AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene35872

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35872.t1 MTR_5g073200 88.160 549 21 1 1 505 1 549 0.0 973
MS.gene35872.t1 MTR_5g073260 68.681 546 126 2 3 503 5 550 0.0 775
MS.gene35872.t1 MTR_3g464190 66.910 547 137 1 3 505 11 557 0.0 773
MS.gene35872.t1 MTR_5g094620 65.201 546 126 2 4 505 12 537 0.0 738
MS.gene35872.t1 MTR_6g008560 58.577 548 181 3 3 505 11 557 0.0 671
MS.gene35872.t1 MTR_5g062230 59.041 542 177 2 8 505 13 553 0.0 663
MS.gene35872.t1 MTR_6g039440 58.118 542 182 2 8 505 13 553 0.0 660
MS.gene35872.t1 MTR_4g048460 59.049 547 179 2 3 505 16 561 0.0 657
MS.gene35872.t1 MTR_4g081460 50.455 549 224 4 3 505 16 562 0.0 567
MS.gene35872.t1 MTR_4g048460 56.222 450 152 2 3 408 16 464 3.77e-176 504
MS.gene35872.t1 MTR_6g008560 53.616 401 142 1 149 505 1 401 3.39e-156 450
MS.gene35872.t1 MTR_2g082010 39.416 548 283 6 5 505 23 568 2.87e-144 426
MS.gene35872.t1 MTR_2g081980 39.891 549 279 7 6 505 11 557 1.11e-142 422
MS.gene35872.t1 MTR_8g007515 38.838 551 284 8 5 505 9 556 5.72e-134 399
MS.gene35872.t1 MTR_2g082060 36.430 549 287 7 6 505 18 553 2.24e-125 377
MS.gene35872.t1 MTR_4g019550 35.624 553 291 9 6 505 18 558 4.34e-113 346
MS.gene35872.t1 MTR_2g082050 34.241 514 234 9 37 503 1 457 5.75e-93 291
MS.gene35872.t1 MTR_4g045810 31.423 541 321 5 8 503 44 579 2.08e-85 275
MS.gene35872.t1 MTR_2g064425 31.608 541 315 7 9 503 53 584 6.20e-84 271
MS.gene35872.t1 MTR_8g057020 30.147 544 324 8 7 503 53 587 2.83e-78 256
MS.gene35872.t1 MTR_2g064425 30.129 541 308 8 9 503 53 569 4.31e-77 253
MS.gene35872.t1 MTR_7g057340 61.047 172 67 0 334 505 1 172 6.74e-75 234
MS.gene35872.t1 MTR_2g065450 29.705 542 323 10 9 503 58 588 1.45e-74 246
MS.gene35872.t1 MTR_4g092010 29.960 494 288 7 57 501 72 556 4.19e-74 245
MS.gene35872.t1 MTR_2g089120 30.567 494 277 10 44 486 70 548 1.17e-72 241
MS.gene35872.t1 MTR_2g089130 29.622 503 292 10 31 485 58 546 1.84e-72 240
MS.gene35872.t1 MTR_4g092020 30.273 512 299 7 40 503 68 569 9.06e-71 236
MS.gene35872.t1 MTR_7g057390 59.302 172 67 1 334 505 1 169 4.77e-69 219
MS.gene35872.t1 MTR_7g010710 29.197 548 331 10 4 502 13 552 1.54e-68 229
MS.gene35872.t1 MTR_2g064425 37.190 363 174 6 9 325 53 407 7.17e-65 217
MS.gene35872.t1 MTR_3g015080 59.302 172 32 2 334 505 1 134 3.65e-64 204
MS.gene35872.t1 MTR_2g010960 27.514 527 314 11 31 499 1 517 3.99e-62 212
MS.gene35872.t1 MTR_2g064425 34.986 363 167 7 9 325 53 392 4.02e-58 199
MS.gene35872.t1 MTR_3g465090 27.944 501 296 12 55 497 21 514 1.28e-54 191
MS.gene35872.t1 MTR_6g064980 25.813 492 314 6 55 495 21 512 5.68e-54 190
MS.gene35872.t1 MTR_3g063170 26.166 493 311 6 55 495 21 512 1.00e-53 189
MS.gene35872.t1 MTR_3g052120 27.163 497 303 9 56 497 22 514 7.46e-53 187
MS.gene35872.t1 MTR_3g063120 26.582 474 298 5 60 483 1 474 2.54e-52 185
MS.gene35872.t1 MTR_3g063140 25.610 492 315 6 55 495 21 512 5.88e-52 184
MS.gene35872.t1 MTR_5g094530 42.986 221 45 4 159 333 1 186 5.26e-50 169
MS.gene35872.t1 MTR_6g065040 25.964 389 237 5 145 483 9 396 1.66e-42 156
MS.gene35872.t1 MTR_7g050990 50.394 127 48 3 191 313 66 181 4.45e-32 131
MS.gene35872.t1 MTR_3g063160 28.253 269 146 3 55 277 21 288 3.47e-27 111
MS.gene35872.t1 MTR_2g012900 24.158 505 291 18 16 440 212 704 9.94e-22 99.4
MS.gene35872.t1 MTR_3g058160 23.019 530 304 20 59 503 59 569 6.12e-21 96.7
MS.gene35872.t1 MTR_3g058160 22.814 526 305 19 62 505 256 762 8.74e-21 96.7
MS.gene35872.t1 MTR_3g058160 22.814 526 305 19 62 505 269 775 1.04e-20 96.3
MS.gene35872.t1 MTR_3g058160 22.814 526 305 19 62 505 276 782 1.16e-20 96.3
MS.gene35872.t1 MTR_2g012870 22.653 490 305 11 62 484 254 736 1.76e-20 95.5
MS.gene35872.t1 MTR_3g058160 23.193 332 217 12 195 505 489 803 4.85e-14 75.5
MS.gene35872.t1 MTR_7g011770 34.921 126 75 3 58 177 238 362 4.96e-13 72.0
MS.gene35872.t1 MTR_7g011663 35.484 124 73 3 60 177 344 466 2.80e-12 69.7
MS.gene35872.t1 MTR_2g064295 20.312 320 223 11 202 505 459 762 1.88e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35872.t1 AT5G23960 35.897 546 302 5 5 505 3 545 4.19e-129 386
MS.gene35872.t1 AT5G23960 35.949 548 301 6 5 505 3 547 3.15e-128 384
MS.gene35872.t1 AT1G70080 33.942 548 309 8 9 505 66 611 1.63e-105 328
MS.gene35872.t1 AT3G14520 32.163 541 310 7 14 503 68 602 1.14e-103 323
MS.gene35872.t1 AT3G14490 33.394 545 308 6 9 503 60 599 5.74e-103 321
MS.gene35872.t1 AT3G14540 32.532 541 308 7 14 503 65 599 6.93e-99 310
MS.gene35872.t1 AT1G31950 30.056 539 324 4 14 503 70 604 1.78e-98 310
