Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34910.t1 | RHN42408.1 | 98.1 | 469 | 9 | 0 | 1 | 469 | 1 | 469 | 1.90E-271 | 944.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34910.t1 | Q9FNK4 | 71.3 | 453 | 126 | 2 | 19 | 468 | 23 | 474 | 8.4e-196 | 684.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34910.t1 | A0A396GPS7 | 98.1 | 469 | 9 | 0 | 1 | 469 | 1 | 469 | 1.3e-271 | 944.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene010912 | MS.gene34910 | PPI |
| MS.gene34910 | MS.gene39141 | PPI |
| MS.gene031835 | MS.gene34910 | PPI |
| MS.gene34910 | MS.gene017774 | PPI |
| MS.gene34910 | MS.gene003378 | PPI |
| MS.gene34910 | MS.gene28125 | PPI |
| MS.gene059703 | MS.gene34910 | PPI |
| MS.gene34910 | MS.gene030745 | PPI |
| MS.gene34910 | MS.gene28928 | PPI |
| MS.gene34910 | MS.gene043742 | PPI |
| MS.gene87756 | MS.gene34910 | PPI |
| MS.gene87050 | MS.gene34910 | PPI |
| MS.gene34910 | MS.gene70340 | PPI |
| MS.gene34910 | MS.gene030747 | PPI |
| MS.gene34910 | MS.gene38774 | PPI |
| MS.gene014016 | MS.gene34910 | PPI |
| MS.gene34910 | MS.gene052375 | PPI |
| MS.gene34910 | MS.gene42086 | PPI |
| MS.gene34910 | MS.gene26019 | PPI |
| MS.gene34910 | MS.gene050272 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34910.t1 | MTR_7g451450 | 34.625 | 413 | 248 | 9 | 33 | 438 | 68 | 465 | 6.69e-64 | 214 |
| MS.gene34910.t1 | MTR_7g072420 | 30.864 | 405 | 243 | 13 | 44 | 424 | 75 | 466 | 1.86e-46 | 168 |
| MS.gene34910.t1 | MTR_8g091660 | 29.821 | 446 | 267 | 16 | 26 | 443 | 54 | 481 | 2.02e-46 | 167 |
| MS.gene34910.t1 | MTR_3g465800 | 28.829 | 444 | 278 | 15 | 21 | 440 | 41 | 470 | 2.25e-44 | 162 |
| MS.gene34910.t1 | MTR_3g465800 | 29.950 | 404 | 248 | 14 | 58 | 440 | 10 | 399 | 1.55e-42 | 155 |
| MS.gene34910.t1 | MTR_4g076100 | 26.714 | 423 | 249 | 13 | 52 | 427 | 81 | 489 | 3.47e-36 | 140 |
| MS.gene34910.t1 | MTR_3g118070 | 30.671 | 313 | 192 | 8 | 52 | 352 | 19 | 318 | 2.01e-33 | 130 |
| MS.gene34910.t1 | MTR_3g118070 | 30.671 | 313 | 192 | 8 | 52 | 352 | 76 | 375 | 3.41e-33 | 131 |
| MS.gene34910.t1 | MTR_4g076100 | 27.515 | 338 | 189 | 11 | 132 | 427 | 22 | 345 | 1.21e-30 | 122 |
| MS.gene34910.t1 | MTR_4g128620 | 26.383 | 235 | 156 | 7 | 218 | 437 | 587 | 819 | 6.28e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34910.t1 | AT5G46180 | 72.581 | 434 | 118 | 1 | 36 | 469 | 43 | 475 | 0.0 | 681 |
| MS.gene34910.t1 | AT1G80600 | 33.333 | 411 | 258 | 7 | 30 | 436 | 55 | 453 | 7.37e-65 | 216 |
| MS.gene34910.t1 | AT4G39660 | 29.882 | 425 | 255 | 14 | 44 | 443 | 70 | 476 | 2.27e-46 | 167 |
| MS.gene34910.t1 | AT4G39660 | 29.904 | 418 | 250 | 14 | 51 | 443 | 2 | 401 | 1.39e-45 | 164 |
| MS.gene34910.t1 | AT2G38400 | 29.873 | 395 | 243 | 10 | 52 | 424 | 80 | 462 | 3.22e-44 | 162 |
| MS.gene34910.t1 | AT2G38400 | 29.620 | 395 | 244 | 10 | 52 | 424 | 80 | 462 | 3.29e-44 | 162 |
| MS.gene34910.t1 | AT3G08860 | 28.924 | 446 | 269 | 15 | 21 | 437 | 49 | 475 | 6.82e-44 | 161 |
| MS.gene34910.t1 | AT3G08860 | 29.099 | 433 | 263 | 14 | 21 | 424 | 49 | 466 | 1.17e-43 | 160 |
| MS.gene34910.t1 | AT3G22200 | 28.947 | 418 | 247 | 14 | 52 | 427 | 70 | 479 | 4.73e-37 | 142 |
| MS.gene34910.t1 | AT3G22200 | 28.947 | 418 | 247 | 14 | 52 | 427 | 79 | 488 | 5.80e-37 | 142 |
| MS.gene34910.t1 | AT5G63570 | 29.814 | 322 | 200 | 9 | 52 | 360 | 19 | 327 | 4.13e-31 | 124 |
| MS.gene34910.t1 | AT5G63570 | 29.814 | 322 | 200 | 9 | 52 | 360 | 82 | 390 | 7.11e-31 | 124 |
| MS.gene34910.t1 | AT3G48730 | 29.193 | 322 | 202 | 9 | 52 | 360 | 80 | 388 | 2.24e-28 | 117 |
Find 119 sgRNAs with CRISPR-Local
Find 325 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGCATAGCTGCATTTATTT+TGG | 0.157532 | 4.1:-15996574 | MS.gene34910:CDS |
| GGCCATCTTAAAGTTGATTT+TGG | 0.199551 | 4.1:-15996747 | MS.gene34910:CDS |
| TTAAGATGGCCTGGCATTAA+AGG | 0.213274 | 4.1:+15996759 | None:intergenic |
| GCTGGAGGAGCAGCATCTTT+TGG | 0.213355 | 4.1:+15992893 | None:intergenic |
| AATCATCAACACGTTATATT+TGG | 0.227981 | 4.1:+15995339 | None:intergenic |
| TTTCTACAATGATCGCTTTC+CGG | 0.238262 | 4.1:-15997238 | MS.gene34910:CDS |
| GAAAGTTTGTCCCCTGTATC+AGG | 0.309360 | 4.1:-15993525 | MS.gene34910:CDS |
| AATGAAGCTACCCGTGGTTT+TGG | 0.314723 | 4.1:-15996783 | MS.gene34910:CDS |
| ATTCTTTGTCGATGATTGTT+TGG | 0.326759 | 4.1:+15998122 | None:intergenic |
| CGCACCTCCTTCACATGGTC+CGG | 0.342009 | 4.1:+15993585 | None:intergenic |
| CGAGAAGCTCACCTCCCATT+TGG | 0.348974 | 4.1:+15993637 | None:intergenic |
| CTTAATTCAAAGCCTGATAC+AGG | 0.361779 | 4.1:+15993513 | None:intergenic |
| TCTGCAAGAACTGCGCTAAC+TGG | 0.362917 | 4.1:+15994493 | None:intergenic |
| TACAGAGGAACCAGAACTTT+TGG | 0.363782 | 4.1:-15998178 | MS.gene34910:CDS |
| TCATGTTGTGGCTGCTTCAA+TGG | 0.367473 | 4.1:-15996840 | MS.gene34910:CDS |
| CATAGTTATACCTCATTGTT+GGG | 0.368104 | 4.1:+15997090 | None:intergenic |
| AGCCTTGTTTGGTTATGATA+TGG | 0.380865 | 4.1:-15997196 | MS.gene34910:CDS |
| TTCTTTGTCGATGATTGTTT+GGG | 0.389344 | 4.1:+15998123 | None:intergenic |
| TGGCTACTCTGCAGTTAATC+AGG | 0.391203 | 4.1:-15997682 | MS.gene34910:intron |
| TGTGGCAACACCAAAAGTTC+TGG | 0.395603 | 4.1:+15998168 | None:intergenic |
| GAACCTATCCAAGGGGAAGC+TGG | 0.400196 | 4.1:-15996552 | MS.gene34910:CDS |
| TCATAGTTATACCTCATTGT+TGG | 0.402470 | 4.1:+15997089 | None:intergenic |
| TCAATATATTTGTTTCCCTC+TGG | 0.406966 | 4.1:+15997714 | None:intergenic |
| CGAGGGCCTTAGAACCTTGT+TGG | 0.409141 | 4.1:+15992960 | None:intergenic |
| TGAGATCCAACAAGGTTCTA+AGG | 0.410990 | 4.1:-15992966 | MS.gene34910:CDS |
| ACAGCTTTCAAATAACCATC+TGG | 0.413613 | 4.1:+15995376 | None:intergenic |
