Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34568.t1 | XP_013449941.1 | 97.2 | 326 | 9 | 0 | 1 | 326 | 1 | 326 | 5.30E-180 | 640.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34568.t1 | Q0WQX7 | 63.1 | 298 | 103 | 3 | 29 | 323 | 48 | 341 | 1.3e-105 | 384.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34568.t1 | B7FIQ5 | 97.2 | 326 | 9 | 0 | 1 | 326 | 1 | 326 | 3.8e-180 | 640.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055339 | MS.gene34568 | 0.862223 | 5.90E-64 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene34568 | MS.gene29113 | PPI |
| MS.gene86383 | MS.gene34568 | PPI |
| MS.gene34568 | MS.gene35637 | PPI |
| MS.gene34568 | MS.gene36213 | PPI |
| MS.gene34568 | MS.gene89034 | PPI |
| MS.gene34568 | MS.gene30745 | PPI |
| MS.gene34568 | MS.gene29030 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34568.t1 | MTR_7g498280 | 98.773 | 326 | 4 | 0 | 1 | 326 | 1 | 326 | 0.0 | 654 |
| MS.gene34568.t1 | MTR_4g021755 | 61.702 | 329 | 114 | 4 | 6 | 326 | 8 | 332 | 1.34e-142 | 409 |
| MS.gene34568.t1 | MTR_1g101310 | 63.804 | 326 | 98 | 4 | 4 | 326 | 10 | 318 | 3.50e-139 | 397 |
| MS.gene34568.t1 | MTR_2g097210 | 64.310 | 297 | 100 | 2 | 34 | 326 | 43 | 337 | 2.79e-130 | 377 |
| MS.gene34568.t1 | MTR_7g061780 | 61.131 | 283 | 104 | 3 | 34 | 314 | 25 | 303 | 4.90e-118 | 343 |
| MS.gene34568.t1 | MTR_2g097210 | 66.409 | 259 | 81 | 2 | 34 | 288 | 43 | 299 | 1.01e-112 | 329 |
| MS.gene34568.t1 | MTR_2g103600 | 56.522 | 276 | 112 | 3 | 34 | 302 | 30 | 304 | 6.55e-106 | 312 |
| MS.gene34568.t1 | MTR_3g073530 | 44.595 | 296 | 154 | 2 | 37 | 325 | 42 | 334 | 9.20e-76 | 237 |
| MS.gene34568.t1 | MTR_2g088290 | 35.821 | 268 | 113 | 6 | 55 | 320 | 1 | 211 | 3.25e-38 | 135 |
| MS.gene34568.t1 | MTR_2g088315 | 45.783 | 83 | 45 | 0 | 100 | 182 | 1 | 83 | 1.18e-19 | 82.4 |
| MS.gene34568.t1 | MTR_8g106030 | 36.429 | 140 | 76 | 2 | 169 | 307 | 99 | 226 | 4.08e-15 | 73.9 |
| MS.gene34568.t1 | MTR_0024s0260 | 27.168 | 173 | 119 | 3 | 105 | 271 | 206 | 377 | 4.84e-12 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34568.t1 | AT1G63120 | 66.873 | 323 | 101 | 2 | 1 | 323 | 1 | 317 | 6.22e-150 | 424 |
| MS.gene34568.t1 | AT5G07250 | 65.179 | 336 | 104 | 3 | 1 | 325 | 12 | 345 | 7.77e-145 | 412 |
| MS.gene34568.t1 | AT2G29050 | 64.120 | 301 | 101 | 3 | 29 | 326 | 48 | 344 | 8.53e-140 | 401 |
| MS.gene34568.t1 | AT1G12750 | 59.568 | 324 | 113 | 3 | 1 | 323 | 1 | 307 | 1.72e-136 | 389 |
| MS.gene34568.t1 | AT1G12750 | 59.568 | 324 | 113 | 3 | 1 | 323 | 1 | 307 | 1.72e-136 | 389 |
| MS.gene34568.t1 | AT1G12750 | 59.568 | 324 | 113 | 3 | 1 | 323 | 1 | 307 | 1.72e-136 | 389 |
| MS.gene34568.t1 | AT1G12750 | 59.568 | 324 | 113 | 3 | 1 | 323 | 1 | 307 | 1.72e-136 | 389 |
| MS.gene34568.t1 | AT1G12750 | 59.568 | 324 | 113 | 3 | 1 | 323 | 1 | 307 | 1.72e-136 | 389 |
| MS.gene34568.t1 | AT3G53780 | 53.666 | 341 | 133 | 4 | 3 | 324 | 13 | 347 | 2.07e-123 | 360 |
| MS.gene34568.t1 | AT2G29050 | 58.086 | 303 | 91 | 5 | 29 | 299 | 48 | 346 | 1.10e-117 | 343 |
| MS.gene34568.t1 | AT3G53780 | 53.770 | 305 | 116 | 4 | 3 | 288 | 13 | 311 | 7.31e-106 | 312 |
| MS.gene34568.t1 | AT5G07250 | 53.869 | 336 | 95 | 4 | 1 | 325 | 12 | 298 | 3.09e-105 | 310 |
| MS.gene34568.t1 | AT1G52580 | 53.310 | 287 | 123 | 5 | 23 | 302 | 17 | 299 | 1.23e-100 | 298 |
| MS.gene34568.t1 | AT3G53780 | 59.111 | 225 | 90 | 1 | 100 | 324 | 1 | 223 | 1.89e-97 | 289 |
| MS.gene34568.t1 | AT4G23070 | 53.583 | 321 | 136 | 3 | 2 | 321 | 4 | 312 | 2.03e-96 | 288 |
| MS.gene34568.t1 | AT1G77860 | 44.108 | 297 | 153 | 3 | 37 | 325 | 48 | 339 | 2.73e-87 | 266 |
| MS.gene34568.t1 | AT1G77860 | 44.108 | 297 | 153 | 3 | 37 | 325 | 48 | 339 | 4.76e-87 | 266 |
| MS.gene34568.t1 | AT1G12750 | 58.852 | 209 | 69 | 2 | 1 | 209 | 1 | 192 | 2.15e-84 | 253 |
| MS.gene34568.t1 | AT1G12750 | 59.223 | 206 | 67 | 2 | 1 | 206 | 1 | 189 | 2.40e-84 | 253 |
| MS.gene34568.t1 | AT1G25290 | 34.615 | 156 | 100 | 2 | 104 | 258 | 157 | 311 | 1.16e-16 | 80.1 |
| MS.gene34568.t1 | AT1G25290 | 33.333 | 162 | 101 | 2 | 104 | 258 | 157 | 318 | 9.24e-16 | 77.4 |
Find 78 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTAACTACACTCACTTTAT+TGG | 0.122578 | 6.3:-53080368 | None:intergenic |
| ATTCGCCTTGAACAACAATT+TGG | 0.203114 | 6.3:+53079814 | MS.gene34568:CDS |
| CTCCTTCCCCGTCCTCAATT+TGG | 0.207305 | 6.3:+53081137 | MS.gene34568:CDS |
| AGGTTTACCAATATGTTCTA+TGG | 0.211456 | 6.3:+53081213 | MS.gene34568:CDS |
| GTCGACAATTTCGCTCATAT+TGG | 0.293364 | 6.3:+53081080 | MS.gene34568:CDS |
| AGCATCTCCGTTGGTGCTTC+CGG | 0.298447 | 6.3:+53080283 | MS.gene34568:CDS |