MS.gene35872.t1 AT3G29410 31.919 542 318 6 9 503 64 601 5.40e-98 308
MS.gene35872.t1 AT1G31950 30.000 540 324 5 14 503 70 605 7.61e-98 308
MS.gene35872.t1 AT1G33750 31.667 540 320 6 9 503 66 601 6.91e-97 305
MS.gene35872.t1 AT3G32030 31.492 543 315 7 14 505 68 604 1.35e-93 296
MS.gene35872.t1 AT3G29410 31.263 499 294 4 51 503 1 496 7.95e-89 281
MS.gene35872.t1 AT5G44630 30.741 553 321 10 8 505 12 557 8.13e-88 280
MS.gene35872.t1 AT4G15870 31.169 539 302 12 17 503 75 596 2.36e-83 270
MS.gene35872.t1 AT2G23230 30.347 547 323 11 8 501 55 596 4.22e-83 270
MS.gene35872.t1 AT2G23230 30.769 546 317 13 8 501 55 591 4.58e-81 264
MS.gene35872.t1 AT4G13300 29.926 538 321 9 17 503 20 552 4.71e-81 263
MS.gene35872.t1 AT4G20210 27.007 548 346 7 8 505 57 600 3.77e-80 261
MS.gene35872.t1 AT3G29110 29.908 545 328 8 9 503 55 595 7.03e-80 261
MS.gene35872.t1 AT4G20200 28.440 545 336 7 9 503 62 602 1.43e-79 260
MS.gene35872.t1 AT3G14540 32.294 449 248 6 14 412 65 507 5.43e-79 256
MS.gene35872.t1 AT4G20230 29.104 536 325 10 17 501 70 601 2.28e-78 257
MS.gene35872.t1 AT4G20230 29.104 536 325 10 17 501 82 613 3.34e-78 257
MS.gene35872.t1 AT1G31950 29.103 457 270 5 14 420 70 522 7.86e-76 248
MS.gene35872.t1 AT4G13280 29.346 535 324 9 19 503 22 552 2.01e-75 248
MS.gene35872.t1 AT3G25830 29.982 557 323 13 6 503 44 592 4.54e-74 245
MS.gene35872.t1 AT3G25820 29.982 557 323 13 6 503 44 592 4.54e-74 245
MS.gene35872.t1 AT3G29190 27.911 541 328 9 17 503 67 599 6.69e-74 245
MS.gene35872.t1 AT1G48800 27.473 546 339 10 8 501 62 602 4.71e-72 240
MS.gene35872.t1 AT2G24210 28.752 553 330 11 7 503 44 588 5.71e-72 239
MS.gene35872.t1 AT4G16730 28.902 519 302 12 44 503 27 537 2.67e-71 236
MS.gene35872.t1 AT4G16730 28.916 498 288 11 65 503 1 491 2.12e-69 230
MS.gene35872.t1 AT1G61680 27.345 501 301 6 48 495 79 569 5.39e-69 231
MS.gene35872.t1 AT3G25810 30.335 567 319 18 2 503 40 595 2.36e-68 230
MS.gene35872.t1 AT1G61680 27.146 501 295 7 48 495 79 562 4.17e-66 223
MS.gene35872.t1 AT4G16740 28.957 556 327 13 3 503 20 562 1.01e-65 223
MS.gene35872.t1 AT1G48820 28.336 547 291 14 8 501 62 560 1.02e-65 222
MS.gene35872.t1 AT4G13280 28.224 535 300 11 19 503 22 522 4.83e-64 217
MS.gene35872.t1 AT1G66020 25.678 553 354 8 4 503 48 596 4.08e-63 216
MS.gene35872.t1 AT5G48110 34.426 305 195 5 202 505 39 339 5.90e-59 198
MS.gene35872.t1 AT3G25820 32.383 386 201 9 6 338 44 422 2.46e-55 192
MS.gene35872.t1 AT4G16740 33.611 360 173 11 3 308 20 367 1.53e-49 175
MS.gene35872.t1 AT3G25820 33.333 327 158 9 6 279 44 363 5.46e-45 162
MS.gene35872.t1 AT3G25820 33.333 327 158 9 6 279 44 363 5.46e-45 162
MS.gene35872.t1 AT4G16740 32.628 331 160 10 3 279 20 341 3.00e-41 152
MS.gene35872.t1 AT4G16740 32.628 331 160 10 3 279 20 341 3.00e-41 152
MS.gene35872.t1 AT1G66020 26.316 361 212 7 9 319 56 412 1.19e-40 152
MS.gene35872.t1 AT1G61120 23.725 510 317 17 60 505 283 784 4.92e-21 97.4
MS.gene35872.t1 AT1G79460 20.736 516 323 18 62 503 274 777 2.76e-19 92.0
MS.gene35872.t1 AT4G02780 36.800 125 70 4 60 177 329 451 1.91e-13 73.6

Find 92 sgRNAs with CRISPR-Local

Find 208 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTCTCTTGCTGTGCTATTT+AGG 0.182043 5.1:+56413393 MS.gene35872:CDS
CATAAGAATTATGTTGAAAA+TGG 0.214259 5.1:+56413341 MS.gene35872:CDS
GGTTCGAGGAGAGGATATTT+TGG 0.273538 5.1:+56414176 MS.gene35872:CDS
GTTAATGCTGCTATTGTTAT+TGG 0.277137 5.1:+56416076 MS.gene35872:CDS
AGAACATATGTCCTCATTCT+TGG 0.289423 5.1:+56416426 MS.gene35872:CDS
AATTGATTCAATATGTCGTT+TGG 0.310092 5.1:+56413268 MS.gene35872:CDS
TATTTCTTCATAAAGATCTA+AGG 0.319531 5.1:-56415064 None:intergenic
GGATGGTGGAAGGTAGCTTT+TGG 0.321374 5.1:+56414757 MS.gene35872:CDS
CAGGTGGGATATTAGCTGTT+TGG 0.334916 5.1:+56415002 MS.gene35872:intron
ATAATTATTGTTTAACCATC+TGG 0.336699 5.1:-56415915 None:intergenic
CTGATTACAAACCTAGCGTT+TGG 0.341269 5.1:+56412671 MS.gene35872:CDS
TCGATATGCTTCAGAATCTA+TGG 0.349017 5.1:+56412708 MS.gene35872:CDS
ATTTCTATGCAAGTCAGATT+TGG 0.350759 5.1:-56412644 None:intergenic
TTGATATGTACCAGTTTCAT+TGG 0.363499 5.1:+56415995 MS.gene35872:CDS
TAGAGAAACTTCATATAATC+TGG 0.367058 5.1:-56415033 None:intergenic
TTGTAGATGGTGGAAGGAAT+TGG 0.385282 5.1:+56414701 MS.gene35872:intron
TATTGTTATTGGCAGGATAA+TGG 0.387149 5.1:+56416087 MS.gene35872:CDS
ATGTACCAGTTTCATTGGTA+TGG 0.389719 5.1:+56416000 MS.gene35872:CDS
TGCTTGGAAAGATATGAATA+AGG 0.403555 5.1:+56416519 MS.gene35872:CDS
GTCTCCCATACCAATGAAAC+TGG 0.405809 5.1:-56416005 None:intergenic
