Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42510.t1 | XP_013449620.1 | 98.4 | 874 | 14 | 0 | 1 | 874 | 13 | 886 | 3.80E-233 | 818.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42510.t1 | O22938 | 72.0 | 396 | 110 | 1 | 480 | 874 | 492 | 887 | 4.3e-161 | 570.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42510.t1 | A0A072U3C5 | 98.4 | 874 | 14 | 0 | 1 | 874 | 13 | 886 | 2.7e-233 | 818.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049328 | MS.gene42510 | 0.802843 | 4.63E-49 | -1.69E-46 |
| MS.gene049418 | MS.gene42510 | 0.847434 | 1.16E-59 | -1.69E-46 |
| MS.gene049697 | MS.gene42510 | 0.817275 | 3.59E-52 | -1.69E-46 |
| MS.gene050630 | MS.gene42510 | 0.834204 | 3.43E-56 | -1.69E-46 |
| MS.gene051067 | MS.gene42510 | 0.838424 | 2.90E-57 | -1.69E-46 |
| MS.gene051263 | MS.gene42510 | 0.835631 | 1.50E-56 | -1.69E-46 |
| MS.gene051478 | MS.gene42510 | 0.80616 | 9.41E-50 | -1.69E-46 |
| MS.gene051781 | MS.gene42510 | 0.829958 | 3.85E-55 | -1.69E-46 |
| MS.gene051784 | MS.gene42510 | 0.804751 | 1.86E-49 | -1.69E-46 |
| MS.gene051787 | MS.gene42510 | 0.822108 | 2.83E-53 | -1.69E-46 |
| MS.gene052156 | MS.gene42510 | 0.801528 | 8.63E-49 | -1.69E-46 |
| MS.gene054614 | MS.gene42510 | 0.804181 | 2.44E-49 | -1.69E-46 |
| MS.gene056228 | MS.gene42510 | 0.826597 | 2.49E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 188 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTCTGGCAATGTTCTTT+TGG | 0.157433 | 7.1:-15671932 | MS.gene42510:CDS |
| AACTCTAAGCTCTTGATTTA+TGG | 0.171747 | 7.1:+15674039 | None:intergenic |
| CTTCCTGTTGAAGAAGATTT+TGG | 0.175577 | 7.1:-15671620 | MS.gene42510:CDS |
| GGATTGATTCCTCCTGATTT+TGG | 0.181961 | 7.1:-15673839 | MS.gene42510:CDS |
| AATTTCTCGAATAATCTATT+TGG | 0.205401 | 7.1:-15672708 | MS.gene42510:CDS |
| TTGTCTGGAAATAGCCTATT+TGG | 0.209762 | 7.1:-15673140 | MS.gene42510:CDS |
| TCTGGAGTTTCCCCTCTTAC+AGG | 0.212671 | 7.1:+15671560 | None:intergenic |
| GCTGATAATAATAATCTTTC+TGG | 0.221079 | 7.1:-15673284 | MS.gene42510:CDS |
| ATGAGGGATCTCTCCTCTTA+TGG | 0.227732 | 7.1:+15672983 | None:intergenic |
| CTCACCAACAAGCAAATTAT+TGG | 0.253441 | 7.1:+15673712 | None:intergenic |
| GTTTGTAGGTGCTGAGTTAC+AGG | 0.264761 | 7.1:-15674080 | MS.gene42510:CDS |
| CGGACCATTACCACCAGAAT+TGG | 0.269477 | 7.1:-15672829 | MS.gene42510:CDS |
| GCCTTCTGGTGTGGTCTTAT+CGG | 0.269984 | 7.1:-15672259 | MS.gene42510:CDS |
