AlfalfaGEDB | MS.gene35486

M. sativa cultivar XinJiangDaYe / MS.gene35486

KEGG: -
GO: GO:0003674 GO:0003824 GO:0004497 GO:0005488 GO:0005506 GO:0008150 GO:0008152 GO:0016491 GO:0016705 GO:0020037 GO:0043167 GO:0043169 GO:0046872 GO:0046906 GO:0046914 GO:0048037 GO:0055114 GO:0097159 GO:1901363
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene35486.t1	CAB54849.1	100	279	0	0	1	279	202	480	1.20E-156	562.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene35486.t1	K4CF70	60.8	283	106	3	1	278	193	475	2.2e-98	360.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene35486.t1	Q9STA1	100.0	279	0	0	1	279	202	480	8.6e-157	562.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050593	MS.gene35486	0.816464	5.46E-52	-1.69E-46
MS.gene050772	MS.gene35486	0.808987	2.36E-50	-1.69E-46
MS.gene051387	MS.gene35486	0.800671	1.29E-48	-1.69E-46
MS.gene051858	MS.gene35486	0.813637	2.31E-51	-1.69E-46
MS.gene052346	MS.gene35486	0.803244	3.82E-49	-1.69E-46
MS.gene052870	MS.gene35486	0.813543	2.43E-51	-1.69E-46
MS.gene052872	MS.gene35486	0.809861	1.53E-50	-1.69E-46
MS.gene053479	MS.gene35486	0.838778	2.35E-57	-1.69E-46
MS.gene053824	MS.gene35486	0.812264	4.63E-51	-1.69E-46
MS.gene05494	MS.gene35486	0.811438	7.00E-51	-1.69E-46
MS.gene055577	MS.gene35486	0.800956	1.13E-48	-1.69E-46
MS.gene056877	MS.gene35486	0.810957	8.90E-51	-1.69E-46
MS.gene057331	MS.gene35486	0.831754	1.40E-55	-1.69E-46
MS.gene058323	MS.gene35486	0.806871	6.67E-50	-1.69E-46
MS.gene05837	MS.gene35486	0.820339	7.23E-53	-1.69E-46
MS.gene058700	MS.gene35486	0.812448	4.22E-51	-1.69E-46
MS.gene059023	MS.gene35486	0.805978	1.03E-49	-1.69E-46
MS.gene059902	MS.gene35486	0.811231	7.77E-51	-1.69E-46
MS.gene06092	MS.gene35486	0.811436	7.01E-51	-1.69E-46
MS.gene061154	MS.gene35486	0.805959	1.04E-49	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 81 sgRNAs with CRISPR-Local

Find 98 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTACCTGCACACTGTTTAT+TGG	0.128108	2.4:+13465356	None:intergenic
GCTATGCTCTCAATCAATTT+TGG	0.168873	2.4:+13465756	None:intergenic
CGTAGGTATGATTTAATTAA+AGG	0.209897	2.4:-13465288	MS.gene35486:CDS
GGAGCCTGATTCGGCGATTT+TGG	0.224744	2.4:+13466246	None:intergenic
AACTATTTGTATTGGTCTAA+TGG	0.258554	2.4:-13465405	MS.gene35486:CDS
CCACCGGTTCCACTTCAATT+TGG	0.305118	2.4:-13465600	MS.gene35486:CDS
CCCTGTCGTGTTTGATGAAC+CGG	0.324817	2.4:-13465478	MS.gene35486:CDS
