Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059713.t1 | RHN42986.1 | 94.1 | 203 | 5 | 1 | 1 | 196 | 1 | 203 | 2.90E-101 | 377.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059713.t1 | O23310 | 85.6 | 104 | 15 | 0 | 23 | 126 | 16 | 119 | 2.5e-45 | 183.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059713.t1 | A0A396GPD3 | 94.1 | 203 | 5 | 1 | 1 | 196 | 1 | 203 | 2.1e-101 | 377.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene059713.t1 | TF | NF-YB |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene059713 | 0.807994 | 3.85E-50 | -1.69E-46 |
| MS.gene049159 | MS.gene059713 | 0.804751 | 1.86E-49 | -1.69E-46 |
| MS.gene049382 | MS.gene059713 | 0.814556 | 1.45E-51 | -1.69E-46 |
| MS.gene049585 | MS.gene059713 | 0.824423 | 8.14E-54 | -1.69E-46 |
| MS.gene04984 | MS.gene059713 | 0.805118 | 1.56E-49 | -1.69E-46 |
| MS.gene049887 | MS.gene059713 | 0.810868 | 9.31E-51 | -1.69E-46 |
| MS.gene050629 | MS.gene059713 | -0.821564 | 3.78E-53 | -1.69E-46 |
| MS.gene050762 | MS.gene059713 | 0.848307 | 6.66E-60 | -1.69E-46 |
| MS.gene050763 | MS.gene059713 | 0.849555 | 3.00E-60 | -1.69E-46 |
| MS.gene050807 | MS.gene059713 | 0.827264 | 1.72E-54 | -1.69E-46 |
| MS.gene050826 | MS.gene059713 | 0.811783 | 5.89E-51 | -1.69E-46 |
| MS.gene051102 | MS.gene059713 | 0.840632 | 7.74E-58 | -1.69E-46 |
| MS.gene051180 | MS.gene059713 | 0.811254 | 7.67E-51 | -1.69E-46 |
| MS.gene051210 | MS.gene059713 | 0.801927 | 7.15E-49 | -1.69E-46 |
| MS.gene051757 | MS.gene059713 | 0.820881 | 5.43E-53 | -1.69E-46 |
| MS.gene052397 | MS.gene059713 | 0.81442 | 1.55E-51 | -1.69E-46 |
| MS.gene052496 | MS.gene059713 | 0.808087 | 3.68E-50 | -1.69E-46 |
| MS.gene052516 | MS.gene059713 | 0.804107 | 2.53E-49 | -1.69E-46 |
| MS.gene052609 | MS.gene059713 | 0.807088 | 6.00E-50 | -1.69E-46 |
| MS.gene052665 | MS.gene059713 | 0.831033 | 2.10E-55 | -1.69E-46 |
| MS.gene052856 | MS.gene059713 | 0.817913 | 2.58E-52 | -1.69E-46 |
| MS.gene052860 | MS.gene059713 | 0.802363 | 5.81E-49 | -1.69E-46 |
| MS.gene052896 | MS.gene059713 | 0.815719 | 8.00E-52 | -1.69E-46 |
| MS.gene054379 | MS.gene059713 | 0.838965 | 2.10E-57 | -1.69E-46 |
| MS.gene054472 | MS.gene059713 | 0.803003 | 4.29E-49 | -1.69E-46 |
| MS.gene05462 | MS.gene059713 | 0.825623 | 4.24E-54 | -1.69E-46 |
| MS.gene055469 | MS.gene059713 | 0.831075 | 2.05E-55 | -1.69E-46 |
| MS.gene05604 | MS.gene059713 | 0.800063 | 1.72E-48 | -1.69E-46 |
| MS.gene056432 | MS.gene059713 | 0.81279 | 3.55E-51 | -1.69E-46 |
| MS.gene056760 | MS.gene059713 | 0.829152 | 6.04E-55 | -1.69E-46 |
| MS.gene057360 | MS.gene059713 | 0.805843 | 1.10E-49 | -1.69E-46 |
| MS.gene057869 | MS.gene059713 | 0.813776 | 2.16E-51 | -1.69E-46 |
| MS.gene058638 | MS.gene059713 | 0.812492 | 4.13E-51 | -1.69E-46 |
| MS.gene058639 | MS.gene059713 | 0.819887 | 9.17E-53 | -1.69E-46 |
| MS.gene058758 | MS.gene059713 | 0.81717 | 3.79E-52 | -1.69E-46 |
| MS.gene058906 | MS.gene059713 | 0.811233 | 7.76E-51 | -1.69E-46 |
| MS.gene059171 | MS.gene059713 | 0.81506 | 1.12E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene059719 | 0.805007 | 1.64E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene059725 | 0.813322 | 2.71E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene060380 | 0.801334 | 9.46E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene06052 | 0.801958 | 7.04E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene060637 | 0.829377 | 5.32E-55 | -1.69E-46 |
| MS.gene059713 | MS.gene060870 | 0.802729 | 4.89E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene060998 | 0.817495 | 3.20E-52 | -1.69E-46 |
| MS.gene059713 | MS.gene06133 | 0.803757 | 2.99E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene061618 | 0.806074 | 9.81E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene061958 | 0.809837 | 1.55E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene062352 | 0.806272 | 8.92E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene06324 | 0.805489 | 1.30E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene064070 | 0.8145 | 1.49E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene064863 | 0.825767 | 3.92E-54 | -1.69E-46 |
| MS.gene059713 | MS.gene064944 | 0.818544 | 1.85E-52 | -1.69E-46 |
| MS.gene059713 | MS.gene065568 | 0.811453 | 6.95E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene065593 | 0.828665 | 7.92E-55 | -1.69E-46 |
| MS.gene059713 | MS.gene065825 | 0.810439 | 1.15E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene065908 | 0.837026 | 6.62E-57 | -1.69E-46 |
| MS.gene059713 | MS.gene065934 | 0.831441 | 1.67E-55 | -1.69E-46 |
