1 MTR_3g107120 25.612 449 237 16 17 434 9 391 7.56e-18 85.5
MS.gene34563.t1 MTR_7g026500 26.879 439 241 18 17 433 14 394 1.09e-17 85.1
MS.gene34563.t1 MTR_6g044572 26.991 452 231 22 17 434 2 388 1.54e-17 84.3
MS.gene34563.t1 MTR_1g038710 28.764 445 252 19 2 402 4 427 2.65e-17 84.3
MS.gene34563.t1 MTR_1g107385 27.533 454 254 21 2 432 20 421 4.40e-17 83.2
MS.gene34563.t1 MTR_1g016340 25.223 448 284 17 7 426 4 428 5.83e-17 83.2
MS.gene34563.t1 MTR_1g016340 25.223 448 284 17 7 426 9 433 7.77e-17 82.8
MS.gene34563.t1 MTR_6g044560 26.797 459 237 22 10 434 171 564 9.24e-17 82.8
MS.gene34563.t1 MTR_5g073420 25.688 436 240 16 17 434 11 380 2.17e-16 80.9
MS.gene34563.t1 MTR_7g056420 26.014 419 233 16 16 426 8 357 2.17e-16 82.4
MS.gene34563.t1 MTR_7g055943 24.661 442 249 16 17 434 40 421 2.31e-16 81.3
MS.gene34563.t1 MTR_4g055990 26.625 477 247 18 11 406 3 457 2.68e-16 81.3
MS.gene34563.t1 MTR_7g056430 26.014 419 233 16 16 426 8 357 3.09e-16 81.6
MS.gene34563.t1 MTR_4g055990 26.625 477 247 18 11 406 3 457 3.16e-16 80.9
MS.gene34563.t1 MTR_3g087260 25.720 486 255 17 15 433 10 456 5.76e-16 80.1
MS.gene34563.t1 MTR_2g082800 26.392 413 254 17 6 393 17 404 7.45e-16 79.3
MS.gene34563.t1 MTR_3g448340 25.917 436 258 17 17 402 6 426 8.19e-16 79.7
MS.gene34563.t1 MTR_4g113810 34.286 175 87 5 98 251 1 168 9.10e-16 75.1
MS.gene34563.t1 MTR_2g072720 26.222 450 238 17 5 398 27 438 1.65e-15 79.0
MS.gene34563.t1 MTR_2g007450 35.196 179 98 6 11 179 10 180 2.15e-15 78.2
MS.gene34563.t1 MTR_1g108820 26.622 447 227 22 17 432 8 384 4.85e-15 76.6
MS.gene34563.t1 MTR_5g045170 25.057 435 244 19 19 432 16 389 1.15e-14 75.9
MS.gene34563.t1 MTR_1g115250 25.054 463 252 19 2 418 18 431 1.55e-14 75.5
MS.gene34563.t1 MTR_1g021820 28.626 262 151 11 11 264 22 255 1.78e-14 75.5
MS.gene34563.t1 MTR_7g083740 27.907 215 118 6 7 209 3 192 2.14e-14 74.7
MS.gene34563.t1 MTR_2g007500 27.919 394 204 15 7 382 4 335 2.61e-14 73.9
MS.gene34563.t1 MTR_1g021825 24.413 426 268 15 1 402 1 396 4.53e-14 73.9
MS.gene34563.t1 MTR_2g005990 23.918 439 260 19 17 432 6 393 5.04e-14 73.9
MS.gene34563.t1 MTR_1g014450 24.670 454 283 23 4 428 3 426 5.77e-14 73.9
MS.gene34563.t1 MTR_1g016310 26.642 274 171 11 1 264 3 256 7.58e-14 72.8
MS.gene34563.t1 MTR_0009s0080 24.940 417 236 16 6 402 8 367 8.54e-14 73.2
MS.gene34563.t1 MTR_3g071850 25.231 432 247 17 17 426 24 401 1.33e-13 73.6
MS.gene34563.t1 MTR_3g107100 30.392 204 109 7 11 196 5 193 1.40e-13 72.4
MS.gene34563.t1 MTR_3g107160 28.910 211 114 7 11 200 4 199 1.69e-13 72.0
MS.gene34563.t1 MTR_1g016310 26.642 274 171 11 1 264 3 256 1.99e-13 72.0
MS.gene34563.t1 MTR_2g007360 25.000 448 235 17 8 432 3 372 2.23e-13 71.6
MS.gene34563.t1 MTR_1g021825 23.821 424 269 14 3 402 74 467 2.31e-13 72.0
MS.gene34563.t1 MTR_2g008320 24.722 449 250 18 9 434 44 427 4.61e-13 71.2
MS.gene34563.t1 MTR_3g114200 30.814 172 98 4 4 171 2 156 5.28e-13 67.0
MS.gene34563.t1 MTR_3g099830 24.434 442 227 18 17 432 12 372 5.65e-13 70.5
MS.gene34563.t1 MTR_2g047872 24.512 461 288 21 3 434 7 436 5.73e-13 70.9
MS.gene34563.t1 MTR_8g085430 28.054 221 111 7 17 208 11 212 5.74e-13 70.1
MS.gene34563.t1 MTR_2g047858 29.520 271 147 14 13 271 111 349 7.06e-13 70.9
MS.gene34563.t1 MTR_7g007080 28.470 281 153 10 15 263 2 266 1.13e-12 69.7
MS.gene34563.t1 MTR_4g055580 25.478 471 246 17 11 402 94 538 1.96e-12 69.3
MS.gene34563.t1 MTR_3g026920 26.058 449 245 19 11 431 13 402 2.23e-12 68.9
MS.gene34563.t1 MTR_4g092430 41.111 90 41 2 3 88 25 106 2.23e-12 68.9
MS.gene34563.t1 MTR_4g092430 41.111 90 41 2 3 88 25 106 2.55e-12 68.9
MS.gene34563.t1 MTR_2g007550 31.551 187 95 7 1 180 1 161 3.10e-12 67.8
MS.gene34563.t1 MTR_5g083890 25.367 477 213 21 13 428 2 396 5.74e-12 67.8
MS.gene34563.t1 MTR_3g113782 40.625 64 38 0 1 64 1 64 6.54e-12 61.6
MS.gene34563.t1 MTR_7g033990 37.500 120 65 3 17 134 11 122 8.72e-12 67.0
MS.gene34563.t1 MTR_4g051640 36.364 88 48 1 1 88 14 93 1.52e-11 62.8
MS.gene34563.t1 MTR_1g011430 27.801 241 129 9 12 240 2 209 1.77e-11 65.9
MS.gene34563.t1 MTR_1g115245 28.421 190 107 7 2 175 12 188 2.19e-11 65.1
MS.gene34563.t1 MTR_7g056447 28.042 189 106 7 12 198 4 164 5.25e-11 63.5
MS.gene34563.t1 MTR_0049s0110 21.333 450 281 14 17 433 8 417 5.52e-11 64.7
MS.gene34563.t1 MTR_3g048290 25.918 463 276 17 17 433 23 464 5.91e-11 64.7
MS.gene34563.t1 MTR_2g047848 23.144 458 280 22 12 433 2 423 6.16e-11 64.3
MS.gene34563.t1 MTR_3g023470 30.247 162 88 6 7 166 5 143 7.08e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34563.t1 AT4G26340 29.176 449 256 15 17 434 2 419 5.35e-37 140
MS.gene34563.t1 AT5G56370 27.790 457 252 17 17 433 2 420 1.07e-29 120
MS.gene34563.t1 AT5G56370 27.790 457 252 17 17 433 2 420 1.07e-29 120