| CATGATGTCCAACTAGTTTC+TGG | 0.304655 | 6.3:-53077908 | None:intergenic |
| CATGTGTTCCAACTTCTAAA+TGG | 0.341794 | 6.3:+53082137 | MS.gene34568:CDS |
| CATATTGGCGGATTCCTAAC+AGG | 0.345493 | 6.3:+53081095 | MS.gene34568:CDS |
| GGAATCGTTTACCTAGTATC+TGG | 0.345805 | 6.3:+53080220 | MS.gene34568:CDS |
| ATTGTCATCAATCTTGTGAT+TGG | 0.349416 | 6.3:+53081044 | MS.gene34568:CDS |
| GTTTACCTAGTATCTGGATT+TGG | 0.367101 | 6.3:+53080226 | MS.gene34568:CDS |
| GGAGACTTGTCTCATGCATT+TGG | 0.378901 | 6.3:+53079734 | MS.gene34568:CDS |
| TCACAACAGCATCCCACTTA+AGG | 0.382515 | 6.3:-53079696 | None:intergenic |
| TTCGCCTTGAACAACAATTT+GGG | 0.400132 | 6.3:+53079815 | MS.gene34568:CDS |
| AACCCTTACGTTTCAGAAGA+AGG | 0.412425 | 6.3:-53078091 | None:intergenic |
| TCGCATTTCCATTTAGAAGT+TGG | 0.417696 | 6.3:-53082145 | None:intergenic |
| ATGATCAGTCTGGTCTTCAT+TGG | 0.423207 | 6.3:+53079790 | MS.gene34568:CDS |
| CTCTCGTACTATTGATTGCC+TGG | 0.425859 | 6.3:+53081243 | MS.gene34568:CDS |
| TGGTTTAGTGATGCTATTGC+GGG | 0.429270 | 6.3:+53082072 | MS.gene34568:CDS |
| CGAACCCAAATTGTTGTTCA+AGG | 0.433969 | 6.3:-53079819 | None:intergenic |
| CACAACAGCATCCCACTTAA+GGG | 0.436258 | 6.3:-53079695 | None:intergenic |
| AGAGATCTAGAGAGAGATGG+TGG | 0.446176 | 6.3:+53077827 | MS.gene34568:CDS |
| ACTCCAGTTTGTGATAAGTT+CGG | 0.447369 | 6.3:-53080338 | None:intergenic |
| CTTGAACAACAATTTGGGTT+CGG | 0.447883 | 6.3:+53079820 | MS.gene34568:CDS |
| ACACGCTGGAATCATTCATT+TGG | 0.450645 | 6.3:+53079759 | MS.gene34568:CDS |
| TACCTAGTATCTGGATTTGG+TGG | 0.452294 | 6.3:+53080229 | MS.gene34568:CDS |
| TTCCTAACAGGATTTCTCCT+TGG | 0.468629 | 6.3:+53081107 | MS.gene34568:CDS |
| GACAATTTCGCTCATATTGG+CGG | 0.473284 | 6.3:+53081083 | MS.gene34568:CDS |
| TTCCCCGTCCTCAATTTGGT+TGG | 0.482477 | 6.3:+53081141 | MS.gene34568:CDS |
| GCTTATACCTATGTTTGTTG+TGG | 0.485030 | 6.3:+53077931 | MS.gene34568:CDS |
| TTTCCGAACTTATCACAAAC+TGG | 0.485212 | 6.3:+53080335 | MS.gene34568:CDS |
| TAGAAGTTGGAACACATGTC+AGG | 0.485216 | 6.3:-53082132 | None:intergenic |
| GGTTTACCAATATGTTCTAT+GGG | 0.487504 | 6.3:+53081214 | MS.gene34568:CDS |
| TGGAAATTTGCAGTGAGGAT+AGG | 0.489071 | 6.3:+53080199 | MS.gene34568:intron |
| TTGAAAGAGAATCCTTTGCT+TGG | 0.490540 | 6.3:+53078067 | MS.gene34568:CDS |
| TTGAATGGTAGGTTATCCAT+TGG | 0.492130 | 6.3:+53082052 | MS.gene34568:intron |
| ACCTAGTATCTGGATTTGGT+GGG | 0.495725 | 6.3:+53080230 | MS.gene34568:CDS |
| CAGAAACTAGTTGGACATCA+TGG | 0.498180 | 6.3:+53077909 | MS.gene34568:CDS |
| AACCAAGGAGAAATCCTGTT+AGG | 0.498873 | 6.3:-53081109 | None:intergenic |
| AGCAAAGGATTCTCTTTCAA+AGG | 0.499402 | 6.3:-53078064 | None:intergenic |
| ATACAACCCATAGAACATAT+TGG | 0.500183 | 6.3:-53081220 | None:intergenic |
| CGAAGATGGGAGCCCTTAAG+TGG | 0.502536 | 6.3:+53079683 | MS.gene34568:CDS |
| GACTTGAGGCGAACACCAGC+AGG | 0.504828 | 6.3:-53081182 | None:intergenic |
| GTTATGATCCAGAAACTAGT+TGG | 0.521904 | 6.3:+53077900 | MS.gene34568:CDS |
| GGCAGCAAACATGATCAGTC+TGG | 0.524653 | 6.3:+53079780 | MS.gene34568:CDS |
| TTGTGAATCATCACCAAGGA+TGG | 0.525415 | 6.3:+53079713 | MS.gene34568:CDS |
| AAGAGCACCGGAAGCACCAA+CGG | 0.530069 | 6.3:-53080290 | None:intergenic |
| ATGAGACAAGTCTCCATCCT+TGG | 0.532446 | 6.3:-53079726 | None:intergenic |
| GCGCAGCGACATGTTCCTGC+TGG | 0.534637 | 6.3:+53081167 | MS.gene34568:CDS |
| GGATCATAACCACTTGAAGT+TGG | 0.535918 | 6.3:-53077887 | None:intergenic |
| GCGGATACGACCACTGCCAT+TGG | 0.539605 | 6.3:+53082101 | MS.gene34568:CDS |
| TAACCAACCAAATTGAGGAC+GGG | 0.543254 | 6.3:-53081144 | None:intergenic |
| TCCCACCAAATCCAGATACT+AGG | 0.555103 | 6.3:-53080231 | None:intergenic |
| TCGCCTCAAGTCTAAGTACA+AGG | 0.555196 | 6.3:+53081193 | MS.gene34568:CDS |
| TGTGATAAGTTCGGAAAGCA+TGG | 0.557185 | 6.3:-53080329 | None:intergenic |
| TGCGCTAACCAACCAAATTG+AGG | 0.558542 | 6.3:-53081149 | None:intergenic |
| GGTAGTGACACCAATGGCAG+TGG | 0.569166 | 6.3:-53082111 | None:intergenic |
| TTGGTTTAGTGATGCTATTG+CGG | 0.570398 | 6.3:+53082071 | MS.gene34568:CDS |
| AGATTAGCCACAACAAACAT+AGG | 0.571657 | 6.3:-53077938 | None:intergenic |
| CAATAGCATCACTAAACCAA+TGG | 0.573374 | 6.3:-53082068 | None:intergenic |
| TCATAACCACTTGAAGTTGG+TGG | 0.579347 | 6.3:-53077884 | None:intergenic |
| GCTGTTCCACCAACTTCAAG+TGG | 0.584755 | 6.3:+53077878 | MS.gene34568:CDS |
| TCAGAAGAAGGACCAAGCAA+AGG | 0.588996 | 6.3:-53078079 | None:intergenic |
| ATGCTATTGCGGGGTGAAAG+CGG | 0.592655 | 6.3:+53082082 | MS.gene34568:CDS |
| GGGAGAGATCTAGAGAGAGA+TGG | 0.610935 | 6.3:+53077824 | MS.gene34568:CDS |
| TCATGCATTTGGTTACACGC+TGG | 0.611101 | 6.3:+53079745 | MS.gene34568:CDS |
| AACCAAATTGAGGACGGGGA+AGG | 0.621571 | 6.3:-53081139 | None:intergenic |