ACTATTTGTATTGGTCTAAT+GGG	0.337855	2.4:-13465404	MS.gene35486:CDS
ACCAACCCTAACTCTTCATT+TGG	0.361089	2.4:+13465233	None:intergenic
TTCTCTTTAGTGAACCGTTC+CGG	0.366646	2.4:+13465444	None:intergenic
GTGTTGGGTTTCAACTCATA+TGG	0.377271	2.4:-13465798	MS.gene35486:CDS
GATCCCAAAATCGCCGAATC+AGG	0.380571	2.4:-13466250	MS.gene35486:CDS
GAGAAAGGCGGTTCAACTCT+TGG	0.381113	2.4:-13465687	MS.gene35486:CDS
GTAGGTATGATTTAATTAAA+GGG	0.394386	2.4:-13465287	MS.gene35486:CDS
GAACCGGTGGGTTCATTCGC+AGG	0.400858	2.4:+13465613	None:intergenic
TCTTCATTTGGCCTTCCTTA+AGG	0.406928	2.4:+13465245	None:intergenic
AGTTGTTGAACTATTTGTAT+TGG	0.420022	2.4:-13465413	MS.gene35486:CDS
CGTTCCGGTTTAAATTGTTC+CGG	0.425552	2.4:+13465459	None:intergenic
AGAGTTGGAACTAATAAATT+CGG	0.427670	2.4:-13465649	MS.gene35486:CDS
AGAAAGGCGGTTCAACTCTT+GGG	0.427891	2.4:-13465686	MS.gene35486:CDS
GGCCTTCCTTAAGGCAGTAA+TGG	0.437730	2.4:+13465254	None:intergenic
ATTGGACACAGTTGGCGAAC+CGG	0.451019	2.4:+13465374	None:intergenic
TCTCAACTTCTCTTGCAAAC+CGG	0.454849	2.4:+13465722	None:intergenic
CATAAGGGTAAGAGAAGGAA+TGG	0.459434	2.4:+13466140	None:intergenic
AGCATAGCGAACGGTCCAAC+CGG	0.462229	2.4:-13465741	MS.gene35486:CDS
GTAGTTCCATTACTGCCTTA+AGG	0.466728	2.4:-13465260	MS.gene35486:CDS
CAATAAACAGTGTGCAGGTA+AGG	0.471780	2.4:-13465355	MS.gene35486:CDS
GGAAGATTTCTTCGAGTGGT+TGG	0.477327	2.4:+13466164	None:intergenic
TACCCTTATGCTCTTGTCAG+TGG	0.477774	2.4:-13466127	MS.gene35486:CDS
CGACCAAATTGAAGTGGAAC+CGG	0.478711	2.4:+13465597	None:intergenic
TGGTCTAATGGGCCACAAAC+CGG	0.479536	2.4:-13465393	MS.gene35486:CDS
GTTTGACTCGTTAAAAGAGT+TGG	0.480961	2.4:-13465664	MS.gene35486:CDS
TCTCCACTGACAAGAGCATA+AGG	0.482167	2.4:+13466124	None:intergenic
TGAACCGGAACAATTTAAAC+CGG	0.486382	2.4:-13465463	MS.gene35486:CDS
CTTCGCGTTCAATGTGAAGA+AGG	0.486960	2.4:-13465541	MS.gene35486:CDS
GAGCATGGAGGAGCCTGATT+CGG	0.489708	2.4:+13466237	None:intergenic
AGAAAGGAAGCAAGAGAGAA+AGG	0.493653	2.4:-13465702	MS.gene35486:CDS
GCTCCTCCATGCTCAACAAA+TGG	0.496661	2.4:-13466228	MS.gene35486:CDS
CACTGTTTATTGGACACAGT+TGG	0.496951	2.4:+13465366	None:intergenic
TGCGAGCCATTTGTTGAGCA+TGG	0.501636	2.4:+13466222	None:intergenic
TCCGGTTCATCAAACACGAC+AGG	0.504479	2.4:+13465477	None:intergenic
TGGGTTTCAACTCATATGGT+GGG	0.510542	2.4:-13465794	MS.gene35486:CDS
GATTTCTTCGAGTGGTTGGA+TGG	0.511395	2.4:+13466168	None:intergenic
CTGGCTCGACCAAATTGAAG+TGG	0.519831	2.4:+13465591	None:intergenic