MS.gene34563.t1 AT5G56420 26.667 450 265 18 17 434 6 422 3.11e-28 115
MS.gene34563.t1 AT5G56420 26.667 450 265 18 17 434 6 422 3.11e-28 115
MS.gene34563.t1 AT5G56420 26.667 450 265 18 17 434 6 422 3.11e-28 115
MS.gene34563.t1 AT3G52680 28.178 472 267 18 1 433 6 444 4.79e-28 115
MS.gene34563.t1 AT4G26350 25.926 459 267 16 17 434 2 428 1.81e-26 110
MS.gene34563.t1 AT5G53840 26.752 471 250 20 10 431 13 437 2.03e-26 111
MS.gene34563.t1 AT5G56440 26.923 468 251 19 17 433 2 429 1.13e-25 108
MS.gene34563.t1 AT4G00160 27.637 474 269 19 1 433 1 441 1.37e-25 108
MS.gene34563.t1 AT5G38570 26.588 425 253 17 17 433 2 375 1.47e-25 107
MS.gene34563.t1 AT5G38590 27.014 422 237 17 17 404 2 386 1.73e-24 105
MS.gene34563.t1 AT2G26860 29.561 433 228 19 17 406 2 400 4.15e-24 103
MS.gene34563.t1 AT2G26860 29.561 433 228 19 17 406 2 400 4.15e-24 103
MS.gene34563.t1 AT1G32375 25.664 452 271 16 17 434 2 422 7.65e-24 103
MS.gene34563.t1 AT1G32375 25.664 452 271 16 17 434 2 422 7.65e-24 103
MS.gene34563.t1 AT3G49030 28.194 454 259 21 15 433 19 440 9.87e-24 103
MS.gene34563.t1 AT4G10400 26.058 449 260 17 17 434 2 409 2.79e-23 101
MS.gene34563.t1 AT4G10400 26.058 449 260 17 17 434 2 409 2.79e-23 101
MS.gene34563.t1 AT4G10400 26.058 449 260 17 17 434 2 409 2.79e-23 101
MS.gene34563.t1 AT4G13965 27.703 444 259 18 17 431 10 420 3.25e-23 101
MS.gene34563.t1 AT1G16930 25.478 471 276 15 10 434 8 449 5.78e-23 101
MS.gene34563.t1 AT1G16930 25.478 471 276 15 10 434 8 449 5.78e-23 101
MS.gene34563.t1 AT1G16930 25.478 471 276 15 10 434 8 449 5.78e-23 101
MS.gene34563.t1 AT1G51370 27.790 457 254 18 10 429 13 430 1.59e-22 99.8
MS.gene34563.t1 AT3G26930 27.021 470 266 16 6 434 10 443 4.90e-21 95.5
MS.gene34563.t1 AT3G52680 28.224 411 215 16 1 384 6 363 9.19e-21 93.6
MS.gene34563.t1 AT3G51530 25.895 475 276 19 1 434 14 453 9.27e-21 94.7
MS.gene34563.t1 AT5G22730 26.282 468 264 17 16 432 27 464 1.36e-20 94.4
MS.gene34563.t1 AT5G22730 26.282 468 264 17 16 432 27 464 1.36e-20 94.4
MS.gene34563.t1 AT5G22610 26.164 451 264 19 16 431 17 433 2.15e-20 93.6
MS.gene34563.t1 AT5G56400 26.294 483 264 21 1 434 16 455 2.43e-20 93.2
MS.gene34563.t1 AT1G78750 24.632 475 294 16 1 431 1 455 5.18e-20 92.4
MS.gene34563.t1 AT1G78750 24.632 475 294 16 1 431 1 455 5.18e-20 92.4
MS.gene34563.t1 AT1G06630 28.398 412 235 13 17 391 12 400 1.22e-19 90.9
MS.gene34563.t1 AT1G06630 28.398 412 235 13 17 391 12 400 1.22e-19 90.9
MS.gene34563.t1 AT1G06630 28.398 412 235 13 17 391 12 400 1.22e-19 90.9
MS.gene34563.t1 AT1G06630 28.398 412 235 13 17 391 12 400 1.22e-19 90.9
MS.gene34563.t1 AT1G06630 31.159 276 145 9 17 264 12 270 1.30e-19 89.4
MS.gene34563.t1 AT1G06630 28.398 412 235 13 17 391 21 409 1.65e-19 90.5
MS.gene34563.t1 AT1G06630 31.159 276 145 9 17 264 12 270 1.90e-19 89.7
MS.gene34563.t1 AT1G06630 31.159 276 145 9 17 264 12 270 1.90e-19 89.7
MS.gene34563.t1 AT1G78760 23.729 472 282 18 4 432 5 441 3.05e-19 90.1
MS.gene34563.t1 AT2G04230 26.144 459 293 17 7 434 3 446 5.00e-19 89.4
MS.gene34563.t1 AT1G06630 31.159 276 145 9 17 264 12 270 5.74e-19 89.4
MS.gene34563.t1 AT3G59200 31.469 286 131 12 17 264 7 265 8.44e-19 87.8
MS.gene34563.t1 AT1G13780 24.348 460 286 16 17 431 10 452 8.71e-19 88.6
MS.gene34563.t1 AT3G50710 26.154 455 270 18 17 434 2 427 1.13e-18 88.2
MS.gene34563.t1 AT5G44490 24.947 473 290 20 1 431 1 450 1.72e-18 87.8
MS.gene34563.t1 AT3G59200 26.337 486 256 19 17 431 7 461 1.85e-18 88.2
MS.gene34563.t1 AT5G60610 26.429 420 242 16 17 403 2 387 2.26e-18 87.0
MS.gene34563.t1 AT5G60610 26.429 420 242 16 17 403 2 387 2.26e-18 87.0
MS.gene34563.t1 AT5G44490 24.947 473 290 20 1 431 1 450 2.34e-18 87.4
MS.gene34563.t1 AT5G38590 28.413 271 150 10 17 263 2 252 3.67e-18 84.7
MS.gene34563.t1 AT2G26030 24.468 470 270 16 17 431 4 443 3.68e-18 86.7
MS.gene34563.t1 AT1G80470 22.388 469 293 15 1 432 1 435 4.24e-18 86.7
MS.gene34563.t1 AT5G56370 28.977 352 187 15 17 343 2 315 4.68e-18 85.1
MS.gene34563.t1 AT2G26030 25.053 471 261 18 17 431 4 438 5.22e-18 86.3
MS.gene34563.t1 AT2G26030 25.053 471 261 18 17 431 4 438 5.22e-18 86.3
MS.gene34563.t1 AT5G44950 27.546 432 243 18 17 405 4 408 6.14e-18 85.9
MS.gene34563.t1 AT5G22660 24.946 461 272 17 16 431 12 443 1.05e-17 85.5
MS.gene34563.t1 AT5G56380 25.054 463 277 16 17 434 2 439 1.32e-17 85.1
MS.gene34563.t1 AT5G56380 25.054 463 277 16 17 434 2 439 1.32e-17 85.1
MS.gene34563.t1 AT5G22610 25.210 476 267 20 16 431 17 463 1.80e-17 85.1
MS.gene34563.t1 AT3G58860 30.855 269 147 10 14 257 4 258 1.97e-17 84.7
MS.gene34563.t1 AT1G51370 28.109 402 215 16 10 375 13 376 2.11e-17 84.3
MS.gene34563.t1 AT5G56820 26.383 470 244 21 11 431 7 423 3.50e-17 83.6
MS.gene34563.t1 AT4G09920 30.120 249 130 10 17 240 2 231 3.79e-17 82.0