| GGTGATCTTCCTGGGGAAAT+TGG | 0.286809 | 7.1:-15673407 | MS.gene42510:CDS |
| AGAATCGTACTGGCTGTAAT+TGG | 0.293631 | 7.1:-15672540 | MS.gene42510:CDS |
| AACAATACCGGCAGCCTCTT+TGG | 0.294704 | 7.1:+15672440 | None:intergenic |
| GGAGAGATCCCTCATGAAAT+TGG | 0.298076 | 7.1:-15672975 | MS.gene42510:CDS |
| ATCCATCTTGACATTTCTTC+TGG | 0.299373 | 7.1:-15671946 | MS.gene42510:CDS |
| CTTTCAAATGTTGAGTTTGT+AGG | 0.300725 | 7.1:-15674094 | MS.gene42510:CDS |
| ATGTTTGCATCATTCCATTC+AGG | 0.304943 | 7.1:+15674016 | None:intergenic |
| CTTTCCAATAATTTGCTTGT+TGG | 0.308154 | 7.1:-15673716 | MS.gene42510:CDS |
| CCCGAAGTGAAAATGCTTGA+TGG | 0.309677 | 7.1:+15673470 | None:intergenic |
| GTTCTCTTATCATCTTGTTC+TGG | 0.315316 | 7.1:+15672196 | None:intergenic |
| TATCAGCTTCAAAGTATGTT+AGG | 0.325058 | 7.1:+15673300 | None:intergenic |
| GTTTCAAACAATCGGCTATC+AGG | 0.328964 | 7.1:-15672777 | MS.gene42510:CDS |
| TCTTTCTGGTGAACTAGTTT+CGG | 0.334515 | 7.1:-15673270 | MS.gene42510:CDS |
| GCCCTTTCAAGCATTAGAAT+TGG | 0.337654 | 7.1:-15673374 | MS.gene42510:CDS |
| GGGACGATTCCACAAGAGTT+TGG | 0.340134 | 7.1:-15673191 | MS.gene42510:CDS |
| GGAATCAAGCCTAGATTATC+AGG | 0.341174 | 7.1:+15673542 | None:intergenic |
| GAAAATCTTGTGCGACCTAT+TGG | 0.348314 | 7.1:-15672147 | MS.gene42510:CDS |
| AGCGCAGTTGCCGGCTCCTT+TGG | 0.352294 | 7.1:-15671832 | MS.gene42510:CDS |
| CTCTCGATGTTTCAAACAAT+CGG | 0.353051 | 7.1:-15672785 | MS.gene42510:CDS |
| TAATATCCCAACTGAACTTA+AGG | 0.356848 | 7.1:-15672754 | MS.gene42510:CDS |
| CTCTTGAATTTAGCTTCAAA+TGG | 0.360462 | 7.1:-15673221 | MS.gene42510:CDS |
| GAAATATTGCAGATTTCATT+TGG | 0.361702 | 7.1:+15673038 | None:intergenic |
| CTTGCTCACAAGAATCTTAG+AGG | 0.364214 | 7.1:-15673929 | MS.gene42510:CDS |
| TTGCAACTGAGAATTGGTTT+TGG | 0.365319 | 7.1:+15673110 | None:intergenic |
| GGCCAATCAGGCTTATATTC+AGG | 0.368371 | 7.1:+15672033 | None:intergenic |
| GCAACTCCTGCAATTTCTTT+AGG | 0.372972 | 7.1:+15673669 | None:intergenic |
| GTACTGGCTGTAATTGGTTC+CGG | 0.380465 | 7.1:-15672534 | MS.gene42510:CDS |
| TTTCCCAATTCTGGTGGTAA+TGG | 0.389859 | 7.1:+15672825 | None:intergenic |
| CCATAGCTGTAAACATTTCC+TGG | 0.390213 | 7.1:+15671674 | None:intergenic |
| CTGCATTCTAACCAGCTTGA+AGG | 0.394554 | 7.1:-15673500 | MS.gene42510:CDS |
| GACAAACCAACTATAATTGC+AGG | 0.395779 | 7.1:-15672402 | MS.gene42510:CDS |
| GACCTTTCAAATAATAACTT+TGG | 0.395844 | 7.1:-15673863 | MS.gene42510:CDS |
| TCAGACAAACTCCCAAAATC+AGG | 0.400463 | 7.1:+15673827 | None:intergenic |