| GAGAAGCTCACCTCCCATTT+GGG | 0.418819 | 4.1:+15993638 | None:intergenic |
| TGCTTCAATGGTCGTACATT+GGG | 0.424592 | 4.1:-15996828 | MS.gene34910:CDS |
| AAAGATGCTGCTCCTCCAGC+TGG | 0.425140 | 4.1:-15992890 | MS.gene34910:CDS |
| TCAGATACTAGGGAAAGCTT+TGG | 0.426949 | 4.1:-15994530 | MS.gene34910:intron |
| GAGTATTTGACAGCCTTGTT+TGG | 0.427807 | 4.1:-15997207 | MS.gene34910:CDS |
| TCTTAAAGCTTTAAAAGATC+AGG | 0.428054 | 4.1:-15997289 | MS.gene34910:CDS |
| TTTGCATGAGCAAATACAAT+AGG | 0.428807 | 4.1:+15997756 | None:intergenic |
| CAGATACTAGGGAAAGCTTT+GGG | 0.440625 | 4.1:-15994529 | MS.gene34910:CDS |
| TGAACACCAACCACTACATC+TGG | 0.440669 | 4.1:+15995247 | None:intergenic |
| CCTTCAGCACCAGTATTCAT+AGG | 0.441808 | 4.1:+15997168 | None:intergenic |
| GTGAAGGAGGTGCGGGGAAG+AGG | 0.443048 | 4.1:-15993576 | MS.gene34910:CDS |
| TAAGGCCCTCGCTGATGTGC+TGG | 0.445290 | 4.1:-15992948 | MS.gene34910:CDS |
| CGTTGTGGTCGAGTCGTGTA+TGG | 0.450567 | 4.1:-15992851 | MS.gene34910:CDS |
| ATTGCTGATGAAATACAAAC+TGG | 0.456192 | 4.1:-15995319 | MS.gene34910:CDS |
| CGGGGAAGAGGACTGTTCAT+TGG | 0.461273 | 4.1:-15993564 | MS.gene34910:CDS |
| AACCTATCCAAGGGGAAGCT+GGG | 0.467176 | 4.1:-15996551 | MS.gene34910:CDS |
| ATTGTATTTGCTCATGCAAA+GGG | 0.473811 | 4.1:-15997753 | MS.gene34910:CDS |
| GGACCATGTGAAGGAGGTGC+GGG | 0.476342 | 4.1:-15993583 | MS.gene34910:CDS |
| CAAACTGGATTAGCAAGAAC+AGG | 0.479961 | 4.1:-15995304 | MS.gene34910:CDS |
| ATTGGACAGATCTACCCAAA+TGG | 0.483780 | 4.1:-15993652 | MS.gene34910:intron |
| CTAGGGAAAGCTTTGGGTGG+AGG | 0.491794 | 4.1:-15994523 | MS.gene34910:CDS |
| TTAAACCTTCCATGCTGTCC+AGG | 0.491922 | 4.1:+15994445 | None:intergenic |
| CTTTAAAAGATCAGGCAGAC+AGG | 0.501503 | 4.1:-15997281 | MS.gene34910:CDS |
| CAAATGGGAGGTGAGCTTCT+CGG | 0.504493 | 4.1:-15993636 | MS.gene34910:CDS |
| AACATACCCCAGCTTCCCCT+TGG | 0.504988 | 4.1:+15996544 | None:intergenic |
| CGTTGAAGTTAGCAAGAAAG+TGG | 0.505236 | 4.1:-15997134 | MS.gene34910:CDS |
| CCACAACGATCACATGCACT+AGG | 0.505325 | 4.1:+15992866 | None:intergenic |
| CTGCTTCAATGGTCGTACAT+TGG | 0.506187 | 4.1:-15996829 | MS.gene34910:CDS |
| TTGGGAAGATGAAGAAGCGT+TGG | 0.508848 | 4.1:+15998141 | None:intergenic |
| TTTCTTACCTTATGCACAGT+GGG | 0.509433 | 4.1:+15993424 | None:intergenic |
| ATGGCAACTGCACTGGCCAA+TGG | 0.511220 | 4.1:+15993926 | None:intergenic |
| TGAGGCAATGGCAACTGCAC+TGG | 0.516585 | 4.1:+15993919 | None:intergenic |
| CACCAAAATCAACTTTAAGA+TGG | 0.516646 | 4.1:+15996745 | None:intergenic |
| TATTGTATTTGCTCATGCAA+AGG | 0.517613 | 4.1:-15997754 | MS.gene34910:CDS |
| GCTCTTATTGTCTCATGTTG+TGG | 0.519417 | 4.1:-15996852 | MS.gene34910:CDS |
| AAATCAACTTTAAGATGGCC+TGG | 0.519591 | 4.1:+15996750 | None:intergenic |
| TCACATGCACTAGGGCCAGC+TGG | 0.522239 | 4.1:+15992875 | None:intergenic |
| CAGCTTTCAAATAACCATCT+GGG | 0.525779 | 4.1:+15995377 | None:intergenic |
| TTGGACAGATCTACCCAAAT+GGG | 0.526655 | 4.1:-15993651 | MS.gene34910:intron |
| TGAGCAAATACAATAGGAAG+TGG | 0.526855 | 4.1:+15997762 | None:intergenic |
| ATGGTACTTCCTATGAATAC+TGG | 0.531481 | 4.1:-15997177 | MS.gene34910:CDS |
| GCACCTCCTTCACATGGTCC+GGG | 0.537138 | 4.1:+15993586 | None:intergenic |
| TGCAAAGGGATCAGCTGTGT+GGG | 0.540779 | 4.1:-15997739 | MS.gene34910:CDS |
| TTCTTTGATCACTTCAAGTG+AGG | 0.543995 | 4.1:+15993901 | None:intergenic |
| TGGGAAGATGAAGAAGCGTT+GGG | 0.548907 | 4.1:+15998142 | None:intergenic |
| GATCACTTCAAGTGAGGCAA+TGG | 0.551674 | 4.1:+15993907 | None:intergenic |
| AATTGTGTCATGTGTTGACT+TGG | 0.561328 | 4.1:+15993461 | None:intergenic |
| TTCCCCGCACCTCCTTCACA+TGG | 0.564937 | 4.1:+15993580 | None:intergenic |
| ATCAGCTGTGTGGGATCCAG+AGG | 0.565766 | 4.1:-15997730 | MS.gene34910:CDS |
| TGTATAAAACCTGGACAGCA+TGG | 0.573539 | 4.1:-15994454 | MS.gene34910:CDS |
| CAAATACAATAGGAAGTGGA+TGG | 0.580722 | 4.1:+15997766 | None:intergenic |
| GTCAAATACTCAGCAAACAC+CGG | 0.582762 | 4.1:+15997219 | None:intergenic |
| GAATACTGGTGCTGAAGGTG+TGG | 0.583184 | 4.1:-15997163 | MS.gene34910:CDS |
| TAAAACCTGGACAGCATGGA+AGG | 0.583742 | 4.1:-15994450 | MS.gene34910:intron |
| ACCCCAGCTTCCCCTTGGAT+AGG | 0.586113 | 4.1:+15996549 | None:intergenic |
| ACCTATCCAAGGGGAAGCTG+GGG | 0.586910 | 4.1:-15996550 | MS.gene34910:intron |
| AGCTTTCAAATAACCATCTG+GGG | 0.599511 | 4.1:+15995378 | None:intergenic |
| GTGATGCTTTGTATAAAACC+TGG | 0.600068 | 4.1:-15994463 | MS.gene34910:CDS |
| CGGACCATGTGAAGGAGGTG+CGG | 0.603381 | 4.1:-15993584 | MS.gene34910:CDS |
| TAATTCAAAGCCTGATACAG+GGG | 0.605478 | 4.1:+15993515 | None:intergenic |
| GTTGAAGTTAGCAAGAAAGT+GGG | 0.607885 | 4.1:-15997133 | MS.gene34910:CDS |
| TTAATTCAAAGCCTGATACA+GGG | 0.608427 | 4.1:+15993514 | None:intergenic |
| AGAAGTTCGTCCAGATGTAG+TGG | 0.615199 | 4.1:-15995257 | MS.gene34910:intron |
| TGAAGAAGCGTTGGGTTGTG+TGG | 0.618995 | 4.1:+15998150 | None:intergenic |
| CACAACGATCACATGCACTA+GGG | 0.624398 | 4.1:+15992867 | None:intergenic |
| AATTTCCAGCACATCAGCGA+GGG | 0.626318 | 4.1:+15992943 | None:intergenic |
| GACCATGTGAAGGAGGTGCG+GGG | 0.627725 | 4.1:-15993582 | MS.gene34910:CDS |
| GCATTAAAGGACCAAAACCA+CGG | 0.628989 | 4.1:+15996772 | None:intergenic |
| TACCATATCATAACCAAACA+AGG | 0.631313 | 4.1:+15997194 | None:intergenic |
| ATGCAAAGGGATCAGCTGTG+TGG | 0.641631 | 4.1:-15997740 | MS.gene34910:CDS |
| ACAATACCCGGACCATGTGA+AGG | 0.644513 | 4.1:-15993592 | MS.gene34910:CDS |
| GCTTTCAAATAACCATCTGG+GGG | 0.649011 | 4.1:+15995379 | None:intergenic |
| TCTTACCTTATGCACAGTGG+GGG | 0.652538 | 4.1:+15993426 | None:intergenic |
| CTTTCTTACCTTATGCACAG+TGG | 0.652810 | 4.1:+15993423 | None:intergenic |