AGAAGGGTGAGTTATTATGT+GGG	0.524535	2.4:-13465524	MS.gene35486:CDS
AACTTCTCTTGCAAACCGGT+TGG	0.526019	2.4:+13465726	None:intergenic
TTGGGTTTCAACTCATATGG+TGG	0.534485	2.4:-13465795	MS.gene35486:CDS
TTTGCAAGAGAAGTTGAGAA+AGG	0.535515	2.4:-13465718	MS.gene35486:CDS
TATGATTTAATTAAAGGGGA+TGG	0.541669	2.4:-13465282	MS.gene35486:CDS
TAGGTATGATTTAATTAAAG+GGG	0.542276	2.4:-13465286	MS.gene35486:CDS
AAGGGTAAGAGAAGGAATGG+AGG	0.542938	2.4:+13466143	None:intergenic
CACAATCAACGCAGCGGTGA+AGG	0.542968	2.4:+13465323	None:intergenic
ACAGTTGGCGAACCGGTTTG+TGG	0.545395	2.4:+13465381	None:intergenic
AAGAAGGGTGAGTTATTATG+TGG	0.548271	2.4:-13465525	MS.gene35486:CDS
GTTGTTTAATGAAGTTGTAG+AGG	0.549200	2.4:+13466092	None:intergenic
CTTCACCGCTGCGTTGATTG+TGG	0.549965	2.4:-13465322	MS.gene35486:CDS
TTTGGGATCAAGGGAAGGAT+CGG	0.552953	2.4:+13466264	None:intergenic
GGTTTCAGAAGCTTGTAATG+AGG	0.560783	2.4:-13465503	MS.gene35486:CDS
CTCCACTGACAAGAGCATAA+GGG	0.568207	2.4:+13466125	None:intergenic
AACCGGTGGGTTCATTCGCA+GGG	0.568675	2.4:+13465614	None:intergenic
TTCCATTACTGCCTTAAGGA+AGG	0.569655	2.4:-13465256	MS.gene35486:CDS
GTTGGAACTAATAAATTCGG+TGG	0.571940	2.4:-13465646	MS.gene35486:CDS
GAACGGTTCACTAAAGAGAA+AGG	0.572715	2.4:-13465441	MS.gene35486:CDS
GTGTCCAATAAACAGTGTGC+AGG	0.576661	2.4:-13465360	MS.gene35486:CDS
TGGAGGAAGATTTCTTCGAG+TGG	0.578582	2.4:+13466160	None:intergenic
AAGAGCATAAGGGTAAGAGA+AGG	0.584245	2.4:+13466135	None:intergenic
GTTTCAGAAGCTTGTAATGA+GGG	0.587067	2.4:-13465502	MS.gene35486:CDS
CCAAATTGAAGTGGAACCGG+TGG	0.613875	2.4:+13465600	None:intergenic
TTCGCGTTCAATGTGAAGAA+GGG	0.615898	2.4:-13465540	MS.gene35486:CDS
CGGAACAATTTAAACCGGAA+CGG	0.628988	2.4:-13465458	MS.gene35486:CDS
CCGGTTCATCAAACACGACA+GGG	0.637179	2.4:+13465478	None:intergenic
TTGTGGCACACTTGTTACGT+AGG	0.642675	2.4:-13465305	MS.gene35486:CDS
AACCCTGCGAATGAACCCAC+CGG	0.654342	2.4:-13465616	MS.gene35486:CDS
TACAACTTCATTAAACAACA+TGG	0.659594	2.4:-13466088	MS.gene35486:intron
CAAATTGAAGTGGAACCGGT+GGG	0.672914	2.4:+13465601	None:intergenic
TTGATTGAGAGCATAGCGAA+CGG	0.698174	2.4:-13465750	MS.gene35486:CDS
ATGGTGCCAACACTCACAGT+CGG	0.699929	2.4:+13466187	None:intergenic
AAGGAAGCAAGAGAGAAAGG+CGG	0.704473	2.4:-13465699	MS.gene35486:CDS
ATACAAATAGTTCAACAACT+CGG	0.705467	2.4:+13465416	None:intergenic
GAGCCATTTGTTGAGCATGG+AGG	0.708844	2.4:+13466225	None:intergenic