| TACAAGGCAACCATGCCTTC+TGG | 0.402078 | 7.1:-15672273 | MS.gene42510:CDS |
| CAGCTATGGTGTTGTTCTGT+TGG | 0.402309 | 7.1:-15671660 | MS.gene42510:CDS |
| TTATCATCTTGTTCTGGTGG+TGG | 0.402811 | 7.1:+15672202 | None:intergenic |
| ATTAGCAACAACAGATTGAA+TGG | 0.405659 | 7.1:-15673068 | MS.gene42510:CDS |
| TCACCAAAATCTTCTTCAAC+AGG | 0.405859 | 7.1:+15671617 | None:intergenic |
| TTCGGGAAAACTAGAAGTTC+TGG | 0.407637 | 7.1:-15673453 | MS.gene42510:CDS |
| ACAGTCCCTGCAATTATAGT+TGG | 0.415000 | 7.1:+15672396 | None:intergenic |
| TTCTCTTCTAATAAGTTTGA+AGG | 0.415412 | 7.1:-15673788 | MS.gene42510:CDS |
| AAGCTTAGTACAGTTTCCTT+TGG | 0.416719 | 7.1:-15671521 | MS.gene42510:CDS |
| TTTAGGCCATGAAGTTCAAT+TGG | 0.418998 | 7.1:+15673686 | None:intergenic |
| GAGTTACCAATTGAACTTCA+TGG | 0.420166 | 7.1:-15673692 | MS.gene42510:CDS |
| CATCGGTGTGGCAGAAGGCT+TGG | 0.421244 | 7.1:-15671992 | MS.gene42510:CDS |
| AACTTGCACTAGGACTCTTC+TGG | 0.422919 | 7.1:+15672658 | None:intergenic |
| GCTTATGAGAATCGTTTAGA+TGG | 0.429443 | 7.1:-15673572 | MS.gene42510:CDS |
| TTGAGCTTCAATCATCTTCA+CGG | 0.434527 | 7.1:-15672849 | MS.gene42510:CDS |
| GGTTCAATTCCATCACAGTT+TGG | 0.435006 | 7.1:-15673767 | MS.gene42510:CDS |
| CAACTGTAATTCAAGAAGTC+TGG | 0.439495 | 7.1:+15672944 | None:intergenic |
| CAACAGGAAGTCGAGTTGTA+AGG | 0.440079 | 7.1:+15671633 | None:intergenic |
| TCCAATTCTAATGCTTGAAA+GGG | 0.440906 | 7.1:+15673373 | None:intergenic |
| AACATTCCCTTAAGTTCAGT+TGG | 0.443567 | 7.1:+15672747 | None:intergenic |
| TTCTCGAATAATCTATTTGG+AGG | 0.444044 | 7.1:-15672705 | MS.gene42510:CDS |
| AACTTTCAGCTCAGTTTACA+AGG | 0.446751 | 7.1:-15672289 | MS.gene42510:CDS |
| AGACTTCTTGAATTACAGTT+GGG | 0.447417 | 7.1:-15672942 | MS.gene42510:CDS |
| AGCTGATACAATGTTCCATT+GGG | 0.447459 | 7.1:+15672078 | None:intergenic |
| CACCAAAGTTATTATTTGAA+AGG | 0.449085 | 7.1:+15673861 | None:intergenic |
| AATTATAGTTGGTTTGTCAT+TGG | 0.449864 | 7.1:+15672407 | None:intergenic |
| GTACAGTTTCCTTTGGTTGG+AGG | 0.450753 | 7.1:-15671514 | MS.gene42510:CDS |
| GATAGCCTAGCAGGCCAATC+AGG | 0.451850 | 7.1:+15672021 | None:intergenic |
| TCATGGCCTAAAGAAATTGC+AGG | 0.453254 | 7.1:-15673675 | MS.gene42510:CDS |
| TCCTGGTGCTGTCACTTGCA+TGG | 0.453558 | 7.1:+15671691 | None:intergenic |
| TTCCAATTCTAATGCTTGAA+AGG | 0.455775 | 7.1:+15673372 | None:intergenic |
| CTTTCAAATAATAACTTTGG+TGG | 0.456486 | 7.1:-15673860 | MS.gene42510:CDS |