| CATTAAAGGACCAAAACCAC+GGG | 0.654497 | 4.1:+15996773 | None:intergenic |
| CCTATGAATACTGGTGCTGA+AGG | 0.655355 | 4.1:-15997168 | MS.gene34910:CDS |
| TTCTTACCTTATGCACAGTG+GGG | 0.660148 | 4.1:+15993425 | None:intergenic |
| GAAGATTCAGAAACAATACC+CGG | 0.661569 | 4.1:-15993604 | MS.gene34910:CDS |
| GACAGATCTACCCAAATGGG+AGG | 0.666226 | 4.1:-15993648 | MS.gene34910:intron |
| ATACTAGGGAAAGCTTTGGG+TGG | 0.669588 | 4.1:-15994526 | MS.gene34910:CDS |
| CCAAAATAAATGCAGCTATG+CGG | 0.671952 | 4.1:+15996574 | None:intergenic |
| AGATCAGGCAGACAGGCTGA+CGG | 0.672284 | 4.1:-15997274 | MS.gene34910:CDS |
| CATGCACTAGGGCCAGCTGG+AGG | 0.674851 | 4.1:+15992878 | None:intergenic |
| ATACCCGGACCATGTGAAGG+AGG | 0.676758 | 4.1:-15993589 | MS.gene34910:CDS |
| TCAGCTGTGTGGGATCCAGA+GGG | 0.679081 | 4.1:-15997729 | MS.gene34910:CDS |
| AAGAAGAGAGACTTGCTGAG+AGG | 0.679464 | 4.1:-15993883 | MS.gene34910:intron |
| TGTGACAATGAAGCTACCCG+TGG | 0.679963 | 4.1:-15996789 | MS.gene34910:CDS |
| CCTAGTGCATGTGATCGTTG+TGG | 0.687700 | 4.1:-15992866 | MS.gene34910:CDS |
| TTGAAGTTAGCAAGAAAGTG+GGG | 0.692526 | 4.1:-15997132 | MS.gene34910:CDS |
| AGTGCGGATGAGATCCAACA+AGG | 0.696962 | 4.1:-15992974 | MS.gene34910:CDS |
| CTTTCAAATAACCATCTGGG+GGG | 0.711042 | 4.1:+15995380 | None:intergenic |
| CAATTTCCAGCACATCAGCG+AGG | 0.712817 | 4.1:+15992942 | None:intergenic |
| CTTTCTTGCTAACTTCAACG+CGG | 0.721978 | 4.1:+15997137 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTAATGTTATGAAAAA+TGG | - | chr4.1:15995518-15995537 | MS.gene34910:intron | 10.0% |
| !! | AATTAATTGTTTATTAAAGA+AGG | - | chr4.1:15997052-15997071 | MS.gene34910:intron | 10.0% |
| !! | ATATTAATGTTATGAAAAAT+GGG | - | chr4.1:15995519-15995538 | MS.gene34910:intron | 10.0% |
| !! | TTGAATAAATTTATTTCATT+AGG | - | chr4.1:15997250-15997269 | MS.gene34910:CDS | 10.0% |
| !!! | AAATATATTGATTTTTTATC+TGG | - | chr4.1:15993365-15993384 | MS.gene34910:intron | 10.0% |
| !!! | ATTTTAATGAATGAAATTAT+CGG | + | chr4.1:15997030-15997049 | None:intergenic | 10.0% |
| !!! | TTTATTAGTTTAATATATGA+AGG | + | chr4.1:15993092-15993111 | None:intergenic | 10.0% |
| !!! | TTTTTTATTCCTTAATTTTT+GGG | - | chr4.1:15993680-15993699 | MS.gene34910:intron | 10.0% |
| !! | AAAAATAAATAACCATTACA+AGG | + | chr4.1:15996931-15996950 | None:intergenic | 15.0% |
| !! | AAACTATTATACTTCATAAA+TGG | + | chr4.1:15995354-15995373 | None:intergenic | 15.0% |
| !! | AATAAAAAAAATCAGTTTGA+CGG | + | chr4.1:15995490-15995509 | None:intergenic | 15.0% |
| !! | ATAAGAATAGAAAATAGAAT+CGG | + | chr4.1:15994860-15994879 | None:intergenic | 15.0% |
| !! | ATGATGAATAAATATAAATG+AGG | + | chr4.1:15997752-15997771 | None:intergenic | 15.0% |
| !! | CAAAAATTAAGGAATAAAAA+AGG | + | chr4.1:15993681-15993700 | None:intergenic | 15.0% |
| !! | TACAGAATAAAAAAGAAAAA+GGG | + | chr4.1:15996457-15996476 | None:intergenic | 15.0% |
| !! | TCTGAACTTAAATTATTAAA+AGG | + | chr4.1:15995965-15995984 | None:intergenic | 15.0% |
| !! | TTACAGAATAAAAAAGAAAA+AGG | + | chr4.1:15996458-15996477 | None:intergenic | 15.0% |
| !!! | CTTTTTTATTCCTTAATTTT+TGG | - | chr4.1:15993679-15993698 | MS.gene34910:intron | 15.0% |
| !!! | TTTAAAGCTTTAAGAATTTT+AGG | + | chr4.1:15993773-15993792 | None:intergenic | 15.0% |
| !!! | TTTTAATAATTTAAGTTCAG+AGG | - | chr4.1:15995964-15995983 | MS.gene34910:intron | 15.0% |
| !!! | TTTTCTTATATTATTATCAC+CGG | - | chr4.1:15993500-15993519 | MS.gene34910:CDS | 15.0% |
| !! | AAGAAAGTTAAAGAAATTAG+TGG | + | chr4.1:15996512-15996531 | None:intergenic | 20.0% |
| !! | AAGAAATTAGTGGTATAAAA+AGG | + | chr4.1:15996502-15996521 | None:intergenic | 20.0% |
| !! | AATAAATATAAATGAGGCAA+TGG | + | chr4.1:15997746-15997765 | None:intergenic | 20.0% |
| !! | AATAGAAAATAGAATCAGTT+AGG | + | chr4.1:15994855-15994874 | None:intergenic | 20.0% |
| !! | AATTATTGAAATTGAAAGCT+AGG | - | chr4.1:15997840-15997859 | MS.gene34910:intron | 20.0% |
| !! | AGGAAAAACTAGATATAATA+TGG | + | chr4.1:15996248-15996267 | None:intergenic | 20.0% |
| !! | ATAGAAAATAGAATCAGTTA+GGG | + | chr4.1:15994854-15994873 | None:intergenic | 20.0% |
| !! | ATCAAGATATTACAACTATT+AGG | + | chr4.1:15994015-15994034 | None:intergenic | 20.0% |
| !! | ATTCTGTTATTATGAAATGT+TGG | - | chr4.1:15995115-15995134 | MS.gene34910:intron | 20.0% |
| !! | CATACATAATATTACATTCT+CGG | + | chr4.1:15995381-15995400 | None:intergenic | 20.0% |
| !! | GAAAAGTAACAGAAAAAAAA+AGG | + | chr4.1:15997101-15997120 | None:intergenic | 20.0% |
| !! | TAAAAAAAAATCCATCCTAT+GGG | - | chr4.1:15996950-15996969 | MS.gene34910:intron | 20.0% |
| !! | TAACGTCATATAAAAAAATG+TGG | + | chr4.1:15995646-15995665 | None:intergenic | 20.0% |
| !! | TATAGTGAAAAATGAAAACA+AGG | + | chr4.1:15997815-15997834 | None:intergenic | 20.0% |
| !! | TCTCATTTAAAAAATCCAAA+TGG | + | chr4.1:15994139-15994158 | None:intergenic | 20.0% |
| !! | TGAATTAAGTGAAAAATTGA+AGG | - | chr4.1:15997568-15997587 | MS.gene34910:intron | 20.0% |
| !! | TTAAAAAAAAATCCATCCTA+TGG | - | chr4.1:15996949-15996968 | MS.gene34910:intron | 20.0% |
| !! | TTAATCAGGTATAAATTGAA+CGG | - | chr4.1:15993399-15993418 | MS.gene34910:intron | 20.0% |
| !!! | AAGCATTATTTCTTTTATCT+AGG | + | chr4.1:15997964-15997983 | None:intergenic | 20.0% |
| !!! | ATGACGTTATATTTTTTTAC+AGG | - | chr4.1:15995657-15995676 | MS.gene34910:intron | 20.0% |
| !!! | TGGATTTTTTAAATGAGATT+CGG | - | chr4.1:15994141-15994160 | MS.gene34910:intron | 20.0% |
| ! | AAAACAGAGAATATTATGGT+TGG | - | chr4.1:15996150-15996169 | MS.gene34910:intron | 25.0% |
| ! | AAAGATTTGATTACTGTGAA+TGG | - | chr4.1:15997928-15997947 | MS.gene34910:intron | 25.0% |