GTGTGCCACAATCAACGCAG+CGG	0.735438	2.4:+13465317	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TAATAAACAATATTGATAAC+AGG	-	chr2.4:13465621-13465640	MS.gene35486:CDS	15.0%
!!	GTAGGTATGATTTAATTAAA+GGG	-	chr2.4:13466225-13466244	MS.gene35486:CDS	20.0%
!!	TAGGTATGATTTAATTAAAG+GGG	-	chr2.4:13466226-13466245	MS.gene35486:CDS	20.0%
!	AGAGTTGGAACTAATAAATT+CGG	-	chr2.4:13465863-13465882	MS.gene35486:CDS	25.0%
!	AGTTGTTGAACTATTTGTAT+TGG	-	chr2.4:13466099-13466118	MS.gene35486:CDS	25.0%
!	ATACAAATAGTTCAACAACT+CGG	+	chr2.4:13466099-13466118	None:intergenic	25.0%
!	CGTAGGTATGATTTAATTAA+AGG	-	chr2.4:13466224-13466243	MS.gene35486:CDS	25.0%
!	TACAACTTCATTAAACAACA+TGG	-	chr2.4:13465424-13465443	MS.gene35486:CDS	25.0%
!	TATGATTTAATTAAAGGGGA+TGG	-	chr2.4:13466230-13466249	MS.gene35486:CDS	25.0%
!!	AACAATATTGATAACAGGTA+AGG	-	chr2.4:13465626-13465645	MS.gene35486:CDS	25.0%
!!	AACTATTTGTATTGGTCTAA+TGG	-	chr2.4:13466107-13466126	MS.gene35486:CDS	25.0%
!!	ACTATTTGTATTGGTCTAAT+GGG	-	chr2.4:13466108-13466127	MS.gene35486:CDS	25.0%
!!	TTTTCACATCATTATTTGCT+GGG	+	chr2.4:13465571-13465590	None:intergenic	25.0%
!!	TTTTTCACATCATTATTTGC+TGG	+	chr2.4:13465572-13465591	None:intergenic	25.0%
	GTTGTTTAATGAAGTTGTAG+AGG	+	chr2.4:13465423-13465442	None:intergenic	30.0%
!	TTTCACATCATTATTTGCTG+GGG	+	chr2.4:13465570-13465589	None:intergenic	30.0%
!!	ACTGAGTTGAAAATCTTTTC+TGG	+	chr2.4:13465943-13465962	None:intergenic	30.0%
	AAGAAGGGTGAGTTATTATG+TGG	-	chr2.4:13465987-13466006	MS.gene35486:intron	35.0%
	AGAAGGGTGAGTTATTATGT+GGG	-	chr2.4:13465988-13466007	MS.gene35486:intron	35.0%
	ATAAAAAGTGGAACGGAGTT+CGG	-	chr2.4:13465654-13465673	MS.gene35486:CDS	35.0%
	GGAAGTGATAAAAAGTGGAA+CGG	-	chr2.4:13465647-13465666	MS.gene35486:CDS	35.0%
	GGTAAGGAAGTGATAAAAAG+TGG	-	chr2.4:13465642-13465661	MS.gene35486:CDS	35.0%
	GTTGGAACTAATAAATTCGG+TGG	-	chr2.4:13465866-13465885	MS.gene35486:CDS	35.0%
	GTTTCAGAAGCTTGTAATGA+GGG	-	chr2.4:13466010-13466029	MS.gene35486:intron	35.0%
	TGAACCGGAACAATTTAAAC+CGG	-	chr2.4:13466049-13466068	MS.gene35486:intron	35.0%
	TTTGCAAGAGAAGTTGAGAA+AGG	-	chr2.4:13465794-13465813	MS.gene35486:CDS	35.0%
!	GCTATGCTCTCAATCAATTT+TGG	+	chr2.4:13465759-13465778	None:intergenic	35.0%
!	GTTTGACTCGTTAAAAGAGT+TGG	-	chr2.4:13465848-13465867	MS.gene35486:CDS	35.0%
!	TGCTCTCAATCAATTTTGGA+AGG	+	chr2.4:13465755-13465774	None:intergenic	35.0%
!!!	CACAACTTGCTTTTTGTGTT+GGG	-	chr2.4:13465699-13465718	MS.gene35486:CDS	35.0%