TGATTACAAACCTAGCGTTT+GGG 0.410531 5.1:+56412672 MS.gene35872:CDS
ATATGAATAAGGAATGTCTT+AGG 0.416799 5.1:+56416530 MS.gene35872:CDS
ATTGATTCAATATGTCGTTT+GGG 0.419389 5.1:+56413269 MS.gene35872:CDS
ATAATTATTGTGGATGTTGA+GGG 0.420390 5.1:+56414120 MS.gene35872:CDS
ATATGGAACAATTGATGAAT+TGG 0.422048 5.1:+56414878 MS.gene35872:CDS
ATTCATATCTTTCCAAGCAT+TGG 0.425457 5.1:-56416515 None:intergenic
TACAAGTCAAACATAGCTTA+AGG 0.428728 5.1:+56414268 MS.gene35872:CDS
ATTTAGTAAAATAATTATTG+TGG 0.445732 5.1:+56414110 MS.gene35872:CDS
GATGATGCTTATGATGCATA+TGG 0.449013 5.1:+56414861 MS.gene35872:CDS
AATAATTATTGTGGATGTTG+AGG 0.458527 5.1:+56414119 MS.gene35872:CDS
ATGCTGCTATTGTTATTGGC+AGG 0.467879 5.1:+56416080 MS.gene35872:CDS
TGAAGAAGTATAATGTCTCT+AGG 0.468938 5.1:+56416458 MS.gene35872:CDS
GGCTTTCTCTACCACTCACC+TGG 0.475113 5.1:+56414209 MS.gene35872:CDS
GAAAGAGGATTGCCAATGCT+TGG 0.482714 5.1:+56416503 MS.gene35872:CDS
TGGTCTTTGTAGATGGTGGA+AGG 0.494732 5.1:+56414695 MS.gene35872:intron
TTTAAAATACGTGTAAGAAA+AGG 0.501278 5.1:-56416571 None:intergenic
AACTACCGTTTGCAAGAGAT+AGG 0.502401 5.1:+56414736 MS.gene35872:CDS
CTGTGCTATTTAGGTTGTTG+AGG 0.502767 5.1:+56413402 MS.gene35872:CDS
TGTACCAGTTTCATTGGTAT+GGG 0.504466 5.1:+56416001 MS.gene35872:CDS
AGATGTATTCAACAAGTTCA+AGG 0.504545 5.1:+56414074 MS.gene35872:intron
GAGCAGGAAATGCAGAAAAG+TGG 0.515437 5.1:+56415087 MS.gene35872:CDS
GATAATTACACGAATCCTGA+AGG 0.523914 5.1:+56416631 MS.gene35872:CDS
AAAGGCATTGGAATTTCCGT+TGG 0.525158 5.1:-56416553 None:intergenic
TTTGAGCCTCAATATTCTAT+CGG 0.528157 5.1:+56414795 MS.gene35872:CDS
CAATAATTATATACCAACAT+TGG 0.531937 5.1:+56415928 MS.gene35872:CDS
TGAATGTACTCTTCCAATGT+TGG 0.535670 5.1:-56415941 None:intergenic
GTTAATACTCAAACCACCAC+TGG 0.539456 5.1:-56416691 None:intergenic
ACGAGGATGGCTCGATTCGT+TGG 0.539936 5.1:-56414241 None:intergenic
CATATAGCATTCCAAGAATG+AGG 0.542840 5.1:-56416437 None:intergenic
TTTCTTCCGATAGAATATTG+AGG 0.547728 5.1:-56414801 None:intergenic
CAATTCAAGAAGGTAGAAAG+AGG 0.552196 5.1:+56416488 MS.gene35872:CDS
GAAGAAGTATAATGTCTCTA+GGG 0.552743 5.1:+56416459 MS.gene35872:CDS
AAATAATCTCCCCAAACGCT+AGG 0.554023 5.1:-56412682 None:intergenic
ATTCGTTGGCAACAAAGTCC+AGG 0.554062 5.1:-56414227 None:intergenic
CTTATATGACTGAGGCCAGA+TGG 0.559779 5.1:+56415900 MS.gene35872:CDS
AGCTTTGCTTGTAGATCCAG+TGG 0.559785 5.1:+56416675 MS.gene35872:CDS
AACCACATGTTTCTGTTGAT+AGG 0.560262 5.1:-56415964 None:intergenic
TGCATCATAAGCATCATCAA+TGG 0.560407 5.1:-56414856 None:intergenic
ACCATCCTATCTCTTGCAAA+CGG 0.560578 5.1:-56414741 None:intergenic
TCTTTATGAAGAAATAGAGC+AGG 0.566753 5.1:+56415071 MS.gene35872:CDS
GCAAGAGATAGGATGGTGGA+AGG 0.575096 5.1:+56414747 MS.gene35872:CDS
TTTAGGTTGTTGAGGCAACA+AGG 0.580324 5.1:+56413410 MS.gene35872:CDS
ATACGTGTAAGAAAAGGCAT+TGG 0.580790 5.1:-56416565 None:intergenic
TGACTTGTATTGCACGAGGA+TGG 0.581676 5.1:-56414254 None:intergenic
GCTACACATCTCATGGTTCG+AGG 0.582249 5.1:+56414162 MS.gene35872:CDS
AGTCAAACATAGCTTAAGGC+AGG 0.582484 5.1:+56414272 MS.gene35872:CDS
ACATCTCATGGTTCGAGGAG+AGG 0.586076 5.1:+56414167 MS.gene35872:CDS
CTCTGCACAAGAACTTGCCT+AGG 0.587607 5.1:+56414295 MS.gene35872:CDS
ACCGTTTGCAAGAGATAGGA+TGG 0.587976 5.1:+56414740 MS.gene35872:CDS
TTTGCTTGTAGATCCAGTGG+TGG 0.594264 5.1:+56416678 MS.gene35872:CDS
ATAGCACAGCAAGAGAGCAA+AGG 0.599003 5.1:-56413388 None:intergenic
GTATGAAGCTACACATCTCA+TGG 0.601260 5.1:+56414155 MS.gene35872:CDS
ATAATTACACGAATCCTGAA+GGG 0.602129 5.1:+56416632 MS.gene35872:CDS
GATTACAAACCTAGCGTTTG+GGG 0.603119 5.1:+56412673 MS.gene35872:CDS
TAAGGAATGTCTTAGGCCAA+CGG 0.603804 5.1:+56416537 MS.gene35872:CDS
AACAAGTTCAAGGATGAGCA+AGG 0.607713 5.1:+56414084 MS.gene35872:CDS
AGGGAAGCTTCAATTCAAGA+AGG 0.608492 5.1:+56416478 MS.gene35872:CDS
GGCAACAAAGTCCAGGTGAG+TGG 0.625375 5.1:-56414220 None:intergenic
TAGATTCTGAAGCATATCGA+AGG 0.635933 5.1:-56412705 None:intergenic
CATTCAAGCTTATATGACTG+AGG 0.643061 5.1:+56415892 MS.gene35872:CDS
CACAGAGGAGATCATCAAGT+GGG 0.651847 5.1:+56416033 MS.gene35872:CDS
ACACATCAATAACACGTGAG+AGG 0.662071 5.1:-56416594 None:intergenic
GTGAGTGGTAGAGAAAGCCA+AGG 0.662657 5.1:-56414205 None:intergenic
TAATTACACGAATCCTGAAG+GGG 0.663761 5.1:+56416633 MS.gene35872:CDS
GGATGATATTGCGTCCAATG+AGG 0.668064 5.1:+56416108 MS.gene35872:CDS
TAATTATTGTGGATGTTGAG+GGG 0.680540 5.1:+56414121 MS.gene35872:CDS
CACCTATCAACAGAAACATG+TGG 0.690608 5.1:+56415962 MS.gene35872:CDS
CCACTTGATGATCTCCTCTG+TGG 0.690711 5.1:-56416032 None:intergenic
CCACAGAGGAGATCATCAAG+TGG 0.692314 5.1:+56416032 MS.gene35872:CDS