| MS.gene059713 | MS.gene066427 | 0.811917 | 5.51E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene066436 | 0.830283 | 3.20E-55 | -1.69E-46 |
| MS.gene059713 | MS.gene066896 | 0.837445 | 5.18E-57 | -1.69E-46 |
| MS.gene059713 | MS.gene066897 | 0.806125 | 9.58E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene067450 | 0.82779 | 1.29E-54 | -1.69E-46 |
| MS.gene059713 | MS.gene068038 | 0.844046 | 9.63E-59 | -1.69E-46 |
| MS.gene059713 | MS.gene068388 | 0.814659 | 1.38E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene068957 | 0.800011 | 1.76E-48 | -1.69E-46 |
| MS.gene059713 | MS.gene069021 | 0.819612 | 1.06E-52 | -1.69E-46 |
| MS.gene059713 | MS.gene06911 | 0.800921 | 1.15E-48 | -1.69E-46 |
| MS.gene059713 | MS.gene06921 | 0.80005 | 1.73E-48 | -1.69E-46 |
| MS.gene059713 | MS.gene06922 | 0.800072 | 1.71E-48 | -1.69E-46 |
| MS.gene059713 | MS.gene069690 | 0.806237 | 9.07E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene069727 | 0.813608 | 2.35E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene069733 | 0.809423 | 1.91E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene069754 | 0.801135 | 1.04E-48 | -1.69E-46 |
| MS.gene059713 | MS.gene071699 | 0.840924 | 6.48E-58 | -1.69E-46 |
| MS.gene059713 | MS.gene072564 | 0.832989 | 6.90E-56 | -1.69E-46 |
| MS.gene059713 | MS.gene072565 | 0.832469 | 9.29E-56 | -1.69E-46 |
| MS.gene059713 | MS.gene072822 | 0.800463 | 1.42E-48 | -1.69E-46 |
| MS.gene059713 | MS.gene073132 | 0.800012 | 1.76E-48 | -1.69E-46 |
| MS.gene059713 | MS.gene073753 | 0.805731 | 1.16E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene074000 | 0.803969 | 2.71E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene074435 | 0.837838 | 4.10E-57 | -1.69E-46 |
| MS.gene059713 | MS.gene07872 | 0.821014 | 5.06E-53 | -1.69E-46 |
| MS.gene059713 | MS.gene09400 | 0.822375 | 2.45E-53 | -1.69E-46 |
| MS.gene059713 | MS.gene20621 | 0.809856 | 1.54E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene21200 | 0.809305 | 2.02E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene22361 | 0.813709 | 2.23E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene22389 | 0.801089 | 1.06E-48 | -1.69E-46 |
| MS.gene059713 | MS.gene22545 | 0.814496 | 1.50E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene22897 | 0.814209 | 1.73E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene23103 | 0.810785 | 9.70E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene23105 | 0.824993 | 5.97E-54 | -1.69E-46 |
| MS.gene059713 | MS.gene23893 | 0.814428 | 1.55E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene23963 | 0.846835 | 1.69E-59 | -1.69E-46 |
| MS.gene059713 | MS.gene24102 | 0.816977 | 4.19E-52 | -1.69E-46 |
| MS.gene059713 | MS.gene24203 | 0.812094 | 5.04E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene24268 | 0.82094 | 5.26E-53 | -1.69E-46 |
| MS.gene059713 | MS.gene24382 | 0.80096 | 1.13E-48 | -1.69E-46 |
| MS.gene059713 | MS.gene24417 | 0.80787 | 4.09E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene24740 | 0.803598 | 3.23E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene25109 | 0.84903 | 4.20E-60 | -1.69E-46 |
| MS.gene059713 | MS.gene25174 | 0.831646 | 1.48E-55 | -1.69E-46 |
| MS.gene059713 | MS.gene25274 | 0.832186 | 1.09E-55 | -1.69E-46 |
| MS.gene059713 | MS.gene25810 | 0.828825 | 7.25E-55 | -1.69E-46 |
| MS.gene059713 | MS.gene25816 | 0.800332 | 1.51E-48 | -1.69E-46 |
| MS.gene059713 | MS.gene26288 | 0.800895 | 1.16E-48 | -1.69E-46 |
| MS.gene059713 | MS.gene26306 | 0.80895 | 2.41E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene26567 | 0.838654 | 2.53E-57 | -1.69E-46 |
| MS.gene059713 | MS.gene26741 | 0.805365 | 1.38E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene26972 | 0.823997 | 1.02E-53 | -1.69E-46 |
| MS.gene059713 | MS.gene26974 | 0.816395 | 5.65E-52 | -1.69E-46 |
| MS.gene059713 | MS.gene27008 | 0.824262 | 8.88E-54 | -1.69E-46 |
| MS.gene059713 | MS.gene27302 | 0.82749 | 1.52E-54 | -1.69E-46 |
| MS.gene059713 | MS.gene27401 | 0.806927 | 6.48E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene27414 | 0.800089 | 1.70E-48 | -1.69E-46 |
| MS.gene059713 | MS.gene27814 | 0.802432 | 5.63E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene27918 | 0.824381 | 8.32E-54 | -1.69E-46 |
| MS.gene059713 | MS.gene27919 | 0.823699 | 1.20E-53 | -1.69E-46 |
| MS.gene059713 | MS.gene27991 | 0.812564 | 3.98E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene28133 | 0.817235 | 3.66E-52 | -1.69E-46 |
| MS.gene059713 | MS.gene28525 | 0.82527 | 5.14E-54 | -1.69E-46 |