| AACCAACCAAATTGAGGACG+GGG | 0.621889 | 6.3:-53081143 | None:intergenic |
| GAGATCTAGAGAGAGATGGT+GGG | 0.635728 | 6.3:+53077828 | MS.gene34568:CDS |
| CTAACCAACCAAATTGAGGA+CGG | 0.637433 | 6.3:-53081145 | None:intergenic |
| AAACCTTGTACTTAGACTTG+AGG | 0.651465 | 6.3:-53081196 | None:intergenic |
| TGAGCGAAATTGTCGACATG+TGG | 0.659405 | 6.3:-53081074 | None:intergenic |
| GGGGAAGGAGAATGAAACCA+AGG | 0.674315 | 6.3:-53081124 | None:intergenic |
| GAAGATGGGAGCCCTTAAGT+GGG | 0.681846 | 6.3:+53079684 | MS.gene34568:CDS |
| ATGTCAGGTAGTGACACCAA+TGG | 0.701971 | 6.3:-53082117 | None:intergenic |
| GGTTTAGTGATGCTATTGCG+GGG | 0.740371 | 6.3:+53082073 | MS.gene34568:CDS |
| GCTGTTGTGAATCATCACCA+AGG | 0.777652 | 6.3:+53079709 | MS.gene34568:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTGTGTTTTTTTTTT+TGG | + | chr6.3:53078115-53078134 | MS.gene34568:intron | 10.0% |
| !! | AATGACAAAAGAAAAATTAT+TGG | - | chr6.3:53080676-53080695 | None:intergenic | 15.0% |
| !! | AGTTAACAAAAATAAATAGT+TGG | - | chr6.3:53080645-53080664 | None:intergenic | 15.0% |
| !! | TAATATCATCGTTTAATAAT+AGG | - | chr6.3:53081578-53081597 | None:intergenic | 15.0% |
| !! | TTGATATAAAAATAAGATCA+AGG | - | chr6.3:53079528-53079547 | None:intergenic | 15.0% |
| !!! | AGTTAAATTGTTTTTGTATA+TGG | + | chr6.3:53078453-53078472 | MS.gene34568:intron | 15.0% |
| !!! | ATTTTACACAAATATAGTAA+TGG | + | chr6.3:53080071-53080090 | MS.gene34568:intron | 15.0% |
| !!! | TATTATTCATAAGTTTGTTA+AGG | + | chr6.3:53078207-53078226 | MS.gene34568:intron | 15.0% |
| !!! | TATTTTTATATCAATGACTT+AGG | + | chr6.3:53079534-53079553 | MS.gene34568:intron | 15.0% |
| !! | AAAACATGAAAAACAAAACA+TGG | - | chr6.3:53079229-53079248 | None:intergenic | 20.0% |
| !! | AAACATGAAAAACAAAACAT+GGG | - | chr6.3:53079228-53079247 | None:intergenic | 20.0% |
| !! | AATTGTCATTATCTATTGTT+AGG | + | chr6.3:53081944-53081963 | MS.gene34568:intron | 20.0% |
| !! | ACAACTAATGACAAAATTAT+AGG | - | chr6.3:53080745-53080764 | None:intergenic | 20.0% |
| !! | ACAATTTATAAAACCTCTAA+AGG | - | chr6.3:53081930-53081949 | None:intergenic | 20.0% |
| !! | ATCGTTTAATAATAGGAATT+TGG | - | chr6.3:53081571-53081590 | None:intergenic | 20.0% |
| !! | TATAAAAATAAGATCAAGGT+AGG | - | chr6.3:53079524-53079543 | None:intergenic | 20.0% |
| !! | TATCAAAAACTAATATGTAG+TGG | + | chr6.3:53079347-53079366 | MS.gene34568:intron | 20.0% |
| !! | TATCTATTGTTAGGAAAATA+AGG | + | chr6.3:53081953-53081972 | MS.gene34568:intron | 20.0% |
| !! | TCGTTTAATAATAGGAATTT+GGG | - | chr6.3:53081570-53081589 | None:intergenic | 20.0% |
| !! | TGATTAAACATCTTATATCT+GGG | + | chr6.3:53080921-53080940 | MS.gene34568:intron | 20.0% |
| !! | TTGATTAAACATCTTATATC+TGG | + | chr6.3:53080920-53080939 | MS.gene34568:intron | 20.0% |
| !! | TTTGTGTAAAATTCACTAAA+TGG | - | chr6.3:53080063-53080082 | None:intergenic | 20.0% |
| !!! | ATATGACATGAATTATTTTG+AGG | + | chr6.3:53080700-53080719 | MS.gene34568:intron | 20.0% |
| !!! | CAAATTTCCAACAAATTTTT+TGG | - | chr6.3:53080189-53080208 | None:intergenic | 20.0% |
| !!! | TACATATCTGCATTTTTTTT+TGG | - | chr6.3:53078851-53078870 | None:intergenic | 20.0% |
| !!! | TATGATTTTGTTTTAGCTTA+GGG | + | chr6.3:53078971-53078990 | MS.gene34568:intron | 20.0% |
| !!! | TTAGTGAAATTTTCAGTTTT+TGG | + | chr6.3:53079161-53079180 | MS.gene34568:intron | 20.0% |
| !!! | TTATGATTTTGTTTTAGCTT+AGG | + | chr6.3:53078970-53078989 | MS.gene34568:intron | 20.0% |
| ! | AATGTTATAGTACTTTGACT+TGG | + | chr6.3:53079081-53079100 | MS.gene34568:intron | 25.0% |
| ! | AATTTAAATGTGACCTTTAG+AGG | + | chr6.3:53081914-53081933 | MS.gene34568:intron | 25.0% |
| ! | ACCACATGTTAGTTAAATAA+AGG | + | chr6.3:53081818-53081837 | MS.gene34568:intron | 25.0% |
| ! | ATGTCAAATATCATCTATAG+TGG | - | chr6.3:53079952-53079971 | None:intergenic | 25.0% |
| ! | ATTAACATAAAAACCAGATC+AGG | - | chr6.3:53079064-53079083 | None:intergenic | 25.0% |
| ! | ATTAACTACACTCACTTTAT+TGG | - | chr6.3:53080371-53080390 | None:intergenic | 25.0% |
| ! | ATTTGTTTGGTTAAGTGAAT+TGG | + | chr6.3:53079477-53079496 | MS.gene34568:intron | 25.0% |
| ! | CATAAAATACAATTATGTCG+TGG | + | chr6.3:53078904-53078923 | MS.gene34568:intron | 25.0% |
| ! | CTAATCTTAAACAAAATCGA+AGG | - | chr6.3:53079441-53079460 | None:intergenic | 25.0% |
| ! | TCTCTACAATATCAATAATC+AGG | - | chr6.3:53078657-53078676 | None:intergenic | 25.0% |
| ! | TTAATAATAGGAATTTGGGA+CGG | - | chr6.3:53081566-53081585 | None:intergenic | 25.0% |
| ! | TTGTATTAAATAGCGTATTG+CGG | + | chr6.3:53079976-53079995 | MS.gene34568:intron | 25.0% |
| !! | ACGATTCGGAAAAAAATATT+TGG | + | chr6.3:53080831-53080850 | MS.gene34568:intron | 25.0% |