TGTTTGACTTGTATTGCACG+AGG 0.715740 5.1:-56414258 None:intergenic
GTTTGCAAGAGATAGGATGG+TGG 0.725981 5.1:+56414743 MS.gene35872:CDS
TATGGGAGACATAACCACAG+AGG 0.810504 5.1:+56416018 MS.gene35872:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAAAATTATTATCATAAA+AGG + chr5.1:56416222-56416241 MS.gene35872:intron 10.0%
!! ATTTAGTAAAATAATTATTG+TGG + chr5.1:56414110-56414129 MS.gene35872:CDS 10.0%
!! CAAATTATTAACAAATTTAA+AGG + chr5.1:56413733-56413752 MS.gene35872:intron 10.0%
!! TAATAATAATAATAATCAGA+AGG - chr5.1:56414524-56414543 None:intergenic 10.0%
!!! AAGTAAATTTCTTTATATTT+TGG - chr5.1:56415835-56415854 None:intergenic 10.0%
!!! ATTGAGTATTTTTTTAAAAA+TGG + chr5.1:56413861-56413880 MS.gene35872:intron 10.0%
!!! ATTTAAAGGTATATATAATA+TGG + chr5.1:56413747-56413766 MS.gene35872:intron 10.0%
!!! ATTTTAAAGTTTTTTTTTTG+TGG + chr5.1:56415183-56415202 MS.gene35872:intron 10.0%
!!! TTTTATAATGATAAAAATTG+AGG - chr5.1:56413842-56413861 None:intergenic 10.0%
!! AACATTTAGAGATTAATATA+TGG + chr5.1:56412737-56412756 MS.gene35872:intron 15.0%
!! ATTGAACCATAAATATATAA+AGG + chr5.1:56412826-56412845 MS.gene35872:intron 15.0%
!! CTTATAATTATATTGCATTA+TGG + chr5.1:56415852-56415871 MS.gene35872:intron 15.0%
!! TAATTGCTATATCTATAATT+GGG + chr5.1:56413625-56413644 MS.gene35872:intron 15.0%
!! TTAATTGCTATATCTATAAT+TGG + chr5.1:56413624-56413643 MS.gene35872:intron 15.0%
!! TTTACATTGAATTAAAACAA+GGG - chr5.1:56416360-56416379 None:intergenic 15.0%
!!! AATTAGTTCTTATTAATTGT+TGG - chr5.1:56412891-56412910 None:intergenic 15.0%
!!! ATCAACTTTTTACTTATATT+TGG + chr5.1:56413014-56413033 MS.gene35872:intron 15.0%
!!! ATTTTATATTTATACCTCAT+TGG - chr5.1:56416125-56416144 None:intergenic 15.0%
!!! ATTTTTTTTCCTATTTACAA+AGG - chr5.1:56414477-56414496 None:intergenic 15.0%
!!! TATTTTTTTAAAAATGGCAA+GGG + chr5.1:56413867-56413886 MS.gene35872:intron 15.0%
!! ATAATTATATTGCATTATGG+TGG + chr5.1:56415855-56415874 MS.gene35872:intron 20.0%
!! ATAATTATTGTTTAACCATC+TGG - chr5.1:56415918-56415937 None:intergenic 20.0%
!! CAATAATTATATACCAACAT+TGG + chr5.1:56415928-56415947 MS.gene35872:CDS 20.0%
!! CATAAGAATTATGTTGAAAA+TGG + chr5.1:56413341-56413360 MS.gene35872:CDS 20.0%
!! CTATTCAGATTTAAGAAAAA+TGG - chr5.1:56413804-56413823 None:intergenic 20.0%
!! GTCTTACCTTTATATATTTA+TGG - chr5.1:56412835-56412854 None:intergenic 20.0%
!! GTTTACATTGAATTAAAACA+AGG - chr5.1:56416361-56416380 None:intergenic 20.0%
!! TAAATGTTGAAATATAGTAG+TGG + chr5.1:56415548-56415567 MS.gene35872:intron 20.0%
!! TATTTCTTCATAAAGATCTA+AGG - chr5.1:56415067-56415086 None:intergenic 20.0%
!! TGGTGATAATAAATAAATTG+AGG - chr5.1:56413104-56413123 None:intergenic 20.0%
!!! AATACATCTAGTGTTTTTAT+TGG - chr5.1:56414063-56414082 None:intergenic 20.0%
!!! AATGTTATGTAGTTTTTGAA+TGG - chr5.1:56415784-56415803 None:intergenic 20.0%
!!! GTATTTTTTTAAAAATGGCA+AGG + chr5.1:56413866-56413885 MS.gene35872:intron 20.0%
!!! TCAACATTTAGTATTGAAAT+TGG - chr5.1:56415538-56415557 None:intergenic 20.0%
!!! TTAAAGTTTTTTTTTTGTGG+TGG + chr5.1:56415186-56415205 MS.gene35872:intron 20.0%
!!! TTGAATGGATTTAATGTTAA+GGG - chr5.1:56415769-56415788 None:intergenic 20.0%
!!! TTTAAAATACGTGTAAGAAA+AGG - chr5.1:56416574-56416593 None:intergenic 20.0%
!!! TTTGAATGGATTTAATGTTA+AGG - chr5.1:56415770-56415789 None:intergenic 20.0%
!!! TTTTAATGAAAGTGATTTTC+AGG + chr5.1:56414983-56415002 MS.gene35872:intron 20.0%
! AAACACTAAAAAACAATGTG+AGG + chr5.1:56413198-56413217 MS.gene35872:CDS 25.0%
! AACACTAAAAAACAATGTGA+GGG + chr5.1:56413199-56413218 MS.gene35872:CDS 25.0%
! AACATGACTAAATTTGTAAG+TGG + chr5.1:56412914-56412933 MS.gene35872:intron 25.0%
! AACTGAACTTAGAGTAAAAA+GGG - chr5.1:56415730-56415749 None:intergenic 25.0%
! AATAATTATTGTGGATGTTG+AGG + chr5.1:56414119-56414138 MS.gene35872:CDS 25.0%
! ACAATTCTTCAAAAGAAGTA+AGG - chr5.1:56412857-56412876 None:intergenic 25.0%
! ACATAAGATTACTTAAAGAC+TGG - chr5.1:56413491-56413510 None:intergenic 25.0%
! ATAATTATTGTGGATGTTGA+GGG + chr5.1:56414120-56414139 MS.gene35872:CDS 25.0%
! ATATGAATAAGGAATGTCTT+AGG + chr5.1:56416530-56416549 MS.gene35872:CDS 25.0%
! ATATGGAACAATTGATGAAT+TGG + chr5.1:56414878-56414897 MS.gene35872:CDS 25.0%
! ATGATGAAAACTTACTCATT+TGG + chr5.1:56414364-56414383 MS.gene35872:intron 25.0%
! CACAAGTTAAGAACTAAAAA+AGG - chr5.1:56415642-56415661 None:intergenic 25.0%
! CAGATTTAAGAAAAATGGTA+AGG - chr5.1:56413799-56413818 None:intergenic 25.0%
! GAGCAAGAAAATATAGATAA+AGG - chr5.1:56413939-56413958 None:intergenic 25.0%
! GGTATCAAATGAAACAAAAA+TGG + chr5.1:56416054-56416073 MS.gene35872:CDS 25.0%