| MS.gene059713 | MS.gene28623 | 0.807925 | 3.98E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene28835 | 0.813984 | 1.94E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene29022 | 0.806906 | 6.55E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene29095 | 0.805146 | 1.54E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene29136 | 0.811211 | 7.84E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene29361 | 0.835477 | 1.64E-56 | -1.69E-46 |
| MS.gene059713 | MS.gene29405 | 0.816348 | 5.79E-52 | -1.69E-46 |
| MS.gene059713 | MS.gene30114 | 0.803614 | 3.21E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene30419 | 0.842668 | 2.25E-58 | -1.69E-46 |
| MS.gene059713 | MS.gene30530 | 0.805961 | 1.04E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene30739 | 0.827229 | 1.76E-54 | -1.69E-46 |
| MS.gene059713 | MS.gene30964 | 0.80642 | 8.30E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene31650 | 0.801497 | 8.76E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene32555 | 0.815693 | 8.11E-52 | -1.69E-46 |
| MS.gene059713 | MS.gene34453 | 0.821849 | 3.24E-53 | -1.69E-46 |
| MS.gene059713 | MS.gene34485 | 0.824261 | 8.88E-54 | -1.69E-46 |
| MS.gene059713 | MS.gene34854 | 0.813856 | 2.07E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene35000 | 0.82423 | 9.03E-54 | -1.69E-46 |
| MS.gene059713 | MS.gene35003 | 0.814155 | 1.78E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene35004 | 0.83192 | 1.27E-55 | -1.69E-46 |
| MS.gene059713 | MS.gene35005 | 0.8007 | 1.27E-48 | -1.69E-46 |
| MS.gene059713 | MS.gene35428 | 0.81292 | 3.32E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene35631 | 0.829022 | 6.49E-55 | -1.69E-46 |
| MS.gene059713 | MS.gene35799 | 0.802845 | 4.62E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene35808 | 0.814585 | 1.43E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene35867 | 0.80115 | 1.03E-48 | -1.69E-46 |
| MS.gene059713 | MS.gene35870 | 0.815566 | 8.66E-52 | -1.69E-46 |
| MS.gene059713 | MS.gene35930 | 0.800438 | 1.44E-48 | -1.69E-46 |
| MS.gene059713 | MS.gene36115 | 0.831026 | 2.11E-55 | -1.69E-46 |
| MS.gene059713 | MS.gene36567 | 0.843736 | 1.17E-58 | -1.69E-46 |
| MS.gene059713 | MS.gene36672 | 0.834571 | 2.78E-56 | -1.69E-46 |
| MS.gene059713 | MS.gene37559 | 0.822336 | 2.50E-53 | -1.69E-46 |
| MS.gene059713 | MS.gene37876 | 0.828856 | 7.13E-55 | -1.69E-46 |
| MS.gene059713 | MS.gene38528 | 0.803469 | 3.43E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene38558 | 0.812782 | 3.57E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene39586 | 0.836685 | 8.10E-57 | -1.69E-46 |
| MS.gene059713 | MS.gene40565 | 0.820066 | 8.35E-53 | -1.69E-46 |
| MS.gene059713 | MS.gene40739 | 0.808237 | 3.42E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene41427 | 0.84984 | 2.50E-60 | -1.69E-46 |
| MS.gene059713 | MS.gene41757 | 0.816265 | 6.05E-52 | -1.69E-46 |
| MS.gene059713 | MS.gene41839 | 0.805176 | 1.51E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene41903 | 0.800167 | 1.64E-48 | -1.69E-46 |
| MS.gene059713 | MS.gene42101 | 0.817169 | 3.79E-52 | -1.69E-46 |
| MS.gene059713 | MS.gene42284 | 0.805611 | 1.23E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene42728 | 0.80189 | 7.27E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene43202 | 0.820744 | 5.83E-53 | -1.69E-46 |
| MS.gene059713 | MS.gene43324 | 0.810968 | 8.85E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene43973 | 0.806472 | 8.09E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene44001 | 0.855662 | 5.43E-62 | -1.69E-46 |
| MS.gene059713 | MS.gene44135 | -0.824339 | 8.52E-54 | -1.69E-46 |
| MS.gene059713 | MS.gene44427 | 0.802244 | 6.15E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene44795 | 0.800637 | 1.31E-48 | -1.69E-46 |
| MS.gene059713 | MS.gene44967 | 0.820915 | 5.33E-53 | -1.69E-46 |
| MS.gene059713 | MS.gene45193 | 0.832645 | 8.40E-56 | -1.69E-46 |
| MS.gene059713 | MS.gene45194 | 0.813301 | 2.74E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene45498 | 0.806269 | 8.93E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene45624 | 0.820723 | 5.90E-53 | -1.69E-46 |
| MS.gene059713 | MS.gene46250 | 0.801577 | 8.43E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene47516 | 0.847574 | 1.06E-59 | -1.69E-46 |
| MS.gene059713 | MS.gene47706 | 0.806614 | 7.55E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene47747 | 0.820943 | 5.25E-53 | -1.69E-46 |
| MS.gene059713 | MS.gene47875 | 0.819376 | 1.20E-52 | -1.69E-46 |
| MS.gene059713 | MS.gene47955 | 0.812236 | 4.69E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene48054 | 0.834264 | 3.31E-56 | -1.69E-46 |
| MS.gene059713 | MS.gene48283 | 0.818486 | 1.91E-52 | -1.69E-46 |