| ! | AAATCCTAGACCAAAATATT+AGG | + | chr4.1:15998053-15998072 | None:intergenic | 25.0% |
| ! | AACTTAAGACATTGCTTAAA+TGG | + | chr4.1:15997679-15997698 | None:intergenic | 25.0% |
| ! | AATCATCAACACGTTATATT+TGG | + | chr4.1:15995731-15995750 | None:intergenic | 25.0% |
| ! | AATCCTAGACCAAAATATTA+GGG | + | chr4.1:15998052-15998071 | None:intergenic | 25.0% |
| ! | ACAAGAAAACAATAAACGAA+TGG | + | chr4.1:15996672-15996691 | None:intergenic | 25.0% |
| ! | ACAGAATATATAAGAGGTAA+AGG | + | chr4.1:15995846-15995865 | None:intergenic | 25.0% |
| ! | AGAGATACAGAATATATAAG+AGG | + | chr4.1:15995852-15995871 | None:intergenic | 25.0% |
| ! | ATAGAAAATAGAATCGGTAA+AGG | + | chr4.1:15995227-15995246 | None:intergenic | 25.0% |
| ! | ATCTCAGAAATTGCTTATAT+AGG | - | chr4.1:15995150-15995169 | MS.gene34910:intron | 25.0% |
| ! | ATTCTGTTATTGTGAAATGA+TGG | - | chr4.1:15994742-15994761 | MS.gene34910:intron | 25.0% |
| ! | GATAAAAGAAATAATGCTTC+TGG | - | chr4.1:15997965-15997984 | MS.gene34910:intron | 25.0% |
| ! | GTGAAAAAACAAACATAAGT+TGG | + | chr4.1:15996400-15996419 | None:intergenic | 25.0% |
| ! | TCACAAAAAAGAGAAACTTA+TGG | - | chr4.1:15996416-15996435 | MS.gene34910:intron | 25.0% |
| ! | TCTCAGAAATTGCTTATATA+GGG | - | chr4.1:15995151-15995170 | MS.gene34910:intron | 25.0% |
| ! | TGGTAAAACAGAGAATATTA+TGG | - | chr4.1:15996146-15996165 | MS.gene34910:intron | 25.0% |
| ! | TTCATAAGCATAACTAGATT+AGG | + | chr4.1:15997878-15997897 | None:intergenic | 25.0% |
| !! | AAAAACAAACATAAGTTGGA+TGG | + | chr4.1:15996396-15996415 | None:intergenic | 25.0% |
| !! | ATCTAAGATATTGCTTATAG+AGG | - | chr4.1:15994777-15994796 | MS.gene34910:intron | 25.0% |
| !! | TCTAAGATATTGCTTATAGA+GGG | - | chr4.1:15994778-15994797 | MS.gene34910:intron | 25.0% |
| !! | TGTAAATGTCCCTAATATTT+TGG | - | chr4.1:15998040-15998059 | MS.gene34910:intron | 25.0% |
| !!! | AATGTACCGTTTTTGAATTT+CGG | - | chr4.1:15995303-15995322 | MS.gene34910:CDS | 25.0% |
| !!! | CTTTTTTTAATCACTCCATT+GGG | - | chr4.1:15993119-15993138 | MS.gene34910:intron | 25.0% |
| !!! | GTCACTTGTTTTATCTTAAA+TGG | - | chr4.1:15994653-15994672 | MS.gene34910:intron | 25.0% |
| !!! | GTTAGTCTTATATATTGATC+TGG | - | chr4.1:15997318-15997337 | MS.gene34910:intron | 25.0% |
| !!! | TCTTAAAGCTTTAAAAGATC+AGG | - | chr4.1:15993778-15993797 | MS.gene34910:intron | 25.0% |
| !!! | TCTTTTTTTAATCACTCCAT+TGG | - | chr4.1:15993118-15993137 | MS.gene34910:intron | 25.0% |
| !!! | TTCTTTTGATTCAGATACTA+GGG | - | chr4.1:15996527-15996546 | MS.gene34910:intron | 25.0% |
| !!! | TTGCATTTTTCAAAATTGTC+CGG | - | chr4.1:15994038-15994057 | MS.gene34910:intron | 25.0% |
| !!! | TTTCTTTTGATTCAGATACT+AGG | - | chr4.1:15996526-15996545 | MS.gene34910:intron | 25.0% |
| !!! | TTTTTTGTAGCTATACCATT+TGG | - | chr4.1:15994121-15994140 | MS.gene34910:intron | 25.0% |
| AACAGAACAGAAGAAAACAA+GGG | + | chr4.1:15993002-15993021 | None:intergenic | 30.0% | |
| AAGAAATCAATGCAAAAGTG+AGG | + | chr4.1:15996994-15997013 | None:intergenic | 30.0% | |
| AAGCAAATATTTAGCATCAC+CGG | + | chr4.1:15994060-15994079 | None:intergenic | 30.0% | |
| AAGGGAAAGATATATACTTG+TGG | + | chr4.1:15992984-15993003 | None:intergenic | 30.0% | |
| AGGGAAAGATATATACTTGT+GGG | + | chr4.1:15992983-15993002 | None:intergenic | 30.0% | |
| AGTGAAAAATTGAAGGATAG+AGG | - | chr4.1:15997575-15997594 | MS.gene34910:intron | 30.0% | |
| ATGTTTATAGCGAAGTACAA+GGG | + | chr4.1:15995883-15995902 | None:intergenic | 30.0% | |
| ATTCTTTGTCGATGATTGTT+TGG | + | chr4.1:15992948-15992967 | None:intergenic | 30.0% | |
| ATTGCTGATGAAATACAAAC+TGG | - | chr4.1:15995748-15995767 | MS.gene34910:intron | 30.0% | |
| ATTGTATTTGCTCATGCAAA+GGG | - | chr4.1:15993314-15993333 | MS.gene34910:intron | 30.0% | |
| ATTTGATTACTGTGAATGGT+AGG | - | chr4.1:15997932-15997951 | MS.gene34910:intron | 30.0% | |
| CAATAGTTGTCAAACATAGA+AGG | - | chr4.1:15996692-15996711 | MS.gene34910:intron | 30.0% | |
| CAATGGTGAAAGTTACAAAT+AGG | + | chr4.1:15997729-15997748 | None:intergenic | 30.0% | |
| CAGATATATAAGAGATATGC+TGG | + | chr4.1:15995265-15995284 | None:intergenic | 30.0% | |
| CATAGTTATACCTCATTGTT+GGG | + | chr4.1:15993980-15993999 | None:intergenic | 30.0% | |
| CATCATACAAAGGAACATAT+TGG | + | chr4.1:15994595-15994614 | None:intergenic | 30.0% | |
| CTTGCAAAGACTAAATCATA+TGG | + | chr4.1:15994999-15995018 | None:intergenic | 30.0% | |
| GAAAAAAATTCCCAACAATG+AGG | - | chr4.1:15993967-15993986 | MS.gene34910:intron | 30.0% | |
| GAATCGTATGATATGGTTAA+AGG | + | chr4.1:15996097-15996116 | None:intergenic | 30.0% | |
| GAGAGACTCAGAAATAAAAA+TGG | + | chr4.1:15993036-15993055 | None:intergenic | 30.0% | |
| GTAACACCGAAATTCAAAAA+CGG | + | chr4.1:15995312-15995331 | None:intergenic | 30.0% | |
| GTCTTGATTTAACCTTGTAA+TGG | - | chr4.1:15996916-15996935 | MS.gene34910:intron | 30.0% | |
| GTTAAATCAAGACATGCAAA+CGG | + | chr4.1:15996909-15996928 | None:intergenic | 30.0% | |
| TACCATATCATAACCAAACA+AGG | + | chr4.1:15993876-15993895 | None:intergenic | 30.0% | |
| TAGCATTAGTAAACAGGATT+TGG | + | chr4.1:15993650-15993669 | None:intergenic | 30.0% | |
| TATTGTATTTGCTCATGCAA+AGG | - | chr4.1:15993313-15993332 | MS.gene34910:intron | 30.0% | |
| TCAATATATTTGTTTCCCTC+TGG | + | chr4.1:15993356-15993375 | None:intergenic | 30.0% | |
| TCAGCAAAAGTAAATTGACA+CGG | + | chr4.1:15994179-15994198 | None:intergenic | 30.0% | |
| TCATAGTTATACCTCATTGT+TGG | + | chr4.1:15993981-15994000 | None:intergenic | 30.0% | |
| TGATATGGTTAAAGGAAGTA+AGG | + | chr4.1:15996089-15996108 | None:intergenic | 30.0% | |