MS.gene34563.t1 AT4G09920 30.120 249 130 10 17 240 2 231 3.79e-17 82.0
MS.gene34563.t1 AT4G09920 30.120 249 130 10 17 240 2 231 3.79e-17 82.0
MS.gene34563.t1 AT5G27750 24.364 472 284 18 17 434 5 457 5.41e-17 83.2
MS.gene34563.t1 AT3G26922 30.258 271 145 11 16 262 13 263 5.52e-17 81.6
MS.gene34563.t1 AT3G26922 30.258 271 145 11 16 262 13 263 5.52e-17 81.6
MS.gene34563.t1 AT4G15060 29.762 252 141 11 14 243 23 260 7.33e-17 82.8
MS.gene34563.t1 AT4G09920 30.120 249 130 10 17 240 2 231 7.44e-17 81.6
MS.gene34563.t1 AT4G09920 30.120 249 130 10 17 240 2 231 7.44e-17 81.6
MS.gene34563.t1 AT5G41840 30.287 383 195 17 17 341 14 382 1.00e-16 82.8
MS.gene34563.t1 AT1G66310 23.126 467 295 14 1 431 1 439 1.43e-16 82.0
MS.gene34563.t1 AT4G15060 29.719 249 139 11 17 243 172 406 1.50e-16 82.4
MS.gene34563.t1 AT5G50270 26.773 437 253 19 17 416 2 408 3.41e-16 80.5
MS.gene34563.t1 AT5G56690 25.472 424 248 17 19 402 4 399 3.42e-16 80.5
MS.gene34563.t1 AT3G26920 27.139 339 206 12 121 433 16 339 3.94e-16 79.7
MS.gene34563.t1 AT3G26920 27.139 339 206 12 121 433 16 339 3.94e-16 79.7
MS.gene34563.t1 AT4G13985 23.779 471 304 15 1 431 1 456 4.55e-16 80.5
MS.gene34563.t1 AT3G49020 25.490 459 284 17 8 434 13 445 5.02e-16 80.1
MS.gene34563.t1 AT1G66290 23.640 478 258 22 11 431 23 450 5.99e-16 80.1
MS.gene34563.t1 AT4G27050 30.208 288 152 13 17 270 4 276 6.44e-16 80.1
MS.gene34563.t1 AT4G27050 30.208 288 152 13 17 270 4 276 6.44e-16 80.1
MS.gene34563.t1 AT4G27050 30.208 288 152 13 17 270 4 276 6.44e-16 80.1
MS.gene34563.t1 AT4G27050 30.208 288 152 13 17 270 4 276 6.44e-16 80.1
MS.gene34563.t1 AT4G27050 30.208 288 152 13 17 270 4 276 6.44e-16 80.1
MS.gene34563.t1 AT1G69630 24.733 469 284 17 1 426 1 443 6.45e-16 80.1
MS.gene34563.t1 AT5G53635 23.340 467 263 15 19 433 2 425 7.01e-16 79.7
MS.gene34563.t1 AT3G58920 26.477 491 264 20 17 434 2 468 7.09e-16 80.1
MS.gene34563.t1 AT1G66320 24.096 498 246 23 6 432 19 455 4.23e-15 77.4
MS.gene34563.t1 AT5G56800 28.519 270 156 13 182 434 95 344 4.93e-15 76.6
MS.gene34563.t1 AT5G22720 25.610 492 253 23 11 433 17 464 4.93e-15 77.4
MS.gene34563.t1 AT3G49480 26.258 457 257 18 16 425 11 434 5.64e-15 77.0
MS.gene34563.t1 AT3G59190 30.314 287 158 13 5 264 2 273 5.69e-15 76.6
MS.gene34563.t1 AT3G59190 30.314 287 158 13 5 264 2 273 8.88e-15 76.6
MS.gene34563.t1 AT5G56810 26.637 443 271 14 17 431 15 431 1.10e-14 76.3
MS.gene34563.t1 AT4G00315 24.359 468 274 22 17 433 2 440 1.28e-14 75.9
MS.gene34563.t1 AT5G62970 23.567 471 282 20 17 433 2 448 2.12e-14 75.1
MS.gene34563.t1 AT4G14103 29.643 280 142 12 17 264 8 264 2.33e-14 75.1
MS.gene34563.t1 AT4G14103 26.455 378 200 17 17 360 8 341 2.76e-14 74.7
MS.gene34563.t1 AT4G14103 26.455 378 200 17 17 360 8 341 2.76e-14 74.7
MS.gene34563.t1 AT1G51370 27.624 362 194 14 10 341 13 336 2.96e-14 73.9
MS.gene34563.t1 AT3G58880 27.671 365 214 15 17 345 3 353 8.28e-14 73.6
MS.gene34563.t1 AT5G25860 24.480 433 235 19 9 373 4 412 1.58e-13 72.4
MS.gene34563.t1 AT1G55660 24.628 471 269 23 17 433 53 491 1.70e-13 72.8
MS.gene34563.t1 AT1G13780 26.006 323 180 13 17 296 10 316 2.01e-13 71.6
MS.gene34563.t1 AT5G22670 24.843 479 273 19 5 434 2 442 5.06e-13 70.9
MS.gene34563.t1 AT3G58930 32.584 178 103 7 17 185 2 171 5.58e-13 70.9
MS.gene34563.t1 AT3G58930 32.584 178 103 7 17 185 2 171 5.58e-13 70.9
MS.gene34563.t1 AT3G58930 32.584 178 103 7 17 185 2 171 5.58e-13 70.9
MS.gene34563.t1 AT5G56570 21.957 460 291 17 1 434 22 439 5.67e-13 70.9
MS.gene34563.t1 AT1G55660 28.400 250 136 12 17 240 53 285 6.59e-13 70.1
MS.gene34563.t1 AT2G42730 24.783 460 285 20 17 431 5 448 6.66e-13 70.9
MS.gene34563.t1 AT5G38590 27.650 217 115 9 17 209 2 200 8.44e-13 68.9
MS.gene34563.t1 AT4G14096 29.242 277 145 11 17 264 8 262 9.79e-13 70.1
MS.gene34563.t1 AT4G14096 29.242 277 145 11 17 264 8 262 9.79e-13 70.1
MS.gene34563.t1 AT3G58900 28.000 275 156 10 17 264 2 261 1.59e-12 68.6
MS.gene34563.t1 AT3G60040 29.643 280 157 14 17 264 13 284 1.60e-12 69.7
MS.gene34563.t1 AT3G58900 28.000 275 156 10 17 264 2 261 1.81e-12 68.6
MS.gene34563.t1 AT3G58900 28.000 275 156 10 17 264 2 261 1.81e-12 68.6
MS.gene34563.t1 AT3G60040 29.643 280 157 14 17 264 232 503 2.13e-12 69.7
MS.gene34563.t1 AT3G60040 29.643 280 157 14 17 264 230 501 2.39e-12 69.3
MS.gene34563.t1 AT3G60040 29.643 280 157 14 17 264 233 504 2.54e-12 69.3
MS.gene34563.t1 AT3G60040 29.643 280 157 14 17 264 232 503 2.56e-12 69.3
MS.gene34563.t1 AT5G22700 23.223 422 243 15 3 376 29 417 3.81e-12 68.6
MS.gene34563.t1 AT3G58900 28.364 275 155 11 17 264 2 261 5.93e-12 67.8
MS.gene34563.t1 AT3G58940 27.419 372 193 18 17 345 2 339 6.12e-12 68.2
MS.gene34563.t1 AT3G58940 27.419 372 193 18 17 345 2 339 6.12e-12 68.2