| !! | ATCAAAACCAAGATTTTTAC+TGG | - | chr6.3:53078002-53078021 | None:intergenic | 25.0% |
| !! | GAGTTACATGAAAATTTGTT+TGG | + | chr6.3:53079464-53079483 | MS.gene34568:intron | 25.0% |
| !! | TCAAAACCAAGATTTTTACT+GGG | - | chr6.3:53078001-53078020 | None:intergenic | 25.0% |
| !! | TCCTTTATTTAACTAACATG+TGG | - | chr6.3:53081822-53081841 | None:intergenic | 25.0% |
| !! | TTTTTGTATATGGTATAAGC+TGG | + | chr6.3:53078463-53078482 | MS.gene34568:intron | 25.0% |
| !!! | AGTAAAAATCTTGGTTTTGA+TGG | + | chr6.3:53078001-53078020 | MS.gene34568:CDS | 25.0% |
| !!! | ATGATTTTGTTTTAGCTTAG+GGG | + | chr6.3:53078972-53078991 | MS.gene34568:intron | 25.0% |
| !!! | CTTCGATTTTGTTTAAGATT+AGG | + | chr6.3:53079439-53079458 | MS.gene34568:intron | 25.0% |
| AAAAATGAGTCAATCCAATC+AGG | + | chr6.3:53078326-53078345 | MS.gene34568:intron | 30.0% | |
| AACAGCTTATTTGTAGCTTA+AGG | + | chr6.3:53078392-53078411 | MS.gene34568:intron | 30.0% | |
| AATAAGCTGTTTATCCAAAC+AGG | - | chr6.3:53078383-53078402 | None:intergenic | 30.0% | |
| AATTGTCCCAGTAAAAATCT+TGG | + | chr6.3:53077992-53078011 | MS.gene34568:CDS | 30.0% | |
| ACACAAATAAGAATCCATAC+AGG | + | chr6.3:53078605-53078624 | MS.gene34568:intron | 30.0% | |
| ACCCGAATTGTATAAAAGTT+CGG | + | chr6.3:53081465-53081484 | MS.gene34568:intron | 30.0% | |
| ACCTACAAGATACAGAAAAA+TGG | - | chr6.3:53080996-53081015 | None:intergenic | 30.0% | |
| ACTAAACAGGGTTTAAACAA+AGG | - | chr6.3:53079392-53079411 | None:intergenic | 30.0% | |
| AGCAATACCAAAATCATCAA+AGG | - | chr6.3:53078353-53078372 | None:intergenic | 30.0% | |
| AGGTTTACCAATATGTTCTA+TGG | + | chr6.3:53081213-53081232 | MS.gene34568:CDS | 30.0% | |
| ATAACTGAGTATCAGAGAAA+TGG | - | chr6.3:53080885-53080904 | None:intergenic | 30.0% | |
| ATAAGATTCTGTTGACGATT+CGG | + | chr6.3:53080817-53080836 | MS.gene34568:intron | 30.0% | |
| ATAAGCTGTTTATCCAAACA+GGG | - | chr6.3:53078382-53078401 | None:intergenic | 30.0% | |
| ATACAACCCATAGAACATAT+TGG | - | chr6.3:53081223-53081242 | None:intergenic | 30.0% | |
| ATCATGAATAGTCCTAAACA+AGG | - | chr6.3:53081365-53081384 | None:intergenic | 30.0% | |
| ATTGTCATCAATCTTGTGAT+TGG | + | chr6.3:53081044-53081063 | MS.gene34568:CDS | 30.0% | |
| CAAACACTTGACTGAATATT+AGG | + | chr6.3:53081602-53081621 | MS.gene34568:intron | 30.0% | |
| CATTAGCAACATAACTGTTA+GGG | + | chr6.3:53081287-53081306 | MS.gene34568:intron | 30.0% | |
| CTAATATTCAGTCAAGTGTT+TGG | - | chr6.3:53081604-53081623 | None:intergenic | 30.0% | |
| CTATTGTTAGGAAAATAAGG+TGG | + | chr6.3:53081956-53081975 | MS.gene34568:intron | 30.0% | |
| CTTGTACACATAAATTCATC+AGG | - | chr6.3:53080145-53080164 | None:intergenic | 30.0% | |
| GAGATTCATCTTAGTGAATT+GGG | - | chr6.3:53080585-53080604 | None:intergenic | 30.0% | |
| GCATGATTATCTACTAAACA+GGG | - | chr6.3:53079404-53079423 | None:intergenic | 30.0% | |
| GGTTTACCAATATGTTCTAT+GGG | + | chr6.3:53081214-53081233 | MS.gene34568:CDS | 30.0% | |
| GTATCTAATGTGTATCATTC+TGG | + | chr6.3:53080536-53080555 | MS.gene34568:intron | 30.0% | |
| GTTGTGACCAAAAAATTTGT+TGG | + | chr6.3:53080179-53080198 | MS.gene34568:intron | 30.0% | |
| TAACAGTTATGTTGCTAATG+AGG | - | chr6.3:53081287-53081306 | None:intergenic | 30.0% | |
| TCAGATATGAGTATCTAAAC+AGG | - | chr6.3:53079561-53079580 | None:intergenic | 30.0% | |
| TCATGAATAGTCCTAAACAA+GGG | - | chr6.3:53081364-53081383 | None:intergenic | 30.0% | |
| TCATTAGCAACATAACTGTT+AGG | + | chr6.3:53081286-53081305 | MS.gene34568:intron | 30.0% | |
| TGCATGATTATCTACTAAAC+AGG | - | chr6.3:53079405-53079424 | None:intergenic | 30.0% | |
| TGGTTAAGTGAATTGGATAT+GGG | + | chr6.3:53079484-53079503 | MS.gene34568:intron | 30.0% | |
| TGGTTTAGTGAATTGGATTT+GGG | + | chr6.3:53079015-53079034 | MS.gene34568:intron | 30.0% | |
| TTGGTTAAGTGAATTGGATA+TGG | + | chr6.3:53079483-53079502 | MS.gene34568:intron | 30.0% | |
| ! | ACCGAACTTTTATACAATTC+GGG | - | chr6.3:53081469-53081488 | None:intergenic | 30.0% |
| ! | ATTTGTCTGGTTTAGTGAAT+TGG | + | chr6.3:53079008-53079027 | MS.gene34568:intron | 30.0% |
| ! | CACCGAACTTTTATACAATT+CGG | - | chr6.3:53081470-53081489 | None:intergenic | 30.0% |
| ! | CTAAACCAGACAAATTTTCA+TGG | - | chr6.3:53079003-53079022 | None:intergenic | 30.0% |
| ! | CTTCACAGTTTGATTCTTTT+CGG | - | chr6.3:53081655-53081674 | None:intergenic | 30.0% |
| ! | CTTTTACCAAACTGTTGTAA+TGG | - | chr6.3:53081416-53081435 | None:intergenic | 30.0% |
| ! | GTTTAGGACTATTCATGATT+CGG | + | chr6.3:53081366-53081385 | MS.gene34568:intron | 30.0% |
| !! | ACCATTTTTCTGTATCTTGT+AGG | + | chr6.3:53080992-53081011 | MS.gene34568:intron | 30.0% |
| !! | ATGATTTTGGTATTGCTTTC+AGG | + | chr6.3:53078356-53078375 | MS.gene34568:intron | 30.0% |
