Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40783.t1 | XP_013469069.1 | 97.6 | 419 | 10 | 0 | 1 | 419 | 44 | 462 | 2.50E-222 | 781.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40783.t1 | Q9H6T3 | 39.1 | 138 | 74 | 3 | 52 | 179 | 137 | 274 | 1.5e-15 | 85.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40783.t1 | A0A072VMN4 | 97.6 | 419 | 10 | 0 | 1 | 419 | 44 | 462 | 1.8e-222 | 781.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene40783 | MS.gene30654 | PPI |
| MS.gene40783 | MS.gene040499 | PPI |
| MS.gene40783 | MS.gene62607 | PPI |
| MS.gene40783 | MS.gene60613 | PPI |
| MS.gene40783 | MS.gene061126 | PPI |
| MS.gene40783 | MS.gene49154 | PPI |
| MS.gene40783 | MS.gene006231 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40783.t1 | MTR_1g084100 | 97.613 | 419 | 10 | 0 | 1 | 419 | 44 | 462 | 0.0 | 848 |
| MS.gene40783.t1 | MTR_8g107280 | 42.424 | 99 | 56 | 1 | 52 | 149 | 483 | 581 | 1.11e-18 | 88.6 |
| MS.gene40783.t1 | MTR_4g094205 | 44.444 | 99 | 54 | 1 | 52 | 149 | 492 | 590 | 1.71e-17 | 85.1 |
| MS.gene40783.t1 | MTR_3g452710 | 39.286 | 112 | 67 | 1 | 44 | 154 | 7 | 118 | 1.18e-15 | 79.3 |
| MS.gene40783.t1 | MTR_3g452710 | 39.286 | 112 | 67 | 1 | 44 | 154 | 7 | 118 | 1.77e-15 | 78.6 |
| MS.gene40783.t1 | MTR_2g078020 | 28.485 | 165 | 108 | 3 | 55 | 218 | 469 | 624 | 4.14e-12 | 68.6 |
| MS.gene40783.t1 | MTR_2g078020 | 28.485 | 165 | 108 | 3 | 55 | 218 | 469 | 624 | 5.46e-12 | 68.2 |
| MS.gene40783.t1 | MTR_1g030300 | 37.615 | 109 | 64 | 3 | 48 | 153 | 181 | 288 | 7.14e-12 | 67.4 |
| MS.gene40783.t1 | MTR_3g087480 | 33.929 | 112 | 73 | 1 | 55 | 165 | 463 | 574 | 7.23e-12 | 67.4 |
| MS.gene40783.t1 | MTR_3g074230 | 33.628 | 113 | 68 | 2 | 55 | 166 | 431 | 537 | 5.39e-11 | 65.1 |
| MS.gene40783.t1 | MTR_3g074230 | 33.094 | 139 | 70 | 2 | 20 | 135 | 141 | 279 | 7.74e-11 | 64.3 |
| MS.gene40783.t1 | MTR_3g074230 | 33.628 | 113 | 68 | 2 | 55 | 166 | 431 | 537 | 5.48e-11 | 65.1 |
| MS.gene40783.t1 | MTR_3g074230 | 33.094 | 139 | 70 | 2 | 20 | 135 | 141 | 279 | 7.01e-11 | 64.7 |
| MS.gene40783.t1 | MTR_5g012030 | 33.333 | 105 | 69 | 1 | 48 | 151 | 392 | 496 | 7.91e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40783.t1 | AT1G56440 | 52.113 | 426 | 172 | 6 | 21 | 420 | 47 | 466 | 5.06e-143 | 416 |
| MS.gene40783.t1 | AT1G56440 | 52.113 | 426 | 172 | 6 | 21 | 420 | 57 | 476 | 1.36e-142 | 415 |
| MS.gene40783.t1 | AT3G17970 | 44.643 | 112 | 59 | 2 | 39 | 149 | 467 | 576 | 8.88e-21 | 95.1 |
| MS.gene40783.t1 | AT5G09420 | 41.176 | 102 | 59 | 1 | 52 | 152 | 492 | 593 | 2.45e-16 | 81.6 |
| MS.gene40783.t1 | AT2G42810 | 39.286 | 112 | 67 | 1 | 44 | 154 | 9 | 120 | 9.95e-16 | 79.7 |
| MS.gene40783.t1 | AT2G42810 | 39.286 | 112 | 67 | 1 | 44 | 154 | 9 | 120 | 1.08e-15 | 79.3 |
| MS.gene40783.t1 | AT2G42810 | 39.286 | 112 | 67 | 1 | 44 | 154 | 9 | 120 | 1.49e-15 | 79.0 |
| MS.gene40783.t1 | AT2G42810 | 39.286 | 112 | 67 | 1 | 44 | 154 | 9 | 120 | 1.49e-15 | 79.0 |
| MS.gene40783.t1 | AT2G42810 | 39.286 | 112 | 67 | 1 | 44 | 154 | 9 | 120 | 1.49e-15 | 79.0 |
| MS.gene40783.t1 | AT2G42580 | 30.968 | 155 | 101 | 2 | 55 | 203 | 465 | 619 | 8.10e-12 | 67.8 |
| MS.gene40783.t1 | AT3G58620 | 28.144 | 167 | 114 | 2 | 44 | 204 | 445 | 611 | 9.33e-12 | 67.4 |
| MS.gene40783.t1 | AT3G58620 | 28.144 | 167 | 114 | 2 | 44 | 204 | 445 | 611 | 1.17e-11 | 67.0 |
| MS.gene40783.t1 | AT1G12270 | 31.343 | 134 | 82 | 2 | 28 | 151 | 354 | 487 | 3.67e-11 | 65.5 |
| MS.gene40783.t1 | AT4G12400 | 32.331 | 133 | 80 | 3 | 28 | 150 | 340 | 472 | 4.50e-11 | 65.1 |
| MS.gene40783.t1 | AT4G12400 | 32.331 | 133 | 80 | 3 | 28 | 150 | 340 | 472 | 5.08e-11 | 65.1 |
Find 80 sgRNAs with CRISPR-Local
Find 338 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAACAGATGCTTTCATTTC+CGG | 0.172259 | 1.2:-59411736 | None:intergenic |
| TTCTGGTGATCTTGCTTTGC+AGG | 0.179423 | 1.2:+59411861 | MS.gene40783:CDS |
| TTTCAAACAGAAGAAGTTTA+AGG | 0.181327 | 1.2:+59409294 | MS.gene40783:CDS |
| CTTGCCTTCTTAGCTTTATA+TGG | 0.195569 | 1.2:-59409390 | None:intergenic |
| TTTGCAGGCTTGTCTATTAA+AGG | 0.222918 | 1.2:+59411876 | MS.gene40783:CDS |
| GATGGAGTATGCTGAGATTT+TGG | 0.222982 | 1.2:+59413532 | MS.gene40783:CDS |
| GTAACGATCATCGAGATTTA+AGG | 0.265093 | 1.2:-59409648 | None:intergenic |
| CTGCTGTAGCCTATGCAAAT+AGG | 0.267162 | 1.2:+59409359 | MS.gene40783:CDS |
| TTCTTGACTTCTTGATTGTT+AGG | 0.278082 | 1.2:-59409866 | None:intergenic |
| GGATCTAGTTGTTAGTTATA+TGG | 0.278767 | 1.2:+59412201 | MS.gene40783:CDS |
| TACAGTGTTTCTTAGCGCTT+TGG | 0.334211 | 1.2:-59411067 | None:intergenic |
| AAGTCCGAGACAAAAGTTAA+TGG | 0.348282 | 1.2:+59411102 | MS.gene40783:CDS |
| TGCTAAAGAACCACTCTTGA+TGG | 0.363324 | 1.2:+59411353 | MS.gene40783:CDS |
| CTTATCAGTTTGAGGTCTCT+TGG | 0.365519 | 1.2:+59411830 | MS.gene40783:CDS |
| TGCTGTAGCCTATGCAAATA+GGG | 0.377706 | 1.2:+59409360 | MS.gene40783:CDS |
| CTGCAGATTTGCGCAAGATC+TGG | 0.380066 | 1.2:+59413480 | MS.gene40783:intron |
| ACTAGTAGGAAATGGTTCTA+AGG | 0.403610 | 1.2:+59411422 | MS.gene40783:CDS |
| TGAAGCTCATCGTCAAATAA+AGG | 0.403993 | 1.2:+59411176 | MS.gene40783:CDS |
| TTGCCTTCTTAGCTTTATAT+GGG | 0.409244 | 1.2:-59409389 | None:intergenic |
| AACTACAGCTTATCAGTTTG+AGG | 0.411492 | 1.2:+59411822 | MS.gene40783:CDS |
| ATCAAGAGTGGTTCTTTAGC+AGG | 0.431104 | 1.2:-59411351 | None:intergenic |
| TGCAAGCCACAGCTTGGAAC+AGG | 0.445688 | 1.2:+59411455 | MS.gene40783:CDS |