MS.gene34563.t1 AT5G41630 27.056 377 210 16 17 341 12 375 6.61e-12 67.4
MS.gene34563.t1 AT1G78840 22.707 458 287 14 14 431 2 432 7.30e-12 67.4
MS.gene34563.t1 AT1G78840 22.707 458 287 14 14 431 2 432 7.30e-12 67.4
MS.gene34563.t1 AT5G56410 25.221 452 261 22 17 419 2 425 1.09e-11 67.0
MS.gene34563.t1 AT3G59000 30.126 239 125 10 17 240 2 213 1.34e-11 66.2
MS.gene34563.t1 AT3G28410 25.387 323 177 16 17 307 28 318 1.36e-11 66.6
MS.gene34563.t1 AT1G13570 23.556 450 275 15 14 433 3 413 1.83e-11 66.2
MS.gene34563.t1 AT1G13570 23.556 450 275 15 14 433 3 413 1.83e-11 66.2
MS.gene34563.t1 AT5G22700 23.171 410 234 15 15 376 4 380 2.08e-11 65.9
MS.gene34563.t1 AT5G22700 23.171 410 234 15 15 376 4 380 2.08e-11 65.9
MS.gene34563.t1 AT5G22700 23.171 410 234 15 15 376 4 380 2.08e-11 65.9
MS.gene34563.t1 AT5G22700 23.171 410 234 15 15 376 4 380 2.08e-11 65.9
MS.gene34563.t1 AT5G38396 28.826 281 149 13 17 264 2 264 2.30e-11 65.9
MS.gene34563.t1 AT4G00320 26.525 377 228 14 6 341 2 370 3.40e-11 65.5
MS.gene34563.t1 AT5G22730 28.682 258 130 11 16 239 27 264 4.18e-11 64.7
MS.gene34563.t1 AT3G59230 28.522 291 141 13 17 264 12 278 5.66e-11 64.7
MS.gene34563.t1 AT5G02700 25.625 320 179 15 17 307 27 316 7.92e-11 64.3

Find 87 sgRNAs with CRISPR-Local

Find 162 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGAGTATGTTATGCAAAA+AGG 0.247878 6.3:+53223138 MS.gene34563:CDS
AGTTGGGTTCGTGTCGTCAT+TGG 0.303905 6.3:+53221029 MS.gene34563:CDS
AGATCCAGAACTTCGATGTT+TGG 0.318126 6.3:-53222262 None:intergenic
CTCGCCGATGGCAACACCTT+TGG 0.326594 6.3:+53220811 MS.gene34563:CDS
CTGCCCAAACATCGAAGTTC+TGG 0.347616 6.3:+53222258 MS.gene34563:CDS
GCAAACATTGTCCGTGCTAT+TGG 0.349235 6.3:-53222296 None:intergenic
TGTTGAGGAGCTTGAGTAAT+GGG 0.353728 6.3:-53222513 None:intergenic
GCCTGAGTGAAACGAGGTTT+GGG 0.354343 6.3:-53221151 None:intergenic
GATCCAGAACTTCGATGTTT+GGG 0.361201 6.3:-53222261 None:intergenic
TGTGGAGCCCATCCTAAAAT+TGG 0.362734 6.3:-53223030 None:intergenic
GCCAGTGGAAACAATTGTTT+TGG 0.363656 6.3:-53220781 None:intergenic
TACGTAATCCCCGCGTCGTT+CGG 0.379541 6.3:+53220940 MS.gene34563:CDS
TAAATTGTTGTCGTTGATAA+GGG 0.382087 6.3:-53220988 None:intergenic
GTAAATTGTTGTCGTTGATA+AGG 0.393847 6.3:-53220989 None:intergenic
TGCCTGAGTGAAACGAGGTT+TGG 0.406372 6.3:-53221152 None:intergenic
GTTGGGTTCGTGTCGTCATT+GGG 0.413997 6.3:+53221030 MS.gene34563:CDS
AAGCAAGCTGAGGAGAGAAT+TGG 0.414523 6.3:-53222770 None:intergenic
GATTATTGCTGATATTTCCT+TGG 0.424455 6.3:+53223179 MS.gene34563:CDS
AACTTGCGAGTCTACCTATA+CGG 0.433159 6.3:-53220890 None:intergenic
AATTGACATCTTCGGTTATG+TGG 0.433299 6.3:+53222204 MS.gene34563:CDS
AAACATCGCTGAATGTGTAT+TGG 0.435155 6.3:-53222417 None:intergenic
TGCCCGTTCAGTTGACAGTT+GGG 0.443838 6.3:+53221013 MS.gene34563:CDS
AACCCAACTGTCAACTGAAC+GGG 0.451315 6.3:-53221015 None:intergenic
ATTTAGATCTCACTCTTCCC+TGG 0.457886 6.3:+53222740 MS.gene34563:CDS
GCCTTCCACCTACCTTGAAA+AGG 0.465640 6.3:+53222317 MS.gene34563:CDS
CGACACATTTCTGATGCTCT+TGG 0.469372 6.3:-53223246 None:intergenic
TACCTATACGGTTAGCAGAT+TGG 0.477461 6.3:-53220878 None:intergenic
TAAATTGAATAAAGGTAAGG+TGG 0.483200 6.3:-53223080 None:intergenic
ACCAAAACAATTGTTTCCAC+TGG 0.491092 6.3:+53220780 MS.gene34563:CDS
GTGCCCGTTCAGTTGACAGT+TGG 0.498017 6.3:+53221012 MS.gene34563:CDS
AGCTCCTCAACAATCTCTCC+AGG 0.498119 6.3:+53222524 MS.gene34563:CDS
CGGTTATGTGGAAGTGCCTA+TGG 0.502768 6.3:+53222216 MS.gene34563:CDS
TACCAATCTGCTAACCGTAT+AGG 0.513924 6.3:+53220876 MS.gene34563:CDS
GAATGTCGTACTTCATACCT+TGG 0.514533 6.3:-53223203 None:intergenic
CTGGCTGTCTTTCTCGCCGA+TGG 0.519124 6.3:+53220799 MS.gene34563:CDS
CGTCATTGGGCCTCACCTCA+AGG 0.523497 6.3:+53221043 MS.gene34563:CDS
AAATTGAATAAAGGTAAGGT+GGG 0.524970 6.3:-53223079 None:intergenic
CTCAGAGGAAGCTTGAAGTC+GGG 0.527584 6.3:-53221116 None:intergenic
TTGTTGAGGAGCTTGAGTAA+TGG 0.530004 6.3:-53222514 None:intergenic
GGTATGACAGGATGTGGTTG+AGG 0.532367 6.3:-53220752 None:intergenic
ATCAAAATAGAGAATGAAGA+CGG 0.536422 6.3:+53222346 MS.gene34563:CDS
TATACGGTTAGCAGATTGGT+AGG 0.540234 6.3:-53220874 None:intergenic
GCTCAGAGGAAGCTTGAAGT+CGG 0.541393 6.3:-53221117 None:intergenic
GGCGCATTTATTTCAAGCGA+AGG 0.542343 6.3:-53222370 None:intergenic
CACTTAGGAGCACTAGGCTG+TGG 0.544015 6.3:-53223048 None:intergenic
GCTGATATTTCCTTGGACCA+AGG 0.544949 6.3:+53223186 MS.gene34563:CDS
ATGTGGTTGAGGACATCGTC+TGG 0.546232 6.3:-53220741 None:intergenic
TTCGATGATGATGACGTCGA+TGG 0.546235 6.3:+53221092 MS.gene34563:CDS
CGCATCTTCCGAACGACGCG+GGG 0.555033 6.3:-53220948 None:intergenic
GTTTCCAAAGGTGTTGCCAT+CGG 0.556729 6.3:-53220815 None:intergenic
ATACTGCTAATTGACATCTT+CGG 0.557259 6.3:+53222196 MS.gene34563:CDS
TCTTAAAATTCGAAACGAGA+AGG 0.560481 6.3:+53222816 MS.gene34563:CDS