| MS.gene059713 | MS.gene48814 | 0.800493 | 1.40E-48 | -1.69E-46 |
| MS.gene059713 | MS.gene49003 | 0.800052 | 1.73E-48 | -1.69E-46 |
| MS.gene059713 | MS.gene49047 | 0.809632 | 1.72E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene49282 | 0.830374 | 3.04E-55 | -1.69E-46 |
| MS.gene059713 | MS.gene49288 | 0.800395 | 1.47E-48 | -1.69E-46 |
| MS.gene059713 | MS.gene49486 | 0.854439 | 1.23E-61 | -1.69E-46 |
| MS.gene059713 | MS.gene49665 | 0.822283 | 2.57E-53 | -1.69E-46 |
| MS.gene059713 | MS.gene49883 | 0.812787 | 3.56E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene50163 | 0.811435 | 7.01E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene50365 | 0.824487 | 7.86E-54 | -1.69E-46 |
| MS.gene059713 | MS.gene50595 | 0.805628 | 1.22E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene51028 | 0.806049 | 9.93E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene51029 | 0.805525 | 1.28E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene51240 | 0.801576 | 8.44E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene51472 | 0.810081 | 1.38E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene51818 | 0.801876 | 7.32E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene52579 | 0.817029 | 4.08E-52 | -1.69E-46 |
| MS.gene059713 | MS.gene52610 | 0.8164 | 5.64E-52 | -1.69E-46 |
| MS.gene059713 | MS.gene52853 | 0.80126 | 9.79E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene52956 | 0.820382 | 7.06E-53 | -1.69E-46 |
| MS.gene059713 | MS.gene53552 | 0.805134 | 1.55E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene53586 | 0.811057 | 8.47E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene54547 | 0.802827 | 4.66E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene54555 | 0.820633 | 6.19E-53 | -1.69E-46 |
| MS.gene059713 | MS.gene55127 | 0.816646 | 4.97E-52 | -1.69E-46 |
| MS.gene059713 | MS.gene55470 | 0.804326 | 2.28E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene56462 | 0.802277 | 6.05E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene56555 | 0.803797 | 2.94E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene56717 | 0.802644 | 5.09E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene57090 | 0.804074 | 2.57E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene57388 | 0.810768 | 9.78E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene58092 | 0.803101 | 4.09E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene58579 | 0.813697 | 2.25E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene59366 | 0.823558 | 1.30E-53 | -1.69E-46 |
| MS.gene059713 | MS.gene60143 | 0.802666 | 5.03E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene60144 | 0.822891 | 1.86E-53 | -1.69E-46 |
| MS.gene059713 | MS.gene60163 | 0.813568 | 2.40E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene60529 | 0.821514 | 3.88E-53 | -1.69E-46 |
| MS.gene059713 | MS.gene60565 | 0.817767 | 2.78E-52 | -1.69E-46 |
| MS.gene059713 | MS.gene61163 | 0.811967 | 5.37E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene61768 | 0.805587 | 1.24E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene62214 | 0.819648 | 1.04E-52 | -1.69E-46 |
| MS.gene059713 | MS.gene62504 | 0.810703 | 1.01E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene62682 | 0.829971 | 3.82E-55 | -1.69E-46 |
| MS.gene059713 | MS.gene63327 | 0.841409 | 4.84E-58 | -1.69E-46 |
| MS.gene059713 | MS.gene63887 | 0.807488 | 4.93E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene63902 | 0.80328 | 3.76E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene64417 | 0.80121 | 1.00E-48 | -1.69E-46 |
| MS.gene059713 | MS.gene64671 | 0.810449 | 1.15E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene65172 | 0.811119 | 8.21E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene65300 | 0.816637 | 4.99E-52 | -1.69E-46 |
| MS.gene059713 | MS.gene67141 | 0.853214 | 2.77E-61 | -1.69E-46 |
| MS.gene059713 | MS.gene67553 | 0.822929 | 1.82E-53 | -1.69E-46 |
| MS.gene059713 | MS.gene67785 | 0.801846 | 7.43E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene68115 | 0.809746 | 1.62E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene68360 | 0.807758 | 4.32E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene68532 | 0.801264 | 9.77E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene68773 | 0.811684 | 6.19E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene68959 | 0.807885 | 4.06E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene69794 | 0.818487 | 1.91E-52 | -1.69E-46 |
| MS.gene059713 | MS.gene69940 | 0.806747 | 7.08E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene70237 | 0.800089 | 1.70E-48 | -1.69E-46 |