| AAGCTATTGATTGCTATTCA+AGG | 0.460436 | 1.2:+59409317 | MS.gene40783:CDS |
| CGATCAATGGGTGTGGAGAA+TGG | 0.466470 | 1.2:+59408850 | None:intergenic |
| ACTCAAGGACTAGTAGGAAA+TGG | 0.489220 | 1.2:+59411414 | MS.gene40783:CDS |
| TCTTTCTCAGAAGCAGCATC+AGG | 0.489375 | 1.2:-59408991 | None:intergenic |
| AACTAGCAGGGTAGAAGATA+AGG | 0.492686 | 1.2:-59412054 | None:intergenic |
| AGTTTGAGGTCTCTTGGAGA+GGG | 0.494603 | 1.2:+59411836 | MS.gene40783:CDS |
| GTTCTTTGCAGCTTCAGCCA+TGG | 0.504037 | 1.2:-59411788 | None:intergenic |
| GTGCCTTCCATCAGCTGCTA+AGG | 0.506136 | 1.2:+59412264 | MS.gene40783:CDS |
| TGCCGAGTTTGCCATGAGGT+TGG | 0.507363 | 1.2:+59409841 | MS.gene40783:CDS |
| CTGCGCTGAGGCAACTCCGA+TGG | 0.507557 | 1.2:+59413514 | MS.gene40783:CDS |
| CAGTTTGAGGTCTCTTGGAG+AGG | 0.513770 | 1.2:+59411835 | MS.gene40783:CDS |
| GATGGAGGAGATCACTAGTA+AGG | 0.515376 | 1.2:+59411371 | MS.gene40783:CDS |
| CACATCAAATCTCGGTACCT+TGG | 0.516448 | 1.2:-59412233 | None:intergenic |
| ACTTGATGATCTCAACTAGC+AGG | 0.517918 | 1.2:-59412067 | None:intergenic |
| TCAAGCTGCTTCTCGAGCCA+TGG | 0.518342 | 1.2:+59411771 | MS.gene40783:CDS |
| ATTGTTAGGTTCCAACCTCA+TGG | 0.526662 | 1.2:-59409852 | None:intergenic |
| TGGCCCATATAAAGCTAAGA+AGG | 0.528942 | 1.2:+59409386 | MS.gene40783:CDS |
| GAGTCGTGTGAGTAGCAGTT+TGG | 0.530179 | 1.2:+59408954 | MS.gene40783:CDS |
| GGTGTGGAGAATGGATCAAA+AGG | 0.534741 | 1.2:+59408859 | MS.gene40783:CDS |
| GAGAAATCATAAAACTAAGC+CGG | 0.536442 | 1.2:+59411717 | MS.gene40783:intron |
| AACTGATAAGCTGTAGTTGG+TGG | 0.540121 | 1.2:-59411817 | None:intergenic |
| ATACCATCCTTAGCAGCTGA+TGG | 0.542897 | 1.2:-59412271 | None:intergenic |
| GGCTACAGCAGTGGGTGAGA+AGG | 0.545729 | 1.2:-59409347 | None:intergenic |
| ATTTGACGATGAGCTTCAGT+TGG | 0.547813 | 1.2:-59411171 | None:intergenic |
| TTCCAACCTCATGGCAAACT+CGG | 0.550264 | 1.2:-59409843 | None:intergenic |
| AGCAGGACTCAAGGACTAGT+AGG | 0.551356 | 1.2:+59411408 | MS.gene40783:CDS |
| CTCCGATCAAAATTCTACCT+TGG | 0.554742 | 1.2:+59413560 | MS.gene40783:CDS |
| CAAGTGAGTGTCACTGTCCA+AGG | 0.558456 | 1.2:-59413577 | None:intergenic |
| CAGCAGATTTCAAGAGGCTG+AGG | 0.559168 | 1.2:+59409610 | MS.gene40783:intron |
| TCAAACTGATAAGCTGTAGT+TGG | 0.559212 | 1.2:-59411820 | None:intergenic |
| GTAGGAAATGGTTCTAAGGA+AGG | 0.565761 | 1.2:+59411426 | MS.gene40783:CDS |
| TTATAATGCAAGCCACAGCT+TGG | 0.565861 | 1.2:+59411449 | MS.gene40783:CDS |
| AGGATACAAAATCTGCAAGC+AGG | 0.568821 | 1.2:+59411391 | MS.gene40783:CDS |
| GAGTGATCGATCAATGGGTG+TGG | 0.570518 | 1.2:+59408843 | None:intergenic |
| GCTTAACCTGTTCCAAGCTG+TGG | 0.570744 | 1.2:-59411461 | None:intergenic |
| CATCCTTAGCAGCTGATGGA+AGG | 0.574291 | 1.2:-59412267 | None:intergenic |
| AAATCTGCAAGCAGGACTCA+AGG | 0.576402 | 1.2:+59411399 | MS.gene40783:CDS |
| GCAACGGCTAGAAAAGAACT+TGG | 0.576648 | 1.2:+59409692 | MS.gene40783:CDS |
| CTTCCATCAGCTGCTAAGGA+TGG | 0.577022 | 1.2:+59412268 | MS.gene40783:CDS |
| GGCCATTGCCCTATTTGCAT+AGG | 0.577379 | 1.2:-59409368 | None:intergenic |
| CTCGTACAGTGACTTAGCAT+CGG | 0.584635 | 1.2:-59409897 | None:intergenic |
| ATTATGATCACATCAAATCT+CGG | 0.587514 | 1.2:-59412241 | None:intergenic |
| AGCATACTCTCGGCGAGCAA+CGG | 0.597287 | 1.2:+59409676 | MS.gene40783:CDS |
| ATGTGTCAGCAGATTTCAAG+AGG | 0.608715 | 1.2:+59409604 | MS.gene40783:intron |
| TTTGCATAGGCTACAGCAGT+GGG | 0.613483 | 1.2:-59409355 | None:intergenic |
| AGCCTATGCAAATAGGGCAA+TGG | 0.619385 | 1.2:+59409366 | MS.gene40783:CDS |
| AAAATCTCAGCATACTCCAT+CGG | 0.624335 | 1.2:-59413530 | None:intergenic |
| TGCTGCTTCTGAGAAAGACC+TGG | 0.631182 | 1.2:+59408996 | MS.gene40783:CDS |
| GTTACATCAAAGCATACTCT+CGG | 0.631423 | 1.2:+59409666 | MS.gene40783:CDS |
| TGCTAAGTCACTGTACGAGA+AGG | 0.634474 | 1.2:+59409901 | MS.gene40783:CDS |
| TAGTACTATGTGAAACAGAG+TGG | 0.636916 | 1.2:-59411137 | None:intergenic |
| CTTGATGATCTCAACTAGCA+GGG | 0.642984 | 1.2:-59412066 | None:intergenic |
| ATTTGCATAGGCTACAGCAG+TGG | 0.647481 | 1.2:-59409356 | None:intergenic |
| GTGATCTCCTCCATCAAGAG+TGG | 0.650649 | 1.2:-59411363 | None:intergenic |
| TTATATGGATAATTTAACCA+AGG | 0.659529 | 1.2:+59412216 | MS.gene40783:CDS |
| TAAAGAACCACTCTTGATGG+AGG | 0.671168 | 1.2:+59411356 | MS.gene40783:CDS |
| GGCTGAGGATGACTGTACAG+AGG | 0.702052 | 1.2:+59409625 | MS.gene40783:CDS |
| CAGATGCCGAGTTTGCCATG+AGG | 0.707223 | 1.2:+59409837 | MS.gene40783:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAAATTTTCACTAAATTA+TGG | + | chr1.2:59409448-59409467 | MS.gene40783:intron | 10.0% |
| !! | AAGAAAAAGTAAACTTATTT+CGG | - | chr1.2:59413318-59413337 | None:intergenic | 15.0% |
| !! | TAGCAATAATAAATAGATTA+TGG | + | chr1.2:59409196-59409215 | MS.gene40783:intron | 15.0% |
| !!! | TTCTATTTTAATAGCTATAT+AGG | + | chr1.2:59409994-59410013 | MS.gene40783:intron | 15.0% |
| !! | AAAAATAAAGAATCAATGGA+GGG | + | chr1.2:59409716-59409735 | MS.gene40783:CDS | 20.0% |
| !! | AAACAAAAAGGGAAATAAAT+GGG | + | chr1.2:59410793-59410812 | MS.gene40783:intron | 20.0% |
| !! | AATAAATACTTACGCAAAAA+AGG | - | chr1.2:59412102-59412121 | None:intergenic | 20.0% |
| !! | CTTTAAATCACCTTAAAAAT+TGG | + | chr1.2:59410760-59410779 | MS.gene40783:intron | 20.0% |
| !! | GGTGATTTAAAGAATTTATA+CGG | - | chr1.2:59410752-59410771 | None:intergenic | 20.0% |
| !! | TTATATGGATAATTTAACCA+AGG | + | chr1.2:59412216-59412235 | MS.gene40783:CDS | 20.0% |