	AGAAAGGAAGCAAGAGAGAA+AGG	-	chr2.4:13465810-13465829	MS.gene35486:CDS	40.0%
	CAATAAACAGTGTGCAGGTA+AGG	-	chr2.4:13466157-13466176	MS.gene35486:CDS	40.0%
	CACTGTTTATTGGACACAGT+TGG	+	chr2.4:13466149-13466168	None:intergenic	40.0%
	CATAAGGGTAAGAGAAGGAA+TGG	+	chr2.4:13465375-13465394	None:intergenic	40.0%
	CCAACACAAAAAGCAAGTTG+TGG	+	chr2.4:13465701-13465720	None:intergenic	40.0%
	CGGAACAATTTAAACCGGAA+CGG	-	chr2.4:13466054-13466073	MS.gene35486:intron	40.0%
	CGTTCCGGTTTAAATTGTTC+CGG	+	chr2.4:13466056-13466075	None:intergenic	40.0%
	CTTACCTGCACACTGTTTAT+TGG	+	chr2.4:13466159-13466178	None:intergenic	40.0%
	GAACGGTTCACTAAAGAGAA+AGG	-	chr2.4:13466071-13466090	MS.gene35486:intron	40.0%
	GGTTTCAGAAGCTTGTAATG+AGG	-	chr2.4:13466009-13466028	MS.gene35486:intron	40.0%
	GTAGTTCCATTACTGCCTTA+AGG	-	chr2.4:13466252-13466271	MS.gene35486:CDS	40.0%
	GTGTTGGGTTTCAACTCATA+TGG	-	chr2.4:13465714-13465733	MS.gene35486:CDS	40.0%
	TAAAAAGTGGAACGGAGTTC+GGG	-	chr2.4:13465655-13465674	MS.gene35486:CDS	40.0%
	TCTCAACTTCTCTTGCAAAC+CGG	+	chr2.4:13465793-13465812	None:intergenic	40.0%
	TGGGTTTCAACTCATATGGT+GGG	-	chr2.4:13465718-13465737	MS.gene35486:CDS	40.0%
	TTCCATTACTGCCTTAAGGA+AGG	-	chr2.4:13466256-13466275	MS.gene35486:CDS	40.0%
	TTCGCGTTCAATGTGAAGAA+GGG	-	chr2.4:13465972-13465991	MS.gene35486:intron	40.0%
	TTCTCTTTAGTGAACCGTTC+CGG	+	chr2.4:13466071-13466090	None:intergenic	40.0%
	TTGGGTTTCAACTCATATGG+TGG	-	chr2.4:13465717-13465736	MS.gene35486:CDS	40.0%
!	AAGAGCATAAGGGTAAGAGA+AGG	+	chr2.4:13465380-13465399	None:intergenic	40.0%
!	TTGATTGAGAGCATAGCGAA+CGG	-	chr2.4:13465762-13465781	MS.gene35486:CDS	40.0%
!!!	CCACAACTTGCTTTTTGTGT+TGG	-	chr2.4:13465698-13465717	MS.gene35486:CDS	40.0%
	AACTTCTCTTGCAAACCGGT+TGG	+	chr2.4:13465789-13465808	None:intergenic	45.0%
	AAGGAAGCAAGAGAGAAAGG+CGG	-	chr2.4:13465813-13465832	MS.gene35486:CDS	45.0%
	AAGGGTAAGAGAAGGAATGG+AGG	+	chr2.4:13465372-13465391	None:intergenic	45.0%
	AGAAAGGCGGTTCAACTCTT+GGG	-	chr2.4:13465826-13465845	MS.gene35486:CDS	45.0%
	CAAATTGAAGTGGAACCGGT+GGG	+	chr2.4:13465914-13465933	None:intergenic	45.0%
	CGACCAAATTGAAGTGGAAC+CGG	+	chr2.4:13465918-13465937	None:intergenic	45.0%
	CTTCGCGTTCAATGTGAAGA+AGG	-	chr2.4:13465971-13465990	MS.gene35486:intron	45.0%
	GATTTCTTCGAGTGGTTGGA+TGG	+	chr2.4:13465347-13465366	None:intergenic	45.0%
	GGAAGATTTCTTCGAGTGGT+TGG	+	chr2.4:13465351-13465370	None:intergenic	45.0%