| MS.gene059713 | MS.gene70331 | 0.994894 | 3.84E-211 | -1.69E-46 |
| MS.gene059713 | MS.gene70730 | 0.829455 | 5.10E-55 | -1.69E-46 |
| MS.gene059713 | MS.gene70811 | 0.800036 | 1.74E-48 | -1.69E-46 |
| MS.gene059713 | MS.gene70819 | 0.82684 | 2.18E-54 | -1.69E-46 |
| MS.gene059713 | MS.gene70825 | 0.821695 | 3.52E-53 | -1.69E-46 |
| MS.gene059713 | MS.gene70846 | 0.80158 | 8.42E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene71232 | 0.839996 | 1.13E-57 | -1.69E-46 |
| MS.gene059713 | MS.gene72272 | 0.827146 | 1.84E-54 | -1.69E-46 |
| MS.gene059713 | MS.gene72986 | 0.811207 | 7.86E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene73273 | 0.800507 | 1.40E-48 | -1.69E-46 |
| MS.gene059713 | MS.gene73332 | 0.808076 | 3.70E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene73340 | 0.828428 | 9.04E-55 | -1.69E-46 |
| MS.gene059713 | MS.gene74226 | 0.832261 | 1.05E-55 | -1.69E-46 |
| MS.gene059713 | MS.gene74243 | 0.837035 | 6.59E-57 | -1.69E-46 |
| MS.gene059713 | MS.gene74244 | 0.812383 | 4.36E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene74900 | 0.801965 | 7.02E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene74980 | 0.813759 | 2.18E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene75229 | 0.805127 | 1.55E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene75412 | 0.800498 | 1.40E-48 | -1.69E-46 |
| MS.gene059713 | MS.gene75993 | 0.804572 | 2.03E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene76403 | 0.802097 | 6.59E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene77561 | 0.80074 | 1.25E-48 | -1.69E-46 |
| MS.gene059713 | MS.gene78492 | 0.802441 | 5.60E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene79280 | 0.805443 | 1.33E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene80233 | 0.806733 | 7.13E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene80298 | 0.812187 | 4.81E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene81370 | 0.802491 | 5.47E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene81381 | 0.815772 | 7.79E-52 | -1.69E-46 |
| MS.gene059713 | MS.gene81998 | 0.83131 | 1.80E-55 | -1.69E-46 |
| MS.gene059713 | MS.gene82699 | 0.808538 | 2.95E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene82839 | 0.813231 | 2.84E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene82929 | 0.800414 | 1.46E-48 | -1.69E-46 |
| MS.gene059713 | MS.gene82989 | 0.818324 | 2.08E-52 | -1.69E-46 |
| MS.gene059713 | MS.gene83055 | 0.810709 | 1.01E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene83056 | 0.821424 | 4.07E-53 | -1.69E-46 |
| MS.gene059713 | MS.gene83689 | 0.813151 | 2.96E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene84388 | 0.817575 | 3.07E-52 | -1.69E-46 |
| MS.gene059713 | MS.gene84485 | 0.832491 | 9.17E-56 | -1.69E-46 |
| MS.gene059713 | MS.gene84767 | 0.809052 | 2.29E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene84840 | 0.809359 | 1.97E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene86973 | 0.825378 | 4.84E-54 | -1.69E-46 |
| MS.gene059713 | MS.gene87037 | 0.80949 | 1.84E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene87264 | 0.851519 | 8.42E-61 | -1.69E-46 |
| MS.gene059713 | MS.gene87622 | 0.810593 | 1.07E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene87771 | 0.800624 | 1.32E-48 | -1.69E-46 |
| MS.gene059713 | MS.gene88450 | 0.82535 | 4.92E-54 | -1.69E-46 |
| MS.gene059713 | MS.gene88594 | 0.833579 | 4.92E-56 | -1.69E-46 |
| MS.gene059713 | MS.gene88649 | 0.802177 | 6.35E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene89419 | 0.806673 | 7.34E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene89434 | 0.810779 | 9.73E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene89581 | 0.827603 | 1.43E-54 | -1.69E-46 |
| MS.gene059713 | MS.gene89888 | 0.814011 | 1.91E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene90206 | 0.83398 | 3.90E-56 | -1.69E-46 |
| MS.gene059713 | MS.gene90431 | 0.84148 | 4.63E-58 | -1.69E-46 |
| MS.gene059713 | MS.gene90649 | 0.812467 | 4.18E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene90689 | 0.822796 | 1.96E-53 | -1.69E-46 |
| MS.gene059713 | MS.gene90787 | 0.840969 | 6.31E-58 | -1.69E-46 |
| MS.gene059713 | MS.gene91116 | 0.812795 | 3.54E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene91965 | 0.811676 | 6.22E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene94949 | 0.824111 | 9.63E-54 | -1.69E-46 |
| MS.gene059713 | MS.gene95208 | 0.842039 | 3.30E-58 | -1.69E-46 |
| MS.gene059713 | MS.gene95562 | 0.813035 | 3.14E-51 | -1.69E-46 |