| !! | TTTAAATTCTGCAAAAAGAT+AGG | - | chr1.2:59412482-59412501 | None:intergenic | 20.0% |
| !! | TTTAGAAGCAAAACTTATTT+AGG | + | chr1.2:59411548-59411567 | MS.gene40783:intron | 20.0% |
| !!! | AAGGCATTTTTGAATATTTT+CGG | - | chr1.2:59412038-59412057 | None:intergenic | 20.0% |
| !!! | AGAAACAATTTTTTTATCCA+CGG | - | chr1.2:59412762-59412781 | None:intergenic | 20.0% |
| !!! | GAAATCTTTTGAAAGTTTAA+AGG | + | chr1.2:59412351-59412370 | MS.gene40783:intron | 20.0% |
| !!! | GGTATGTATGTTTTTTATTA+GGG | + | chr1.2:59412289-59412308 | MS.gene40783:intron | 20.0% |
| !!! | GTATGTATGTTTTTTATTAG+GGG | + | chr1.2:59412290-59412309 | MS.gene40783:intron | 20.0% |
| !!! | TAGATATATTGTTATTTCCA+TGG | + | chr1.2:59411232-59411251 | MS.gene40783:intron | 20.0% |
| !!! | TATTATATTGCTGTGATTTT+AGG | + | chr1.2:59411605-59411624 | MS.gene40783:intron | 20.0% |
| !!! | TGGTATGTATGTTTTTTATT+AGG | + | chr1.2:59412288-59412307 | MS.gene40783:intron | 20.0% |
| !!! | TTTACTTGAGTTTTAATTCA+GGG | - | chr1.2:59412553-59412572 | None:intergenic | 20.0% |
| ! | AAAACTACTTTCTGATCTTT+AGG | - | chr1.2:59409493-59409512 | None:intergenic | 25.0% |
| ! | AAACTGATGTTTAACAACAT+TGG | + | chr1.2:59410308-59410327 | MS.gene40783:intron | 25.0% |
| ! | AAATCACCTTAAAAATTGGA+GGG | + | chr1.2:59410764-59410783 | MS.gene40783:intron | 25.0% |
| ! | AACAAAAAGGGAAATAAATG+GGG | + | chr1.2:59410794-59410813 | MS.gene40783:intron | 25.0% |
| ! | AACAGAAGACTTCAAAATTA+AGG | - | chr1.2:59410464-59410483 | None:intergenic | 25.0% |
| ! | ACACCAAAAATATGTAAAAC+AGG | - | chr1.2:59411684-59411703 | None:intergenic | 25.0% |
| ! | AGATGTAAGATTACTTTGTT+TGG | + | chr1.2:59411262-59411281 | MS.gene40783:intron | 25.0% |
| ! | AGTGATATATACTAGTCATA+AGG | + | chr1.2:59410433-59410452 | MS.gene40783:intron | 25.0% |
| ! | ATGTGGTAATTAAGTAATGA+GGG | - | chr1.2:59413222-59413241 | None:intergenic | 25.0% |
| ! | ATTATGATCACATCAAATCT+CGG | - | chr1.2:59412244-59412263 | None:intergenic | 25.0% |
| ! | CAAAAATAAAGAATCAATGG+AGG | + | chr1.2:59409715-59409734 | MS.gene40783:CDS | 25.0% |
| ! | CAAACAAAAAGGGAAATAAA+TGG | + | chr1.2:59410792-59410811 | MS.gene40783:intron | 25.0% |
| ! | CTAAAGAAATGATATTGAGT+GGG | + | chr1.2:59409126-59409145 | MS.gene40783:intron | 25.0% |
| ! | GTGATATATACTAGTCATAA+GGG | + | chr1.2:59410434-59410453 | MS.gene40783:intron | 25.0% |
| ! | TAAATCACCTTAAAAATTGG+AGG | + | chr1.2:59410763-59410782 | MS.gene40783:intron | 25.0% |
| ! | TCAAAAGATTTCAAAAAGTG+TGG | - | chr1.2:59412343-59412362 | None:intergenic | 25.0% |
| ! | TCACAGCAATATAATAAAAC+TGG | - | chr1.2:59411601-59411620 | None:intergenic | 25.0% |
| ! | TCTAAAGAAATGATATTGAG+TGG | + | chr1.2:59409125-59409144 | MS.gene40783:intron | 25.0% |
| ! | TGCTAAAATAATGATCTGTT+GGG | - | chr1.2:59409181-59409200 | None:intergenic | 25.0% |
| ! | TGGCAAAAATAAAGAATCAA+TGG | + | chr1.2:59409712-59409731 | MS.gene40783:CDS | 25.0% |
| ! | TTAAAACAAAAGATGTAACG+AGG | + | chr1.2:59412984-59413003 | MS.gene40783:intron | 25.0% |
| ! | TTATCCAACCAATCAAATTT+GGG | + | chr1.2:59412613-59412632 | MS.gene40783:intron | 25.0% |
| ! | TTGCTAAAATAATGATCTGT+TGG | - | chr1.2:59409182-59409201 | None:intergenic | 25.0% |
| ! | TTTATCCAACCAATCAAATT+TGG | + | chr1.2:59412612-59412631 | MS.gene40783:intron | 25.0% |
| ! | TTTCAAACAGAAGAAGTTTA+AGG | + | chr1.2:59409294-59409313 | MS.gene40783:CDS | 25.0% |
| !! | AATATTTTCGGTAATTCATG+GGG | - | chr1.2:59412026-59412045 | None:intergenic | 25.0% |
| !! | AATTTGTTCATTCGAAACTT+TGG | - | chr1.2:59410611-59410630 | None:intergenic | 25.0% |
| !! | ATAAAACTGGCAAAAGTTTT+AGG | - | chr1.2:59411588-59411607 | None:intergenic | 25.0% |
| !! | ATGTTGTTAAACATCAGTTT+TGG | - | chr1.2:59410308-59410327 | None:intergenic | 25.0% |
| !! | GAATATTTTCGGTAATTCAT+GGG | - | chr1.2:59412027-59412046 | None:intergenic | 25.0% |
| !! | TAAAACTGGCAAAAGTTTTA+GGG | - | chr1.2:59411587-59411606 | None:intergenic | 25.0% |
| !! | TGAATATTTTCGGTAATTCA+TGG | - | chr1.2:59412028-59412047 | None:intergenic | 25.0% |
| !! | TGGCGCAAAATTTAAATTTT+AGG | + | chr1.2:59410053-59410072 | MS.gene40783:intron | 25.0% |
| !! | TGTCCTGTTTTACATATTTT+TGG | + | chr1.2:59411678-59411697 | MS.gene40783:intron | 25.0% |
| !! | TTGATTGGTTGGATAAAATA+TGG | - | chr1.2:59412609-59412628 | None:intergenic | 25.0% |
| !! | TTGGTTTAGAGGAATATTTT+GGG | + | chr1.2:59410327-59410346 | MS.gene40783:intron | 25.0% |
| !!! | AAACAATTTTTTTATCCACG+GGG | - | chr1.2:59412760-59412779 | None:intergenic | 25.0% |
| !!! | ATTGGTTTAGAGGAATATTT+TGG | + | chr1.2:59410326-59410345 | MS.gene40783:intron | 25.0% |
| !!! | GAAACAATTTTTTTATCCAC+GGG | - | chr1.2:59412761-59412780 | None:intergenic | 25.0% |
| !!! | GAAGTTTTAAAGTAAAAGCA+CGG | + | chr1.2:59412941-59412960 | MS.gene40783:intron | 25.0% |
| !!! | GGAACATAACATTTAACTTT+TGG | + | chr1.2:59413266-59413285 | MS.gene40783:intron | 25.0% |
| !!! | GTTTACTTGAGTTTTAATTC+AGG | - | chr1.2:59412554-59412573 | None:intergenic | 25.0% |
| !!! | TCTATTTTTGTTTTCGTGTT+AGG | + | chr1.2:59411992-59412011 | MS.gene40783:intron | 25.0% |
| !!! | TGATAACGAATTTTCTCTTT+TGG | + | chr1.2:59412166-59412185 | MS.gene40783:intron | 25.0% |
| !!! | TTATTTGGCTCTCTTTTTTT+TGG | + | chr1.2:59413401-59413420 | MS.gene40783:intron | 25.0% |
| AACGAGGACAGAATATAAAT+TGG | + | chr1.2:59413000-59413019 | MS.gene40783:intron | 30.0% | |
| AAGAAACACTGTAGAAAAAG+TGG | + | chr1.2:59411077-59411096 | MS.gene40783:CDS | 30.0% | |