	GTGTCCAATAAACAGTGTGC+AGG	-	chr2.4:13466152-13466171	MS.gene35486:CDS	45.0%
	TACCCTTATGCTCTTGTCAG+TGG	-	chr2.4:13465385-13465404	MS.gene35486:CDS	45.0%
	TGGAGGAAGATTTCTTCGAG+TGG	+	chr2.4:13465355-13465374	None:intergenic	45.0%
!	CTCCACTGACAAGAGCATAA+GGG	+	chr2.4:13465390-13465409	None:intergenic	45.0%
!	TCTCCACTGACAAGAGCATA+AGG	+	chr2.4:13465391-13465410	None:intergenic	45.0%
!	TTGTGGCACACTTGTTACGT+AGG	-	chr2.4:13466207-13466226	MS.gene35486:CDS	45.0%
!	TTTGGGATCAAGGGAAGGAT+CGG	+	chr2.4:13465251-13465270	None:intergenic	45.0%
!!	CTTTTACCGACTGTGAGTGT+TGG	-	chr2.4:13465319-13465338	MS.gene35486:CDS	45.0%
!!!	ATTCGGCGATTTTGGGATCA+AGG	+	chr2.4:13465261-13465280	None:intergenic	45.0%
!!!	TTCGGCGATTTTGGGATCAA+GGG	+	chr2.4:13465260-13465279	None:intergenic	45.0%
	ATTGGACACAGTTGGCGAAC+CGG	+	chr2.4:13466141-13466160	None:intergenic	50.0%
	CCAAATTGAAGTGGAACCGG+TGG	+	chr2.4:13465915-13465934	None:intergenic	50.0%
	CCCTGTCGTGTTTGATGAAC+CGG	-	chr2.4:13466034-13466053	MS.gene35486:intron	50.0%
	CCGGTTCATCAAACACGACA+GGG	+	chr2.4:13466037-13466056	None:intergenic	50.0%
	GAGAAAGGCGGTTCAACTCT+TGG	-	chr2.4:13465825-13465844	MS.gene35486:CDS	50.0%
	GATCCCAAAATCGCCGAATC+AGG	-	chr2.4:13465262-13465281	MS.gene35486:CDS	50.0%
	GCTCCTCCATGCTCAACAAA+TGG	-	chr2.4:13465284-13465303	MS.gene35486:CDS	50.0%
	GGCCTTCCTTAAGGCAGTAA+TGG	+	chr2.4:13466261-13466280	None:intergenic	50.0%
	TCCGGTTCATCAAACACGAC+AGG	+	chr2.4:13466038-13466057	None:intergenic	50.0%
!	ATGGTGCCAACACTCACAGT+CGG	+	chr2.4:13465328-13465347	None:intergenic	50.0%
!	CTGGCTCGACCAAATTGAAG+TGG	+	chr2.4:13465924-13465943	None:intergenic	50.0%
!	GAGCCATTTGTTGAGCATGG+AGG	+	chr2.4:13465290-13465309	None:intergenic	50.0%
!	TGCGAGCCATTTGTTGAGCA+TGG	+	chr2.4:13465293-13465312	None:intergenic	50.0%
!	TGGTCTAATGGGCCACAAAC+CGG	-	chr2.4:13466119-13466138	MS.gene35486:CDS	50.0%
!!	CCACCGGTTCCACTTCAATT+TGG	-	chr2.4:13465912-13465931	MS.gene35486:intron	50.0%
!!!	GAGCCTGATTCGGCGATTTT+GGG	+	chr2.4:13465268-13465287	None:intergenic	50.0%
!!!	GCGATTTTGGGATCAAGGGA+AGG	+	chr2.4:13465256-13465275	None:intergenic	50.0%
	AACCCTGCGAATGAACCCAC+CGG	-	chr2.4:13465896-13465915	MS.gene35486:intron	55.0%
	AGCATAGCGAACGGTCCAAC+CGG	-	chr2.4:13465771-13465790	MS.gene35486:CDS	55.0%
	CACAATCAACGCAGCGGTGA+AGG	+	chr2.4:13466192-13466211	None:intergenic	55.0%
	GAGCATGGAGGAGCCTGATT+CGG	+	chr2.4:13465278-13465297	None:intergenic	55.0%