| MS.gene059713 | MS.gene95698 | 0.803966 | 2.71E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene96564 | 0.815534 | 8.80E-52 | -1.69E-46 |
| MS.gene059713 | MS.gene96598 | 0.834985 | 2.18E-56 | -1.69E-46 |
| MS.gene059713 | MS.gene96791 | 0.804696 | 1.91E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene97761 | 0.841111 | 5.79E-58 | -1.69E-46 |
| MS.gene059713 | MS.gene97782 | 0.80268 | 5.00E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene98990 | 0.803889 | 2.81E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene99462 | 0.830559 | 2.74E-55 | -1.69E-46 |
| MS.gene059713 | MS.gene99533 | 0.838463 | 2.83E-57 | -1.69E-46 |
| MS.gene059713 | MS.gene99887 | 0.830834 | 2.35E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059713.t1 | MTR_8g091720 | 93.717 | 191 | 5 | 1 | 1 | 184 | 1 | 191 | 9.77e-131 | 365 |
| MS.gene059713.t1 | MTR_5g095740 | 79.487 | 117 | 22 | 1 | 13 | 129 | 10 | 124 | 8.07e-63 | 192 |
| MS.gene059713.t1 | MTR_2g026710 | 80.702 | 114 | 20 | 1 | 24 | 137 | 13 | 124 | 2.57e-62 | 191 |
| MS.gene059713.t1 | MTR_3g058980 | 87.879 | 99 | 12 | 0 | 25 | 123 | 24 | 122 | 4.04e-60 | 186 |
| MS.gene059713.t1 | MTR_7g061270 | 75.439 | 114 | 28 | 0 | 13 | 126 | 11 | 124 | 1.31e-59 | 184 |
| MS.gene059713.t1 | MTR_7g100650 | 75.439 | 114 | 28 | 0 | 13 | 126 | 11 | 124 | 1.34e-59 | 184 |
| MS.gene059713.t1 | MTR_8g093920 | 76.636 | 107 | 25 | 0 | 27 | 133 | 39 | 145 | 1.44e-56 | 178 |
| MS.gene059713.t1 | MTR_1g072790 | 76.699 | 103 | 24 | 0 | 23 | 125 | 24 | 126 | 2.27e-56 | 176 |
| MS.gene059713.t1 | MTR_4g133938 | 74.312 | 109 | 28 | 0 | 17 | 125 | 8 | 116 | 2.17e-53 | 167 |
| MS.gene059713.t1 | MTR_1g088860 | 69.307 | 101 | 31 | 0 | 22 | 122 | 30 | 130 | 1.83e-48 | 157 |
| MS.gene059713.t1 | MTR_0392s0020 | 64.151 | 106 | 38 | 0 | 21 | 126 | 11 | 116 | 2.69e-48 | 154 |
| MS.gene059713.t1 | MTR_4g119500 | 56.557 | 122 | 53 | 0 | 12 | 133 | 6 | 127 | 2.47e-47 | 151 |
| MS.gene059713.t1 | MTR_4g133952 | 64.948 | 97 | 34 | 0 | 27 | 123 | 57 | 153 | 4.84e-46 | 152 |
| MS.gene059713.t1 | MTR_1g039040 | 62.745 | 102 | 38 | 0 | 27 | 128 | 5 | 106 | 1.38e-44 | 146 |
| MS.gene059713.t1 | MTR_1g083070 | 61.957 | 92 | 35 | 0 | 28 | 119 | 4 | 95 | 7.69e-39 | 130 |
| MS.gene059713.t1 | MTR_1g029070 | 49.580 | 119 | 54 | 1 | 14 | 126 | 32 | 150 | 2.45e-32 | 115 |
| MS.gene059713.t1 | MTR_5g095900 | 44.330 | 97 | 51 | 1 | 24 | 117 | 9 | 105 | 1.50e-21 | 87.4 |
| MS.gene059713.t1 | MTR_1g028480 | 53.125 | 64 | 30 | 0 | 58 | 121 | 19 | 82 | 2.13e-18 | 77.0 |
| MS.gene059713.t1 | MTR_1g029100 | 40.789 | 76 | 45 | 0 | 33 | 108 | 7 | 82 | 1.91e-17 | 73.9 |
| MS.gene059713.t1 | MTR_2g056000 | 32.143 | 84 | 57 | 0 | 22 | 105 | 35 | 118 | 1.20e-13 | 66.6 |
| MS.gene059713.t1 | MTR_4g112380 | 33.766 | 77 | 51 | 0 | 29 | 105 | 12 | 88 | 2.63e-13 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059713.t1 | AT4G14540 | 81.818 | 110 | 20 | 0 | 24 | 133 | 17 | 126 | 3.65e-64 | 195 |
| MS.gene059713.t1 | AT5G47640 | 85.859 | 99 | 14 | 0 | 25 | 123 | 24 | 122 | 6.47e-60 | 186 |
| MS.gene059713.t1 | AT2G13570 | 74.576 | 118 | 29 | 1 | 8 | 125 | 17 | 133 | 1.92e-59 | 185 |
| MS.gene059713.t1 | AT3G53340 | 68.800 | 125 | 28 | 2 | 14 | 133 | 21 | 139 | 1.87e-56 | 176 |
| MS.gene059713.t1 | AT3G53340 | 68.800 | 125 | 28 | 2 | 14 | 133 | 21 | 139 | 1.87e-56 | 176 |
| MS.gene059713.t1 | AT2G37060 | 71.552 | 116 | 28 | 1 | 27 | 137 | 29 | 144 | 4.54e-56 | 175 |
| MS.gene059713.t1 | AT2G37060 | 71.552 | 116 | 28 | 1 | 27 | 137 | 29 | 144 | 4.54e-56 | 175 |
| MS.gene059713.t1 | AT2G37060 | 71.552 | 116 | 28 | 1 | 27 | 137 | 29 | 144 | 4.54e-56 | 175 |
| MS.gene059713.t1 | AT2G38880 | 69.643 | 112 | 34 | 0 | 14 | 125 | 7 | 118 | 7.77e-55 | 171 |
| MS.gene059713.t1 | AT3G53340 | 75.238 | 105 | 20 | 1 | 14 | 118 | 21 | 119 | 9.01e-55 | 170 |
| MS.gene059713.t1 | AT2G38880 | 69.643 | 112 | 34 | 0 | 14 | 125 | 7 | 118 | 1.20e-54 | 171 |
| MS.gene059713.t1 | AT2G38880 | 69.643 | 112 | 34 | 0 | 14 | 125 | 7 | 118 | 1.20e-54 | 171 |
| MS.gene059713.t1 | AT2G38880 | 69.643 | 112 | 34 | 0 | 14 | 125 | 7 | 118 | 1.20e-54 | 171 |
| MS.gene059713.t1 | AT3G53340 | 75.472 | 106 | 20 | 1 | 14 | 119 | 21 | 120 | 2.67e-54 | 170 |
| MS.gene059713.t1 | AT3G53340 | 75.472 | 106 | 20 | 1 | 14 | 119 | 21 | 120 | 2.67e-54 | 170 |
| MS.gene059713.t1 | AT2G38880 | 71.429 | 105 | 30 | 0 | 14 | 118 | 7 | 111 | 1.13e-52 | 164 |
| MS.gene059713.t1 | AT2G38880 | 67.544 | 114 | 37 | 0 | 14 | 127 | 7 | 120 | 1.39e-52 | 165 |
| MS.gene059713.t1 | AT2G38880 | 71.429 | 105 | 30 | 0 | 14 | 118 | 7 | 111 | 3.32e-52 | 165 |
| MS.gene059713.t1 | AT2G38880 | 71.429 | 105 | 30 | 0 | 14 | 118 | 7 | 111 | 3.32e-52 | 165 |