| AAGTCAAACAATATCAGACA+AGG | - | chr1.2:59413086-59413105 | None:intergenic | 30.0% | |
| AATCACCTTAAAAATTGGAG+GGG | + | chr1.2:59410765-59410784 | MS.gene40783:intron | 30.0% | |
| ACGAGGACAGAATATAAATT+GGG | + | chr1.2:59413001-59413020 | MS.gene40783:intron | 30.0% | |
| ACTTACTGTCATGTGTTAAT+TGG | + | chr1.2:59409515-59409534 | MS.gene40783:intron | 30.0% | |
| AGAAACACTGTAGAAAAAGT+GGG | + | chr1.2:59411078-59411097 | MS.gene40783:CDS | 30.0% | |
| AGGTTTCATGAAACATGTTT+AGG | + | chr1.2:59412371-59412390 | MS.gene40783:intron | 30.0% | |
| AGTATCAACATAATCAAACC+CGG | - | chr1.2:59411307-59411326 | None:intergenic | 30.0% | |
| ATGACTATAATAAGCCAAAC+CGG | + | chr1.2:59412877-59412896 | MS.gene40783:intron | 30.0% | |
| ATGCTTTATGTAGAATTTCC+TGG | - | chr1.2:59411047-59411066 | None:intergenic | 30.0% | |
| ATGTAAAACAGGACAATGAA+CGG | - | chr1.2:59411673-59411692 | None:intergenic | 30.0% | |
| ATTACCCTGTAATATACAGA+TGG | - | chr1.2:59409269-59409288 | None:intergenic | 30.0% | |
| ATTATTACATGACTACTGGA+AGG | + | chr1.2:59409946-59409965 | MS.gene40783:intron | 30.0% | |
| ATTGTGCATCCTTATCAATA+AGG | + | chr1.2:59413143-59413162 | MS.gene40783:intron | 30.0% | |
| CAAAATGTGTAATATCTTCC+TGG | + | chr1.2:59412650-59412669 | MS.gene40783:intron | 30.0% | |
| CAATCCATCTGTATATTACA+GGG | + | chr1.2:59409262-59409281 | MS.gene40783:intron | 30.0% | |
| CACATAGTACTAAAAAGTCA+GGG | + | chr1.2:59411148-59411167 | MS.gene40783:CDS | 30.0% | |
| CATGTGGTAATTAAGTAATG+AGG | - | chr1.2:59413223-59413242 | None:intergenic | 30.0% | |
| CATTCTTTCCCAAATTTGAT+TGG | - | chr1.2:59412624-59412643 | None:intergenic | 30.0% | |
| CTGTATTATTACATGACTAC+TGG | + | chr1.2:59409942-59409961 | MS.gene40783:intron | 30.0% | |
| CTTAGATTTAGTAGTTAGGA+TGG | + | chr1.2:59410166-59410185 | MS.gene40783:intron | 30.0% | |
| GAGAAATCATAAAACTAAGC+CGG | + | chr1.2:59411717-59411736 | MS.gene40783:intron | 30.0% | |
| GATGTCTTAAAGCAAGATTT+GGG | + | chr1.2:59410133-59410152 | MS.gene40783:intron | 30.0% | |
| GATTATGTTGATACTTGTCA+GGG | + | chr1.2:59411312-59411331 | MS.gene40783:intron | 30.0% | |
| GGAAATAAATGGGGATTTAA+TGG | + | chr1.2:59410803-59410822 | MS.gene40783:intron | 30.0% | |
| GGATCTAGTTGTTAGTTATA+TGG | + | chr1.2:59412201-59412220 | MS.gene40783:CDS | 30.0% | |
| GTGAAAACAACTTTGTAACT+AGG | - | chr1.2:59412805-59412824 | None:intergenic | 30.0% | |
| TCAATCCATCTGTATATTAC+AGG | + | chr1.2:59409261-59409280 | MS.gene40783:intron | 30.0% | |
| TCACATAGTACTAAAAAGTC+AGG | + | chr1.2:59411147-59411166 | MS.gene40783:CDS | 30.0% | |
| TCCTACAGCAAATATATACA+AGG | - | chr1.2:59412827-59412846 | None:intergenic | 30.0% | |
| TGAATGAATGACACATTTCT+TGG | + | chr1.2:59412913-59412932 | MS.gene40783:intron | 30.0% | |
| TGATGTCTTAAAGCAAGATT+TGG | + | chr1.2:59410132-59410151 | MS.gene40783:intron | 30.0% | |
| TGATTATGTTGATACTTGTC+AGG | + | chr1.2:59411311-59411330 | MS.gene40783:intron | 30.0% | |
| TGTATGCAATTATGTACTGA+TGG | - | chr1.2:59410084-59410103 | None:intergenic | 30.0% | |
| TTAGAGCCATGTTACATAAA+GGG | - | chr1.2:59409110-59409129 | None:intergenic | 30.0% | |
| TTCTTGACTTCTTGATTGTT+AGG | - | chr1.2:59409869-59409888 | None:intergenic | 30.0% | |
| ! | AAAGCAAGATTTGGGATTAA+AGG | + | chr1.2:59410141-59410160 | MS.gene40783:intron | 30.0% |
| ! | AACTCAAGTAAACTCAGTTT+TGG | + | chr1.2:59412561-59412580 | MS.gene40783:intron | 30.0% |
| ! | AAGCAAGATTTGGGATTAAA+GGG | + | chr1.2:59410142-59410161 | MS.gene40783:intron | 30.0% |
| ! | AAGCTATTGATTGCTATTCA+AGG | + | chr1.2:59409317-59409336 | MS.gene40783:CDS | 30.0% |
| ! | ATTTTTACAAGACAATAGGG+AGG | + | chr1.2:59413025-59413044 | MS.gene40783:intron | 30.0% |
| ! | CAGAAGTACAGCATATATAA+TGG | - | chr1.2:59411953-59411972 | None:intergenic | 30.0% |
| ! | CATTAGAAAGACTTTAGAGA+CGG | + | chr1.2:59410204-59410223 | MS.gene40783:intron | 30.0% |
| ! | GGATTGTTAGGATCTATTTT+AGG | + | chr1.2:59410557-59410576 | MS.gene40783:intron | 30.0% |
| ! | GGGATTTTTACAAGACAATA+GGG | + | chr1.2:59413022-59413041 | MS.gene40783:intron | 30.0% |
| ! | GTATATATCACTCGTTTTCA+TGG | - | chr1.2:59410425-59410444 | None:intergenic | 30.0% |
| ! | TTTAGAGCCATGTTACATAA+AGG | - | chr1.2:59409111-59409130 | None:intergenic | 30.0% |
| !! | AAAACTGGCAAAAGTTTTAG+GGG | - | chr1.2:59411586-59411605 | None:intergenic | 30.0% |
| !! | ACCTTGTATATATTTGCTGT+AGG | + | chr1.2:59412823-59412842 | MS.gene40783:intron | 30.0% |
| !! | CTTTTCATGCTGTTGTTATT+TGG | + | chr1.2:59413386-59413405 | MS.gene40783:intron | 30.0% |
| !! | GTTTAACAACATTGGTTTAG+AGG | + | chr1.2:59410316-59410335 | MS.gene40783:intron | 30.0% |
| !! | TTGCCTTCTTAGCTTTATAT+GGG | - | chr1.2:59409392-59409411 | None:intergenic | 30.0% |
| !!! | TTTTAAAGTTCCTTTTGTCC+AGG | + | chr1.2:59411026-59411045 | MS.gene40783:intron | 30.0% |
| AAAATCTCAGCATACTCCAT+CGG | - | chr1.2:59413533-59413552 | None:intergenic | 35.0% | |
| AAACTCGGCATCTGTAATTT+AGG | - | chr1.2:59409831-59409850 | None:intergenic | 35.0% | |
| AACAGAACCACAATACACAA+TGG | - | chr1.2:59411530-59411549 | None:intergenic | 35.0% | |
| AACAGCTCAATCCAATTAGA+TGG | - | chr1.2:59413452-59413471 | None:intergenic | 35.0% | |
| AACATGTTTAGGCTGAAGAA+AGG | + | chr1.2:59412382-59412401 | MS.gene40783:intron | 35.0% | |
| AACTACAGCTTATCAGTTTG+AGG | + | chr1.2:59411822-59411841 | MS.gene40783:CDS | 35.0% | |
| AACTCGGCATCTGTAATTTA+GGG | - | chr1.2:59409830-59409849 | None:intergenic | 35.0% | |