| TTAGTACAGTTTCCTTTGGT+TGG | 0.457498 | 7.1:-15671517 | MS.gene42510:CDS |
| TTGAATCTGAATTCCATAAG+AGG | 0.457776 | 7.1:-15672996 | MS.gene42510:CDS |
| GGATGCAAACTTCAAGCCAT+TGG | 0.458541 | 7.1:-15671911 | MS.gene42510:CDS |
| CTCTTATCATCTTGTTCTGG+TGG | 0.458575 | 7.1:+15672199 | None:intergenic |
| GCCTCCACATGAAAAGTTCA+AGG | 0.465274 | 7.1:+15672605 | None:intergenic |
| ATAGTTGGTTTGTCATTGGT+TGG | 0.465982 | 7.1:+15672411 | None:intergenic |
| AATATCCCAACTGAACTTAA+GGG | 0.466598 | 7.1:-15672753 | MS.gene42510:CDS |
| GGTAATATTCCTAAAACCAT+TGG | 0.467646 | 7.1:-15673335 | MS.gene42510:CDS |
| GGCAACTGCGCTTATACTTC+CGG | 0.467952 | 7.1:+15671843 | None:intergenic |
| GGGAATGTTAAGCTTGATAG+AGG | 0.468091 | 7.1:-15672733 | MS.gene42510:CDS |
| GCTTATACTTCCGGTACCTC+TGG | 0.473081 | 7.1:+15671852 | None:intergenic |
| GGAAGTATAAGCGCAGTTGC+CGG | 0.475553 | 7.1:-15671841 | MS.gene42510:CDS |
| TTATGGCATGTATTATAGCT+TGG | 0.475689 | 7.1:+15674056 | None:intergenic |
| TTCCTGATGTGACTGATCTC+AGG | 0.476789 | 7.1:+15672891 | None:intergenic |
| TTAGGCAATAAAGGGCTTTG+TGG | 0.476862 | 7.1:-15672633 | MS.gene42510:CDS |
| AAGCTGATACAATGTTCCAT+TGG | 0.482254 | 7.1:+15672077 | None:intergenic |
| CAGGTTAAGTATTTGAAGCT+CGG | 0.484649 | 7.1:+15673520 | None:intergenic |
| AGAAATGCTTGCTGCTCTAA+AGG | 0.485324 | 7.1:-15671489 | MS.gene42510:CDS |
| GGTAGGATTCCTGATAATCT+AGG | 0.486453 | 7.1:-15673551 | MS.gene42510:CDS |
| AACCTGAATATAAGCCTGAT+TGG | 0.488292 | 7.1:-15672035 | MS.gene42510:CDS |
| CTGGTGTGGTCTTATCGGTC+AGG | 0.489481 | 7.1:-15672254 | MS.gene42510:CDS |
| AACGGTACAAATGTTGGTAC+AGG | 0.491527 | 7.1:+15672681 | None:intergenic |
| ATTGGAAACAACCGTCTAGT+AGG | 0.492703 | 7.1:-15673356 | MS.gene42510:CDS |
| CAGATTACTGCACTTGGCAA+GGG | 0.494370 | 7.1:-15673991 | MS.gene42510:CDS |
| ACATTCCCTTAAGTTCAGTT+GGG | 0.494458 | 7.1:+15672748 | None:intergenic |
| AGGTTAAGTATTTGAAGCTC+GGG | 0.497359 | 7.1:+15673521 | None:intergenic |
| ATGAGAATCGTTTAGATGGT+AGG | 0.497440 | 7.1:-15673568 | MS.gene42510:CDS |
| CCAGGAAATGTTTACAGCTA+TGG | 0.500115 | 7.1:-15671674 | MS.gene42510:CDS |
| CAACAAGCAAATTATTGGAA+AGG | 0.500553 | 7.1:+15673717 | None:intergenic |
| ATGGCAATGGATAGCCTAGC+AGG | 0.501319 | 7.1:+15672012 | None:intergenic |
| ATAAGTTGTCCAAACTCTTG+TGG | 0.501450 | 7.1:+15673182 | None:intergenic |
| CAGACTTCTTGAATTACAGT+TGG | 0.504151 | 7.1:-15672943 | MS.gene42510:CDS |
