Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34854.t1 | XP_003628621.2 | 95.1 | 123 | 6 | 0 | 1 | 123 | 559 | 681 | 2.10E-59 | 238.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34854.t1 | O48686 | 74.8 | 123 | 31 | 0 | 1 | 123 | 497 | 619 | 1.0e-49 | 198.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34854.t1 | G7LEQ2 | 95.1 | 123 | 6 | 0 | 1 | 123 | 559 | 681 | 1.5e-59 | 238.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050020 | MS.gene34854 | 0.813291 | 2.76E-51 | -1.69E-46 |
| MS.gene050807 | MS.gene34854 | 0.826632 | 2.44E-54 | -1.69E-46 |
| MS.gene051180 | MS.gene34854 | 0.801829 | 7.49E-49 | -1.69E-46 |
| MS.gene052323 | MS.gene34854 | 0.831583 | 1.54E-55 | -1.69E-46 |
| MS.gene052665 | MS.gene34854 | 0.816111 | 6.54E-52 | -1.69E-46 |
| MS.gene053565 | MS.gene34854 | 0.821673 | 3.56E-53 | -1.69E-46 |
| MS.gene05462 | MS.gene34854 | 0.81622 | 6.19E-52 | -1.69E-46 |
| MS.gene056643 | MS.gene34854 | 0.819085 | 1.40E-52 | -1.69E-46 |
| MS.gene056760 | MS.gene34854 | 0.808552 | 2.93E-50 | -1.69E-46 |
| MS.gene057869 | MS.gene34854 | 0.846454 | 2.15E-59 | -1.69E-46 |
| MS.gene059713 | MS.gene34854 | 0.813856 | 2.07E-51 | -1.69E-46 |
| MS.gene059725 | MS.gene34854 | 0.802404 | 5.70E-49 | -1.69E-46 |
| MS.gene05978 | MS.gene34854 | 0.805371 | 1.38E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34854.t1 | MTR_8g062700 | 95.122 | 123 | 6 | 0 | 1 | 123 | 558 | 680 | 2.40e-76 | 249 |
| MS.gene34854.t1 | MTR_8g062700 | 95.122 | 123 | 6 | 0 | 1 | 123 | 559 | 681 | 2.41e-76 | 249 |
| MS.gene34854.t1 | MTR_5g036670 | 74.797 | 123 | 31 | 0 | 1 | 123 | 555 | 677 | 1.71e-60 | 204 |
| MS.gene34854.t1 | MTR_6g008970 | 64.228 | 123 | 44 | 0 | 1 | 123 | 541 | 663 | 3.38e-52 | 180 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34854.t1 | AT1G24190 | 74.797 | 123 | 31 | 0 | 1 | 123 | 497 | 619 | 3.29e-61 | 206 |
| MS.gene34854.t1 | AT1G24190 | 74.797 | 123 | 31 | 0 | 1 | 123 | 493 | 615 | 3.50e-61 | 206 |
| MS.gene34854.t1 | AT1G24190 | 74.797 | 123 | 31 | 0 | 1 | 123 | 493 | 615 | 3.77e-61 | 206 |
| MS.gene34854.t1 | AT1G70060 | 73.171 | 123 | 33 | 0 | 1 | 123 | 511 | 633 | 3.52e-59 | 200 |
| MS.gene34854.t1 | AT1G70060 | 73.171 | 123 | 33 | 0 | 1 | 123 | 511 | 633 | 3.52e-59 | 200 |
| MS.gene34854.t1 | AT1G59890 | 73.984 | 123 | 32 | 0 | 1 | 123 | 386 | 508 | 2.19e-58 | 197 |
| MS.gene34854.t1 | AT1G59890 | 73.984 | 123 | 32 | 0 | 1 | 123 | 382 | 504 | 2.34e-58 | 197 |
| MS.gene34854.t1 | AT1G59890 | 73.984 | 123 | 32 | 0 | 1 | 123 | 391 | 513 | 2.47e-58 | 197 |