! TAAAGAAAGAACGTAAAGTT+TGG - chr5.1:56413990-56414009 None:intergenic 25.0%
! TACCCTAAAATTATTTCCTA+TGG - chr5.1:56413595-56413614 None:intergenic 25.0%
! TAGAGAAACTTCATATAATC+TGG - chr5.1:56415036-56415055 None:intergenic 25.0%
!! AATTGATTCAATATGTCGTT+TGG + chr5.1:56413268-56413287 MS.gene35872:CDS 25.0%
!! ATTGATTCAATATGTCGTTT+GGG + chr5.1:56413269-56413288 MS.gene35872:CDS 25.0%
!! ATTTATTATCACCACTCTTT+TGG + chr5.1:56413110-56413129 MS.gene35872:intron 25.0%
!! CACCATAGGAAATAATTTTA+GGG + chr5.1:56413590-56413609 MS.gene35872:intron 25.0%
!! GGACTTCTGAAAAATATTTA+AGG + chr5.1:56413768-56413787 MS.gene35872:intron 25.0%
!! TAAGAGTTTGTTCAATATCT+TGG + chr5.1:56414033-56414052 MS.gene35872:intron 25.0%
!! TCACCATAGGAAATAATTTT+AGG + chr5.1:56413589-56413608 MS.gene35872:intron 25.0%
!! TGAATTGGAACTTTTTACTA+AGG + chr5.1:56414893-56414912 MS.gene35872:CDS 25.0%
!! TTTTTACTAAGGCAATTGAA+AGG + chr5.1:56414904-56414923 MS.gene35872:CDS 25.0%
!!! AAATAAGTTGATGACATACT+TGG - chr5.1:56413449-56413468 None:intergenic 25.0%
!!! AATTAAGTGCACTTTTTCTA+AGG - chr5.1:56413252-56413271 None:intergenic 25.0%
!!! ATTAAGTGCACTTTTTCTAA+GGG - chr5.1:56413251-56413270 None:intergenic 25.0%
!!! CTTCAATGTCTTTGTTTTAA+GGG + chr5.1:56416156-56416175 MS.gene35872:intron 25.0%
!!! GTTACCTCAATTTTTTCTAA+GGG - chr5.1:56415688-56415707 None:intergenic 25.0%
!!! TCTTCAATGTCTTTGTTTTA+AGG + chr5.1:56416155-56416174 MS.gene35872:intron 25.0%
!!! TGTTACCTCAATTTTTTCTA+AGG - chr5.1:56415689-56415708 None:intergenic 25.0%
!!! TTTTGAAAATGAGATTGAAG+AGG + chr5.1:56413304-56413323 MS.gene35872:CDS 25.0%
AAAACAAGGGAAATGCTAAT+CGG - chr5.1:56416347-56416366 None:intergenic 30.0%
AACAAACTCTTAGAGATATG+AGG - chr5.1:56414025-56414044 None:intergenic 30.0%
ACATACACTCCTTTGTAAAT+AGG + chr5.1:56414465-56414484 MS.gene35872:intron 30.0%
AGATGTATTCAACAAGTTCA+AGG + chr5.1:56414074-56414093 MS.gene35872:intron 30.0%
AGCATACATCAAAAGGAATT+CGG + chr5.1:56414413-56414432 MS.gene35872:intron 30.0%
ATCTAATCAAATCTCACCAT+AGG + chr5.1:56413576-56413595 MS.gene35872:intron 30.0%
ATTCATATCTTTCCAAGCAT+TGG - chr5.1:56416518-56416537 None:intergenic 30.0%
ATTTCTATGCAAGTCAGATT+TGG - chr5.1:56412647-56412666 None:intergenic 30.0%
CAACTGAACTTAGAGTAAAA+AGG - chr5.1:56415731-56415750 None:intergenic 30.0%
GTTAATGCTGCTATTGTTAT+TGG + chr5.1:56416076-56416095 MS.gene35872:CDS 30.0%
TAATTATTGTGGATGTTGAG+GGG + chr5.1:56414121-56414140 MS.gene35872:CDS 30.0%
TACAAGTCAAACATAGCTTA+AGG + chr5.1:56414268-56414287 MS.gene35872:CDS 30.0%
TCTTTATGAAGAAATAGAGC+AGG + chr5.1:56415071-56415090 MS.gene35872:CDS 30.0%
TGCATAATATATGCAAAGTC+CGG - chr5.1:56415226-56415245 None:intergenic 30.0%
TGCTTGGAAAGATATGAATA+AGG + chr5.1:56416519-56416538 MS.gene35872:CDS 30.0%
TTGATATGTACCAGTTTCAT+TGG + chr5.1:56415995-56416014 MS.gene35872:CDS 30.0%
TTTAAAAGCTTCTACGTGTA+TGG + chr5.1:56415285-56415304 MS.gene35872:intron 30.0%
TTTCTTCCGATAGAATATTG+AGG - chr5.1:56414804-56414823 None:intergenic 30.0%
TTTGAGCCTCAATATTCTAT+CGG + chr5.1:56414795-56414814 MS.gene35872:CDS 30.0%
! ATTCCTTTTGATGTATGCTT+TGG - chr5.1:56414412-56414431 None:intergenic 30.0%
! GAAGAAGTATAATGTCTCTA+GGG + chr5.1:56416459-56416478 MS.gene35872:CDS 30.0%
! TATTGTTATTGGCAGGATAA+TGG + chr5.1:56416087-56416106 MS.gene35872:CDS 30.0%
! TGAAGAAGTATAATGTCTCT+AGG + chr5.1:56416458-56416477 MS.gene35872:CDS 30.0%
!! TAATGAAAGTGATTTTCAGG+TGG + chr5.1:56414986-56415005 MS.gene35872:intron 30.0%
!!! AATGAAAGTGATTTTCAGGT+GGG + chr5.1:56414987-56415006 MS.gene35872:intron 30.0%
!!! GTTAAGGGAGTTTTTTTTAG+AGG - chr5.1:56415754-56415773 None:intergenic 30.0%
!!! GTTGTTGTTGTTGTTGTTTT+TGG + chr5.1:56414675-56414694 MS.gene35872:intron 30.0%
!!! TTGTTTTTGGTCTTTGTAGA+TGG + chr5.1:56414688-56414707 MS.gene35872:intron 30.0%
AACCTCTCAAAAAGTTGCAA+AGG - chr5.1:56413897-56413916 None:intergenic 35.0%
AAGCTACATTTCCATATACG+AGG + chr5.1:56414329-56414348 MS.gene35872:intron 35.0%
ACGACCCTTAGAAAAAATTG+AGG + chr5.1:56415681-56415700 MS.gene35872:intron 35.0%
ACTACTACAGAAAAGCAGTA+CGG + chr5.1:56415127-56415146 MS.gene35872:intron 35.0%
AGAACATATGTCCTCATTCT+TGG + chr5.1:56416426-56416445 MS.gene35872:CDS 35.0%
ATGTACCAGTTTCATTGGTA+TGG + chr5.1:56416000-56416019 MS.gene35872:CDS 35.0%
ATTGAAGCCCTTACTTGAAA+AGG - chr5.1:56414442-56414461 None:intergenic 35.0%
CAATTCAAGAAGGTAGAAAG+AGG + chr5.1:56416488-56416507 MS.gene35872:CDS 35.0%
CATATAGCATTCCAAGAATG+AGG - chr5.1:56416440-56416459 None:intergenic 35.0%