| AAGTCCGAGACAAAAGTTAA+TGG | + | chr1.2:59411102-59411121 | MS.gene40783:CDS | 35.0% | |
| AATATCTTCCTGGCAGTAAT+AGG | + | chr1.2:59412660-59412679 | MS.gene40783:intron | 35.0% | |
| AGAACAGTTAACAACACACT+AGG | - | chr1.2:59410956-59410975 | None:intergenic | 35.0% | |
| ATATTGAGTGGGAAATCAGA+TGG | + | chr1.2:59409137-59409156 | MS.gene40783:intron | 35.0% | |
| ATGACACTTACTTTATGACC+AGG | + | chr1.2:59410907-59410926 | MS.gene40783:intron | 35.0% | |
| CAAATTCAACAGAGTTCAAG+CGG | + | chr1.2:59410625-59410644 | MS.gene40783:intron | 35.0% | |
| CGAGGACAGAATATAAATTG+GGG | + | chr1.2:59413002-59413021 | MS.gene40783:intron | 35.0% | |
| CTTTCCCAAATTTGATTGGT+TGG | - | chr1.2:59412620-59412639 | None:intergenic | 35.0% | |
| GGAATGTCTTCATTTAACAC+TGG | - | chr1.2:59413051-59413070 | None:intergenic | 35.0% | |
| GTAACGATCATCGAGATTTA+AGG | - | chr1.2:59409651-59409670 | None:intergenic | 35.0% | |
| GTGAAACCCTTTATGTAACA+TGG | + | chr1.2:59409101-59409120 | MS.gene40783:intron | 35.0% | |
| GTTACATCAAAGCATACTCT+CGG | + | chr1.2:59409666-59409685 | MS.gene40783:CDS | 35.0% | |
| TAGTACTATGTGAAACAGAG+TGG | - | chr1.2:59411140-59411159 | None:intergenic | 35.0% | |
| TCAAACTGATAAGCTGTAGT+TGG | - | chr1.2:59411823-59411842 | None:intergenic | 35.0% | |
| TCAACAGATGCTTTCATTTC+CGG | - | chr1.2:59411739-59411758 | None:intergenic | 35.0% | |
| TGAAGCTCATCGTCAAATAA+AGG | + | chr1.2:59411176-59411195 | MS.gene40783:CDS | 35.0% | |
| TGTAAAACAGGACAATGAAC+GGG | - | chr1.2:59411672-59411691 | None:intergenic | 35.0% | |
| TGTAGAATTTCCTGGACAAA+AGG | - | chr1.2:59411039-59411058 | None:intergenic | 35.0% | |
| TGTAGTTCCATTGTGTATTG+TGG | + | chr1.2:59411520-59411539 | MS.gene40783:intron | 35.0% | |
| TTTGCAGGCTTGTCTATTAA+AGG | + | chr1.2:59411876-59411895 | MS.gene40783:CDS | 35.0% | |
| TTTGTAAGCAAGTCACTAAG+AGG | - | chr1.2:59413352-59413371 | None:intergenic | 35.0% | |
| ! | AAATTTTGCGCCAACTCTAA+CGG | - | chr1.2:59410046-59410065 | None:intergenic | 35.0% |
| ! | AACATATTTGCTGCTGGATA+AGG | + | chr1.2:59410677-59410696 | MS.gene40783:intron | 35.0% |
| ! | ACTAGTAGGAAATGGTTCTA+AGG | + | chr1.2:59411422-59411441 | MS.gene40783:CDS | 35.0% |
| ! | AGCAAGATTTGGGATTAAAG+GGG | + | chr1.2:59410143-59410162 | MS.gene40783:intron | 35.0% |
| ! | CTAGAAAACATATTTGCTGC+TGG | + | chr1.2:59410671-59410690 | MS.gene40783:intron | 35.0% |
| ! | GACATCAACTCGTTTGATTT+AGG | - | chr1.2:59410119-59410138 | None:intergenic | 35.0% |
| ! | GCTTCCATTAACTTTTGTCT+CGG | - | chr1.2:59411109-59411128 | None:intergenic | 35.0% |
| ! | GGGGATTTTTACAAGACAAT+AGG | + | chr1.2:59413021-59413040 | MS.gene40783:intron | 35.0% |
| ! | TTCCCTCTCCTAACTATTTT+GGG | + | chr1.2:59409030-59409049 | MS.gene40783:intron | 35.0% |
| ! | TTTCCCTCTCCTAACTATTT+TGG | + | chr1.2:59409029-59409048 | MS.gene40783:intron | 35.0% |
| !! | CAAGTAAACTCAGTTTTGGT+GGG | + | chr1.2:59412565-59412584 | MS.gene40783:intron | 35.0% |
| !! | CTTGCCTTCTTAGCTTTATA+TGG | - | chr1.2:59409393-59409412 | None:intergenic | 35.0% |
| !! | GTCCAAGGTAGAATTTTGAT+CGG | - | chr1.2:59413565-59413584 | None:intergenic | 35.0% |
| !! | GTGGGGCAAATTAATTTGTT+TGG | + | chr1.2:59409066-59409085 | MS.gene40783:intron | 35.0% |
| !! | TCAAGTAAACTCAGTTTTGG+TGG | + | chr1.2:59412564-59412583 | MS.gene40783:intron | 35.0% |
| !!! | CCTTATGGGGCAATTTTTTA+GGG | + | chr1.2:59410502-59410521 | MS.gene40783:intron | 35.0% |
| AACTAGCAGGGTAGAAGATA+AGG | - | chr1.2:59412057-59412076 | None:intergenic | 40.0% | |
| AACTGATAAGCTGTAGTTGG+TGG | - | chr1.2:59411820-59411839 | None:intergenic | 40.0% | |
| AAGCCCAAAATAGTTAGGAG+AGG | - | chr1.2:59409036-59409055 | None:intergenic | 40.0% | |
| AGAAGAGCTCCAACCAAAAT+TGG | + | chr1.2:59413180-59413199 | MS.gene40783:intron | 40.0% | |
| AGATCCTAACAATCCTTTCC+TGG | - | chr1.2:59410552-59410571 | None:intergenic | 40.0% | |
| AGCCCAAAATAGTTAGGAGA+GGG | - | chr1.2:59409035-59409054 | None:intergenic | 40.0% | |
| AGGATACAAAATCTGCAAGC+AGG | + | chr1.2:59411391-59411410 | MS.gene40783:CDS | 40.0% | |
| ATAATAAGCCAAACCGGTTG+TGG | + | chr1.2:59412883-59412902 | MS.gene40783:intron | 40.0% | |
| ATCAAGAGTGGTTCTTTAGC+AGG | - | chr1.2:59411354-59411373 | None:intergenic | 40.0% | |
| ATCTTCAGCATCACACAAGA+CGG | - | chr1.2:59409238-59409257 | None:intergenic | 40.0% | |
| ATGACTACTGGAAGGAAACA+TGG | + | chr1.2:59409954-59409973 | MS.gene40783:intron | 40.0% | |
| ATGGGGATTTAATGGTCTGT+TGG | + | chr1.2:59410811-59410830 | MS.gene40783:intron | 40.0% | |
| ATGTGTCAGCAGATTTCAAG+AGG | + | chr1.2:59409604-59409623 | MS.gene40783:intron | 40.0% | |
| ATTGTTAGGTTCCAACCTCA+TGG | - | chr1.2:59409855-59409874 | None:intergenic | 40.0% | |
| ATTTGACGATGAGCTTCAGT+TGG | - | chr1.2:59411174-59411193 | None:intergenic | 40.0% | |
| CAGACAAGGATGATATGTCA+TGG | - | chr1.2:59413072-59413091 | None:intergenic | 40.0% | |
| CCCTAAAAAATTGCCCCATA+AGG | - | chr1.2:59410505-59410524 | None:intergenic | 40.0% | |
| CTACCTCCATTATGGAGTTT+GGG | + | chr1.2:59412710-59412729 | MS.gene40783:intron | 40.0% | |
| CTCCGATCAAAATTCTACCT+TGG | + | chr1.2:59413560-59413579 | MS.gene40783:CDS | 40.0% | |
| CTGTTTGTCAGCATAGATTC+AGG | + | chr1.2:59410479-59410498 | MS.gene40783:intron | 40.0% | |
| CTTGAAATCTGCTGACACAT+AGG | - | chr1.2:59409604-59409623 | None:intergenic | 40.0% | |
| CTTTGTAACTAGGTAGTCAG+AGG | - | chr1.2:59412795-59412814 | None:intergenic | 40.0% | |