| TGTGGAAAAGATGATATGTT+TGG | + | chr4.1:15995628-15995647 | None:intergenic | 30.0% | |
| TTAATTCAAAGCCTGATACA+GGG | + | chr4.1:15997556-15997575 | None:intergenic | 30.0% | |
| TTCTTTGTCGATGATTGTTT+GGG | + | chr4.1:15992947-15992966 | None:intergenic | 30.0% | |
| TTTCTATTTCCTTTGTGAAC+TGG | - | chr4.1:15993609-15993628 | MS.gene34910:CDS | 30.0% | |
| TTTGCATGAGCAAATACAAT+AGG | + | chr4.1:15993314-15993333 | None:intergenic | 30.0% | |
| ! | ATGATTTAGTCTTTGCAAGA+AGG | - | chr4.1:15995000-15995019 | MS.gene34910:intron | 30.0% |
| ! | CACCAAAATCAACTTTAAGA+TGG | + | chr4.1:15994325-15994344 | None:intergenic | 30.0% |
| ! | CTTGTACTTTTGTGTTTTAC+TGG | - | chr4.1:15996126-15996145 | MS.gene34910:intron | 30.0% |
| ! | TATTCTGTAACCTTTTTCTG+AGG | - | chr4.1:15996468-15996487 | MS.gene34910:intron | 30.0% |
| ! | TCGTCTTTTCCCAAAAATTA+AGG | + | chr4.1:15993692-15993711 | None:intergenic | 30.0% |
| !! | AAAGGAAGTAAGGTATCTTT+TGG | + | chr4.1:15996079-15996098 | None:intergenic | 30.0% |
| !! | TATGAAGGTTGATTAGCTTA+AGG | + | chr4.1:15993077-15993096 | None:intergenic | 30.0% |
| !! | TGTCAATTTACTTTTGCTGA+TGG | - | chr4.1:15994179-15994198 | MS.gene34910:intron | 30.0% |
| !!! | AGTGTATGTCATTTTTCTTC+AGG | - | chr4.1:15993736-15993755 | MS.gene34910:intron | 30.0% |
| !!! | ATAGAGTTACTTTTTTCCTG+AGG | - | chr4.1:15994957-15994976 | MS.gene34910:intron | 30.0% |
| !!! | GTGTATGTCATTTTTCTTCA+GGG | - | chr4.1:15993737-15993756 | MS.gene34910:intron | 30.0% |
| !!! | GTTACTTTTCACAGTACTTT+TGG | - | chr4.1:15997111-15997130 | MS.gene34910:CDS | 30.0% |
| !!! | TTATTTTGGAACCTATCCAA+GGG | - | chr4.1:15994507-15994526 | MS.gene34910:CDS | 30.0% |
| !!! | TTTATTTTGGAACCTATCCA+AGG | - | chr4.1:15994506-15994525 | MS.gene34910:CDS | 30.0% |
| AAACCATCTTCATTCATCTG+AGG | + | chr4.1:15993580-15993599 | None:intergenic | 35.0% | |
| AACCATCTTCATTCATCTGA+GGG | + | chr4.1:15993579-15993598 | None:intergenic | 35.0% | |
| AAGCAGTAGCATTAGTAAAC+AGG | + | chr4.1:15993656-15993675 | None:intergenic | 35.0% | |
| AAGTAACCTAATCCTTTGAG+AGG | + | chr4.1:15998014-15998033 | None:intergenic | 35.0% | |
| ACAGCTTTCAAATAACCATC+TGG | + | chr4.1:15995694-15995713 | None:intergenic | 35.0% | |
| AGCTTTCAAATAACCATCTG+GGG | + | chr4.1:15995692-15995711 | None:intergenic | 35.0% | |
| AGTTTCTGATGCATATTCAC+AGG | + | chr4.1:15996277-15996296 | None:intergenic | 35.0% | |
| ATGGTACTTCCTATGAATAC+TGG | - | chr4.1:15993890-15993909 | MS.gene34910:CDS | 35.0% | |
| ATTAGATCATGAACGAAAGC+CGG | + | chr4.1:15995444-15995463 | None:intergenic | 35.0% | |
| CAAAAACGGTACATTTCACA+TGG | + | chr4.1:15995298-15995317 | None:intergenic | 35.0% | |
| CAAATACAATAGGAAGTGGA+TGG | + | chr4.1:15993304-15993323 | None:intergenic | 35.0% | |
| CAATAAACTCCAGTTCACAA+AGG | + | chr4.1:15993621-15993640 | None:intergenic | 35.0% | |
| CAGCTTTCAAATAACCATCT+GGG | + | chr4.1:15995693-15995712 | None:intergenic | 35.0% | |
| CCAAAATAAATGCAGCTATG+CGG | + | chr4.1:15994496-15994515 | None:intergenic | 35.0% | |
| CTAGGTAGATGCATTTAACT+AGG | - | chr4.1:15996351-15996370 | MS.gene34910:intron | 35.0% | |
| CTTAATTCAAAGCCTGATAC+AGG | + | chr4.1:15997557-15997576 | None:intergenic | 35.0% | |
| GAACAGAACAGAAGAAAACA+AGG | + | chr4.1:15993003-15993022 | None:intergenic | 35.0% | |
| GAAGATTCAGAAACAATACC+CGG | - | chr4.1:15997463-15997482 | MS.gene34910:intron | 35.0% | |
| GATGTTTATAGCGAAGTACA+AGG | + | chr4.1:15995884-15995903 | None:intergenic | 35.0% | |
| GGAAACTAAACCTCAGAAAA+AGG | + | chr4.1:15996481-15996500 | None:intergenic | 35.0% | |
| GTGATGCTTTGTATAAAACC+TGG | - | chr4.1:15996604-15996623 | MS.gene34910:intron | 35.0% | |
| GTTGAAGTTAGCAAGAAAGT+GGG | - | chr4.1:15993934-15993953 | MS.gene34910:CDS | 35.0% | |
| TAAAAGTAATCCTTGCAGTG+CGG | - | chr4.1:15998077-15998096 | MS.gene34910:intron | 35.0% | |
| TAATGTGAGAGCTATTCTAC+AGG | + | chr4.1:15995575-15995594 | None:intergenic | 35.0% | |
| TAATTCAAAGCCTGATACAG+GGG | + | chr4.1:15997555-15997574 | None:intergenic | 35.0% | |
| TATAGCTAGTTGAGTACTTC+AGG | - | chr4.1:15997772-15997791 | MS.gene34910:CDS | 35.0% | |
| TCTATTGTGATACATGAGCA+CGG | + | chr4.1:15995048-15995067 | None:intergenic | 35.0% | |
| TGAACTGGAGTTTATTGTTG+TGG | - | chr4.1:15993624-15993643 | MS.gene34910:CDS | 35.0% | |
| TGAGCAAATACAATAGGAAG+TGG | + | chr4.1:15993308-15993327 | None:intergenic | 35.0% | |
| TGCAACTGATGTCTTAGTAT+TGG | - | chr4.1:15997397-15997416 | MS.gene34910:intron | 35.0% | |
| TGCATATTCACAGGAATAGA+AGG | + | chr4.1:15996268-15996287 | None:intergenic | 35.0% | |
| TTACAATCCAAACAACCCAA+TGG | + | chr4.1:15993137-15993156 | None:intergenic | 35.0% | |
| TTCTTTGATCACTTCAAGTG+AGG | + | chr4.1:15997169-15997188 | None:intergenic | 35.0% | |
| TTGAAGTTAGCAAGAAAGTG+GGG | - | chr4.1:15993935-15993954 | MS.gene34910:CDS | 35.0% | |
| TTGAGTTCACATGCACATTA+AGG | - | chr4.1:15997697-15997716 | MS.gene34910:CDS | 35.0% | |
| TTGCGAAGAATCGTATGATA+TGG | + | chr4.1:15996104-15996123 | None:intergenic | 35.0% | |
| TTTCTACAATGATCGCTTTC+CGG | - | chr4.1:15993829-15993848 | MS.gene34910:intron | 35.0% | |
| TTTCTTACCTTATGCACAGT+GGG | + | chr4.1:15997646-15997665 | None:intergenic | 35.0% | |
| ! | AACTAGACATCTTTTTCCTC+AGG | + | chr4.1:15994976-15994995 | None:intergenic | 35.0% |
| ! | AATCCTTTGAGAGGACAAAA+AGG | + | chr4.1:15998005-15998024 | None:intergenic | 35.0% |
| ! | ACTTTTCACAGTACTTTTGG+TGG | - | chr4.1:15997114-15997133 | MS.gene34910:CDS | 35.0% |
| ! | TACTTTTGGTGGAAATCCAT+TGG | - | chr4.1:15997125-15997144 | MS.gene34910:CDS | 35.0% |
| ! | TTGATGCGAAGATTTTACAG+AGG | - | chr4.1:15992874-15992893 | MS.gene34910:CDS | 35.0% |