| MS.gene34854.t1 | AT1G59890 | 73.984 | 123 | 32 | 0 | 1 | 123 | 386 | 508 | 2.54e-58 | 197 |
| MS.gene34854.t1 | AT1G10450 | 70.732 | 123 | 36 | 0 | 1 | 123 | 369 | 491 | 2.32e-54 | 186 |
| MS.gene34854.t1 | AT1G10450 | 70.732 | 123 | 36 | 0 | 1 | 123 | 369 | 491 | 2.32e-54 | 186 |
| MS.gene34854.t1 | AT1G10450 | 70.732 | 123 | 36 | 0 | 1 | 123 | 420 | 542 | 2.69e-54 | 186 |
| MS.gene34854.t1 | AT5G15020 | 65.041 | 123 | 43 | 0 | 1 | 123 | 533 | 655 | 4.25e-52 | 179 |
| MS.gene34854.t1 | AT5G15020 | 65.041 | 123 | 43 | 0 | 1 | 123 | 533 | 655 | 4.50e-52 | 179 |
| MS.gene34854.t1 | AT3G01320 | 61.789 | 123 | 47 | 0 | 1 | 123 | 538 | 660 | 1.31e-48 | 169 |
| MS.gene34854.t1 | AT3G01320 | 61.789 | 123 | 47 | 0 | 1 | 123 | 526 | 648 | 1.39e-48 | 169 |
Find 49 sgRNAs with CRISPR-Local
Find 82 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTATTGAGGAGCATTTATC+AGG | 0.277753 | 8.2:+38688848 | MS.gene34854:CDS |
| GTGCAGAGTTTAATATAGTT+TGG | 0.279806 | 8.2:+38689129 | MS.gene34854:CDS |
| GAATGCATCTCTAGCCTTGC+CGG | 0.346779 | 8.2:+38689058 | MS.gene34854:CDS |
| TGCAGAGTTTAATATAGTTT+GGG | 0.348281 | 8.2:+38689130 | MS.gene34854:CDS |
| ACTCCTCCTGTTTCTGCTTC+AGG | 0.353246 | 8.2:-38689094 | None:intergenic |
| GTTAATGATGATGTAATTCC+AGG | 0.355314 | 8.2:+38688812 | MS.gene34854:CDS |
| GGATGGTGCTGTTACTGTTC+AGG | 0.386199 | 8.2:+38689787 | MS.gene34854:CDS |
| AAATGCTCCTCAATACGAAT+TGG | 0.386991 | 8.2:-38688842 | None:intergenic |
| GAGCAGGCTGTCGACGGGAC+TGG | 0.402053 | 8.2:+38689825 | MS.gene34854:CDS |
| AACCCGCCTGAAGCAGAAAC+AGG | 0.442327 | 8.2:+38689088 | MS.gene34854:CDS |
| AGGTGCATTGAACGACTATA+CGG | 0.453204 | 8.2:+38688999 | MS.gene34854:CDS |
| ATACGAATTGGAATATCTCC+TGG | 0.466439 | 8.2:-38688830 | None:intergenic |
| AGATATTCCAATTCGTATTG+AGG | 0.495294 | 8.2:+38688835 | MS.gene34854:CDS |
| GAGAAAAGACATTATTTCAA+AGG | 0.496041 | 8.2:+38689766 | MS.gene34854:CDS |
| AAAGACATTATTTCAAAGGA+TGG | 0.504914 | 8.2:+38689770 | MS.gene34854:CDS |
| CGGGACTGGAGCGGAGATTG+TGG | 0.507792 | 8.2:+38689839 | MS.gene34854:CDS |
| CTCCTGTTTCTGCTTCAGGC+GGG | 0.509322 | 8.2:-38689090 | None:intergenic |
| AGTTACACCGGCGGGATCAC+TGG | 0.518021 | 8.2:-38689729 | None:intergenic |
| CAAATACTTGGCTGAAGTGA+AGG | 0.518215 | 8.2:+38689679 | MS.gene34854:CDS |
| TTCAGGCGGGTTAATATCAC+CGG | 0.529652 | 8.2:-38689077 | None:intergenic |
| CCTCCTGTTTCTGCTTCAGG+CGG | 0.534175 | 8.2:-38689091 | None:intergenic |
| GAAGGTGAGGAAGGCAGCCG+AGG | 0.543484 | 8.2:+38689697 | MS.gene34854:CDS |
| TTCTGAGAGAAACAAATACT+TGG | 0.543933 | 8.2:+38689667 | MS.gene34854:CDS |