| !! | ATTAGATACTCGTATCGATT+AGG | - | chr6.3:53080525-53080544 | None:intergenic | 30.0% |
| !! | CGATTTTGTTTAAGATTAGG+AGG | + | chr6.3:53079442-53079461 | MS.gene34568:intron | 30.0% |
| !! | TTTTGAAGACTAACGAAGAT+GGG | + | chr6.3:53079670-53079689 | MS.gene34568:intron | 30.0% |
| !! | TTTTTGAAGACTAACGAAGA+TGG | + | chr6.3:53079669-53079688 | MS.gene34568:intron | 30.0% |
| !!! | CTTGTGTTTTGAAGTTTCTT+GGG | + | chr6.3:53078026-53078045 | MS.gene34568:CDS | 30.0% |
| AAACCTTGTACTTAGACTTG+AGG | - | chr6.3:53081199-53081218 | None:intergenic | 35.0% | |
| AAATCATCAAAGGACCTGAT+TGG | - | chr6.3:53078343-53078362 | None:intergenic | 35.0% | |
| ACTCCAGTTTGTGATAAGTT+CGG | - | chr6.3:53080341-53080360 | None:intergenic | 35.0% | |
| ACTGAACCATTACAACAGTT+TGG | + | chr6.3:53081407-53081426 | MS.gene34568:intron | 35.0% | |
| ACTGTTGTAATGGTTCAGTT+TGG | - | chr6.3:53081406-53081425 | None:intergenic | 35.0% | |
| AGCAAAGGATTCTCTTTCAA+AGG | - | chr6.3:53078067-53078086 | None:intergenic | 35.0% | |
| ATAAATTAGCCCACCTAAAC+TGG | - | chr6.3:53078793-53078812 | None:intergenic | 35.0% | |
| ATTCGCCTTGAACAACAATT+TGG | + | chr6.3:53079814-53079833 | MS.gene34568:CDS | 35.0% | |
| ATTTGTAGCTTAAGGCACAA+GGG | + | chr6.3:53078400-53078419 | MS.gene34568:intron | 35.0% | |
| CAATAGCATCACTAAACCAA+TGG | - | chr6.3:53082071-53082090 | None:intergenic | 35.0% | |
| CATGTGTTCCAACTTCTAAA+TGG | + | chr6.3:53082137-53082156 | MS.gene34568:CDS | 35.0% | |
| CGAAAAGAATCAAACTGTGA+AGG | + | chr6.3:53081653-53081672 | MS.gene34568:intron | 35.0% | |
| CGAGATTCATCTTAGTGAAT+TGG | - | chr6.3:53080586-53080605 | None:intergenic | 35.0% | |
| CTAAACTGACTAAACTGTGA+CGG | - | chr6.3:53081715-53081734 | None:intergenic | 35.0% | |
| CTGGTTTAGTGAATTGGATT+TGG | + | chr6.3:53079014-53079033 | MS.gene34568:intron | 35.0% | |
| GGTAAAAGCTGAACTGTTAA+TGG | + | chr6.3:53081428-53081447 | MS.gene34568:intron | 35.0% | |
| GGTTAAGTGAATTGGATATG+GGG | + | chr6.3:53079485-53079504 | MS.gene34568:intron | 35.0% | |
| GGTTTAGTGAATTGGATTTG+GGG | + | chr6.3:53079016-53079035 | MS.gene34568:intron | 35.0% | |
| GTTAGCAGTAAAAGTAGTTC+AGG | - | chr6.3:53081519-53081538 | None:intergenic | 35.0% | |
| GTTATGATCCAGAAACTAGT+TGG | + | chr6.3:53077900-53077919 | MS.gene34568:CDS | 35.0% | |
| GTTTACCTAGTATCTGGATT+TGG | + | chr6.3:53080226-53080245 | MS.gene34568:CDS | 35.0% | |
| GTTTAGTGAATTGGATTTGG+GGG | + | chr6.3:53079017-53079036 | MS.gene34568:intron | 35.0% | |
| TAGTACGGTAGCATAGATTT+AGG | + | chr6.3:53079611-53079630 | MS.gene34568:intron | 35.0% | |
| TATTTGTAGCTTAAGGCACA+AGG | + | chr6.3:53078399-53078418 | MS.gene34568:intron | 35.0% | |
| TCGCATTTCCATTTAGAAGT+TGG | - | chr6.3:53082148-53082167 | None:intergenic | 35.0% | |
| TGGTTCCATGAAAATTTGTC+TGG | + | chr6.3:53078995-53079014 | MS.gene34568:intron | 35.0% | |
| TTCGCCTTGAACAACAATTT+GGG | + | chr6.3:53079815-53079834 | MS.gene34568:CDS | 35.0% | |
| TTGAAAGAGAATCCTTTGCT+TGG | + | chr6.3:53078067-53078086 | MS.gene34568:CDS | 35.0% | |
| TTGAATGGTAGGTTATCCAT+TGG | + | chr6.3:53082052-53082071 | MS.gene34568:intron | 35.0% | |
| TTGGTTTAGTGATGCTATTG+CGG | + | chr6.3:53082071-53082090 | MS.gene34568:CDS | 35.0% | |
| TTTCCGAACTTATCACAAAC+TGG | + | chr6.3:53080335-53080354 | MS.gene34568:CDS | 35.0% | |
| TTTGTTGGAAATTTGCAGTG+AGG | + | chr6.3:53080194-53080213 | MS.gene34568:intron | 35.0% | |
| ! | AAAGTAGTTCAGGTTAGGTT+CGG | - | chr6.3:53081509-53081528 | None:intergenic | 35.0% |
| ! | AGATTAGCCACAACAAACAT+AGG | - | chr6.3:53077941-53077960 | None:intergenic | 35.0% |
| ! | CACTGTATTCGTTTGTTGAA+TGG | + | chr6.3:53082037-53082056 | MS.gene34568:intron | 35.0% |
| ! | CAGTAAAAGTAGTTCAGGTT+AGG | - | chr6.3:53081514-53081533 | None:intergenic | 35.0% |
| ! | CTTGAACAACAATTTGGGTT+CGG | + | chr6.3:53079820-53079839 | MS.gene34568:CDS | 35.0% |
| ! | CTTTTAGTCGAAAACTGTCA+TGG | + | chr6.3:53079299-53079318 | MS.gene34568:intron | 35.0% |
| ! | GCTTATACCTATGTTTGTTG+TGG | + | chr6.3:53077931-53077950 | MS.gene34568:CDS | 35.0% |
| ! | GTATTCGTTTGTTGAATGGT+AGG | + | chr6.3:53082041-53082060 | MS.gene34568:intron | 35.0% |
| ! | TAAACCAGTAACCCTTGTTT+AGG | + | chr6.3:53081350-53081369 | MS.gene34568:intron | 35.0% |
| ! | TGGTTTAACGGTTCAGTTTT+TGG | + | chr6.3:53081751-53081770 | MS.gene34568:intron | 35.0% |
| !! | ATCAGGTCCTTTGATGATTT+TGG | + | chr6.3:53078343-53078362 | MS.gene34568:intron | 35.0% |
| !! | ATTAGAAAAAGCATCTCCGT+TGG | + | chr6.3:53080274-53080293 | MS.gene34568:CDS | 35.0% |
| !! | TCAGTTTAGTCTTTTCAGTG+CGG | + | chr6.3:53081726-53081745 | MS.gene34568:intron | 35.0% |
| !! | TTTAGGTGGGCTAATTTATC+CGG | + | chr6.3:53078794-53078813 | MS.gene34568:intron | 35.0% |