| TCATAAATGACATAGCCAAT+AGG | 0.505802 | 7.1:+15672132 | None:intergenic |
| CTCCTGAGATCAGTCACATC+AGG | 0.506153 | 7.1:-15672893 | MS.gene42510:CDS |
| ATACTTCCGGTACCTCTGGT+TGG | 0.507395 | 7.1:+15671856 | None:intergenic |
| CTTCAAGCTGGTTAGAATGC+AGG | 0.508769 | 7.1:+15673501 | None:intergenic |
| ATAAGCCTGATTGGCCTGCT+AGG | 0.510979 | 7.1:-15672026 | MS.gene42510:CDS |
| AAGGCGTAGATTTGGTTAAG+TGG | 0.510998 | 7.1:-15671595 | MS.gene42510:CDS |
| TTGGGGAGTAACTATTTGAC+TGG | 0.513179 | 7.1:-15672924 | MS.gene42510:CDS |
| GAAAATAATTATGCAACAGA+AGG | 0.513282 | 7.1:+15672100 | None:intergenic |
| GGACCATTACCACCAGAATT+GGG | 0.514267 | 7.1:-15672828 | MS.gene42510:CDS |
| GGATAATTGCGACATGATGA+AGG | 0.516987 | 7.1:+15671965 | None:intergenic |
| GCAAACTTCAAGCCATTGGT+TGG | 0.517116 | 7.1:-15671907 | MS.gene42510:CDS |
| CTCGATCCAACCAGAGGTAC+CGG | 0.519011 | 7.1:-15671862 | MS.gene42510:CDS |
| TCAGATTACTGCACTTGGCA+AGG | 0.519680 | 7.1:-15673992 | MS.gene42510:CDS |
| CACAATTTCCAATTTCATGA+GGG | 0.520243 | 7.1:+15672967 | None:intergenic |
| GTTCATAGTGCTCCTGTAAG+AGG | 0.522209 | 7.1:-15671572 | MS.gene42510:CDS |
| TCGTTTGGCTGGTGTGCTAT+CGG | 0.526248 | 7.1:+15671451 | None:intergenic |
| GTCAAATTCCCCACCCAAGA+AGG | 0.529529 | 7.1:+15673614 | None:intergenic |
| CATTTCTTTCCTCCAACCAA+AGG | 0.530309 | 7.1:+15671505 | None:intergenic |
| ACCATGCAAGTGACAGCACC+AGG | 0.531696 | 7.1:-15671692 | MS.gene42510:CDS |
| TTCATAGTGCTCCTGTAAGA+GGG | 0.538444 | 7.1:-15671571 | MS.gene42510:CDS |
| TTCTGCCACACCGATGGCAA+TGG | 0.542053 | 7.1:+15671999 | None:intergenic |
| CAAGCCTTCTGCCACACCGA+TGG | 0.542258 | 7.1:+15671993 | None:intergenic |
| ACATTTCAGATTACTGCACT+TGG | 0.544399 | 7.1:-15673997 | MS.gene42510:CDS |
| TTCTAATGCTTGAAAGGGCA+TGG | 0.546081 | 7.1:+15673378 | None:intergenic |
| AAGAGCTTAGAGTTCCTGAA+TGG | 0.546221 | 7.1:-15674030 | MS.gene42510:CDS |
| TGGACAACTTATGAACCTAC+AGG | 0.548488 | 7.1:-15673171 | MS.gene42510:CDS |
| TTTGCATCAAGTATCTGCTC+TGG | 0.550075 | 7.1:+15671542 | None:intergenic |
| ATTGCCATCGGTGTGGCAGA+AGG | 0.550101 | 7.1:-15671997 | MS.gene42510:CDS |
| TTCTGGAACGGTACAAATGT+TGG | 0.552954 | 7.1:+15672675 | None:intergenic |
| AAGTTGTGGAAATCATTCAA+TGG | 0.553266 | 7.1:-15673966 | MS.gene42510:CDS |
| TGGCAGTTGCCAATTTCCCC+AGG | 0.555370 | 7.1:+15673398 | None:intergenic |
| AGGCGTAGATTTGGTTAAGT+GGG | 0.557701 | 7.1:-15671594 | MS.gene42510:CDS |
| GGTTTCTTACAGAATCGTAC+TGG | 0.558518 | 7.1:-15672550 | MS.gene42510:CDS |