| TGACCATGGGCTTGATGTGA+TGG | 0.544947 | 8.2:+38689022 | MS.gene34854:CDS |
| AGCTTCGAGCAGGCTGTCGA+CGG | 0.546334 | 8.2:+38689819 | MS.gene34854:CDS |
| GCTTCGAGCAGGCTGTCGAC+GGG | 0.549946 | 8.2:+38689820 | MS.gene34854:CDS |
| GTTGATACGGAGCTTCGAGC+AGG | 0.550606 | 8.2:+38689809 | MS.gene34854:CDS |
| GAACGACTATACGGTGACCA+TGG | 0.550770 | 8.2:+38689008 | MS.gene34854:CDS |
| TGTTACTGTTCAGGTTGATA+CGG | 0.551073 | 8.2:+38689796 | MS.gene34854:CDS |
| GGCTGAAGTGAAGGTGAGGA+AGG | 0.554813 | 8.2:+38689688 | MS.gene34854:CDS |
| GAAGTCGTCATGGGCAACAT+TGG | 0.556203 | 8.2:-38689647 | None:intergenic |
| AACGACTATACGGTGACCAT+GGG | 0.556588 | 8.2:+38689009 | MS.gene34854:CDS |
| TTTCTCTCAGAAGTCGTCAT+GGG | 0.563812 | 8.2:-38689656 | None:intergenic |
| GAAGCAGAAACAGGAGGAGT+GGG | 0.580158 | 8.2:+38689097 | MS.gene34854:CDS |
| GTTTCTCTCAGAAGTCGTCA+TGG | 0.580421 | 8.2:-38689657 | None:intergenic |
| AAACTATATTAAACTCTGCA+CGG | 0.581815 | 8.2:-38689127 | None:intergenic |
| TGAAGCAGAAACAGGAGGAG+TGG | 0.583162 | 8.2:+38689096 | MS.gene34854:CDS |
| GGCTGTCGACGGGACTGGAG+CGG | 0.601171 | 8.2:+38689830 | MS.gene34854:CDS |
| AAGGTGAGGAAGGCAGCCGA+GGG | 0.608404 | 8.2:+38689698 | MS.gene34854:CDS |
| TGCAACAAGTAAGAAAGTTG+AGG | 0.611189 | 8.2:+38688775 | MS.gene34854:CDS |
| TTACGATGAGTTACACCGGC+GGG | 0.613809 | 8.2:-38689737 | None:intergenic |
| ATCACTGGTAGCATATCCCT+CGG | 0.627935 | 8.2:-38689714 | None:intergenic |
| TGCTTTACGATGAGTTACAC+CGG | 0.645166 | 8.2:-38689741 | None:intergenic |
| CTTCCATCACATCAAGCCCA+TGG | 0.664006 | 8.2:-38689025 | None:intergenic |
| ACTTGGCTGAAGTGAAGGTG+AGG | 0.666702 | 8.2:+38689684 | MS.gene34854:CDS |
| GCGGGTTAATATCACCGGCA+AGG | 0.668769 | 8.2:-38689072 | None:intergenic |
| TATGCTACCAGTGATCCCGC+CGG | 0.678025 | 8.2:+38689722 | MS.gene34854:CDS |
| CCGCCTGAAGCAGAAACAGG+AGG | 0.700575 | 8.2:+38689091 | MS.gene34854:CDS |
| TTTACGATGAGTTACACCGG+CGG | 0.801865 | 8.2:-38689738 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTTCTTAACTATATTAAA+AGG | - | chr8.2:38689369-38689388 | None:intergenic | 10.0% |
| !! | TTAAATAACTTACTATTTAA+AGG | - | chr8.2:38689316-38689335 | None:intergenic | 10.0% |
| !!! | GAAATATTTAAAATTAGTTT+AGG | + | chr8.2:38689383-38689402 | MS.gene34854:intron | 10.0% |
| !! | AATTTATCATAGCATATAAA+TGG | + | chr8.2:38688898-38688917 | MS.gene34854:intron | 15.0% |
| !!! | AATCAAATATTTTCTTTCAA+TGG | - | chr8.2:38689342-38689361 | None:intergenic | 15.0% |
| !! | TATTTAAAGGTTGTTAAAGA+GGG | - | chr8.2:38689303-38689322 | None:intergenic | 20.0% |