| MS.gene059713.t1 | AT2G38880 | 77.660 | 94 | 21 | 0 | 25 | 118 | 18 | 111 | 5.34e-52 | 164 |
| MS.gene059713.t1 | AT2G38880 | 77.660 | 94 | 21 | 0 | 25 | 118 | 18 | 111 | 5.34e-52 | 164 |
| MS.gene059713.t1 | AT2G38880 | 77.660 | 94 | 21 | 0 | 25 | 118 | 18 | 111 | 5.34e-52 | 164 |
| MS.gene059713.t1 | AT2G47810 | 71.845 | 103 | 29 | 0 | 22 | 124 | 45 | 147 | 3.72e-51 | 162 |
| MS.gene059713.t1 | AT5G47670 | 60.714 | 112 | 44 | 0 | 16 | 127 | 17 | 128 | 6.05e-48 | 155 |
| MS.gene059713.t1 | AT5G47670 | 60.714 | 112 | 44 | 0 | 16 | 127 | 46 | 157 | 1.49e-47 | 155 |
| MS.gene059713.t1 | AT5G47670 | 60.714 | 112 | 44 | 0 | 16 | 127 | 46 | 157 | 1.49e-47 | 155 |
| MS.gene059713.t1 | AT1G21970 | 62.000 | 100 | 38 | 0 | 26 | 125 | 57 | 156 | 2.48e-45 | 150 |
| MS.gene059713.t1 | AT1G09030 | 62.500 | 96 | 36 | 0 | 28 | 123 | 3 | 98 | 1.22e-42 | 140 |
| MS.gene059713.t1 | AT5G08190 | 35.897 | 78 | 50 | 0 | 28 | 105 | 11 | 88 | 1.70e-14 | 68.2 |
| MS.gene059713.t1 | AT5G08190 | 35.897 | 78 | 50 | 0 | 28 | 105 | 11 | 88 | 1.83e-14 | 68.2 |
| MS.gene059713.t1 | AT5G23090 | 33.766 | 77 | 51 | 0 | 29 | 105 | 12 | 88 | 4.99e-14 | 67.0 |
| MS.gene059713.t1 | AT5G23090 | 33.766 | 77 | 51 | 0 | 29 | 105 | 12 | 88 | 4.99e-14 | 67.0 |
| MS.gene059713.t1 | AT5G23090 | 33.766 | 77 | 51 | 0 | 29 | 105 | 12 | 88 | 4.99e-14 | 67.0 |
| MS.gene059713.t1 | AT5G23090 | 33.766 | 77 | 51 | 0 | 29 | 105 | 12 | 88 | 4.99e-14 | 67.0 |
Find 42 sgRNAs with CRISPR-Local
Find 45 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAATGGTGATGATCTTCTT+TGG | 0.277181 | 4.2:-10376442 | MS.gene059713:CDS |
| TTAATCTCTTGGAACCTCTT+TGG | 0.292077 | 4.2:+10376245 | None:intergenic |
| AAGTTTATCTTAATAATTAT+AGG | 0.297968 | 4.2:-10376376 | MS.gene059713:CDS |
| GAGTTCATAAGTTTCATTAC+TGG | 0.304041 | 4.2:-10376506 | MS.gene059713:CDS |
| TGCCACCAAACCTACGTTAC+AGG | 0.318400 | 4.2:-10376145 | MS.gene059713:CDS |
| GAAAAGAGGAAAACAATTAA+TGG | 0.329176 | 4.2:-10376458 | MS.gene059713:CDS |
| AGTTTATCTTAATAATTATA+GGG | 0.334719 | 4.2:-10376375 | MS.gene059713:CDS |
| ATTGTGGATTATAGAGTAAT+TGG | 0.335947 | 4.2:-10376215 | MS.gene059713:CDS |
| AAGAGGTTCCAAGAGATTAA+TGG | 0.350652 | 4.2:-10376242 | MS.gene059713:CDS |
| ATTATTAATTTCAACATGTC+CGG | 0.359734 | 4.2:-10376716 | None:intergenic |
| TAATGGTGATGATCTTCTTT+GGG | 0.364795 | 4.2:-10376441 | MS.gene059713:CDS |
| GACTTCCTACAGGACTTGTT+TGG | 0.366205 | 4.2:+10376681 | None:intergenic |
| TGTTTGGTTTCTCTTATTCC+CGG | 0.387356 | 4.2:+10376697 | None:intergenic |
| CAATCCCTCCATTAATCTCT+TGG | 0.406112 | 4.2:+10376234 | None:intergenic |
| GATGAAACAGAACATGCAAT+TGG | 0.429214 | 4.2:-10376185 | MS.gene059713:CDS |
| CCTGATGTTGGACTTCCTAC+AGG | 0.434628 | 4.2:+10376671 | None:intergenic |
| ATACGGCTCACGTTGGCAAT+TGG | 0.452960 | 4.2:+10376602 | None:intergenic |
| TCTGAGATGTTTCCTGATGT+TGG | 0.453105 | 4.2:+10376659 | None:intergenic |
| CTTTGGGCTATGACAACACT+TGG | 0.464387 | 4.2:-10376425 | MS.gene059713:CDS |
| AATAATTATAGGGAAATTGA+AGG | 0.468083 | 4.2:-10376365 | MS.gene059713:CDS |
| TCAACCCTGTAACGTAGGTT+TGG | 0.472415 | 4.2:+10376140 | None:intergenic |
| TCAATTGATGTTAATGATGT+TGG | 0.481755 | 4.2:-10376284 | MS.gene059713:CDS |
| CCTGTAGGAAGTCCAACATC+AGG | 0.498605 | 4.2:-10376671 | MS.gene059713:CDS |
| ACCTACGTTACAGGGTTGAA+TGG | 0.502904 | 4.2:-10376136 | MS.gene059713:CDS |
| TTATTAATTTCAACATGTCC+GGG | 0.509564 | 4.2:-10376715 | None:intergenic |
| AGAGATTAATGGAGGGATTG+TGG | 0.513734 | 4.2:-10376231 | MS.gene059713:CDS |
| ACAGAACATGCAATTGGAAG+TGG | 0.518322 | 4.2:-10376179 | MS.gene059713:CDS |
| CTCAAAAGAAGCAAAGGAAA+CGG | 0.525390 | 4.2:-10376546 | MS.gene059713:CDS |
| ATTGATGTTAATGATGTTGG+TGG | 0.525414 | 4.2:-10376281 | MS.gene059713:CDS |
| ACCCTGTAACGTAGGTTTGG+TGG | 0.528618 | 4.2:+10376143 | None:intergenic |
| GATGTTAATGATGTTGGTGG+TGG | 0.530464 | 4.2:-10376278 | MS.gene059713:CDS |
| CATCATCAAAAGAACAAGAC+AGG | 0.530857 | 4.2:-10376631 | MS.gene059713:CDS |
| ATAAGTGCCAGAGAGAAAAG+AGG | 0.537335 | 4.2:-10376472 | MS.gene059713:CDS |
| TTATTAAGATAAACTTTCAA+AGG | 0.539135 | 4.2:+10376383 | None:intergenic |
| GCCACCAAACCTACGTTACA+GGG | 0.557356 | 4.2:-10376144 | MS.gene059713:CDS |
| TAAAATCTCAAAAGAAGCAA+AGG | 0.579705 | 4.2:-10376552 | MS.gene059713:CDS |
| AGAAACCAAACAAGTCCTGT+AGG | 0.592028 | 4.2:-10376686 | MS.gene059713:CDS |
| GGCTCACGTTGGCAATTGGT+AGG | 0.609486 | 4.2:+10376606 | None:intergenic |
| ACCATTCAACCCTGTAACGT+AGG | 0.617328 | 4.2:+10376135 | None:intergenic |
| AGGTTCCAAGAGATTAATGG+AGG | 0.632716 | 4.2:-10376239 | MS.gene059713:CDS |
| GGTTCCAAGAGATTAATGGA+GGG | 0.665223 | 4.2:-10376238 | MS.gene059713:CDS |