| ! | TTTTGTCCTCTCAAAGGATT+AGG | - | chr4.1:15998005-15998024 | MS.gene34910:intron | 35.0% |
| !! | AAATCAACTTTAAGATGGCC+TGG | + | chr4.1:15994320-15994339 | None:intergenic | 35.0% |
| !! | AATTGTGTCATGTGTTGACT+TGG | + | chr4.1:15997609-15997628 | None:intergenic | 35.0% |
| !! | AGCCTTGTTTGGTTATGATA+TGG | - | chr4.1:15993871-15993890 | MS.gene34910:intron | 35.0% |
| !! | GGCCATCTTAAAGTTGATTT+TGG | - | chr4.1:15994320-15994339 | MS.gene34910:intron | 35.0% |
| !! | TACAAGTCTTGTGACTTGTT+TGG | - | chr4.1:15994824-15994843 | MS.gene34910:intron | 35.0% |
| !!! | GGCTTCATCTTTTTCAACAT+TGG | + | chr4.1:15998156-15998175 | None:intergenic | 35.0% |
| !!! | TACAAGTCTTGCGACTTTTT+TGG | - | chr4.1:15995197-15995216 | MS.gene34910:intron | 35.0% |
| !!! | TATTTTGGAACCTATCCAAG+GGG | - | chr4.1:15994508-15994527 | MS.gene34910:CDS | 35.0% |
| !!! | TGTCCCTAATATTTTGGTCT+AGG | - | chr4.1:15998046-15998065 | MS.gene34910:intron | 35.0% |
| AACAAAACTCCACCTTCTGT+TGG | - | chr4.1:15996777-15996796 | MS.gene34910:CDS | 40.0% | |
| AACATGAGACAATAAGAGCC+TGG | + | chr4.1:15994214-15994233 | None:intergenic | 40.0% | |
| AAGACCAATCAAGGGGTTTA+AGG | + | chr4.1:15996741-15996760 | None:intergenic | 40.0% | |
| ACACCATAAGACCAATCAAG+GGG | + | chr4.1:15996748-15996767 | None:intergenic | 40.0% | |
| ACGGATCTTGCTAATTACCA+AGG | - | chr4.1:15993418-15993437 | MS.gene34910:intron | 40.0% | |
| AGACCAATCAAGGGGTTTAA+GGG | + | chr4.1:15996740-15996759 | None:intergenic | 40.0% | |
| AGACTTCTGATTCCAACAGA+AGG | + | chr4.1:15996792-15996811 | None:intergenic | 40.0% | |
| AGCAAGAACAGGAAAAATGC+TGG | - | chr4.1:15995774-15995793 | MS.gene34910:intron | 40.0% | |
| AGCTTGAAACTGACACTACA+TGG | - | chr4.1:15996023-15996042 | MS.gene34910:intron | 40.0% | |
| ATTGGACAGATCTACCCAAA+TGG | - | chr4.1:15997415-15997434 | MS.gene34910:intron | 40.0% | |
| CACACCATAAGACCAATCAA+GGG | + | chr4.1:15996749-15996768 | None:intergenic | 40.0% | |
| CAGATACTAGGGAAAGCTTT+GGG | - | chr4.1:15996538-15996557 | MS.gene34910:intron | 40.0% | |
| CATCGATATCTCAAAGAGAG+TGG | + | chr4.1:15997368-15997387 | None:intergenic | 40.0% | |
| CATTAAAGGACCAAAACCAC+GGG | + | chr4.1:15994297-15994316 | None:intergenic | 40.0% | |
| CGTTGAAGTTAGCAAGAAAG+TGG | - | chr4.1:15993933-15993952 | MS.gene34910:CDS | 40.0% | |
| CTATGCGGTACATCATACAA+AGG | + | chr4.1:15994605-15994624 | None:intergenic | 40.0% | |
| CTCTAATCTAGAAACCTGCT+AGG | + | chr4.1:15994923-15994942 | None:intergenic | 40.0% | |
| CTTGTCTGAGTCTTAGTCAA+TGG | - | chr4.1:15996295-15996314 | MS.gene34910:intron | 40.0% | |
| CTTTCAAATAACCATCTGGG+GGG | + | chr4.1:15995690-15995709 | None:intergenic | 40.0% | |
| CTTTCTTACCTTATGCACAG+TGG | + | chr4.1:15997647-15997666 | None:intergenic | 40.0% | |
| CTTTCTTGCTAACTTCAACG+CGG | + | chr4.1:15993933-15993952 | None:intergenic | 40.0% | |
| GACACTACATGGCAAGAAAT+AGG | - | chr4.1:15996034-15996053 | MS.gene34910:intron | 40.0% | |
| GCAATTTCACTAGTTCCCAT+AGG | + | chr4.1:15996968-15996987 | None:intergenic | 40.0% | |
| GCATTAAAGGACCAAAACCA+CGG | + | chr4.1:15994298-15994317 | None:intergenic | 40.0% | |
| GCTCTTATTGTCTCATGTTG+TGG | - | chr4.1:15994215-15994234 | MS.gene34910:intron | 40.0% | |
| GCTTTCAAATAACCATCTGG+GGG | + | chr4.1:15995691-15995710 | None:intergenic | 40.0% | |
| GTCAAATACTCAGCAAACAC+CGG | + | chr4.1:15993851-15993870 | None:intergenic | 40.0% | |
| GTCATTCCGGTCTAAATTGT+CGG | + | chr4.1:15993456-15993475 | None:intergenic | 40.0% | |
| GTTAGACAACGAGTTCTATG+CGG | + | chr4.1:15994620-15994639 | None:intergenic | 40.0% | |
| TAGAAACCTGCTAGGTTTCA+GGG | + | chr4.1:15994915-15994934 | None:intergenic | 40.0% | |
| TCACACCATAAGACCAATCA+AGG | + | chr4.1:15996750-15996769 | None:intergenic | 40.0% | |
| TCAGATACTAGGGAAAGCTT+TGG | - | chr4.1:15996537-15996556 | MS.gene34910:intron | 40.0% | |
| TGAGATCCAACAAGGTTCTA+AGG | - | chr4.1:15998101-15998120 | MS.gene34910:intron | 40.0% | |
| TGCATTTAACTAGGTACCAC+TGG | - | chr4.1:15996360-15996379 | MS.gene34910:intron | 40.0% | |
| TGCTTCAATGGTCGTACATT+GGG | - | chr4.1:15994239-15994258 | MS.gene34910:intron | 40.0% | |
| TGTATAAAACCTGGACAGCA+TGG | - | chr4.1:15996613-15996632 | MS.gene34910:intron | 40.0% | |
| TTAAGATGGCCTGGCATTAA+AGG | + | chr4.1:15994311-15994330 | None:intergenic | 40.0% | |
| TTCTTACCTTATGCACAGTG+GGG | + | chr4.1:15997645-15997664 | None:intergenic | 40.0% | |
| TTGGACAGATCTACCCAAAT+GGG | - | chr4.1:15997416-15997435 | MS.gene34910:intron | 40.0% | |
| TTTCACTAGTTCCCATAGGA+TGG | + | chr4.1:15996964-15996983 | None:intergenic | 40.0% | |
| TTTGTGAATCCTTGTGTCCA+TGG | - | chr4.1:15996883-15996902 | MS.gene34910:intron | 40.0% | |
| ! | AACATGTGTCAGTGTCATTC+CGG | + | chr4.1:15993469-15993488 | None:intergenic | 40.0% |
| ! | AATCACTCCATTGGGTTGTT+TGG | - | chr4.1:15993127-15993146 | MS.gene34910:intron | 40.0% |
| ! | CAAACATAAGTTGGATGGTC+AGG | + | chr4.1:15996391-15996410 | None:intergenic | 40.0% |
| ! | CATCCTTTTTGTCCTCTCAA+AGG | - | chr4.1:15997999-15998018 | MS.gene34910:intron | 40.0% |
| ! | CCGCATAGCTGCATTTATTT+TGG | - | chr4.1:15994493-15994512 | MS.gene34910:CDS | 40.0% |
| ! | CTTTAAAAGATCAGGCAGAC+AGG | - | chr4.1:15993786-15993805 | MS.gene34910:intron | 40.0% |
| ! | GCGCTCGAGAAAATTTTCAA+AGG | - | chr4.1:15994353-15994372 | MS.gene34910:intron | 40.0% |
| ! | TACAGAGGAACCAGAACTTT+TGG | - | chr4.1:15992889-15992908 | MS.gene34910:CDS | 40.0% |
| ! | TTAGTCTTTGCAAGAAGGAC+TGG | - | chr4.1:15995005-15995024 | MS.gene34910:intron | 40.0% |
| !! | AAAAATGCTGGCTTGTGAGT+GGG | - | chr4.1:15995786-15995805 | MS.gene34910:intron | 40.0% |