TACGGTTAGCAGATTGGTAG+GGG 0.562191 6.3:-53220872 None:intergenic
ACGCATCTTCCGAACGACGC+GGG 0.563207 6.3:-53220949 None:intergenic
GCCCAAACCTCGTTTCACTC+AGG 0.564786 6.3:+53221150 MS.gene34563:CDS
GAACCCAACTGTCAACTGAA+CGG 0.574470 6.3:-53221016 None:intergenic
TCGGGAGGTATGACAGGATG+TGG 0.575276 6.3:-53220758 None:intergenic
GACGTCATCATCATCGAAGA+CGG 0.575327 6.3:-53221087 None:intergenic
ACGAGACACTTAGGAGCACT+AGG 0.575659 6.3:-53223054 None:intergenic
AGGTGGGATACGAGACACTT+AGG 0.576697 6.3:-53223063 None:intergenic
CGAGGTTTGGGCAAGTGAAG+AGG 0.580117 6.3:-53221139 None:intergenic
CATCGGAAGAGAAAGATGAC+AGG 0.581185 6.3:+53220706 MS.gene34563:CDS
TCAAAATAGAGAATGAAGAC+GGG 0.581709 6.3:+53222347 MS.gene34563:CDS
GCGGACGAACAGTGGCTGCT+TGG 0.585344 6.3:+53222673 MS.gene34563:intron
GAGAGAATTGGAGTTAAACC+AGG 0.588263 6.3:-53222758 None:intergenic
ACGTCATCATCATCGAAGAC+GGG 0.589288 6.3:-53221086 None:intergenic
ATACGGTTAGCAGATTGGTA+GGG 0.592022 6.3:-53220873 None:intergenic
CATAGTAGTGCATTCACCAT+AGG 0.595572 6.3:-53222232 None:intergenic
GTACTTCATACCTTGGTCCA+AGG 0.607563 6.3:-53223196 None:intergenic
GGGCAAGTGAAGAGGCTCAG+AGG 0.612863 6.3:-53221131 None:intergenic
CATCATCATCGAAGACGGGA+AGG 0.613821 6.3:-53221082 None:intergenic
TTGTCCTGGAGAGATTGTTG+AGG 0.613886 6.3:-53222528 None:intergenic
TTTGAGCGATTCAACAACCA+AGG 0.621961 6.3:+53222561 MS.gene34563:CDS
TCGGCGAGAAAGACAGCCAG+TGG 0.623218 6.3:-53220796 None:intergenic
AGGTCGAGTTCCTTGAGGTG+AGG 0.625001 6.3:-53221053 None:intergenic
CGAAGACGGGAAGGAGATCG+AGG 0.630663 6.3:-53221073 None:intergenic
GATCGAGGTCGAGTTCCTTG+AGG 0.642609 6.3:-53221058 None:intergenic
CCACATGGAGATGTTTCCAA+AGG 0.649931 6.3:-53220827 None:intergenic
GACATTTGTGAAGCAAGCTG+AGG 0.652699 6.3:-53222780 None:intergenic
ATGGTGAATGCACTACTATG+TGG 0.653386 6.3:+53222235 MS.gene34563:CDS
AGAGAATTGGAGTTAAACCA+GGG 0.654053 6.3:-53222757 None:intergenic
GACGCATCTTCCGAACGACG+CGG 0.678397 6.3:-53220950 None:intergenic
ACGACGAAATCATACGACAA+AGG 0.683215 6.3:-53222490 None:intergenic
ATTCACAGAAATCTACCACA+TGG 0.692434 6.3:-53220842 None:intergenic
GAACGACGCGGGGATTACGT+AGG 0.692885 6.3:-53220938 None:intergenic
GCACGTGCCTGAGTGAAACG+AGG 0.718712 6.3:-53221157 None:intergenic
CCTTTGGAAACATCTCCATG+TGG 0.759947 6.3:+53220827 MS.gene34563:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAATAATAAATGTTATTG+TGG + chr6.3:53221210-53221229 MS.gene34563:intron 10.0%
!!! ATTCAATTTAAAAATTTTCA+TGG + chr6.3:53223093-53223112 MS.gene34563:CDS 10.0%
!!! TTAAATCTATGAAACATTTT+TGG + chr6.3:53221991-53222010 MS.gene34563:intron 15.0%
!!! TTGATTTTGATTAAATTCAT+AGG + chr6.3:53221373-53221392 MS.gene34563:intron 15.0%
!!! TTTTAAATTGAATAAAGGTA+AGG - chr6.3:53223086-53223105 None:intergenic 15.0%
!! AAAAAAAAGAAGAAGAAGAT+TGG - chr6.3:53221265-53221284 None:intergenic 20.0%
!! AAAAAACTAGCAGTAAAAAA+TGG - chr6.3:53221185-53221204 None:intergenic 20.0%
!! ACTAAAATAAAACTTAACCT+TGG - chr6.3:53222581-53222600 None:intergenic 20.0%
!! GGAATTAAGTTACTAATTAT+TGG - chr6.3:53221865-53221884 None:intergenic 20.0%
!!! ATGTGTATTGGTAAATTTTA+AGG - chr6.3:53222408-53222427 None:intergenic 20.0%
!!! ATTTTAAGAACTTCAAGAAT+AGG - chr6.3:53222805-53222824 None:intergenic 20.0%
!!! TTAATCTTTTGTATAAACCT+TGG + chr6.3:53221615-53221634 MS.gene34563:intron 20.0%
!!! TTTTCAAAGTATCATGTAAT+TGG - chr6.3:53221886-53221905 None:intergenic 20.0%
! AAATTGAATAAAGGTAAGGT+GGG - chr6.3:53223082-53223101 None:intergenic 25.0%
! AGAAGAAGATAATTGTTGAA+TGG + chr6.3:53221809-53221828 MS.gene34563:intron 25.0%
! ATCAAAATAGAGAATGAAGA+CGG + chr6.3:53222346-53222365 MS.gene34563:CDS 25.0%
! ATTCTTGAAAAAGTAGATCA+CGG - chr6.3:53222705-53222724 None:intergenic 25.0%
! CTAATTAATACTTGACAATG+CGG + chr6.3:53222654-53222673 MS.gene34563:intron 25.0%
! TAAATTGAATAAAGGTAAGG+TGG - chr6.3:53223083-53223102 None:intergenic 25.0%
! TGATTTAGTGTGTAAATTGA+TGG - chr6.3:53221957-53221976 None:intergenic 25.0%
! TTGTGCATTTCAAATTACAA+CGG + chr6.3:53221405-53221424 MS.gene34563:intron 25.0%
!! TAAATTGTTGTCGTTGATAA+GGG - chr6.3:53220991-53221010 None:intergenic 25.0%
!! TAACTTTTTAACCAATAGCA+CGG + chr6.3:53222285-53222304 MS.gene34563:CDS 25.0%
!!! ACACACTAAATCACTTTTTT+GGG + chr6.3:53221964-53221983 MS.gene34563:intron 25.0%
!!! ATTTTAAGGTACTCAAGATT+TGG - chr6.3:53222394-53222413 None:intergenic 25.0%
!!! TACACACTAAATCACTTTTT+TGG + chr6.3:53221963-53221982 MS.gene34563:intron 25.0%
!!! TCAAAAGTCTTTTGGAAAAT+TGG + chr6.3:53221740-53221759 MS.gene34563:intron 25.0%
AGAATCACATACCTGATTAA+CGG + chr6.3:53221646-53221665 MS.gene34563:intron 30.0%
ATACTGCTAATTGACATCTT+CGG + chr6.3:53222196-53222215 MS.gene34563:CDS 30.0%
ATCCACTAAAAAAACTTCAG+AGG + chr6.3:53221545-53221564 MS.gene34563:intron 30.0%