| !!! | ATTTTGTTTTAGCTTAGGGG+TGG | + | chr6.3:53078975-53078994 | MS.gene34568:intron | 35.0% |
| !!! | GCTTGTGTTTTGAAGTTTCT+TGG | + | chr6.3:53078025-53078044 | MS.gene34568:CDS | 35.0% |
| !!! | TTCACGAGTTCAGTTTTGTT+CGG | - | chr6.3:53081689-53081708 | None:intergenic | 35.0% |
| AACCAAGGAGAAATCCTGTT+AGG | - | chr6.3:53081112-53081131 | None:intergenic | 40.0% | |
| AACCCTTACGTTTCAGAAGA+AGG | - | chr6.3:53078094-53078113 | None:intergenic | 40.0% | |
| AAGAATCCATACAGGCTAGT+TGG | + | chr6.3:53078613-53078632 | MS.gene34568:intron | 40.0% | |
| ACACGCTGGAATCATTCATT+TGG | + | chr6.3:53079759-53079778 | MS.gene34568:CDS | 40.0% | |
| ACCGTACTACACAAGAATTC+AGG | - | chr6.3:53079600-53079619 | None:intergenic | 40.0% | |
| AGATATGTAGCTAACCCACT+TGG | + | chr6.3:53078692-53078711 | MS.gene34568:intron | 40.0% | |
| ATAGTGGCACTAAAGTGTAG+CGG | - | chr6.3:53079936-53079955 | None:intergenic | 40.0% | |
| ATTCGAGAAAGGAACTTACC+AGG | - | chr6.3:53081264-53081283 | None:intergenic | 40.0% | |
| CACAGAGCGATAATTAGACA+TGG | - | chr6.3:53080409-53080428 | None:intergenic | 40.0% | |
| CAGAAACTAGTTGGACATCA+TGG | + | chr6.3:53077909-53077928 | MS.gene34568:CDS | 40.0% | |
| CCTTTCAGTGTCGTCAATTA+CGG | + | chr6.3:53079881-53079900 | MS.gene34568:intron | 40.0% | |
| CTAACCAACCAAATTGAGGA+CGG | - | chr6.3:53081148-53081167 | None:intergenic | 40.0% | |
| GACAATTTCGCTCATATTGG+CGG | + | chr6.3:53081083-53081102 | MS.gene34568:CDS | 40.0% | |
| GATATGTAGCTAACCCACTT+GGG | + | chr6.3:53078693-53078712 | MS.gene34568:intron | 40.0% | |
| GCCTGAATTCTTGTGTAGTA+CGG | + | chr6.3:53079596-53079615 | MS.gene34568:intron | 40.0% | |
| GGAATCGTTTACCTAGTATC+TGG | + | chr6.3:53080220-53080239 | MS.gene34568:CDS | 40.0% | |
| GGATCATAACCACTTGAAGT+TGG | - | chr6.3:53077890-53077909 | None:intergenic | 40.0% | |
| GGTAAATAAGCTTTGCAGAC+AGG | - | chr6.3:53080124-53080143 | None:intergenic | 40.0% | |
| GTCGACAATTTCGCTCATAT+TGG | + | chr6.3:53081080-53081099 | MS.gene34568:CDS | 40.0% | |
| TAACCAACCAAATTGAGGAC+GGG | - | chr6.3:53081147-53081166 | None:intergenic | 40.0% | |
| TACCTAGTATCTGGATTTGG+TGG | + | chr6.3:53080229-53080248 | MS.gene34568:CDS | 40.0% | |
| TAGAAGTTGGAACACATGTC+AGG | - | chr6.3:53082135-53082154 | None:intergenic | 40.0% | |
| TAGTCCTAAACAAGGGTTAC+TGG | - | chr6.3:53081357-53081376 | None:intergenic | 40.0% | |
| TCATAACCACTTGAAGTTGG+TGG | - | chr6.3:53077887-53077906 | None:intergenic | 40.0% | |
| TCCCTCTACTTTACTGAACA+AGG | - | chr6.3:53081318-53081337 | None:intergenic | 40.0% | |
| TGCTAATGAGGATTCGAGAA+AGG | - | chr6.3:53081275-53081294 | None:intergenic | 40.0% | |
| TGGAAATTTGCAGTGAGGAT+AGG | + | chr6.3:53080199-53080218 | MS.gene34568:intron | 40.0% | |
| TGGTTTAGTGATGCTATTGC+GGG | + | chr6.3:53082072-53082091 | MS.gene34568:CDS | 40.0% | |
| TGTCATGGCAGTCTTAAATG+TGG | + | chr6.3:53079314-53079333 | MS.gene34568:intron | 40.0% | |
| TGTGATAAGTTCGGAAAGCA+TGG | - | chr6.3:53080332-53080351 | None:intergenic | 40.0% | |
| TGTTCAGTAAAGTAGAGGGA+GGG | + | chr6.3:53081318-53081337 | MS.gene34568:intron | 40.0% | |
| TTACGGATCGGTGAAAATAG+CGG | + | chr6.3:53079898-53079917 | MS.gene34568:intron | 40.0% | |
| TTCCTAACAGGATTTCTCCT+TGG | + | chr6.3:53081107-53081126 | MS.gene34568:CDS | 40.0% | |
| TTGTGAATCATCACCAAGGA+TGG | + | chr6.3:53079713-53079732 | MS.gene34568:CDS | 40.0% | |
| TTGTTCAGTAAAGTAGAGGG+AGG | + | chr6.3:53081317-53081336 | MS.gene34568:intron | 40.0% | |
| ! | AAGAAGTCCAAAAAGAGCAC+CGG | - | chr6.3:53080305-53080324 | None:intergenic | 40.0% |
| ! | AATTTATCCGGTGCCAGTTT+AGG | + | chr6.3:53078806-53078825 | MS.gene34568:intron | 40.0% |
| ! | ACCTAGTATCTGGATTTGGT+GGG | + | chr6.3:53080230-53080249 | MS.gene34568:CDS | 40.0% |
| ! | ATGATCAGTCTGGTCTTCAT+TGG | + | chr6.3:53079790-53079809 | MS.gene34568:CDS | 40.0% |
| ! | CATGATGTCCAACTAGTTTC+TGG | - | chr6.3:53077911-53077930 | None:intergenic | 40.0% |
| ! | CGAACCCAAATTGTTGTTCA+AGG | - | chr6.3:53079822-53079841 | None:intergenic | 40.0% |
| ! | GCCTTGTTCAGTAAAGTAGA+GGG | + | chr6.3:53081314-53081333 | MS.gene34568:intron | 40.0% |
| ! | TTGGATTCACGCTTTGAATC+TGG | + | chr6.3:53080850-53080869 | MS.gene34568:intron | 40.0% |
| !! | AAATCGAAGGCACTTCTACT+AGG | - | chr6.3:53079428-53079447 | None:intergenic | 40.0% |
| !! | AGCCTTGTTCAGTAAAGTAG+AGG | + | chr6.3:53081313-53081332 | MS.gene34568:intron | 40.0% |
| !! | ATTCATGATTCGGTTCAGGT+AGG | + | chr6.3:53081376-53081395 | MS.gene34568:intron | 40.0% |
| !! | GACTATTCATGATTCGGTTC+AGG | + | chr6.3:53081372-53081391 | MS.gene34568:intron | 40.0% |