| GGCAACCATGCCTTCTGGTG+TGG | 0.561160 | 7.1:-15672268 | MS.gene42510:CDS |
| GGTTGGATCATCAACAATAC+CGG | 0.561435 | 7.1:+15672428 | None:intergenic |
| ATGGTATTGAACCTTCAAGC+TGG | 0.564701 | 7.1:+15673489 | None:intergenic |
| TTAGCAACAACAGATTGAAT+GGG | 0.564735 | 7.1:-15673067 | MS.gene42510:CDS |
| ATCTCAATCTCTCCAACCAA+TGG | 0.565319 | 7.1:+15671895 | None:intergenic |
| CAGACAAAATTAATTCCTGT+AGG | 0.567337 | 7.1:+15673156 | None:intergenic |
| TAGGCTACTAAGATTTCCAA+TGG | 0.571424 | 7.1:+15673319 | None:intergenic |
| GCACAATTTCCAATTTCATG+AGG | 0.572802 | 7.1:+15672966 | None:intergenic |
| CTGAGACCACCAAACTGTGA+TGG | 0.575371 | 7.1:+15673758 | None:intergenic |
| TGCCAGAAGAAATGTCAAGA+TGG | 0.580752 | 7.1:+15671944 | None:intergenic |
| CTTTCTAGTAATCAATTGAG+TGG | 0.580824 | 7.1:-15673644 | MS.gene42510:CDS |
| TCCTTTGGTTACATACCACC+AGG | 0.589541 | 7.1:-15671817 | MS.gene42510:intron |
| TCAATTCCATCACAGTTTGG+TGG | 0.590793 | 7.1:-15673764 | MS.gene42510:CDS |
| TGTCGATAATCTACAACAAG+CGG | 0.593151 | 7.1:-15672370 | MS.gene42510:CDS |
| GACTCGAATAAGCTCAGCAG+TGG | 0.594777 | 7.1:-15672312 | MS.gene42510:CDS |
| TAGGAATATTACCTACTAGA+CGG | 0.596690 | 7.1:+15673345 | None:intergenic |
| TGGTATGTAACCAAAGGAGC+CGG | 0.596921 | 7.1:+15671822 | None:intergenic |
| ACCGATAAGACCACACCAGA+AGG | 0.598744 | 7.1:+15672258 | None:intergenic |
| AAAATAATTATGCAACAGAA+GGG | 0.600195 | 7.1:+15672101 | None:intergenic |
| GACTTCTTGAATTACAGTTG+GGG | 0.601771 | 7.1:-15672941 | MS.gene42510:CDS |
| TAAGACCACACCAGAAGGCA+TGG | 0.603338 | 7.1:+15672263 | None:intergenic |
| TGTGCTATCGGTGCAAAGCA+AGG | 0.604002 | 7.1:+15671463 | None:intergenic |
| AAAGCAGCCAAAGAGGCTGC+CGG | 0.609880 | 7.1:-15672447 | MS.gene42510:CDS |
| GCTAGGCTATCCATTGCCAT+CGG | 0.616624 | 7.1:-15672009 | MS.gene42510:CDS |
| TCGCGTTAACGACAGCATCA+AGG | 0.618362 | 7.1:+15672343 | None:intergenic |
| AGATGATAAGAGAACTCGAA+AGG | 0.619445 | 7.1:-15672188 | MS.gene42510:CDS |
| AGATTACTGCACTTGGCAAG+GGG | 0.621782 | 7.1:-15673990 | MS.gene42510:CDS |
| ACCTGGTGGTATGTAACCAA+AGG | 0.623579 | 7.1:+15671816 | None:intergenic |
| CATTTGAAGCTAAATTCAAG+AGG | 0.626624 | 7.1:+15673222 | None:intergenic |
| ACAAACCAACTATAATTGCA+GGG | 0.630579 | 7.1:-15672401 | MS.gene42510:CDS |
| CCTCCACATGAAAAGTTCAA+GGG | 0.631026 | 7.1:+15672606 | None:intergenic |
| GCACTAGGACTCTTCTGGAA+CGG | 0.633264 | 7.1:+15672663 | None:intergenic |