CATTCAAGCTTATATGACTG+AGG + chr5.1:56415892-56415911 MS.gene35872:CDS 35.0%
GAACTTAGAGTAAAAAGGGT+AGG - chr5.1:56415726-56415745 None:intergenic 35.0%
GATGATGCTTATGATGCATA+TGG + chr5.1:56414861-56414880 MS.gene35872:CDS 35.0%
GCATAATATATGCAAAGTCC+GGG - chr5.1:56415225-56415244 None:intergenic 35.0%
TAACCAAGTAACCAAAAGAG+TGG - chr5.1:56413124-56413143 None:intergenic 35.0%
TCGATATGCTTCAGAATCTA+TGG + chr5.1:56412708-56412727 MS.gene35872:CDS 35.0%
TGAATGTACTCTTCCAATGT+TGG - chr5.1:56415944-56415963 None:intergenic 35.0%
TGATTACAAACCTAGCGTTT+GGG + chr5.1:56412672-56412691 MS.gene35872:CDS 35.0%
TGCATCATAAGCATCATCAA+TGG - chr5.1:56414859-56414878 None:intergenic 35.0%
TGTACCAGTTTCATTGGTAT+GGG + chr5.1:56416001-56416020 MS.gene35872:CDS 35.0%
! AACCACATGTTTCTGTTGAT+AGG - chr5.1:56415967-56415986 None:intergenic 35.0%
! AATGTTTTCATTTCCCCTTC+AGG - chr5.1:56416649-56416668 None:intergenic 35.0%
! AGTAAGTTTTCATCATGCGA+AGG - chr5.1:56414360-56414379 None:intergenic 35.0%
! ATACGTGTAAGAAAAGGCAT+TGG - chr5.1:56416568-56416587 None:intergenic 35.0%
! TTTTGTGAGCTTAACTCAGT+TGG - chr5.1:56415258-56415277 None:intergenic 35.0%
!! TACCTTTGCAACTTTTTGAG+AGG + chr5.1:56413892-56413911 MS.gene35872:intron 35.0%
!! TAGATTCTGAAGCATATCGA+AGG - chr5.1:56412708-56412727 None:intergenic 35.0%
!! TAGTTCTTAACTTGTGCCTT+AGG + chr5.1:56415646-56415665 MS.gene35872:intron 35.0%
!! TTTTTGGTCTTTGTAGATGG+TGG + chr5.1:56414691-56414710 MS.gene35872:intron 35.0%
AAAGTCCGGGATTCAAACAT+CGG - chr5.1:56415212-56415231 None:intergenic 40.0%
AAATAATCTCCCCAAACGCT+AGG - chr5.1:56412685-56412704 None:intergenic 40.0%
AACAAGTTCAAGGATGAGCA+AGG + chr5.1:56414084-56414103 MS.gene35872:CDS 40.0%
AACTACCGTTTGCAAGAGAT+AGG + chr5.1:56414736-56414755 MS.gene35872:CDS 40.0%
ACACATCAATAACACGTGAG+AGG - chr5.1:56416597-56416616 None:intergenic 40.0%
ACCATCCTATCTCTTGCAAA+CGG - chr5.1:56414744-56414763 None:intergenic 40.0%
AGGGAAGCTTCAATTCAAGA+AGG + chr5.1:56416478-56416497 MS.gene35872:CDS 40.0%
AGTCAAACATAGCTTAAGGC+AGG + chr5.1:56414272-56414291 MS.gene35872:CDS 40.0%
ATGGTTCAATGTTGCATGCA+TGG - chr5.1:56412816-56412835 None:intergenic 40.0%
CACCTATCAACAGAAACATG+TGG + chr5.1:56415962-56415981 MS.gene35872:CDS 40.0%
CTACATTTCCATATACGAGG+AGG + chr5.1:56414332-56414351 MS.gene35872:intron 40.0%
CTCTTTGTTCAACACTTTGC+AGG + chr5.1:56413145-56413164 MS.gene35872:intron 40.0%
CTGATTACAAACCTAGCGTT+TGG + chr5.1:56412671-56412690 MS.gene35872:CDS 40.0%
GATTACAAACCTAGCGTTTG+GGG + chr5.1:56412673-56412692 MS.gene35872:CDS 40.0%
GCTCCAAAGCATACATCAAA+AGG + chr5.1:56414406-56414425 MS.gene35872:intron 40.0%
GTATGAAGCTACACATCTCA+TGG + chr5.1:56414155-56414174 MS.gene35872:CDS 40.0%
TAAGGAATGTCTTAGGCCAA+CGG + chr5.1:56416537-56416556 MS.gene35872:CDS 40.0%
TTGTATGCTTAACGAGTGCA+CGG - chr5.1:56416199-56416218 None:intergenic 40.0%
! ATGCTGCTATTGTTATTGGC+AGG + chr5.1:56416080-56416099 MS.gene35872:CDS 40.0%
! TGAGCTTAACTCAGTTGGTA+GGG - chr5.1:56415253-56415272 None:intergenic 40.0%
!! AAAGGCATTGGAATTTCCGT+TGG - chr5.1:56416556-56416575 None:intergenic 40.0%
!! AGGAGAGGATATTTTGGAAG+AGG + chr5.1:56414182-56414201 MS.gene35872:CDS 40.0%
!! CTGTGCTATTTAGGTTGTTG+AGG + chr5.1:56413402-56413421 MS.gene35872:CDS 40.0%
!! TCACCACTCTTTTGGTTACT+TGG + chr5.1:56413118-56413137 MS.gene35872:intron 40.0%
!! TCGTTGTTCAAGTTGTGTTG+AGG - chr5.1:56413073-56413092 None:intergenic 40.0%
!! TGTTTGACTTGTATTGCACG+AGG - chr5.1:56414261-56414280 None:intergenic 40.0%
!! TTGTAGATGGTGGAAGGAAT+TGG + chr5.1:56414701-56414720 MS.gene35872:intron 40.0%
!! TTTAGGTTGTTGAGGCAACA+AGG + chr5.1:56413410-56413429 MS.gene35872:CDS 40.0%
!!! GTTTTAAGGGTCATGCTAAC+CGG + chr5.1:56416169-56416188 MS.gene35872:intron 40.0%
!!! TCGGCAACCTTTTCAAGTAA+GGG + chr5.1:56414432-56414451 MS.gene35872:intron 40.0%
!!! TTCGGCAACCTTTTCAAGTA+AGG + chr5.1:56414431-56414450 MS.gene35872:intron 40.0%
ACCGTTTGCAAGAGATAGGA+TGG + chr5.1:56414740-56414759 MS.gene35872:CDS 45.0%
AGCTTTGCTTGTAGATCCAG+TGG + chr5.1:56416675-56416694 MS.gene35872:CDS 45.0%
ATAGCACAGCAAGAGAGCAA+AGG - chr5.1:56413391-56413410 None:intergenic 45.0%
ATTCGTTGGCAACAAAGTCC+AGG - chr5.1:56414230-56414249 None:intergenic 45.0%
CACAGAGGAGATCATCAAGT+GGG + chr5.1:56416033-56416052 MS.gene35872:CDS 45.0%
CAGGTGGGATATTAGCTGTT+TGG + chr5.1:56415002-56415021 MS.gene35872:intron 45.0%
CTTATATGACTGAGGCCAGA+TGG + chr5.1:56415900-56415919 MS.gene35872:CDS 45.0%
GAAAGAGGATTGCCAATGCT+TGG + chr5.1:56416503-56416522 MS.gene35872:CDS 45.0%