| !! | AAACCCCTTGATTGGTCTTA+TGG | - | chr4.1:15996742-15996761 | MS.gene34910:CDS | 40.0% |
| !! | CAAACTGGATTAGCAAGAAC+AGG | - | chr4.1:15995763-15995782 | MS.gene34910:intron | 40.0% |
| !! | GAGTATTTGACAGCCTTGTT+TGG | - | chr4.1:15993860-15993879 | MS.gene34910:intron | 40.0% |
| AACATCATCCTGTCGTCACA+CGG | - | chr4.1:15995898-15995917 | MS.gene34910:intron | 45.0% | |
| AATTTCCAGCACATCAGCGA+GGG | + | chr4.1:15998127-15998146 | None:intergenic | 45.0% | |
| AGAAACCTGCTAGGTTTCAG+GGG | + | chr4.1:15994914-15994933 | None:intergenic | 45.0% | |
| AGAAGTTCGTCCAGATGTAG+TGG | - | chr4.1:15995810-15995829 | MS.gene34910:intron | 45.0% | |
| CACAACGATCACATGCACTA+GGG | + | chr4.1:15998203-15998222 | None:intergenic | 45.0% | |
| CCATTTGCAAGTATGCAGCT+AGG | - | chr4.1:15996333-15996352 | MS.gene34910:intron | 45.0% | |
| CCTAGCTGCATACTTGCAAA+TGG | + | chr4.1:15996336-15996355 | None:intergenic | 45.0% | |
| CCTTCAGCACCAGTATTCAT+AGG | + | chr4.1:15993902-15993921 | None:intergenic | 45.0% | |
| CTAGAAACCTGCTAGGTTTC+AGG | + | chr4.1:15994916-15994935 | None:intergenic | 45.0% | |
| CTGCTTCAATGGTCGTACAT+TGG | - | chr4.1:15994238-15994257 | MS.gene34910:intron | 45.0% | |
| CTTCTGATTCCAACAGAAGG+TGG | + | chr4.1:15996789-15996808 | None:intergenic | 45.0% | |
| GAAAGTTTGTCCCCTGTATC+AGG | - | chr4.1:15997542-15997561 | MS.gene34910:intron | 45.0% | |
| GATCACTTCAAGTGAGGCAA+TGG | + | chr4.1:15997163-15997182 | None:intergenic | 45.0% | |
| GTCCCTCAGATGAATGAAGA+TGG | - | chr4.1:15993574-15993593 | MS.gene34910:CDS | 45.0% | |
| TAAAACCTGGACAGCATGGA+AGG | - | chr4.1:15996617-15996636 | MS.gene34910:intron | 45.0% | |
| TCATGTTGTGGCTGCTTCAA+TGG | - | chr4.1:15994227-15994246 | MS.gene34910:intron | 45.0% | |
| TCTTACCTTATGCACAGTGG+GGG | + | chr4.1:15997644-15997663 | None:intergenic | 45.0% | |
| TGAACACCAACCACTACATC+TGG | + | chr4.1:15995823-15995842 | None:intergenic | 45.0% | |
| TGGCTACTCTGCAGTTAATC+AGG | - | chr4.1:15993385-15993404 | MS.gene34910:intron | 45.0% | |
| TGTGACAGTCCATCTTTGAC+CGG | - | chr4.1:15995422-15995441 | MS.gene34910:intron | 45.0% | |
| TGTGGCAACACCAAAAGTTC+TGG | + | chr4.1:15992902-15992921 | None:intergenic | 45.0% | |
| TTAAACCTTCCATGCTGTCC+AGG | + | chr4.1:15996625-15996644 | None:intergenic | 45.0% | |
| TTTACTAACCGTGTGACGAC+AGG | + | chr4.1:15995909-15995928 | None:intergenic | 45.0% | |
| ! | AATGAAGCTACCCGTGGTTT+TGG | - | chr4.1:15994284-15994303 | MS.gene34910:intron | 45.0% |
| ! | CCTATGAATACTGGTGCTGA+AGG | - | chr4.1:15993899-15993918 | MS.gene34910:CDS | 45.0% |
| ! | CCTTTTTCTGCAGTTCAGCA+GGG | + | chr4.1:15994470-15994489 | None:intergenic | 45.0% |
| ! | GTACTTCAGGTTATGCGTCT+TGG | - | chr4.1:15997785-15997804 | MS.gene34910:intron | 45.0% |
| ! | TCCTTTTTCTGCAGTTCAGC+AGG | + | chr4.1:15994471-15994490 | None:intergenic | 45.0% |
| ! | TGCTGATGGAAACTTGTTCC+AGG | - | chr4.1:15994193-15994212 | MS.gene34910:intron | 45.0% |
| ! | TTGGGAAGATGAAGAAGCGT+TGG | + | chr4.1:15992929-15992948 | None:intergenic | 45.0% |
| !! | AAGAAGAGAGACTTGCTGAG+AGG | - | chr4.1:15997184-15997203 | MS.gene34910:CDS | 45.0% |
| !! | ATACTAGGGAAAGCTTTGGG+TGG | - | chr4.1:15996541-15996560 | MS.gene34910:intron | 45.0% |
| !! | GAAAAATGCTGGCTTGTGAG+TGG | - | chr4.1:15995785-15995804 | MS.gene34910:intron | 45.0% |
| !! | GGTTTTGGTCCTTTAATGCC+AGG | - | chr4.1:15994299-15994318 | MS.gene34910:intron | 45.0% |
| !! | GTAGCACCGACAATTTAGAC+CGG | - | chr4.1:15993447-15993466 | MS.gene34910:CDS | 45.0% |
| !! | TGGGAAGATGAAGAAGCGTT+GGG | + | chr4.1:15992928-15992947 | None:intergenic | 45.0% |
| AACCTATCCAAGGGGAAGCT+GGG | - | chr4.1:15994516-15994535 | MS.gene34910:CDS | 50.0% | |
| ACAATACCCGGACCATGTGA+AGG | - | chr4.1:15997475-15997494 | MS.gene34910:intron | 50.0% | |
| AGTGCGGATGAGATCCAACA+AGG | - | chr4.1:15998093-15998112 | MS.gene34910:intron | 50.0% | |
| ATGCAAAGGGATCAGCTGTG+TGG | - | chr4.1:15993327-15993346 | MS.gene34910:intron | 50.0% | |
| CAAATGGGAGGTGAGCTTCT+CGG | - | chr4.1:15997431-15997450 | MS.gene34910:intron | 50.0% | |
| CAATTTCCAGCACATCAGCG+AGG | + | chr4.1:15998128-15998147 | None:intergenic | 50.0% | |
| CCAATCAAGGGGTTTAAGGG+CGG | + | chr4.1:15996737-15996756 | None:intergenic | 50.0% | |
| CCACAACGATCACATGCACT+AGG | + | chr4.1:15998204-15998223 | None:intergenic | 50.0% | |
| CCCTGCTGAACTGCAGAAAA+AGG | - | chr4.1:15994467-15994486 | MS.gene34910:CDS | 50.0% | |
| CCTAGTGCATGTGATCGTTG+TGG | - | chr4.1:15998201-15998220 | MS.gene34910:CDS | 50.0% | |
| CGATACAGACATGCTGACAC+CGG | + | chr4.1:15993522-15993541 | None:intergenic | 50.0% | |
| GAAACCTGCTAGGTTTCAGG+GGG | + | chr4.1:15994913-15994932 | None:intergenic | 50.0% | |
| GAACGAAAGCCGGTCAAAGA+TGG | + | chr4.1:15995434-15995453 | None:intergenic | 50.0% | |
| GACAGATCTACCCAAATGGG+AGG | - | chr4.1:15997419-15997438 | MS.gene34910:intron | 50.0% | |
| GAGAAGCTCACCTCCCATTT+GGG | + | chr4.1:15997432-15997451 | None:intergenic | 50.0% | |
| GTTCGTCCAGATGTAGTGGT+TGG | - | chr4.1:15995814-15995833 | MS.gene34910:intron | 50.0% | |
| TCAAGACATGCAAACGGCCA+TGG | + | chr4.1:15996903-15996922 | None:intergenic | 50.0% | |
| TCTGCAAGAACTGCGCTAAC+TGG | + | chr4.1:15996577-15996596 | None:intergenic | 50.0% | |
| TGCAAAGGGATCAGCTGTGT+GGG | - | chr4.1:15993328-15993347 | MS.gene34910:intron | 50.0% | |
| TGTGACAATGAAGCTACCCG+TGG | - | chr4.1:15994278-15994297 | MS.gene34910:intron | 50.0% | |
| ! | CGGTGTCAGCATGTCTGTAT+CGG | - | chr4.1:15993520-15993539 | MS.gene34910:CDS | 50.0% |
| ! | GAATACTGGTGCTGAAGGTG+TGG | - | chr4.1:15993904-15993923 | MS.gene34910:CDS | 50.0% |