| TTCTGTAAGAAACCTTGTGA+TGG | 0.636971 | 7.1:+15672559 | None:intergenic |
| TGTTGTTTATGATCCGAGAG+AGG | 0.637645 | 7.1:-15672476 | MS.gene42510:CDS |
| CTGATGTGACTGATCTCAGG+AGG | 0.642948 | 7.1:+15672894 | None:intergenic |
| ATTTGAAGCTAAATTCAAGA+GGG | 0.644014 | 7.1:+15673223 | None:intergenic |
| ACTTGGCAAGGGGTAAGTTG+TGG | 0.648335 | 7.1:-15673980 | MS.gene42510:CDS |
| TCATAGTGCTCCTGTAAGAG+GGG | 0.654142 | 7.1:-15671570 | MS.gene42510:CDS |
| GACAAACTCCCAAAATCAGG+AGG | 0.655852 | 7.1:+15673830 | None:intergenic |
| GCTATCCATTGCCATCGGTG+TGG | 0.669242 | 7.1:-15672004 | MS.gene42510:CDS |
| ACGGTACAAATGTTGGTACA+GGG | 0.671544 | 7.1:+15672682 | None:intergenic |
| GGTCAGGAGACTAAAATCTG+TGG | 0.674913 | 7.1:-15672238 | MS.gene42510:CDS |
| TCACAGTAGTGACCATCACA+AGG | 0.681386 | 7.1:-15672571 | MS.gene42510:CDS |
| AGCTTCTTCATGAATCAACA+AGG | 0.689142 | 7.1:-15672059 | MS.gene42510:CDS |
| AAACTTCTCGATCCAACCAG+AGG | 0.708538 | 7.1:-15671868 | MS.gene42510:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAGTAATATGAAAAATTAAA+TGG | + | chr7.1:15673744-15673763 | None:intergenic | 15.0% |
| !! | AAAATAATTATGCAACAGAA+GGG | + | chr7.1:15673410-15673429 | None:intergenic | 20.0% |
| !! | AATTTCTCGAATAATCTATT+TGG | - | chr7.1:15672800-15672819 | MS.gene42510:CDS | 20.0% |
| ! | ATGTTGAAAAATAGTATACC+TGG | + | chr7.1:15673712-15673731 | None:intergenic | 25.0% |
| ! | CACCAAAGTTATTATTTGAA+AGG | + | chr7.1:15671650-15671669 | None:intergenic | 25.0% |
| ! | CTTTCAAATAATAACTTTGG+TGG | - | chr7.1:15671648-15671667 | MS.gene42510:CDS | 25.0% |
| ! | GAAAATAATTATGCAACAGA+AGG | + | chr7.1:15673411-15673430 | None:intergenic | 25.0% |
| ! | GAAATATTGCAGATTTCATT+TGG | + | chr7.1:15672473-15672492 | None:intergenic | 25.0% |
| ! | GACCTTTCAAATAATAACTT+TGG | - | chr7.1:15671645-15671664 | MS.gene42510:CDS | 25.0% |
| ! | GCTGATAATAATAATCTTTC+TGG | - | chr7.1:15672224-15672243 | MS.gene42510:CDS | 25.0% |
| ! | TTCTCTTCTAATAAGTTTGA+AGG | - | chr7.1:15671720-15671739 | MS.gene42510:intron | 25.0% |
| !! | ATTTGAAGCTAAATTCAAGA+GGG | + | chr7.1:15672288-15672307 | None:intergenic | 25.0% |
| !! | TCTACTACATTCTTCATTTT+TGG | + | chr7.1:15674083-15674102 | None:intergenic | 25.0% |
| !! | TTGCATAATTATTTTCCCAA+TGG | - | chr7.1:15673415-15673434 | MS.gene42510:CDS | 25.0% |
| !!! | AATTATAGTTGGTTTGTCAT+TGG | + | chr7.1:15673104-15673123 | None:intergenic | 25.0% |