GAGCAGGAAATGCAGAAAAG+TGG + chr5.1:56415087-56415106 MS.gene35872:CDS 45.0%
GGATGATATTGCGTCCAATG+AGG + chr5.1:56416108-56416127 MS.gene35872:CDS 45.0%
GTCTCCCATACCAATGAAAC+TGG - chr5.1:56416008-56416027 None:intergenic 45.0%
GTGAGCTTAACTCAGTTGGT+AGG - chr5.1:56415254-56415273 None:intergenic 45.0%
GTTTGCAAGAGATAGGATGG+TGG + chr5.1:56414743-56414762 MS.gene35872:CDS 45.0%
TATGGGAGACATAACCACAG+AGG + chr5.1:56416018-56416037 MS.gene35872:CDS 45.0%
TGTATGCTTAACGAGTGCAC+GGG - chr5.1:56416198-56416217 None:intergenic 45.0%
TTTGCTTGTAGATCCAGTGG+TGG + chr5.1:56416678-56416697 MS.gene35872:CDS 45.0%
! GAAGGTAGCTTTTGGGCTAT+GGG + chr5.1:56414765-56414784 MS.gene35872:CDS 45.0%
! GGTTCGAGGAGAGGATATTT+TGG + chr5.1:56414176-56414195 MS.gene35872:CDS 45.0%
! TCGTGCTAACTTGTGTCCTA+AGG - chr5.1:56415665-56415684 None:intergenic 45.0%
! TGACTTGTATTGCACGAGGA+TGG - chr5.1:56414257-56414276 None:intergenic 45.0%
!! GCTCTCTTGCTGTGCTATTT+AGG + chr5.1:56413393-56413412 MS.gene35872:CDS 45.0%
!! GGATATTTTGGAAGAGGCCT+TGG + chr5.1:56414188-56414207 MS.gene35872:CDS 45.0%
!! TGGTCTTTGTAGATGGTGGA+AGG + chr5.1:56414695-56414714 MS.gene35872:intron 45.0%
!!! GATGGTGGAAGGTAGCTTTT+GGG + chr5.1:56414758-56414777 MS.gene35872:CDS 45.0%
!!! CAAATTAAATTTTAATTTAA+TGG + chr5.1:56412943-56412962 MS.gene35872:intron 5.0%
ACATCTCATGGTTCGAGGAG+AGG + chr5.1:56414167-56414186 MS.gene35872:CDS 50.0%
ATGCTTAACCAGTGCTCCAG+AGG + chr5.1:56416319-56416338 MS.gene35872:intron 50.0%
CCACAGAGGAGATCATCAAG+TGG + chr5.1:56416032-56416051 MS.gene35872:CDS 50.0%
CGAAGGATCCTCCTCGTATA+TGG - chr5.1:56414343-56414362 None:intergenic 50.0%
CTCTGCACAAGAACTTGCCT+AGG + chr5.1:56414295-56414314 MS.gene35872:CDS 50.0%
GCACAAGAACTTGCCTAGGT+TGG + chr5.1:56414299-56414318 MS.gene35872:intron 50.0%
GCTACACATCTCATGGTTCG+AGG + chr5.1:56414162-56414181 MS.gene35872:CDS 50.0%
GTATGCTTAACGAGTGCACG+GGG - chr5.1:56416197-56416216 None:intergenic 50.0%
GTGAGTGGTAGAGAAAGCCA+AGG - chr5.1:56414208-56414227 None:intergenic 50.0%
! CAAGAACTTGCCTAGGTTGG+AGG + chr5.1:56414302-56414321 MS.gene35872:intron 50.0%
! CCACTTGATGATCTCCTCTG+TGG - chr5.1:56416035-56416054 None:intergenic 50.0%
! GAAATGCTAATCGGTGCCTC+TGG - chr5.1:56416338-56416357 None:intergenic 50.0%
! GGAAGGTAGCTTTTGGGCTA+TGG + chr5.1:56414764-56414783 MS.gene35872:CDS 50.0%
!! GCAAGAGATAGGATGGTGGA+AGG + chr5.1:56414747-56414766 MS.gene35872:CDS 50.0%
!!! GGATGGTGGAAGGTAGCTTT+TGG + chr5.1:56414757-56414776 MS.gene35872:CDS 50.0%
GGCAACAAAGTCCAGGTGAG+TGG - chr5.1:56414223-56414242 None:intergenic 55.0%
GGCTTTCTCTACCACTCACC+TGG + chr5.1:56414209-56414228 MS.gene35872:CDS 55.0%
GGTGGCCGATGTTTGAATCC+CGG + chr5.1:56415204-56415223 MS.gene35872:intron 55.0%
TAGCTTCGTGCCTCCAACCT+AGG - chr5.1:56414315-56414334 None:intergenic 55.0%
TTAACGAGTGCACGGGGTAC+CGG - chr5.1:56416191-56416210 None:intergenic 55.0%
! ACGAGGATGGCTCGATTCGT+TGG - chr5.1:56414244-56414263 None:intergenic 55.0%
!! AATCGGTGCCTCTGGAGCAC+TGG - chr5.1:56416330-56416349 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 56412637 56416705 56412637 ID=MS.gene35872
chr5.1 mRNA 56412637 56416705 56412637 ID=MS.gene35872.t1;Parent=MS.gene35872
chr5.1 exon 56412637 56412729 56412637 ID=MS.gene35872.t1.exon1;Parent=MS.gene35872.t1
chr5.1 CDS 56412637 56412729 56412637 ID=cds.MS.gene35872.t1;Parent=MS.gene35872.t1
chr5.1 exon 56413167 56413449 56413167 ID=MS.gene35872.t1.exon2;Parent=MS.gene35872.t1
chr5.1 CDS 56413167 56413449 56413167 ID=cds.MS.gene35872.t1;Parent=MS.gene35872.t1
chr5.1 exon 56414076 56414316 56414076 ID=MS.gene35872.t1.exon3;Parent=MS.gene35872.t1
chr5.1 CDS 56414076 56414316 56414076 ID=cds.MS.gene35872.t1;Parent=MS.gene35872.t1
chr5.1 exon 56414707 56414925 56414707 ID=MS.gene35872.t1.exon4;Parent=MS.gene35872.t1
chr5.1 CDS 56414707 56414925 56414707 ID=cds.MS.gene35872.t1;Parent=MS.gene35872.t1
chr5.1 exon 56415005 56415143 56415005 ID=MS.gene35872.t1.exon5;Parent=MS.gene35872.t1
chr5.1 CDS 56415005 56415143 56415005 ID=cds.MS.gene35872.t1;Parent=MS.gene35872.t1
chr5.1 exon 56415881 56416129 56415881 ID=MS.gene35872.t1.exon6;Parent=MS.gene35872.t1
chr5.1 CDS 56415881 56416129 56415881 ID=cds.MS.gene35872.t1;Parent=MS.gene35872.t1
chr5.1 exon 56416412 56416705 56416412 ID=MS.gene35872.t1.exon7;Parent=MS.gene35872.t1
chr5.1 CDS 56416412 56416705 56416412 ID=cds.MS.gene35872.t1;Parent=MS.gene35872.t1
Gene Sequence

>MS.gene35872