| TTTCATTATACGGCTCACGT+TGG | 0.672250 | 4.2:+10376595 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTTTATCTTAATAATTAT+AGG | - | chr4.2:10376458-10376477 | MS.gene059713:CDS | 10.0% |
| !! | AGTTTATCTTAATAATTATA+GGG | - | chr4.2:10376459-10376478 | MS.gene059713:CDS | 10.0% |
| !! | TTATTAAGATAAACTTTCAA+AGG | + | chr4.2:10376454-10376473 | None:intergenic | 15.0% |
| !! | AATAATTATAGGGAAATTGA+AGG | - | chr4.2:10376469-10376488 | MS.gene059713:CDS | 20.0% |
| ! | GAAAAGAGGAAAACAATTAA+TGG | - | chr4.2:10376376-10376395 | MS.gene059713:CDS | 25.0% |
| ! | TAAAATCTCAAAAGAAGCAA+AGG | - | chr4.2:10376282-10376301 | MS.gene059713:CDS | 25.0% |
| ! | TCAATTGATGTTAATGATGT+TGG | - | chr4.2:10376550-10376569 | MS.gene059713:CDS | 25.0% |
| !! | ATTGTGGATTATAGAGTAAT+TGG | - | chr4.2:10376619-10376638 | MS.gene059713:CDS | 25.0% |
| ATTGATGTTAATGATGTTGG+TGG | - | chr4.2:10376553-10376572 | MS.gene059713:CDS | 30.0% | |
| GAGTTCATAAGTTTCATTAC+TGG | - | chr4.2:10376328-10376347 | MS.gene059713:CDS | 30.0% | |
| ! | TAATGGTGATGATCTTCTTT+GGG | - | chr4.2:10376393-10376412 | MS.gene059713:CDS | 30.0% |
| ! | TTAATGGTGATGATCTTCTT+TGG | - | chr4.2:10376392-10376411 | MS.gene059713:CDS | 30.0% |
| !! | GAAGTGCTCTTTTCATTATA+CGG | + | chr4.2:10376252-10376271 | None:intergenic | 30.0% |
| !! | TTTGAGATTTTAGCATTTGC+TGG | + | chr4.2:10376274-10376293 | None:intergenic | 30.0% |
| !!! | CTTGGTTTTGAAAACTATGT+TGG | - | chr4.2:10376427-10376446 | MS.gene059713:CDS | 30.0% |
| AAGAGGTTCCAAGAGATTAA+TGG | - | chr4.2:10376592-10376611 | MS.gene059713:CDS | 35.0% | |
| CATCATCAAAAGAACAAGAC+AGG | - | chr4.2:10376203-10376222 | MS.gene059713:CDS | 35.0% | |
| CTCAAAAGAAGCAAAGGAAA+CGG | - | chr4.2:10376288-10376307 | MS.gene059713:CDS | 35.0% | |
| GATGAAACAGAACATGCAAT+TGG | - | chr4.2:10376649-10376668 | MS.gene059713:CDS | 35.0% | |
| TTAATCTCTTGGAACCTCTT+TGG | + | chr4.2:10376592-10376611 | None:intergenic | 35.0% | |
| ! | TGTTTGGTTTCTCTTATTCC+CGG | + | chr4.2:10376140-10376159 | None:intergenic | 35.0% |
| ! | TTGTTTTCCTCTTTTCTCTC+TGG | + | chr4.2:10376372-10376391 | None:intergenic | 35.0% |
| ACAGAACATGCAATTGGAAG+TGG | - | chr4.2:10376655-10376674 | MS.gene059713:CDS | 40.0% | |
| AGAAACCAAACAAGTCCTGT+AGG | - | chr4.2:10376148-10376167 | MS.gene059713:CDS | 40.0% | |
| AGAGATTAATGGAGGGATTG+TGG | - | chr4.2:10376603-10376622 | MS.gene059713:CDS | 40.0% | |
| AGGTTCCAAGAGATTAATGG+AGG | - | chr4.2:10376595-10376614 | MS.gene059713:CDS | 40.0% | |
| ATAAGTGCCAGAGAGAAAAG+AGG | - | chr4.2:10376362-10376381 | MS.gene059713:CDS | 40.0% | |
| CAATCCCTCCATTAATCTCT+TGG | + | chr4.2:10376603-10376622 | None:intergenic | 40.0% | |
| GGTTCCAAGAGATTAATGGA+GGG | - | chr4.2:10376596-10376615 | MS.gene059713:CDS | 40.0% | |
| TTTCATTATACGGCTCACGT+TGG | + | chr4.2:10376242-10376261 | None:intergenic | 40.0% | |
| ! | GATGTTAATGATGTTGGTGG+TGG | - | chr4.2:10376556-10376575 | MS.gene059713:CDS | 40.0% |
| ! | GTGGATTTTATGCTCCAAAG+AGG | - | chr4.2:10376575-10376594 | MS.gene059713:CDS | 40.0% |
| ! | TCTGAGATGTTTCCTGATGT+TGG | + | chr4.2:10376178-10376197 | None:intergenic | 40.0% |
| ACCATTCAACCCTGTAACGT+AGG | + | chr4.2:10376702-10376721 | None:intergenic | 45.0% | |
| ACCTACGTTACAGGGTTGAA+TGG | - | chr4.2:10376698-10376717 | MS.gene059713:CDS | 45.0% | |
| CTTTGGGCTATGACAACACT+TGG | - | chr4.2:10376409-10376428 | MS.gene059713:CDS | 45.0% | |
| TCAACCCTGTAACGTAGGTT+TGG | + | chr4.2:10376697-10376716 | None:intergenic | 45.0% | |
| ! | GACTTCCTACAGGACTTGTT+TGG | + | chr4.2:10376156-10376175 | None:intergenic | 45.0% |
| ACCCTGTAACGTAGGTTTGG+TGG | + | chr4.2:10376694-10376713 | None:intergenic | 50.0% | |
| ATACGGCTCACGTTGGCAAT+TGG | + | chr4.2:10376235-10376254 | None:intergenic | 50.0% | |
| CCTGATGTTGGACTTCCTAC+AGG | + | chr4.2:10376166-10376185 | None:intergenic | 50.0% | |
| CCTGTAGGAAGTCCAACATC+AGG | - | chr4.2:10376163-10376182 | MS.gene059713:CDS | 50.0% | |
| GCCACCAAACCTACGTTACA+GGG | - | chr4.2:10376690-10376709 | MS.gene059713:CDS | 50.0% | |
| TGCCACCAAACCTACGTTAC+AGG | - | chr4.2:10376689-10376708 | MS.gene059713:CDS | 50.0% | |
| GGCTCACGTTGGCAATTGGT+AGG | + | chr4.2:10376231-10376250 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 10376133 | 10376723 | 10376133 | ID=MS.gene059713 |
| chr4.2 | mRNA | 10376133 | 10376723 | 10376133 | ID=MS.gene059713.t1;Parent=MS.gene059713 |
| chr4.2 | exon | 10376133 | 10376723 | 10376133 | ID=MS.gene059713.t1.exon1;Parent=MS.gene059713.t1 |
| chr4.2 | CDS | 10376133 | 10376723 | 10376133 | ID=cds.MS.gene059713.t1;Parent=MS.gene059713.t1 |
| Gene Sequence |
| Protein sequence |