| GCTCTTTACGAGCATTAGTA+AGG | - | chr1.2:59409548-59409567 | None:intergenic | 40.0% | |
| GGGGCTTAGATTTAGTAGTT+AGG | + | chr1.2:59410162-59410181 | MS.gene40783:intron | 40.0% | |
| GGGTATATCAAAAGCCACTA+TGG | - | chr1.2:59410837-59410856 | None:intergenic | 40.0% | |
| GGGTTTGCAAGAAAATGCAT+CGG | + | chr1.2:59410702-59410721 | MS.gene40783:intron | 40.0% | |
| GTAAAACAGGACAATGAACG+GGG | - | chr1.2:59411671-59411690 | None:intergenic | 40.0% | |
| TAAAGAACCACTCTTGATGG+AGG | + | chr1.2:59411356-59411375 | MS.gene40783:CDS | 40.0% | |
| TACAGTGTTTCTTAGCGCTT+TGG | - | chr1.2:59411070-59411089 | None:intergenic | 40.0% | |
| TACGCAAGCCCAAAATAGTT+AGG | - | chr1.2:59409041-59409060 | None:intergenic | 40.0% | |
| TCCAATTAGATGGACAACTC+TGG | - | chr1.2:59413442-59413461 | None:intergenic | 40.0% | |
| TCTTACATCTGTCTCATCCA+TGG | - | chr1.2:59411252-59411271 | None:intergenic | 40.0% | |
| TGCTAAAGAACCACTCTTGA+TGG | + | chr1.2:59411353-59411372 | MS.gene40783:CDS | 40.0% | |
| TGCTGTAGCCTATGCAAATA+GGG | + | chr1.2:59409360-59409379 | MS.gene40783:CDS | 40.0% | |
| TGGCCCATATAAAGCTAAGA+AGG | + | chr1.2:59409386-59409405 | MS.gene40783:CDS | 40.0% | |
| TTATAATGCAAGCCACAGCT+TGG | + | chr1.2:59411449-59411468 | MS.gene40783:CDS | 40.0% | |
| TTCCTGGCAGTAATAGGAAA+AGG | + | chr1.2:59412666-59412685 | MS.gene40783:intron | 40.0% | |
| TTTATCCACGGGGAAAATGT+GGG | - | chr1.2:59412750-59412769 | None:intergenic | 40.0% | |
| TTTGCAAGAAAATGCATCGG+TGG | + | chr1.2:59410705-59410724 | MS.gene40783:intron | 40.0% | |
| ! | ACTCAAGGACTAGTAGGAAA+TGG | + | chr1.2:59411414-59411433 | MS.gene40783:CDS | 40.0% |
| ! | ACTTGATGATCTCAACTAGC+AGG | - | chr1.2:59412070-59412089 | None:intergenic | 40.0% |
| ! | AGCATAGATTCAGGCCTTAT+GGG | + | chr1.2:59410488-59410507 | MS.gene40783:intron | 40.0% |
| ! | AGCGGCTGACAGAATAATTT+TGG | + | chr1.2:59410643-59410662 | MS.gene40783:intron | 40.0% |
| ! | CGGCTGACAGAATAATTTTG+GGG | + | chr1.2:59410645-59410664 | MS.gene40783:intron | 40.0% |
| ! | CTTATCAGTTTGAGGTCTCT+TGG | + | chr1.2:59411830-59411849 | MS.gene40783:CDS | 40.0% |
| ! | CTTGATGATCTCAACTAGCA+GGG | - | chr1.2:59412069-59412088 | None:intergenic | 40.0% |
| ! | GATGGAGTATGCTGAGATTT+TGG | + | chr1.2:59413532-59413551 | MS.gene40783:CDS | 40.0% |
| ! | GCGGCTGACAGAATAATTTT+GGG | + | chr1.2:59410644-59410663 | MS.gene40783:intron | 40.0% |
| ! | TATTTGCTGCTGGATAAGGA+CGG | + | chr1.2:59410681-59410700 | MS.gene40783:intron | 40.0% |
| ! | TGTTTTTCCTCACTTCTCTC+TGG | + | chr1.2:59410989-59411008 | MS.gene40783:intron | 40.0% |
| ! | TTTTATCCACGGGGAAAATG+TGG | - | chr1.2:59412751-59412770 | None:intergenic | 40.0% |
| !! | AATGCTCGTAAAGAGCACTT+TGG | + | chr1.2:59409552-59409571 | MS.gene40783:intron | 40.0% |
| !! | CAAGGTAGAATTTTGATCGG+AGG | - | chr1.2:59413562-59413581 | None:intergenic | 40.0% |
| !! | GCCACGAGCATTGAAAATAA+GGG | + | chr1.2:59410016-59410035 | MS.gene40783:intron | 40.0% |
| !! | GTAGGAAATGGTTCTAAGGA+AGG | + | chr1.2:59411426-59411445 | MS.gene40783:CDS | 40.0% |
| !! | TATTTTGGGCTTGCGTAACA+GGG | + | chr1.2:59409044-59409063 | MS.gene40783:intron | 40.0% |
| !!! | GCCTTATGGGGCAATTTTTT+AGG | + | chr1.2:59410501-59410520 | MS.gene40783:intron | 40.0% |
| !!! | GGCAATTTTTTAGGGAAACC+TGG | + | chr1.2:59410510-59410529 | MS.gene40783:intron | 40.0% |
| !!! | TCCCTTATTTTCAATGCTCG+TGG | - | chr1.2:59410020-59410039 | None:intergenic | 40.0% |
| AAAGGTCAGCTGCAATGCAT+AGG | + | chr1.2:59412684-59412703 | MS.gene40783:intron | 45.0% | |
| AAATCTGCAAGCAGGACTCA+AGG | + | chr1.2:59411399-59411418 | MS.gene40783:CDS | 45.0% | |
| AACCTGCCCAAACTCCATAA+TGG | - | chr1.2:59412719-59412738 | None:intergenic | 45.0% | |
| AATCTGCTGACACATAGGTG+AGG | - | chr1.2:59409599-59409618 | None:intergenic | 45.0% | |
| AGCCTATGCAAATAGGGCAA+TGG | + | chr1.2:59409366-59409385 | MS.gene40783:CDS | 45.0% | |
| ATACCATCCTTAGCAGCTGA+TGG | - | chr1.2:59412274-59412293 | None:intergenic | 45.0% | |
| ATAGGTGGCTACCTCCATTA+TGG | + | chr1.2:59412702-59412721 | MS.gene40783:intron | 45.0% | |
| ATTTGCATAGGCTACAGCAG+TGG | - | chr1.2:59409359-59409378 | None:intergenic | 45.0% | |
| CACATCAAATCTCGGTACCT+TGG | - | chr1.2:59412236-59412255 | None:intergenic | 45.0% | |
| CACCTTAAAAATTGGAGGGG+CGG | + | chr1.2:59410768-59410787 | MS.gene40783:intron | 45.0% | |
| CAGCATAGATTCAGGCCTTA+TGG | + | chr1.2:59410487-59410506 | MS.gene40783:intron | 45.0% | |
| CATGCCAGGAAAGGATTGTT+AGG | + | chr1.2:59410545-59410564 | MS.gene40783:intron | 45.0% | |
| CATTCACCCATATCCACAAC+CGG | - | chr1.2:59412899-59412918 | None:intergenic | 45.0% | |
| CTCGTACAGTGACTTAGCAT+CGG | - | chr1.2:59409900-59409919 | None:intergenic | 45.0% | |
| CTGCTGTAGCCTATGCAAAT+AGG | + | chr1.2:59409359-59409378 | MS.gene40783:CDS | 45.0% | |
| CTGTCCTTCACAAATTGGTC+AGG | + | chr1.2:59410279-59410298 | MS.gene40783:intron | 45.0% | |
| GACCAATTTGTGAAGGACAG+TGG | - | chr1.2:59410279-59410298 | None:intergenic | 45.0% | |
| GATGGAGGAGATCACTAGTA+AGG | + | chr1.2:59411371-59411390 | MS.gene40783:CDS | 45.0% | |
| GCAACCTGACCAATTTGTGA+AGG | - | chr1.2:59410286-59410305 | None:intergenic | 45.0% | |
| GCAACGGCTAGAAAAGAACT+TGG | + | chr1.2:59409692-59409711 | MS.gene40783:CDS | 45.0% | |
| GCCAGAGTTGTCCATCTAAT+TGG | + | chr1.2:59413438-59413457 | MS.gene40783:intron | 45.0% | |
| GCTACCTCCATTATGGAGTT+TGG | + | chr1.2:59412709-59412728 | MS.gene40783:intron | 45.0% | |