ATGGCTTCCAAATCTGACTTGCATAGAAATGTTGCTGATTACAAACCTAGCGTTTGGGGAGATTATTTCCTTCGATATGCTTCAGAATCTATGGTACGTAAACATTTAGAGATTAATATATGGTACACAAACATATACTATATTTCTATTTTGCGTGCATTTTTATTATGTTTTGACCATGCATGCAACATTGAACCATAAATATATAAAGGTAAGACCTTACTTCTTTTGAAGAATTGTTGATAATTTATCCAACAATTAATAAGAACTAATTAATAACATGACTAAATTTGTAAGTGGCACTCACAAATTAAATTTTAATTTAATGGTTGTTGAGTAAATTATACATGATTCTTCTTGATATAAATAAGTGATCGATCAACTTTTTACTTATATTTGGTATAAAAAAAACTACTACATTTATACTTATGCACCTCAACACAACTTGAACAACGATTAGCACACCTCAATTTATTTATTATCACCACTCTTTTGGTTACTTGGTTAACTCTTTGTTCAACACTTTGCAGGAAGTTGATCAAAGTATTGAAGCACAAATTGAAACACTAAAAAACAATGTGAGGGACATGCTTGTCTCAAAGACTGAGAATCCCTTAGAAAAAGTGCACTTAATTGATTCAATATGTCGTTTGGGTGTGAGCTATCATTTTGAAAATGAGATTGAAGAGGTTTTGCAACATATTCATAAGAATTATGTTGAAAATGGAGAAATAACTATTTTTGAAGACAACCTTTGCTCTCTTGCTGTGCTATTTAGGTTGTTGAGGCAACAAGGACTTCATGTTTCACCAAGTATGTCATCAACTTATTTACACTGATTTCTCTTTATACCAGTCTTTAAGTAATCTTATGTTTAATACAATTATTAGAAAAAAATAAACATATGCATTGATATATTGTAAATAGTTTTATACATTCATCTAATCAAATCTCACCATAGGAAATAATTTTAGGGTATGATAAATCTTAATTGCTATATCTATAATTGGGCATATGTGTAAGTGCATACTAATCAAACACATAAGAGTTAAAAATGAGTGCAAAAGATTGTAAGAGTGATTTTAGATAAATCGTACAAATTATTAACAAATTTAAAGGTATATATAATATGGACTTCTGAAAAATATTTAAGGTAGATCCTTACCATTTTTCTTAAATCTGAATAGAATATTACATCTCTACCTCAATTTTTATCATTATAAAATTGAGTATTTTTTTAAAAATGGCAAGGGTTTACCTTTGCAACTTTTTGAGAGGTTCAAATTAGACATTGATGTGCCTTTATCTATATTTTCTTGCTCTGAAAACACATTGAATTATTATGTTAATCCAAACTTTACGTTCTTTCTTTAATTTTTTTTAAACCTCATATCTCTAAGAGTTTGTTCAATATCTTGGTTTACCAATAAAAACACTAGATGTATTCAACAAGTTCAAGGATGAGCAAGGAAAATTTAGTAAAATAATTATTGTGGATGTTGAGGGGATGTTAAGCTTGTATGAAGCTACACATCTCATGGTTCGAGGAGAGGATATTTTGGAAGAGGCCTTGGCTTTCTCTACCACTCACCTGGACTTTGTTGCCAACGAATCGAGCCATCCTCGTGCAATACAAGTCAAACATAGCTTAAGGCAGGCTCTGCACAAGAACTTGCCTAGGTTGGAGGCACGAAGCTACATTTCCATATACGAGGAGGATCCTTCGCATGATGAAAACTTACTCATTTGGCGAAACTAGATTTCAATACGCTCCAAAGCATACATCAAAAGGAATTCGGCAACCTTTTCAAGTAAGGGCTTCAATCATACATACACTCCTTTGTAAATAGGAAAAAAAATTAATGTAATTTGATATAAACTACTCCTTCTGATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTGTTATTGTTGTTGTTGTTATTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTTGGTCTTTGTAGATGGTGGAAGGAATTGGATGCAGCTAATAAACTACCGTTTGCAAGAGATAGGATGGTGGAAGGTAGCTTTTGGGCTATGGGACTATTTTTTGAGCCTCAATATTCTATCGGAAGAAAATTTATGTCGAAATTAATCATCATAATAACAGCCATTGATGATGCTTATGATGCATATGGAACAATTGATGAATTGGAACTTTTTACTAAGGCAATTGAAAGGTCAGTTAGCACATCATTTATATAAATATAAATATATGTGTATATATTTCATCTAAATTTTAATGAAAGTGATTTTCAGGTGGGATATTAGCTGTTTGGATGATCTTCCAGATTATATGAAGTTTCTCTACAGAATAACCTTAGATCTTTATGAAGAAATAGAGCAGGAAATGCAGAAAAGTGGAAGAGCATATGCAATAAACTACTACAGAAAAGCAGTACGGATTTTCGTCTTTTTTATTTATATTTATATAATTATTTTAAAGTTTTTTTTTTGTGGTGGCCGATGTTTGAATCCCGGACTTTGCATATATTATGCATTGTCCCTACCAACTGAGTTAAGCTCACAAAAACAATTATTTAAAAGCTTCTACGTGTATGGTTCAATTGCTTTAGTCAAATTTTAATTTATATTTTTTTCTGAAAACTTCTTTTTTTACTTGAAAAGAATTTAAAATATTAGTATAAATTTTAATTTATATTTTTTTTTTGAAAACTTATTTGTCTACTTAAATAGAATTTAAAATATTAATTATAAATTTTTTGAAAATTTACTTGTGATTTGTGCATAATTTTGATGTATTCTATTAAGTACTACTATTTATTATACCAATTTCAATACTAAATGTTGAAATATAGTAGTGGAAGTTGTACATTTAACATCTAAAAAGTATAAAAGTTCATTTTCTCAATGTAAAATTTATTTTTCATTTCCTTTTTTAGTTCTTAACTTGTGCCTTAGGACACAAGTTAGCACGACCCTTAGAAAAAATTGAGGTAACAGTAAAGATATGTTACCTACCCTTTTTACTCTAAGTTCAGTTGCCTCTAAAAAAAACTCCCTTAACATTAAATCCATTCAAAAACTACATAACATTAAATTAAATGCTAATACAAATATATACTCCAAAATATAAAGAAATTTACTTATAATTATATTGCATTATGGTGGCAGTTCATACAATTCATTCAAGCTTATATGACTGAGGCCAGATGGTTAAACAATAATTATATACCAACATTGGAAGAGTACATTCACCTATCAACAGAAACATGTGGTTACACATTGTTGATATGTACCAGTTTCATTGGTATGGGAGACATAACCACAGAGGAGATCATCAAGTGGGTATCAAATGAAACAAAAATGGTTAATGCTGCTATTGTTATTGGCAGGATAATGGATGATATTGCGTCCAATGAGGTATAAATATAAAATTTTAATCTTTTCTTCAATGTCTTTGTTTTAAGGGTCATGCTAACCGGTACCCCGTGCACTCGTTAAGCATACAAAAAAAGAAAATTATTATCATAAAAGGAAACTGTTTTTGACTTTTTATAAATTAATTACACAATTTCAATGTATTAACTACTATATAATTTTCTTTTTAGTATGCTTAACCAGTGCTCCAGAGGCACCGATTAGCATTTCCCTTGTTTTAATTCAATGTAAACATTTACGTGAATTATTATTCGTTGTATATAGTTTGAACAGAAAAGAGAACATATGTCCTCATTCTTGGAATGCTATATGAAGAAGTATAATGTCTCTAGGGAAGCTTCAATTCAAGAAGGTAGAAAGAGGATTGCCAATGCTTGGAAAGATATGAATAAGGAATGTCTTAGGCCAACGGAAATTCCAATGCCTTTTCTTACACGTATTTTAAACCTCTCACGTGTTATTGATGTGTTTTATAAAGATGAAGATAATTACACGAATCCTGAAGGGGAAATGAAAACATTCATTAAAGCTTTGCTTGTAGATCCAGTGGTGGTTTGA
Protein sequence

>MS.gene35872.t1

MASKSDLHRNVADYKPSVWGDYFLRYASESMEVDQSIEAQIETLKNNVRDMLVSKTENPLEKVHLIDSICRLGVSYHFENEIEEVLQHIHKNYVENGEITIFEDNLCSLAVLFRLLRQQGLHVSPNVFNKFKDEQGKFSKIIIVDVEGMLSLYEATHLMVRGEDILEEALAFSTTHLDFVANESSHPRAIQVKHSLRQALHKNLPRWWKELDAANKLPFARDRMVEGSFWAMGLFFEPQYSIGRKFMSKLIIIITAIDDAYDAYGTIDELELFTKAIERWDISCLDDLPDYMKFLYRITLDLYEEIEQEMQKSGRAYAINYYRKAFIQFIQAYMTEARWLNNNYIPTLEEYIHLSTETCGYTLLICTSFIGMGDITTEEIIKWVSNETKMVNAAIVIGRIMDDIASNEFEQKREHMSSFLECYMKKYNVSREASIQEGRKRIANAWKDMNKECLRPTEIPMPFLTRILNLSRVIDVFYKDEDNYTNPEGEMKTFIKALLVDPVVV