| !!! | CAATTCTTGATTCTTTTTAA+CGG | + | chr8.2:38689272-38689291 | MS.gene34854:intron | 20.0% |
| ! | AAACTATATTAAACTCTGCA+CGG | - | chr8.2:38689130-38689149 | None:intergenic | 25.0% |
| ! | AAAGACATTATTTCAAAGGA+TGG | + | chr8.2:38689770-38689789 | MS.gene34854:CDS | 25.0% |
| ! | AGAATCAAGAATTGTGTTAT+TGG | - | chr8.2:38689266-38689285 | None:intergenic | 25.0% |
| ! | ATAAACTCTTGAATAAGGAA+GGG | + | chr8.2:38689515-38689534 | MS.gene34854:intron | 25.0% |
| ! | ATTCAAGAGTTTATGGATAT+CGG | - | chr8.2:38689509-38689528 | None:intergenic | 25.0% |
| ! | CTATTTAAAGGTTGTTAAAG+AGG | - | chr8.2:38689304-38689323 | None:intergenic | 25.0% |
| ! | GAGAAAAGACATTATTTCAA+AGG | + | chr8.2:38689766-38689785 | MS.gene34854:CDS | 25.0% |
| ! | TATCCATAAACTCTTGAATA+AGG | + | chr8.2:38689510-38689529 | MS.gene34854:intron | 25.0% |
| ! | TGCAGAGTTTAATATAGTTT+GGG | + | chr8.2:38689130-38689149 | MS.gene34854:CDS | 25.0% |
| ! | TGTCAACAAATAATGAAAAG+AGG | - | chr8.2:38689608-38689627 | None:intergenic | 25.0% |
| !!! | TTGTTTTAGCTCTAAATCTT+AGG | + | chr8.2:38688979-38688998 | MS.gene34854:intron | 25.0% |
| AGAACAGAACACAAAATATC+AGG | - | chr8.2:38688939-38688958 | None:intergenic | 30.0% | |
| AGATATTCCAATTCGTATTG+AGG | + | chr8.2:38688835-38688854 | MS.gene34854:CDS | 30.0% | |
| CATAAACTCTTGAATAAGGA+AGG | + | chr8.2:38689514-38689533 | MS.gene34854:intron | 30.0% | |
| CTTCCTTATTCAAGAGTTTA+TGG | - | chr8.2:38689516-38689535 | None:intergenic | 30.0% | |
| GTGCAGAGTTTAATATAGTT+TGG | + | chr8.2:38689129-38689148 | MS.gene34854:CDS | 30.0% | |
| TAAACTCTTGAATAAGGAAG+GGG | + | chr8.2:38689516-38689535 | MS.gene34854:intron | 30.0% | |
| ! | CTTGATTCTTTTTAACGGTA+TGG | + | chr8.2:38689277-38689296 | MS.gene34854:intron | 30.0% |
| ! | GTTAATGATGATGTAATTCC+AGG | + | chr8.2:38688812-38688831 | MS.gene34854:CDS | 30.0% |
| ! | TTCTGAGAGAAACAAATACT+TGG | + | chr8.2:38689667-38689686 | MS.gene34854:CDS | 30.0% |
| AAATGCTCCTCAATACGAAT+TGG | - | chr8.2:38688845-38688864 | None:intergenic | 35.0% | |
| ACAAAAAGCTTGAGCACTAA+AGG | + | chr8.2:38689221-38689240 | MS.gene34854:CDS | 35.0% | |
| ATACGAATTGGAATATCTCC+TGG | - | chr8.2:38688833-38688852 | None:intergenic | 35.0% | |
| CTGTTCTGATACTATCTTCT+TGG | + | chr8.2:38688952-38688971 | MS.gene34854:intron | 35.0% | |
| TGCAACAAGTAAGAAAGTTG+AGG | + | chr8.2:38688775-38688794 | MS.gene34854:CDS | 35.0% | |
| ! | AAGCTTTTACTTTAAGCAGC+AGG | + | chr8.2:38689196-38689215 | MS.gene34854:CDS | 35.0% |
| !! | TGTTACTGTTCAGGTTGATA+CGG | + | chr8.2:38689796-38689815 | MS.gene34854:CDS | 35.0% |