| GCTGTACTTCTGCTGTTGAA+TGG | + | chr1.2:59411961-59411980 | MS.gene40783:intron | 45.0% | |
| GGTGTGGAGAATGGATCAAA+AGG | + | chr1.2:59408859-59408878 | MS.gene40783:CDS | 45.0% | |
| TAAGGGATGACCGTTAGAGT+TGG | + | chr1.2:59410033-59410052 | MS.gene40783:intron | 45.0% | |
| TAATGGTCTGTTGGCCATAG+TGG | + | chr1.2:59410820-59410839 | MS.gene40783:intron | 45.0% | |
| TACAAAGCTCATGCCAGGAA+AGG | + | chr1.2:59410536-59410555 | MS.gene40783:intron | 45.0% | |
| TCTTTCTCAGAAGCAGCATC+AGG | - | chr1.2:59408994-59409013 | None:intergenic | 45.0% | |
| TGCTAAGTCACTGTACGAGA+AGG | + | chr1.2:59409901-59409920 | MS.gene40783:CDS | 45.0% | |
| TGTTCGTCATGCATAGTGTC+CGG | + | chr1.2:59411285-59411304 | MS.gene40783:intron | 45.0% | |
| TTCCAACCTCATGGCAAACT+CGG | - | chr1.2:59409846-59409865 | None:intergenic | 45.0% | |
| TTCTGGTGATCTTGCTTTGC+AGG | + | chr1.2:59411861-59411880 | MS.gene40783:CDS | 45.0% | |
| TTGGTTGGAGCTCTTCTCAT+AGG | - | chr1.2:59413177-59413196 | None:intergenic | 45.0% | |
| TTTATGACCAGGCTTCACGA+CGG | + | chr1.2:59410918-59410937 | MS.gene40783:intron | 45.0% | |
| TTTGCATAGGCTACAGCAGT+GGG | - | chr1.2:59409358-59409377 | None:intergenic | 45.0% | |
| ! | AAAATTGGCCTGATAGGTGG+GGG | + | chr1.2:59413195-59413214 | MS.gene40783:intron | 45.0% |
| ! | AAGACTTTAGAGACGGAACG+AGG | + | chr1.2:59410211-59410230 | MS.gene40783:intron | 45.0% |
| ! | ACCAAAATTGGCCTGATAGG+TGG | + | chr1.2:59413192-59413211 | MS.gene40783:intron | 45.0% |
| ! | AGACTTTAGAGACGGAACGA+GGG | + | chr1.2:59410212-59410231 | MS.gene40783:intron | 45.0% |
| ! | AGTTTGAGGTCTCTTGGAGA+GGG | + | chr1.2:59411836-59411855 | MS.gene40783:CDS | 45.0% |
| ! | ATTTGCTGCTGGATAAGGAC+GGG | + | chr1.2:59410682-59410701 | MS.gene40783:intron | 45.0% |
| ! | CAAAATTGGCCTGATAGGTG+GGG | + | chr1.2:59413194-59413213 | MS.gene40783:intron | 45.0% |
| ! | CAGTGTTATTGATGCCGTCA+AGG | + | chr1.2:59410251-59410270 | MS.gene40783:intron | 45.0% |
| ! | CCAAAATTGGCCTGATAGGT+GGG | + | chr1.2:59413193-59413212 | MS.gene40783:intron | 45.0% |
| ! | CCAACCAAAATTGGCCTGAT+AGG | + | chr1.2:59413189-59413208 | MS.gene40783:intron | 45.0% |
| ! | GAATGAAGTTTTCTGCGCTG+AGG | + | chr1.2:59413502-59413521 | MS.gene40783:CDS | 45.0% |
| ! | GACCTTTTCCTATTACTGCC+AGG | - | chr1.2:59412671-59412690 | None:intergenic | 45.0% |
| ! | GCATAGATTCAGGCCTTATG+GGG | + | chr1.2:59410489-59410508 | MS.gene40783:intron | 45.0% |
| !! | CCTATCAGGCCAATTTTGGT+TGG | - | chr1.2:59413192-59413211 | None:intergenic | 45.0% |
| !! | CTATTTTGGGCTTGCGTAAC+AGG | + | chr1.2:59409043-59409062 | MS.gene40783:intron | 45.0% |
| !! | GCTCGAGAGCCTTATTGATA+AGG | - | chr1.2:59413155-59413174 | None:intergenic | 45.0% |
| !! | GGCCACGAGCATTGAAAATA+AGG | + | chr1.2:59410015-59410034 | MS.gene40783:intron | 45.0% |
| !! | GGTGGTGGAAAGAATTAGAG+TGG | + | chr1.2:59410723-59410742 | MS.gene40783:intron | 45.0% |
| ACAGGACAATGAACGGGGAT+AGG | - | chr1.2:59411666-59411685 | None:intergenic | 50.0% | |
| ACCCATATCCACAACCGGTT+TGG | - | chr1.2:59412894-59412913 | None:intergenic | 50.0% | |
| AGCCAAACCGGTTGTGGATA+TGG | + | chr1.2:59412889-59412908 | MS.gene40783:intron | 50.0% | |
| AGCCATTGCTGCCTGAATTG+AGG | - | chr1.2:59410869-59410888 | None:intergenic | 50.0% | |
| CAGCAGATTTCAAGAGGCTG+AGG | + | chr1.2:59409610-59409629 | MS.gene40783:intron | 50.0% | |
| CATCCTTAGCAGCTGATGGA+AGG | - | chr1.2:59412270-59412289 | None:intergenic | 50.0% | |
| CGCCACTGTCCTTCACAAAT+TGG | + | chr1.2:59410274-59410293 | MS.gene40783:intron | 50.0% | |
| CTCCATTATGGAGTTTGGGC+AGG | + | chr1.2:59412714-59412733 | MS.gene40783:intron | 50.0% | |
| CTGCAGATTTGCGCAAGATC+TGG | + | chr1.2:59413480-59413499 | MS.gene40783:intron | 50.0% | |
| CTGCCCAAACTCCATAATGG+AGG | - | chr1.2:59412716-59412735 | None:intergenic | 50.0% | |
| CTTCCATCAGCTGCTAAGGA+TGG | + | chr1.2:59412268-59412287 | MS.gene40783:CDS | 50.0% | |
| GAGGGAAAAAAGCTCCTACC+AGG | - | chr1.2:59409017-59409036 | None:intergenic | 50.0% | |
| GAGGGGCGGTCAAACAAAAA+GGG | + | chr1.2:59410782-59410801 | MS.gene40783:intron | 50.0% | |
| GAGTCGTGTGAGTAGCAGTT+TGG | + | chr1.2:59408954-59408973 | MS.gene40783:CDS | 50.0% | |
| GCCAAACCGGTTGTGGATAT+GGG | + | chr1.2:59412890-59412909 | MS.gene40783:intron | 50.0% | |
| GCCATTGCTGCCTGAATTGA+GGG | - | chr1.2:59410868-59410887 | None:intergenic | 50.0% | |
| GCTTAACCTGTTCCAAGCTG+TGG | - | chr1.2:59411464-59411483 | None:intergenic | 50.0% | |
| GGCCATTGCCCTATTTGCAT+AGG | - | chr1.2:59409371-59409390 | None:intergenic | 50.0% | |
| GTGATCTCCTCCATCAAGAG+TGG | - | chr1.2:59411366-59411385 | None:intergenic | 50.0% | |
| GTTCGTCATGCATAGTGTCC+GGG | + | chr1.2:59411286-59411305 | MS.gene40783:intron | 50.0% | |
| GTTCTTTGCAGCTTCAGCCA+TGG | - | chr1.2:59411791-59411810 | None:intergenic | 50.0% | |
| TTATGACCAGGCTTCACGAC+GGG | + | chr1.2:59410919-59410938 | MS.gene40783:intron | 50.0% | |
| TTGGGACACATGTCAGCTCA+TGG | - | chr1.2:59409163-59409182 | None:intergenic | 50.0% | |
| TTGTGCACCAGAGAGAAGTG+AGG | - | chr1.2:59410999-59411018 | None:intergenic | 50.0% | |
| ! | AAATTGGCCTGATAGGTGGG+GGG | + | chr1.2:59413196-59413215 | MS.gene40783:intron | 50.0% |
| ! | AGCAGGACTCAAGGACTAGT+AGG | + | chr1.2:59411408-59411427 | MS.gene40783:CDS | 50.0% |
| ! | CAGTTTGAGGTCTCTTGGAG+AGG | + | chr1.2:59411835-59411854 | MS.gene40783:CDS | 50.0% |