GATTATTGCTGATATTTCCT+TGG + chr6.3:53223179-53223198 MS.gene34563:CDS 30.0%
GTAAATTGTTGTCGTTGATA+AGG - chr6.3:53220992-53221011 None:intergenic 30.0%
GTTGAGTATGTTATGCAAAA+AGG + chr6.3:53223138-53223157 MS.gene34563:CDS 30.0%
TCAAAATAGAGAATGAAGAC+GGG + chr6.3:53222347-53222366 MS.gene34563:CDS 30.0%
TCTTAAAATTCGAAACGAGA+AGG + chr6.3:53222816-53222835 MS.gene34563:CDS 30.0%
TTCTTGAAAAAGTAGATCAC+GGG - chr6.3:53222704-53222723 None:intergenic 30.0%
TTGTGGAAAAGTTGAATCTT+TGG + chr6.3:53221227-53221246 MS.gene34563:intron 30.0%
!! TATGTCATAGCTTTAAGTGT+TGG - chr6.3:53221297-53221316 None:intergenic 30.0%
!! TTTGATTTTCAGCCTTTTCA+AGG - chr6.3:53222332-53222351 None:intergenic 30.0%
AAACATCGCTGAATGTGTAT+TGG - chr6.3:53222420-53222439 None:intergenic 35.0%
AATTGACATCTTCGGTTATG+TGG + chr6.3:53222204-53222223 MS.gene34563:CDS 35.0%
ACAACACGACATGAACATAT+TGG - chr6.3:53222020-53222039 None:intergenic 35.0%
ACCAAAACAATTGTTTCCAC+TGG + chr6.3:53220780-53220799 MS.gene34563:CDS 35.0%
AGAGAATTGGAGTTAAACCA+GGG - chr6.3:53222760-53222779 None:intergenic 35.0%
ATTAGCAGTATCTTCAGTGA+TGG - chr6.3:53222187-53222206 None:intergenic 35.0%
ATTCACAGAAATCTACCACA+TGG - chr6.3:53220845-53220864 None:intergenic 35.0%
GATTCAAGGCATATACACTT+TGG - chr6.3:53222052-53222071 None:intergenic 35.0%
TCTTGAAAAAGTAGATCACG+GGG - chr6.3:53222703-53222722 None:intergenic 35.0%
TGTGATTCTATGTATAGCCA+AGG - chr6.3:53221635-53221654 None:intergenic 35.0%
TTCGTAAAAGATGTCTTGCA+GGG + chr6.3:53221521-53221540 MS.gene34563:intron 35.0%
! CAAAACTAGATGTTTTGTCC+TGG - chr6.3:53222545-53222564 None:intergenic 35.0%
! CTCAAAACGACAAAAAGCAT+CGG + chr6.3:53220689-53220708 MS.gene34563:CDS 35.0%
! GCACTGATACATAAGATTCA+AGG - chr6.3:53222066-53222085 None:intergenic 35.0%
! TGTGTAAATTGATGGCATGT+TGG - chr6.3:53221949-53221968 None:intergenic 35.0%
!! AACAGTCACCAATTTTAGGA+TGG + chr6.3:53223022-53223041 MS.gene34563:CDS 35.0%
!! ATTTTCAGCCTTTTCAAGGT+AGG - chr6.3:53222328-53222347 None:intergenic 35.0%
!!! ACAGTCACCAATTTTAGGAT+GGG + chr6.3:53223023-53223042 MS.gene34563:CDS 35.0%
!!! AGCCTCTGAAGTTTTTTTAG+TGG - chr6.3:53221550-53221569 None:intergenic 35.0%
!!! GTGGAAACAATTGTTTTGGT+CGG - chr6.3:53220780-53220799 None:intergenic 35.0%
!!! TGGAAACAATTGTTTTGGTC+GGG - chr6.3:53220779-53220798 None:intergenic 35.0%
AACGAGGATGTATTGAGTCA+AGG - chr6.3:53221447-53221466 None:intergenic 40.0%
AACTTGCGAGTCTACCTATA+CGG - chr6.3:53220893-53220912 None:intergenic 40.0%
ACGACGAAATCATACGACAA+AGG - chr6.3:53222493-53222512 None:intergenic 40.0%
AGATCCAGAACTTCGATGTT+TGG - chr6.3:53222265-53222284 None:intergenic 40.0%
AGATTCTCTAGCCGTTAATC+AGG - chr6.3:53221660-53221679 None:intergenic 40.0%
ATACGGTTAGCAGATTGGTA+GGG - chr6.3:53220876-53220895 None:intergenic 40.0%
ATGGTGAATGCACTACTATG+TGG + chr6.3:53222235-53222254 MS.gene34563:CDS 40.0%
ATGTAAACTTGTCCACACCA+AGG + chr6.3:53221692-53221711 MS.gene34563:intron 40.0%
ATTTAGATCTCACTCTTCCC+TGG + chr6.3:53222740-53222759 MS.gene34563:CDS 40.0%
CATAGTAGTGCATTCACCAT+AGG - chr6.3:53222235-53222254 None:intergenic 40.0%
GAATGTCGTACTTCATACCT+TGG - chr6.3:53223206-53223225 None:intergenic 40.0%
GAATTCCATTGCTAAGACTG+TGG - chr6.3:53222129-53222148 None:intergenic 40.0%
GAGAGAATTGGAGTTAAACC+AGG - chr6.3:53222761-53222780 None:intergenic 40.0%
GATCCAGAACTTCGATGTTT+GGG - chr6.3:53222264-53222283 None:intergenic 40.0%
GGAAGTTGAATATGCTACAG+AGG + chr6.3:53221761-53221780 MS.gene34563:intron 40.0%
GTCTTGAAGGAGACAAATGA+GGG + chr6.3:53221715-53221734 MS.gene34563:intron 40.0%
GTTCGTAAAAGATGTCTTGC+AGG + chr6.3:53221520-53221539 MS.gene34563:intron 40.0%
TACCAATCTGCTAACCGTAT+AGG + chr6.3:53220876-53220895 MS.gene34563:CDS 40.0%
TACCTATACGGTTAGCAGAT+TGG - chr6.3:53220881-53220900 None:intergenic 40.0%
TATACGGTTAGCAGATTGGT+AGG - chr6.3:53220877-53220896 None:intergenic 40.0%
TCTGTGTCGTGACAAACAAT+AGG + chr6.3:53221481-53221500 MS.gene34563:intron 40.0%
TGTAAACTTGTCCACACCAA+GGG + chr6.3:53221693-53221712 MS.gene34563:intron 40.0%
TGTTGAGGAGCTTGAGTAAT+GGG - chr6.3:53222516-53222535 None:intergenic 40.0%
TTGACTCAATACATCCTCGT+TGG + chr6.3:53221446-53221465 MS.gene34563:intron 40.0%
TTGTTCCACAGTCTTAGCAA+TGG + chr6.3:53222121-53222140 MS.gene34563:intron 40.0%
TTGTTGAGGAGCTTGAGTAA+TGG - chr6.3:53222517-53222536 None:intergenic 40.0%
TTTGAGCGATTCAACAACCA+AGG + chr6.3:53222561-53222580 MS.gene34563:CDS 40.0%
! AAATTGGTGACTGTTCCTGT+AGG - chr6.3:53223017-53223036 None:intergenic 40.0%
! CAAATCCTTTTGTTGCCTAC+AGG + chr6.3:53222999-53223018 MS.gene34563:intron 40.0%
! CAGGAACAGTCACCAATTTT+AGG + chr6.3:53223018-53223037 MS.gene34563:intron 40.0%
! GCCAGTGGAAACAATTGTTT+TGG - chr6.3:53220784-53220803 None:intergenic 40.0%