| AGCCCAAACCAATATTAGCA+GGG | + | chr8.2:38689451-38689470 | MS.gene34854:intron | 40.0% | |
| AGGTGCATTGAACGACTATA+CGG | + | chr8.2:38688999-38689018 | MS.gene34854:CDS | 40.0% | |
| CAAATACTTGGCTGAAGTGA+AGG | + | chr8.2:38689679-38689698 | MS.gene34854:CDS | 40.0% | |
| CTTGAATAAGGAAGGGGATA+CGG | + | chr8.2:38689522-38689541 | MS.gene34854:intron | 40.0% | |
| TGCTTTACGATGAGTTACAC+CGG | - | chr8.2:38689744-38689763 | None:intergenic | 40.0% | |
| TTTCTCTCAGAAGTCGTCAT+GGG | - | chr8.2:38689659-38689678 | None:intergenic | 40.0% | |
| !! | CGTATTGAGGAGCATTTATC+AGG | + | chr8.2:38688848-38688867 | MS.gene34854:CDS | 40.0% |
| AAACCAATATTAGCAGGGCG+TGG | + | chr8.2:38689456-38689475 | MS.gene34854:intron | 45.0% | |
| AACGACTATACGGTGACCAT+GGG | + | chr8.2:38689009-38689028 | MS.gene34854:CDS | 45.0% | |
| ATCACTGGTAGCATATCCCT+CGG | - | chr8.2:38689717-38689736 | None:intergenic | 45.0% | |
| CAGCCCAAACCAATATTAGC+AGG | + | chr8.2:38689450-38689469 | MS.gene34854:intron | 45.0% | |
| GTTTCTCTCAGAAGTCGTCA+TGG | - | chr8.2:38689660-38689679 | None:intergenic | 45.0% | |
| TTTACGATGAGTTACACCGG+CGG | - | chr8.2:38689741-38689760 | None:intergenic | 45.0% | |
| ! | ACGCCCTGCTAATATTGGTT+TGG | - | chr8.2:38689457-38689476 | None:intergenic | 45.0% |
| !! | CGCCCTGCTAATATTGGTTT+GGG | - | chr8.2:38689456-38689475 | None:intergenic | 45.0% |
| !! | TTCAGGCGGGTTAATATCAC+CGG | - | chr8.2:38689080-38689099 | None:intergenic | 45.0% |
| !!! | AAATATTTAAAATTAGTTTA+GGG | + | chr8.2:38689384-38689403 | MS.gene34854:intron | 5.0% |
| ACTTGGCTGAAGTGAAGGTG+AGG | + | chr8.2:38689684-38689703 | MS.gene34854:CDS | 50.0% | |
| CAATATTAGCAGGGCGTGGT+GGG | + | chr8.2:38689460-38689479 | MS.gene34854:intron | 50.0% | |
| CTTCCATCACATCAAGCCCA+TGG | - | chr8.2:38689028-38689047 | None:intergenic | 50.0% | |
| GAACGACTATACGGTGACCA+TGG | + | chr8.2:38689008-38689027 | MS.gene34854:CDS | 50.0% | |
| GAAGCAGAAACAGGAGGAGT+GGG | + | chr8.2:38689097-38689116 | MS.gene34854:CDS | 50.0% | |
| GAAGTCGTCATGGGCAACAT+TGG | - | chr8.2:38689650-38689669 | None:intergenic | 50.0% | |
| GAATAAGGAAGGGGATACGG+AGG | + | chr8.2:38689525-38689544 | MS.gene34854:intron | 50.0% | |
| TGAAGCAGAAACAGGAGGAG+TGG | + | chr8.2:38689096-38689115 | MS.gene34854:CDS | 50.0% | |
| TGACCATGGGCTTGATGTGA+TGG | + | chr8.2:38689022-38689041 | MS.gene34854:CDS | 50.0% | |
| TTACGATGAGTTACACCGGC+GGG | - | chr8.2:38689740-38689759 | None:intergenic | 50.0% | |
| !! | ACTCCTCCTGTTTCTGCTTC+AGG | - | chr8.2:38689097-38689116 | None:intergenic | 50.0% |
| !! | GAATGCATCTCTAGCCTTGC+CGG | + | chr8.2:38689058-38689077 | MS.gene34854:CDS | 50.0% |