| !! | GTCGGTGCTACATAAAGCCT+TGG | + | chr4.1:15993438-15993457 | None:intergenic | 50.0% |
| !! | TGAAGAAGCGTTGGGTTGTG+TGG | + | chr4.1:15992920-15992939 | None:intergenic | 50.0% |
| AAAGATGCTGCTCCTCCAGC+TGG | - | chr4.1:15998177-15998196 | MS.gene34910:CDS | 55.0% | |
| AACATACCCCAGCTTCCCCT+TGG | + | chr4.1:15994526-15994545 | None:intergenic | 55.0% | |
| ACCTATCCAAGGGGAAGCTG+GGG | - | chr4.1:15994517-15994536 | MS.gene34910:CDS | 55.0% | |
| AGATCAGGCAGACAGGCTGA+CGG | - | chr4.1:15993793-15993812 | MS.gene34910:intron | 55.0% | |
| ATACCCGGACCATGTGAAGG+AGG | - | chr4.1:15997478-15997497 | MS.gene34910:intron | 55.0% | |
| ATCAGCTGTGTGGGATCCAG+AGG | - | chr4.1:15993337-15993356 | MS.gene34910:intron | 55.0% | |
| CAGGTGAAAATCCCCCCAGA+TGG | - | chr4.1:15995676-15995695 | MS.gene34910:intron | 55.0% | |
| CCGCCCTTAAACCCCTTGAT+TGG | - | chr4.1:15996734-15996753 | MS.gene34910:CDS | 55.0% | |
| CGAGAAGCTCACCTCCCATT+TGG | + | chr4.1:15997433-15997452 | None:intergenic | 55.0% | |
| CGAGGGCCTTAGAACCTTGT+TGG | + | chr4.1:15998110-15998129 | None:intergenic | 55.0% | |
| CGGGGAAGAGGACTGTTCAT+TGG | - | chr4.1:15997503-15997522 | MS.gene34910:intron | 55.0% | |
| CGTTGTGGTCGAGTCGTGTA+TGG | - | chr4.1:15998216-15998235 | MS.gene34910:CDS | 55.0% | |
| GAACCTATCCAAGGGGAAGC+TGG | - | chr4.1:15994515-15994534 | MS.gene34910:CDS | 55.0% | |
| GGATGGTCAGGTCTATCCAG+TGG | + | chr4.1:15996379-15996398 | None:intergenic | 55.0% | |
| TCACTCCCCCACTGTGCATA+AGG | - | chr4.1:15997636-15997655 | MS.gene34910:intron | 55.0% | |
| TCAGCTGTGTGGGATCCAGA+GGG | - | chr4.1:15993338-15993357 | MS.gene34910:intron | 55.0% | |
| TGAGGCAATGGCAACTGCAC+TGG | + | chr4.1:15997151-15997170 | None:intergenic | 55.0% | |
| TGCAAACGGCCATGGACACA+AGG | + | chr4.1:15996895-15996914 | None:intergenic | 55.0% | |
| TGGATCTCATCCGCACTGCA+AGG | + | chr4.1:15998090-15998109 | None:intergenic | 55.0% | |
| TTCTCCCCCTGAAACCTAGC+AGG | - | chr4.1:15994906-15994925 | MS.gene34910:intron | 55.0% | |
| ! | ATGGCAACTGCACTGGCCAA+TGG | + | chr4.1:15997144-15997163 | None:intergenic | 55.0% |
| ! | GCTGGAGGAGCAGCATCTTT+TGG | + | chr4.1:15998177-15998196 | None:intergenic | 55.0% |
| ! | GTCTGTATCGGTGCTTCGTC+AGG | - | chr4.1:15993532-15993551 | MS.gene34910:CDS | 55.0% |
| !! | CTAGGGAAAGCTTTGGGTGG+AGG | - | chr4.1:15996544-15996563 | MS.gene34910:intron | 55.0% |
| ACCCCAGCTTCCCCTTGGAT+AGG | + | chr4.1:15994521-15994540 | None:intergenic | 60.0% | |
| CGCACCTCCTTCACATGGTC+CGG | + | chr4.1:15997485-15997504 | None:intergenic | 60.0% | |
| CGGACCATGTGAAGGAGGTG+CGG | - | chr4.1:15997483-15997502 | MS.gene34910:intron | 60.0% | |
| GCACCTCCTTCACATGGTCC+GGG | + | chr4.1:15997484-15997503 | None:intergenic | 60.0% | |
| TAAGGCCCTCGCTGATGTGC+TGG | - | chr4.1:15998119-15998138 | MS.gene34910:CDS | 60.0% | |
| TCACATGCACTAGGGCCAGC+TGG | + | chr4.1:15998195-15998214 | None:intergenic | 60.0% | |
| TTCCCCGCACCTCCTTCACA+TGG | + | chr4.1:15997490-15997509 | None:intergenic | 60.0% | |
| ! | GACCATGTGAAGGAGGTGCG+GGG | - | chr4.1:15997485-15997504 | MS.gene34910:intron | 60.0% |
| ! | GGACCATGTGAAGGAGGTGC+GGG | - | chr4.1:15997484-15997503 | MS.gene34910:intron | 60.0% |
| CATGCACTAGGGCCAGCTGG+AGG | + | chr4.1:15998192-15998211 | None:intergenic | 65.0% | |
| ! | GTGAAGGAGGTGCGGGGAAG+AGG | - | chr4.1:15997491-15997510 | MS.gene34910:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 15992847 | 15998242 | 15992847 | ID=MS.gene34910 |
| chr4.1 | mRNA | 15992847 | 15998242 | 15992847 | ID=MS.gene34910.t1;Parent=MS.gene34910 |
| chr4.1 | exon | 15998103 | 15998242 | 15998103 | ID=MS.gene34910.t1.exon1;Parent=MS.gene34910.t1 |
| chr4.1 | CDS | 15998103 | 15998242 | 15998103 | ID=cds.MS.gene34910.t1;Parent=MS.gene34910.t1 |
| chr4.1 | exon | 15997683 | 15997791 | 15997683 | ID=MS.gene34910.t1.exon2;Parent=MS.gene34910.t1 |
| chr4.1 | CDS | 15997683 | 15997791 | 15997683 | ID=cds.MS.gene34910.t1;Parent=MS.gene34910.t1 |
| chr4.1 | exon | 15997101 | 15997331 | 15997101 | ID=MS.gene34910.t1.exon3;Parent=MS.gene34910.t1 |
| chr4.1 | CDS | 15997101 | 15997331 | 15997101 | ID=cds.MS.gene34910.t1;Parent=MS.gene34910.t1 |
| chr4.1 | exon | 15996715 | 15996874 | 15996715 | ID=MS.gene34910.t1.exon4;Parent=MS.gene34910.t1 |
| chr4.1 | CDS | 15996715 | 15996874 | 15996715 | ID=cds.MS.gene34910.t1;Parent=MS.gene34910.t1 |
| chr4.1 | exon | 15996551 | 15996606 | 15996551 | ID=MS.gene34910.t1.exon5;Parent=MS.gene34910.t1 |
| chr4.1 | CDS | 15996551 | 15996606 | 15996551 | ID=cds.MS.gene34910.t1;Parent=MS.gene34910.t1 |
| chr4.1 | exon | 15995258 | 15995410 | 15995258 | ID=MS.gene34910.t1.exon6;Parent=MS.gene34910.t1 |
| chr4.1 | CDS | 15995258 | 15995410 | 15995258 | ID=cds.MS.gene34910.t1;Parent=MS.gene34910.t1 |
| chr4.1 | exon | 15994451 | 15994548 | 15994451 | ID=MS.gene34910.t1.exon7;Parent=MS.gene34910.t1 |
| chr4.1 | CDS | 15994451 | 15994548 | 15994451 | ID=cds.MS.gene34910.t1;Parent=MS.gene34910.t1 |
| chr4.1 | exon | 15993884 | 15993964 | 15993884 | ID=MS.gene34910.t1.exon8;Parent=MS.gene34910.t1 |
| chr4.1 | CDS | 15993884 | 15993964 | 15993884 | ID=cds.MS.gene34910.t1;Parent=MS.gene34910.t1 |
| chr4.1 | exon | 15993432 | 15993665 | 15993432 | ID=MS.gene34910.t1.exon9;Parent=MS.gene34910.t1 |
| chr4.1 | CDS | 15993432 | 15993665 | 15993432 | ID=cds.MS.gene34910.t1;Parent=MS.gene34910.t1 |
| chr4.1 | exon | 15992847 | 15992994 | 15992847 | ID=MS.gene34910.t1.exon10;Parent=MS.gene34910.t1 |
| chr4.1 | CDS | 15992847 | 15992994 | 15992847 | ID=cds.MS.gene34910.t1;Parent=MS.gene34910.t1 |
| Gene Sequence |
| Protein sequence |