!! ACATCCTCGTTGGTAATGAT+AGG + chr6.3:53221456-53221475 MS.gene34563:intron 40.0%
!!! AAACAATTGTTTTGGTCGGG+AGG - chr6.3:53220776-53220795 None:intergenic 40.0%
!!! TGAGGGCATCAAAAGTCTTT+TGG + chr6.3:53221732-53221751 MS.gene34563:intron 40.0%
AACCCAACTGTCAACTGAAC+GGG - chr6.3:53221018-53221037 None:intergenic 45.0%
AAGCAAGCTGAGGAGAGAAT+TGG - chr6.3:53222773-53222792 None:intergenic 45.0%
ACGTCATCATCATCGAAGAC+GGG - chr6.3:53221089-53221108 None:intergenic 45.0%
AGAAGAAGATTGGAGCGATG+AGG - chr6.3:53221255-53221274 None:intergenic 45.0%
CATCGGAAGAGAAAGATGAC+AGG + chr6.3:53220706-53220725 MS.gene34563:CDS 45.0%
CCACATGGAGATGTTTCCAA+AGG - chr6.3:53220830-53220849 None:intergenic 45.0%
CGACACATTTCTGATGCTCT+TGG - chr6.3:53223249-53223268 None:intergenic 45.0%
CTGTTCCTGTAGGCAACAAA+AGG - chr6.3:53223007-53223026 None:intergenic 45.0%
GAACCCAACTGTCAACTGAA+CGG - chr6.3:53221019-53221038 None:intergenic 45.0%
GAAGCCTATCATTACCAACG+AGG - chr6.3:53221463-53221482 None:intergenic 45.0%
GACATTTGTGAAGCAAGCTG+AGG - chr6.3:53222783-53222802 None:intergenic 45.0%
GACGTCATCATCATCGAAGA+CGG - chr6.3:53221090-53221109 None:intergenic 45.0%
GCAAACATTGTCCGTGCTAT+TGG - chr6.3:53222299-53222318 None:intergenic 45.0%
GCTGATATTTCCTTGGACCA+AGG + chr6.3:53223186-53223205 MS.gene34563:CDS 45.0%
GGCGCATTTATTTCAAGCGA+AGG - chr6.3:53222373-53222392 None:intergenic 45.0%
GGTCTTGAAGGAGACAAATG+AGG + chr6.3:53221714-53221733 MS.gene34563:intron 45.0%
GTACTTCATACCTTGGTCCA+AGG - chr6.3:53223199-53223218 None:intergenic 45.0%
TACGGTTAGCAGATTGGTAG+GGG - chr6.3:53220875-53220894 None:intergenic 45.0%
TGTGGAGCCCATCCTAAAAT+TGG - chr6.3:53223033-53223052 None:intergenic 45.0%
TTGTCCTGGAGAGATTGTTG+AGG - chr6.3:53222531-53222550 None:intergenic 45.0%
TTTGTCTCCTTCAAGACCCT+TGG - chr6.3:53221712-53221731 None:intergenic 45.0%
! CCTTTGGAAACATCTCCATG+TGG + chr6.3:53220827-53220846 MS.gene34563:CDS 45.0%
! GTTCATGTCGTGTTGTTGTC+TGG + chr6.3:53222024-53222043 MS.gene34563:intron 45.0%
! TTCGATGATGATGACGTCGA+TGG + chr6.3:53221092-53221111 MS.gene34563:CDS 45.0%
!! GTTTCCAAAGGTGTTGCCAT+CGG - chr6.3:53220818-53220837 None:intergenic 45.0%
!! TTCAGCCTTTTCAAGGTAGG+TGG - chr6.3:53222325-53222344 None:intergenic 45.0%
!!! AAAATTTTTAAATTGAATAA+AGG - chr6.3:53223091-53223110 None:intergenic 5.0%
AGCTCCTCAACAATCTCTCC+AGG + chr6.3:53222524-53222543 MS.gene34563:CDS 50.0%
AGGTGGGATACGAGACACTT+AGG - chr6.3:53223066-53223085 None:intergenic 50.0%
AGTTGGGTTCGTGTCGTCAT+TGG + chr6.3:53221029-53221048 MS.gene34563:CDS 50.0%
ATGTGGTTGAGGACATCGTC+TGG - chr6.3:53220744-53220763 None:intergenic 50.0%
CATCATCATCGAAGACGGGA+AGG - chr6.3:53221085-53221104 None:intergenic 50.0%
CTCAGAGGAAGCTTGAAGTC+GGG - chr6.3:53221119-53221138 None:intergenic 50.0%
CTGCCCAAACATCGAAGTTC+TGG + chr6.3:53222258-53222277 MS.gene34563:CDS 50.0%
GCCTGAGTGAAACGAGGTTT+GGG - chr6.3:53221154-53221173 None:intergenic 50.0%
GCCTTCCACCTACCTTGAAA+AGG + chr6.3:53222317-53222336 MS.gene34563:CDS 50.0%
GCTCAGAGGAAGCTTGAAGT+CGG - chr6.3:53221120-53221139 None:intergenic 50.0%
GGTATGACAGGATGTGGTTG+AGG - chr6.3:53220755-53220774 None:intergenic 50.0%
GTTGGGTTCGTGTCGTCATT+GGG + chr6.3:53221030-53221049 MS.gene34563:CDS 50.0%
TGCCCGTTCAGTTGACAGTT+GGG + chr6.3:53221013-53221032 MS.gene34563:CDS 50.0%
TGCCTGAGTGAAACGAGGTT+TGG - chr6.3:53221155-53221174 None:intergenic 50.0%
TTGACAATGCGGACGAACAG+TGG + chr6.3:53222665-53222684 MS.gene34563:intron 50.0%
!! ACGAGACACTTAGGAGCACT+AGG - chr6.3:53223057-53223076 None:intergenic 50.0%
!! CGGTTATGTGGAAGTGCCTA+TGG + chr6.3:53222216-53222235 MS.gene34563:CDS 50.0%
!! GCCTTTTCAAGGTAGGTGGA+AGG - chr6.3:53222321-53222340 None:intergenic 50.0%
!! TTTTGGTCGGGAGGTATGAC+AGG - chr6.3:53220767-53220786 None:intergenic 50.0%
AGGTCGAGTTCCTTGAGGTG+AGG - chr6.3:53221056-53221075 None:intergenic 55.0%
CGAGGTTTGGGCAAGTGAAG+AGG - chr6.3:53221142-53221161 None:intergenic 55.0%
CTCCTTCAAGACCCTTGGTG+TGG - chr6.3:53221707-53221726 None:intergenic 55.0%
GATCGAGGTCGAGTTCCTTG+AGG - chr6.3:53221061-53221080 None:intergenic 55.0%
GCCCAAACCTCGTTTCACTC+AGG + chr6.3:53221150-53221169 MS.gene34563:CDS 55.0%
GTCCACACCAAGGGTCTTGA+AGG + chr6.3:53221702-53221721 MS.gene34563:intron 55.0%
GTGCCCGTTCAGTTGACAGT+TGG + chr6.3:53221012-53221031 MS.gene34563:CDS 55.0%
TACGTAATCCCCGCGTCGTT+CGG + chr6.3:53220940-53220959 MS.gene34563:CDS 55.0%
! TCGGGAGGTATGACAGGATG+TGG - chr6.3:53220761-53220780 None:intergenic 55.0%
!! CACTTAGGAGCACTAGGCTG+TGG - chr6.3:53223051-53223070 None:intergenic 55.0%
ACGCATCTTCCGAACGACGC+GGG - chr6.3:53220952-53220971 None:intergenic 60.0%
CGAAGACGGGAAGGAGATCG+AGG - chr6.3:53221076-53221095 None:intergenic 60.0%
CGTCATTGGGCCTCACCTCA+AGG + chr6.3:53221043-53221062 MS.gene34563:CDS 60.0%