| !! | GTCCTTCTTCTGAAACGTAA+GGG | + | chr6.3:53078089-53078108 | MS.gene34568:intron | 40.0% |
| !! | TGTATAAAAGTTCGGTGCAC+CGG | + | chr6.3:53081473-53081492 | MS.gene34568:intron | 40.0% |
| !! | TTAGTCTTTTCAGTGCGGTT+TGG | + | chr6.3:53081731-53081750 | MS.gene34568:intron | 40.0% |
| !! | TTCAGTGCGGTTTGGTTTAA+CGG | + | chr6.3:53081739-53081758 | MS.gene34568:intron | 40.0% |
| AACCAACCAAATTGAGGACG+GGG | - | chr6.3:53081146-53081165 | None:intergenic | 45.0% | |
| ACCAGTGTTGTCAAATAGCG+AGG | - | chr6.3:53080039-53080058 | None:intergenic | 45.0% | |
| ACTCGCGTTATAACACGAGT+TGG | - | chr6.3:53081787-53081806 | None:intergenic | 45.0% | |
| AGAGATCTAGAGAGAGATGG+TGG | + | chr6.3:53077827-53077846 | MS.gene34568:CDS | 45.0% | |
| ATAGCGAGGCTATAGTGAAG+CGG | - | chr6.3:53080025-53080044 | None:intergenic | 45.0% | |
| ATATGTAGTGGCCAAGATCG+TGG | + | chr6.3:53079359-53079378 | MS.gene34568:intron | 45.0% | |
| ATGAGACAAGTCTCCATCCT+TGG | - | chr6.3:53079729-53079748 | None:intergenic | 45.0% | |
| ATGTCAGGTAGTGACACCAA+TGG | - | chr6.3:53082120-53082139 | None:intergenic | 45.0% | |
| CACAACAGCATCCCACTTAA+GGG | - | chr6.3:53079698-53079717 | None:intergenic | 45.0% | |
| CAGTGTCGTCAATTACGGAT+CGG | + | chr6.3:53079886-53079905 | MS.gene34568:intron | 45.0% | |
| CCGTAATTGACGACACTGAA+AGG | - | chr6.3:53079884-53079903 | None:intergenic | 45.0% | |
| CTATAATTGCAATCGCGCTC+TGG | + | chr6.3:53078872-53078891 | MS.gene34568:intron | 45.0% | |
| GAGATCTAGAGAGAGATGGT+GGG | + | chr6.3:53077828-53077847 | MS.gene34568:CDS | 45.0% | |
| GATCACAAGCCAATACCACT+AGG | - | chr6.3:53078723-53078742 | None:intergenic | 45.0% | |
| GCTGTTGTGAATCATCACCA+AGG | + | chr6.3:53079709-53079728 | MS.gene34568:CDS | 45.0% | |
| GGAGACTTGTCTCATGCATT+TGG | + | chr6.3:53079734-53079753 | MS.gene34568:CDS | 45.0% | |
| GGTTTAGTGATGCTATTGCG+GGG | + | chr6.3:53082073-53082092 | MS.gene34568:CDS | 45.0% | |
| GTTGGAAACCATCATAGCTG+CGG | + | chr6.3:53078631-53078650 | MS.gene34568:intron | 45.0% | |
| TAGGTTCGGAAACACAGAAC+CGG | - | chr6.3:53081495-53081514 | None:intergenic | 45.0% | |
| TATTGCTTTCAGGCCCTGTT+TGG | + | chr6.3:53078366-53078385 | MS.gene34568:intron | 45.0% | |
| TCACAACAGCATCCCACTTA+AGG | - | chr6.3:53079699-53079718 | None:intergenic | 45.0% | |
| TCAGAAGAAGGACCAAGCAA+AGG | - | chr6.3:53078082-53078101 | None:intergenic | 45.0% | |
| TCATGCATTTGGTTACACGC+TGG | + | chr6.3:53079745-53079764 | MS.gene34568:CDS | 45.0% | |
| TCCCACCAAATCCAGATACT+AGG | - | chr6.3:53080234-53080253 | None:intergenic | 45.0% | |
| TCGCCTCAAGTCTAAGTACA+AGG | + | chr6.3:53081193-53081212 | MS.gene34568:CDS | 45.0% | |
| TGAGCGAAATTGTCGACATG+TGG | - | chr6.3:53081077-53081096 | None:intergenic | 45.0% | |
| TGCGCTAACCAACCAAATTG+AGG | - | chr6.3:53081152-53081171 | None:intergenic | 45.0% | |
| TGGGACGGTTCAGTTCAAAA+AGG | - | chr6.3:53081551-53081570 | None:intergenic | 45.0% | |
| ! | CTCTCGTACTATTGATTGCC+TGG | + | chr6.3:53081243-53081262 | MS.gene34568:CDS | 45.0% |
| ! | GCTGGTTTCGTAAGCTATCA+TGG | + | chr6.3:53078481-53078500 | MS.gene34568:intron | 45.0% |
| ! | GGTGCTCTTTTTGGACTTCT+TGG | + | chr6.3:53080304-53080323 | MS.gene34568:CDS | 45.0% |
| ! | TGGTTTCCAACTAGCCTGTA+TGG | - | chr6.3:53078622-53078641 | None:intergenic | 45.0% |
| !! | AGTGGTATTGGCTTGTGATC+TGG | + | chr6.3:53078723-53078742 | MS.gene34568:intron | 45.0% |
| !! | CATATTGGCGGATTCCTAAC+AGG | + | chr6.3:53081095-53081114 | MS.gene34568:CDS | 45.0% |
| !! | GGTCCTTCTTCTGAAACGTA+AGG | + | chr6.3:53078088-53078107 | MS.gene34568:intron | 45.0% |
| !! | GTGGTATTGGCTTGTGATCT+GGG | + | chr6.3:53078724-53078743 | MS.gene34568:intron | 45.0% |
| AACCAAATTGAGGACGGGGA+AGG | - | chr6.3:53081142-53081161 | None:intergenic | 50.0% | |
| AACCAGATCAGGACTGAACC+AGG | - | chr6.3:53079053-53079072 | None:intergenic | 50.0% | |
| AAGGTCAGCAACCACGATCT+TGG | - | chr6.3:53079373-53079392 | None:intergenic | 50.0% | |
| ATGCTATTGCGGGGTGAAAG+CGG | + | chr6.3:53082082-53082101 | MS.gene34568:CDS | 50.0% | |
| CAATTATGTCGTGGCCCAGA+TGG | + | chr6.3:53078913-53078932 | MS.gene34568:intron | 50.0% | |
| GAAGATGGGAGCCCTTAAGT+GGG | + | chr6.3:53079684-53079703 | MS.gene34568:CDS | 50.0% | |
| GAATCGAACCTGAGACCTCA+AGG | - | chr6.3:53078761-53078780 | None:intergenic | 50.0% | |
| GCCTCGCTATTTGACAACAC+TGG | + | chr6.3:53080035-53080054 | MS.gene34568:intron | 50.0% | |
| GCTGTTCCACCAACTTCAAG+TGG | + | chr6.3:53077878-53077897 | MS.gene34568:CDS | 50.0% | |
| GGACTGAACCAGGAAAAACC+AGG | - | chr6.3:53079043-53079062 | None:intergenic | 50.0% | |
| GGCAGCAAACATGATCAGTC+TGG | + | chr6.3:53079780-53079799 | MS.gene34568:CDS | 50.0% | |
| GGGAGAGATCTAGAGAGAGA+TGG | + | chr6.3:53077824-53077843 | MS.gene34568:CDS | 50.0% | |