	GTGTGCCACAATCAACGCAG+CGG	+	chr2.4:13466198-13466217	None:intergenic	55.0%
!	AACCGGTGGGTTCATTCGCA+GGG	+	chr2.4:13465901-13465920	None:intergenic	55.0%
!!	ACAGTTGGCGAACCGGTTTG+TGG	+	chr2.4:13466134-13466153	None:intergenic	55.0%
!!	CTTCACCGCTGCGTTGATTG+TGG	-	chr2.4:13466190-13466209	MS.gene35486:CDS	55.0%
!!!	GGAGCCTGATTCGGCGATTT+TGG	+	chr2.4:13465269-13465288	None:intergenic	55.0%
!	GAACCGGTGGGTTCATTCGC+AGG	+	chr2.4:13465902-13465921	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.4	gene	13465248	13466286	13465248	ID=MS.gene35486
chr2.4	mRNA	13465248	13466286	13465248	ID=MS.gene35486.t1;Parent=MS.gene35486
chr2.4	exon	13466089	13466286	13466089	ID=MS.gene35486.t1.exon1;Parent=MS.gene35486.t1
chr2.4	CDS	13466089	13466286	13466089	ID=cds.MS.gene35486.t1;Parent=MS.gene35486.t1
chr2.4	exon	13465248	13465891	13465248	ID=MS.gene35486.t1.exon2;Parent=MS.gene35486.t1
chr2.4	CDS	13465248	13465891	13465248	ID=cds.MS.gene35486.t1;Parent=MS.gene35486.t1

Gene Sequence

>MS.gene35486

CCGATCCTTCCCTTGATCCCAAAATCGCCGAATCAGGCTCCTCCATGCTCAACAAATGGCTCGCAGTTCAGCTTTTACCGACTGTGAGTGTTGGCACCATCCAACCACTCGAAGAAATCTTCCTCCATTCCTTCTCTTACCCTTATGCTCTTGTCAGTGGAGACTACAAAAACCTCTACAACTTCATTAAACAACATGGTAACACTCTGTTTATTTAAAGTATAGTTTTTGTTAAAATTCTTAGAGCATCATACTTAGTATATAAATTCTCTCTTTTTCATAAAAAATACTCAAGATTACATAATTTCAATGCATCATGCCCCAGCAAATAATGATGTGAAAAAGAAAACATTTGCTTAATTTATTTGATGTGTAATAAACAATATTGATAACAGGTAAGGAAGTGATAAAAAGTGGAACGGAGTTCGGGTTGAGTGAAGATGAAGCAATCCACAACTTGCTTTTTGTGTTGGGTTTCAACTCATATGGTGGGTTTTCAATTTTCCTTCCAAAATTGATTGAGAGCATAGCGAACGGTCCAACCGGTTTGCAAGAGAAGTTGAGAAAGGAAGCAAGAGAGAAAGGCGGTTCAACTCTTGGGTTTGACTCGTTAAAAGAGTTGGAACTAATAAATTCGGTGGTTTATGAAACCCTGCGAATGAACCCACCGGTTCCACTTCAATTTGGTCGAGCCAGAAAAGATTTTCAACTCAGTTCATATGACTTCGCGTTCAATGTGAAGAAGGGTGAGTTATTATGTGGGTTTCAGAAGCTTGTAATGAGGGACCCTGTCGTGTTTGATGAACCGGAACAATTTAAACCGGAACGGTTCACTAAAGAGAAAGGAGCCGAGTTGTTGAACTATTTGTATTGGTCTAATGGGCCACAAACCGGTTCGCCAACTGTGTCCAATAAACAGTGTGCAGGTAAGGACATCGTGACCTTCACCGCTGCGTTGATTGTGGCACACTTGTTACGTAGGTATGATTTAATTAAAGGGGATGGTAGTTCCATTACTGCCTTAAGGAAGGCCAAATGA

Protein sequence

>MS.gene35486.t1

PILPLIPKSPNQAPPCSTNGSQFSFYRLUVLAPSNHSKKSSSIPSLTLMLLSVETTKTSTTSLNNMVRKUUKVERSSGUVKMKQSTTCFLCWVSTHMVGFQFSFQNULRAURTVQPVCKRSUERKQERKAVQLLGLTRUKSWNUUIRWFMKPCEUTHRFHFNLVEPEKIFNSVHMTSRSMURRVSYYVGFRSLUUGTLSCLMNRNNLNRNGSLKRKEPSCUTICIGLMGHKPVRQLCPINSVQVRTSUPSPLRULWHTCYVGMIULKGMVVPLLPUGRPN