CTCGCCGATGGCAACACCTT+TGG + chr6.3:53220811-53220830 MS.gene34563:CDS 60.0%
CTGGCTGTCTTTCTCGCCGA+TGG + chr6.3:53220799-53220818 MS.gene34563:CDS 60.0%
GAACGACGCGGGGATTACGT+AGG - chr6.3:53220941-53220960 None:intergenic 60.0%
GACGCATCTTCCGAACGACG+CGG - chr6.3:53220953-53220972 None:intergenic 60.0%
GCACGTGCCTGAGTGAAACG+AGG - chr6.3:53221160-53221179 None:intergenic 60.0%
GGGCAAGTGAAGAGGCTCAG+AGG - chr6.3:53221134-53221153 None:intergenic 60.0%
TCGGCGAGAAAGACAGCCAG+TGG - chr6.3:53220799-53220818 None:intergenic 60.0%
CGCATCTTCCGAACGACGCG+GGG - chr6.3:53220951-53220970 None:intergenic 65.0%
GCGGACGAACAGTGGCTGCT+TGG + chr6.3:53222673-53222692 MS.gene34563:intron 65.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 53220675 53223284 53220675 ID=MS.gene34563
chr6.3 mRNA 53220675 53223284 53220675 ID=MS.gene34563.t1;Parent=MS.gene34563
chr6.3 exon 53220675 53221175 53220675 ID=MS.gene34563.t1.exon1;Parent=MS.gene34563.t1
chr6.3 CDS 53220675 53221175 53220675 ID=cds.MS.gene34563.t1;Parent=MS.gene34563.t1
chr6.3 exon 53222196 53222582 53222196 ID=MS.gene34563.t1.exon2;Parent=MS.gene34563.t1
chr6.3 CDS 53222196 53222582 53222196 ID=cds.MS.gene34563.t1;Parent=MS.gene34563.t1
chr6.3 exon 53222685 53222837 53222685 ID=MS.gene34563.t1.exon3;Parent=MS.gene34563.t1
chr6.3 CDS 53222685 53222837 53222685 ID=cds.MS.gene34563.t1;Parent=MS.gene34563.t1
chr6.3 exon 53223021 53223284 53223021 ID=MS.gene34563.t1.exon4;Parent=MS.gene34563.t1
chr6.3 CDS 53223021 53223284 53223021 ID=cds.MS.gene34563.t1;Parent=MS.gene34563.t1
Gene Sequence

>MS.gene34563

ATGGCAGAGTCAAACTCAAAACGACAAAAAGCATCGGAAGAGAAAGATGACAGGATCAGTAGTTTACCAGACGATGTCCTCAACCACATCCTGTCATACCTCCCGACCAAAACAATTGTTTCCACTGGCTGTCTTTCTCGCCGATGGCAACACCTTTGGAAACATCTCCATGTGGTAGATTTCTGTGAATATGATTACCCCTACCAATCTGCTAACCGTATAGGTAGACTCGCAAGTTTTGCTATTTTTGTGAACAACGTGCTCCTACGTAATCCCCGCGTCGTTCGGAAGATGCGTCTTACTTGTGCTCACTCCCTTATCAACGACAACAATTTACGTGCCCGTTCAGTTGACAGTTGGGTTCGTGTCGTCATTGGGCCTCACCTCAAGGAACTCGACCTCGATCTCCTTCCCGTCTTCGATGATGATGACGTCGATGGACCCGACTTCAAGCTTCCTCTGAGCCTCTTCACTTGCCCAAACCTCGTTTCACTCAGGCACGTGCTTCCATTTTTTACTGCTAGTTTTTTCTTTTTTAAATAATAAATGTTATTGTGGAAAAGTTGAATCTTTGGTTCCTCATCGCTCCAATCTTCTTCTTCTTTTTTTTTTTTAATCACCAACACTTAAAGCTATGACATAAAGTAAAACTATTAATTATTCAAGATAATTTTATGAACAATGCTTTTTACAACATTTTGATTTTGATTAAATTCATAGGTATAGATGTTTGTGCATTTCAAATTACAACGGTGTTTTAGAAGAATTTCCTTGACTCAATACATCCTCGTTGGTAATGATAGGCTTCTGTGTCGTGACAAACAATAGGAACTTCAGAATAAGTAGTTCGTAAAAGATGTCTTGCAGGGAATCCACTAAAAAAACTTCAGAGGCTAACTGAAGAAATACTAATCATCTTCAAAAACTAAATTGAAATTATTTAATCTTTTGTATAAACCTTGGCTATACATAGAATCACATACCTGATTAACGGCTAGAGAATCTAAAGTAGAAATTATGTAAACTTGTCCACACCAAGGGTCTTGAAGGAGACAAATGAGGGCATCAAAAGTCTTTTGGAAAATTGGAAGTTGAATATGCTACAGAGGAAAAATTATACAAAAAATTGTAGAGAGAAGAAGATAATTGTTGAATGGTTGATTGATTGATTTGAAATAGCTAGTATACCAATAATTAGTAACTTAATTCCAATTACATGATACTTTGAAAATATATAAGTAATTGAATGTGATCAATATGTCATGTATTGTCCAACATGCCATCAATTTACACACTAAATCACTTTTTTGGGATTTTTAAATCTATGAAACATTTTTGGTAACCAATATGTTCATGTCGTGTTGTTGTCTGGCACCAAAGTGTATATGCCTTGAATCTTATGTATCAGTGCTAAATAGTTATGAAATGTGATATAAAATAATTTGTTTGTTCCACAGTCTTAGCAATGGAATTCATCTAAACATACAAAGATCTACGACAATAAGTTTACCATCACTGAAGATACTGCTAATTGACATCTTCGGTTATGTGGAAGTGCCTATGGTGAATGCACTACTATGTGGCTGCCCAAACATCGAAGTTCTGGATCTTAACTTTTTAACCAATAGCACGGACAATGTTTGCCTTCCACCTACCTTGAAAAGGCTGAAAATCAAAATAGAGAATGAAGACGGGCCTTCGCTTGAAATAAATGCGCCAAATCTTGAGTACCTTAAAATTTACCAATACACATTCAGCGATGTTTTAAACATGAAAAACTTGCTCAACGTTGTAGAAGCAAGTCTTGATCTCTATCCTTTGTCGTATGATTTCGTCGTCCCATTACTCAAGCTCCTCAACAATCTCTCCAGGACAAAACATCTAGTTTTGAGCGATTCAACAACCAAGGTTAAGTTTTATTTTAGTTATTTAATGTTTACTTCATAATTTATATCTACATAGATAGATATTGTTTTGTACTAATTAATACTTGACAATGCGGACGAACAGTGGCTGCTTGGTGAACCCCGTGATCTACTTTTTCAAGAATTTTGCTATTTGCTTCATTTAGATCTCACTCTTCCCTGGTTTAACTCCAATTCTCTCCTCAGCTTGCTTCACAAATGTCCTATTCTTGAAGTTCTTAAAATTCGAAACGAGAAGGTTTGTTTAATCGAAGCTTAATTTGATGTACATAACTTTGATGCGAAATTAATCAATTTTAATGAAATTGATTACATAAATTAGAAGTAGCATCTTATTGAACAGAACATAACTTAATGTATAACATGATTAGTTTATTACTATGAATATTGCATCTTATTCAAATCCTTTTGTTGCCTACAGGAACAGTCACCAATTTTAGGATGGGCTCCACAGCCTAGTGCTCCTAAGTGTCTCGTATCCCACCTTACCTTTATTCAATTTAAAAATTTTCATGGATTTTCTGATGAAATATCATTTGTTGAGTATGTTATGCAAAAAGGACTTGTTTTAAAGACAGTGATTATTGCTGATATTTCCTTGGACCAAGGTATGAAGTACGACATTCTAAAAAGACTATCTAATGTGCCAAGAGCATCAGAAATGTGTCGACTTACATTTGACTGA

Protein sequence

>MS.gene34563.t1

MAESNSKRQKASEEKDDRISSLPDDVLNHILSYLPTKTIVSTGCLSRRWQHLWKHLHVVDFCEYDYPYQSANRIGRLASFAIFVNNVLLRNPRVVRKMRLTCAHSLINDNNLRARSVDSWVRVVIGPHLKELDLDLLPVFDDDDVDGPDFKLPLSLFTCPNLVSLRHILLIDIFGYVEVPMVNALLCGCPNIEVLDLNFLTNSTDNVCLPPTLKRLKIKIENEDGPSLEINAPNLEYLKIYQYTFSDVLNMKNLLNVVEASLDLYPLSYDFVVPLLKLLNNLSRTKHLVLSDSTTKWLLGEPRDLLFQEFCYLLHLDLTLPWFNSNSLLSLLHKCPILEVLKIRNEKEQSPILGWAPQPSAPKCLVSHLTFIQFKNFHGFSDEISFVEYVMQKGLVLKTVIIADISLDQGMKYDILKRLSNVPRASEMCRLTFD