| !! | GGATGGTGCTGTTACTGTTC+AGG | + | chr8.2:38689787-38689806 | MS.gene34854:CDS | 50.0% |
| AACCCGCCTGAAGCAGAAAC+AGG | + | chr8.2:38689088-38689107 | MS.gene34854:CDS | 55.0% | |
| CCAATATTAGCAGGGCGTGG+TGG | + | chr8.2:38689459-38689478 | MS.gene34854:intron | 55.0% | |
| CCACCACGCCCTGCTAATAT+TGG | - | chr8.2:38689462-38689481 | None:intergenic | 55.0% | |
| GGCTGAAGTGAAGGTGAGGA+AGG | + | chr8.2:38689688-38689707 | MS.gene34854:CDS | 55.0% | |
| GTTGATACGGAGCTTCGAGC+AGG | + | chr8.2:38689809-38689828 | MS.gene34854:CDS | 55.0% | |
| TATGCTACCAGTGATCCCGC+CGG | + | chr8.2:38689722-38689741 | MS.gene34854:CDS | 55.0% | |
| ! | GCGGGTTAATATCACCGGCA+AGG | - | chr8.2:38689075-38689094 | None:intergenic | 55.0% |
| !! | CCTCCTGTTTCTGCTTCAGG+CGG | - | chr8.2:38689094-38689113 | None:intergenic | 55.0% |
| !! | CTCCTGTTTCTGCTTCAGGC+GGG | - | chr8.2:38689093-38689112 | None:intergenic | 55.0% |
| AAGGTGAGGAAGGCAGCCGA+GGG | + | chr8.2:38689698-38689717 | MS.gene34854:CDS | 60.0% | |
| AGCTTCGAGCAGGCTGTCGA+CGG | + | chr8.2:38689819-38689838 | MS.gene34854:CDS | 60.0% | |
| AGTTACACCGGCGGGATCAC+TGG | - | chr8.2:38689732-38689751 | None:intergenic | 60.0% | |
| CCGCCTGAAGCAGAAACAGG+AGG | + | chr8.2:38689091-38689110 | MS.gene34854:CDS | 60.0% | |
| CGGGACTGGAGCGGAGATTG+TGG | + | chr8.2:38689839-38689858 | MS.gene34854:CDS | 65.0% | |
| GAAGGTGAGGAAGGCAGCCG+AGG | + | chr8.2:38689697-38689716 | MS.gene34854:CDS | 65.0% | |
| GCTTCGAGCAGGCTGTCGAC+GGG | + | chr8.2:38689820-38689839 | MS.gene34854:CDS | 65.0% | |
| GAGCAGGCTGTCGACGGGAC+TGG | + | chr8.2:38689825-38689844 | MS.gene34854:CDS | 70.0% | |
| GGCTGTCGACGGGACTGGAG+CGG | + | chr8.2:38689830-38689849 | MS.gene34854:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 38688755 | 38689871 | 38688755 | ID=MS.gene34854 |
| chr8.2 | mRNA | 38688755 | 38689871 | 38688755 | ID=MS.gene34854.t1;Parent=MS.gene34854 |
| chr8.2 | exon | 38688755 | 38688869 | 38688755 | ID=MS.gene34854.t1.exon1;Parent=MS.gene34854.t1 |
| chr8.2 | CDS | 38688755 | 38688869 | 38688755 | ID=cds.MS.gene34854.t1;Parent=MS.gene34854.t1 |
| chr8.2 | exon | 38688988 | 38689242 | 38688988 | ID=MS.gene34854.t1.exon2;Parent=MS.gene34854.t1 |
| chr8.2 | CDS | 38688988 | 38689242 | 38688988 | ID=cds.MS.gene34854.t1;Parent=MS.gene34854.t1 |
| chr8.2 | exon | 38689645 | 38689871 | 38689645 | ID=MS.gene34854.t1.exon3;Parent=MS.gene34854.t1 |
| chr8.2 | CDS | 38689645 | 38689871 | 38689645 | ID=cds.MS.gene34854.t1;Parent=MS.gene34854.t1 |
| Gene Sequence |
| Protein sequence |