| GGGGAAGGAGAATGAAACCA+AGG | - | chr6.3:53081127-53081146 | None:intergenic | 50.0% | |
| GTCTCAGGTTCGATTCTCTC+CGG | + | chr6.3:53078765-53078784 | MS.gene34568:intron | 50.0% | |
| TAATCAGGCCGCAGCTATGA+TGG | - | chr6.3:53078642-53078661 | None:intergenic | 50.0% | |
| TGTAGCTAACCCACTTGGGT+TGG | + | chr6.3:53078697-53078716 | MS.gene34568:intron | 50.0% | |
| TTCCCCGTCCTCAATTTGGT+TGG | + | chr6.3:53081141-53081160 | MS.gene34568:CDS | 50.0% | |
| TTCCTGGTTCAGTCCTGATC+TGG | + | chr6.3:53079048-53079067 | MS.gene34568:intron | 50.0% | |
| ! | ATTCTCTCCGGTGCCAGTTT+AGG | + | chr6.3:53078777-53078796 | MS.gene34568:intron | 50.0% |
| ! | TATCCGGTGCCAGTTTAGGT+GGG | + | chr6.3:53078810-53078829 | MS.gene34568:intron | 50.0% |
| ! | TTATCCGGTGCCAGTTTAGG+TGG | + | chr6.3:53078809-53078828 | MS.gene34568:intron | 50.0% |
| !! | TTGGGTTGGCCTAGTGGTAT+TGG | + | chr6.3:53078711-53078730 | MS.gene34568:intron | 50.0% |
| AAACGTTCGCAACCGCCATC+TGG | - | chr6.3:53078948-53078967 | None:intergenic | 55.0% | |
| AACGTTCGCAACCGCCATCT+GGG | - | chr6.3:53078947-53078966 | None:intergenic | 55.0% | |
| ACCACTAGGCCAACCCAAGT+GGG | - | chr6.3:53078709-53078728 | None:intergenic | 55.0% | |
| CGAAGATGGGAGCCCTTAAG+TGG | + | chr6.3:53079683-53079702 | MS.gene34568:CDS | 55.0% | |
| CTCCTTCCCCGTCCTCAATT+TGG | + | chr6.3:53081137-53081156 | MS.gene34568:CDS | 55.0% | |
| GGTAGTGACACCAATGGCAG+TGG | - | chr6.3:53082114-53082133 | None:intergenic | 55.0% | |
| GTGAATTGGATTTGGGGGCC+TGG | + | chr6.3:53079022-53079041 | MS.gene34568:intron | 55.0% | |
| TACCACTAGGCCAACCCAAG+TGG | - | chr6.3:53078710-53078729 | None:intergenic | 55.0% | |
| TAGCCCACCTAAACTGGCAC+CGG | - | chr6.3:53078787-53078806 | None:intergenic | 55.0% | |
| TCGAACCTGAGACCTCAAGG+AGG | - | chr6.3:53078758-53078777 | None:intergenic | 55.0% | |
| TTATGTCGTGGCCCAGATGG+CGG | + | chr6.3:53078916-53078935 | MS.gene34568:intron | 55.0% | |
| ! | AGCATCTCCGTTGGTGCTTC+CGG | + | chr6.3:53080283-53080302 | MS.gene34568:CDS | 55.0% |
| ! | GGTGCTTCCGGTGCTCTTTT+TGG | + | chr6.3:53080295-53080314 | MS.gene34568:CDS | 55.0% |
| ! | TCTCCGGTGCCAGTTTAGGT+GGG | + | chr6.3:53078781-53078800 | MS.gene34568:intron | 55.0% |
| !! | AAGAGCACCGGAAGCACCAA+CGG | - | chr6.3:53080293-53080312 | None:intergenic | 55.0% |
| !! | TTTGGGGGCCTGGTTTTTCC+TGG | + | chr6.3:53079032-53079051 | MS.gene34568:intron | 55.0% |
| GACTTGAGGCGAACACCAGC+AGG | - | chr6.3:53081185-53081204 | None:intergenic | 60.0% | |
| GCGGATACGACCACTGCCAT+TGG | + | chr6.3:53082101-53082120 | MS.gene34568:CDS | 60.0% | |
| GTGCTCCTCCTTGAGGTCTC+AGG | + | chr6.3:53078750-53078769 | MS.gene34568:intron | 60.0% | |
| ! | CTCTCCGGTGCCAGTTTAGG+TGG | + | chr6.3:53078780-53078799 | MS.gene34568:intron | 60.0% |
| ! | TGGGAGTGTGCTCCTCCTTG+AGG | + | chr6.3:53078743-53078762 | MS.gene34568:intron | 60.0% |
| !! | ACCCACTTGGGTTGGCCTAG+TGG | + | chr6.3:53078705-53078724 | MS.gene34568:intron | 60.0% |
| ATCTGGGCGCAACCGCCATC+TGG | - | chr6.3:53078931-53078950 | None:intergenic | 65.0% | |
| GCGCAGCGACATGTTCCTGC+TGG | + | chr6.3:53081167-53081186 | MS.gene34568:CDS | 65.0% | |
| TCTGGGCGCAACCGCCATCT+GGG | - | chr6.3:53078930-53078949 | None:intergenic | 65.0% | |
| ! | AGATGGCGGTTGCGCCCAGA+TGG | + | chr6.3:53078930-53078949 | MS.gene34568:intron | 65.0% |
| TGGCGGTTGCGCCCAGATGG+CGG | + | chr6.3:53078933-53078952 | MS.gene34568:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 53077818 | 53082177 | 53077818 | ID=MS.gene34568 |
| chr6.3 | mRNA | 53077818 | 53082177 | 53077818 | ID=MS.gene34568.t1;Parent=MS.gene34568 |
| chr6.3 | exon | 53077818 | 53078104 | 53077818 | ID=MS.gene34568.t1.exon1;Parent=MS.gene34568.t1 |
| chr6.3 | CDS | 53077818 | 53078104 | 53077818 | ID=cds.MS.gene34568.t1;Parent=MS.gene34568.t1 |
| chr6.3 | exon | 53079678 | 53079841 | 53079678 | ID=MS.gene34568.t1.exon2;Parent=MS.gene34568.t1 |
| chr6.3 | CDS | 53079678 | 53079841 | 53079678 | ID=cds.MS.gene34568.t1;Parent=MS.gene34568.t1 |
| chr6.3 | exon | 53080212 | 53080375 | 53080212 | ID=MS.gene34568.t1.exon3;Parent=MS.gene34568.t1 |
| chr6.3 | CDS | 53080212 | 53080375 | 53080212 | ID=cds.MS.gene34568.t1;Parent=MS.gene34568.t1 |
| chr6.3 | exon | 53081014 | 53081264 | 53081014 | ID=MS.gene34568.t1.exon4;Parent=MS.gene34568.t1 |
| chr6.3 | CDS | 53081014 | 53081264 | 53081014 | ID=cds.MS.gene34568.t1;Parent=MS.gene34568.t1 |
| chr6.3 | exon | 53082063 | 53082177 | 53082063 | ID=MS.gene34568.t1.exon5;Parent=MS.gene34568.t1 |
| chr6.3 | CDS | 53082063 | 53082177 | 53082063 | ID=cds.MS.gene34568.t1;Parent=MS.gene34568.t1 |
| Gene Sequence |
| Protein sequence |