| ! | CCCACCTATCAGGCCAATTT+TGG | - | chr1.2:59413196-59413215 | None:intergenic | 50.0% |
| ! | CCTGAATTGAGGGCATGAGA+CGG | - | chr1.2:59410858-59410877 | None:intergenic | 50.0% |
| ! | CTCTTTTGGCAGCGAAGACA+TGG | + | chr1.2:59412180-59412199 | MS.gene40783:intron | 50.0% |
| ! | CTGAATTGAGGGCATGAGAC+GGG | - | chr1.2:59410857-59410876 | None:intergenic | 50.0% |
| ! | GACCGCCCCTCCAATTTTTA+AGG | - | chr1.2:59410773-59410792 | None:intergenic | 50.0% |
| ! | GCAAGAAAATGCATCGGTGG+TGG | + | chr1.2:59410708-59410727 | MS.gene40783:intron | 50.0% |
| ! | GCTTCTGAGAAAGACCTGGT+AGG | + | chr1.2:59409000-59409019 | MS.gene40783:intron | 50.0% |
| ! | GGCATGAGCTTTGTAACACC+AGG | - | chr1.2:59410531-59410550 | None:intergenic | 50.0% |
| ! | GGTGTTACAAAGCTCATGCC+AGG | + | chr1.2:59410531-59410550 | MS.gene40783:intron | 50.0% |
| ! | GTCTCTTGGAGAGGGTTTTC+TGG | + | chr1.2:59411844-59411863 | MS.gene40783:CDS | 50.0% |
| ! | TGCTGCTTCTGAGAAAGACC+TGG | + | chr1.2:59408996-59409015 | MS.gene40783:CDS | 50.0% |
| AGCATACTCTCGGCGAGCAA+CGG | + | chr1.2:59409676-59409695 | MS.gene40783:CDS | 55.0% | |
| CAGATGCCGAGTTTGCCATG+AGG | + | chr1.2:59409837-59409856 | MS.gene40783:intron | 55.0% | |
| CCGTCTCATGCCCTCAATTC+AGG | + | chr1.2:59410855-59410874 | MS.gene40783:intron | 55.0% | |
| GCCCTCAATTCAGGCAGCAA+TGG | + | chr1.2:59410864-59410883 | MS.gene40783:intron | 55.0% | |
| GCGAGCACGGAAGATTCATG+TGG | - | chr1.2:59413239-59413258 | None:intergenic | 55.0% | |
| GGAGGGGCGGTCAAACAAAA+AGG | + | chr1.2:59410781-59410800 | MS.gene40783:intron | 55.0% | |
| GGCTGAGGATGACTGTACAG+AGG | + | chr1.2:59409625-59409644 | MS.gene40783:CDS | 55.0% | |
| GGTCAGCTGCAATGCATAGG+TGG | + | chr1.2:59412687-59412706 | MS.gene40783:intron | 55.0% | |
| GTGCCTTCCATCAGCTGCTA+AGG | + | chr1.2:59412264-59412283 | MS.gene40783:CDS | 55.0% | |
| TCAAGCTGCTTCTCGAGCCA+TGG | + | chr1.2:59411771-59411790 | MS.gene40783:CDS | 55.0% | |
| TGCAAGCCACAGCTTGGAAC+AGG | + | chr1.2:59411455-59411474 | MS.gene40783:CDS | 55.0% | |
| TGCCGAGTTTGCCATGAGGT+TGG | + | chr1.2:59409841-59409860 | MS.gene40783:CDS | 55.0% | |
| TGTTCCACGTTGAGCGAGCA+CGG | - | chr1.2:59413252-59413271 | None:intergenic | 55.0% | |
| TTGGGCTTGCGTAACAGGGT+GGG | + | chr1.2:59409048-59409067 | MS.gene40783:intron | 55.0% | |
| TTTGGGCTTGCGTAACAGGG+TGG | + | chr1.2:59409047-59409066 | MS.gene40783:intron | 55.0% | |
| ! | ATGCACCCACATTTTCCCCG+TGG | + | chr1.2:59412742-59412761 | MS.gene40783:intron | 55.0% |
| AGGCTTCACGACGGGACACT+AGG | + | chr1.2:59410927-59410946 | MS.gene40783:intron | 60.0% | |
| GAAGGACAGTGGCGCCTTGA+CGG | - | chr1.2:59410268-59410287 | None:intergenic | 60.0% | |
| GGCTACAGCAGTGGGTGAGA+AGG | - | chr1.2:59409350-59409369 | None:intergenic | 60.0% | |
| TAGTGTCCCGTCGTGAAGCC+TGG | - | chr1.2:59410928-59410947 | None:intergenic | 60.0% | |
| TCTTCCGTGCTCGCTCAACG+TGG | + | chr1.2:59413245-59413264 | MS.gene40783:intron | 60.0% | |
| TGGGCTTGCGTAACAGGGTG+GGG | + | chr1.2:59409049-59409068 | MS.gene40783:intron | 60.0% | |
| ATGAGGGCCCCCCACCTATC+AGG | - | chr1.2:59413206-59413225 | None:intergenic | 65.0% | |
| CTGCGCTGAGGCAACTCCGA+TGG | + | chr1.2:59413514-59413533 | MS.gene40783:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 59408856 | 59413589 | 59408856 | ID=MS.gene40783 |
| chr1.2 | mRNA | 59408856 | 59413589 | 59408856 | ID=MS.gene40783.t1;Parent=MS.gene40783 |
| chr1.2 | exon | 59408856 | 59409017 | 59408856 | ID=MS.gene40783.t1.exon1;Parent=MS.gene40783.t1 |
| chr1.2 | CDS | 59408856 | 59409017 | 59408856 | ID=cds.MS.gene40783.t1;Parent=MS.gene40783.t1 |
| chr1.2 | exon | 59409283 | 59409407 | 59409283 | ID=MS.gene40783.t1.exon2;Parent=MS.gene40783.t1 |
| chr1.2 | CDS | 59409283 | 59409407 | 59409283 | ID=cds.MS.gene40783.t1;Parent=MS.gene40783.t1 |
| chr1.2 | exon | 59409616 | 59409737 | 59409616 | ID=MS.gene40783.t1.exon3;Parent=MS.gene40783.t1 |
| chr1.2 | CDS | 59409616 | 59409737 | 59409616 | ID=cds.MS.gene40783.t1;Parent=MS.gene40783.t1 |
| chr1.2 | exon | 59409840 | 59409922 | 59409840 | ID=MS.gene40783.t1.exon4;Parent=MS.gene40783.t1 |
| chr1.2 | CDS | 59409840 | 59409922 | 59409840 | ID=cds.MS.gene40783.t1;Parent=MS.gene40783.t1 |
| chr1.2 | exon | 59411048 | 59411197 | 59411048 | ID=MS.gene40783.t1.exon5;Parent=MS.gene40783.t1 |
| chr1.2 | CDS | 59411048 | 59411197 | 59411048 | ID=cds.MS.gene40783.t1;Parent=MS.gene40783.t1 |
| chr1.2 | exon | 59411333 | 59411476 | 59411333 | ID=MS.gene40783.t1.exon6;Parent=MS.gene40783.t1 |
| chr1.2 | CDS | 59411333 | 59411476 | 59411333 | ID=cds.MS.gene40783.t1;Parent=MS.gene40783.t1 |
| chr1.2 | exon | 59411718 | 59411897 | 59411718 | ID=MS.gene40783.t1.exon7;Parent=MS.gene40783.t1 |
| chr1.2 | CDS | 59411718 | 59411897 | 59411718 | ID=cds.MS.gene40783.t1;Parent=MS.gene40783.t1 |
| chr1.2 | exon | 59412014 | 59412108 | 59412014 | ID=MS.gene40783.t1.exon8;Parent=MS.gene40783.t1 |
| chr1.2 | CDS | 59412014 | 59412108 | 59412014 | ID=cds.MS.gene40783.t1;Parent=MS.gene40783.t1 |
| chr1.2 | exon | 59412192 | 59412289 | 59412192 | ID=MS.gene40783.t1.exon9;Parent=MS.gene40783.t1 |
| chr1.2 | CDS | 59412192 | 59412289 | 59412192 | ID=cds.MS.gene40783.t1;Parent=MS.gene40783.t1 |
| chr1.2 | exon | 59413486 | 59413589 | 59413486 | ID=MS.gene40783.t1.exon10;Parent=MS.gene40783.t1 |
| chr1.2 | CDS | 59413486 | 59413589 | 59413486 | ID=cds.MS.gene40783.t1;Parent=MS.gene40783.t1 |
| Gene Sequence |
| Protein sequence |