| !!! | CAAGTTTTTTAGGCAATAAA+GGG | - | chr7.1:15672867-15672886 | MS.gene42510:CDS | 25.0% |
| AACTCTAAGCTCTTGATTTA+TGG | + | chr7.1:15671472-15671491 | None:intergenic | 30.0% | |
| AAGTTGTGGAAATCATTCAA+TGG | - | chr7.1:15671542-15671561 | MS.gene42510:CDS | 30.0% | |
| AATATCCCAACTGAACTTAA+GGG | - | chr7.1:15672755-15672774 | MS.gene42510:CDS | 30.0% | |
| ACAAACCAACTATAATTGCA+GGG | - | chr7.1:15673107-15673126 | MS.gene42510:CDS | 30.0% | |
| AGACTTCTTGAATTACAGTT+GGG | - | chr7.1:15672566-15672585 | MS.gene42510:CDS | 30.0% | |
| ATTAGCAACAACAGATTGAA+TGG | - | chr7.1:15672440-15672459 | MS.gene42510:CDS | 30.0% | |
| CAACAAGCAAATTATTGGAA+AGG | + | chr7.1:15671794-15671813 | None:intergenic | 30.0% | |
| CACAATTTCCAATTTCATGA+GGG | + | chr7.1:15672544-15672563 | None:intergenic | 30.0% | |
| CAGACAAAATTAATTCCTGT+AGG | + | chr7.1:15672355-15672374 | None:intergenic | 30.0% | |
| CGAAATAAAAACTGTCAAAC+CGG | + | chr7.1:15672996-15673015 | None:intergenic | 30.0% | |
| CTTTCAAATGTTGAGTTTGT+AGG | - | chr7.1:15671414-15671433 | MS.gene42510:CDS | 30.0% | |
| GGTAATATTCCTAAAACCAT+TGG | - | chr7.1:15672173-15672192 | MS.gene42510:CDS | 30.0% | |
| TAATATCCCAACTGAACTTA+AGG | - | chr7.1:15672754-15672773 | MS.gene42510:CDS | 30.0% | |
| TAGGAATATTACCTACTAGA+CGG | + | chr7.1:15672166-15672185 | None:intergenic | 30.0% | |
| TATCAGCTTCAAAGTATGTT+AGG | + | chr7.1:15672211-15672230 | None:intergenic | 30.0% | |
| TCATAAATGACATAGCCAAT+AGG | + | chr7.1:15673379-15673398 | None:intergenic | 30.0% | |
| TCCAATTCTAATGCTTGAAA+GGG | + | chr7.1:15672138-15672157 | None:intergenic | 30.0% | |
| TTAGCAACAACAGATTGAAT+GGG | - | chr7.1:15672441-15672460 | MS.gene42510:CDS | 30.0% | |
| TTATGGCATGTATTATAGCT+TGG | + | chr7.1:15671455-15671474 | None:intergenic | 30.0% | |
| TTCCAATTCTAATGCTTGAA+AGG | + | chr7.1:15672139-15672158 | None:intergenic | 30.0% | |
| TTCTCGAATAATCTATTTGG+AGG | - | chr7.1:15672803-15672822 | MS.gene42510:CDS | 30.0% | |
| TTGAAAAATAGTATACCTGG+TGG | + | chr7.1:15673709-15673728 | None:intergenic | 30.0% | |
| TTGAATCTGAATTCCATAAG+AGG | - | chr7.1:15672512-15672531 | MS.gene42510:CDS | 30.0% | |
| ! | CATTTGAAGCTAAATTCAAG+AGG | + | chr7.1:15672289-15672308 | None:intergenic | 30.0% |
| ! | CTAAGATTTCCAATGGTTTT+AGG | + | chr7.1:15672185-15672204 | None:intergenic | 30.0% |
| ! | CTACAGGAATTAATTTTGTC+TGG | - | chr7.1:15672353-15672372 | MS.gene42510:CDS | 30.0% |
| ! | CTCACTCAGAATAATTTTAG+TGG | - | chr7.1:15672080-15672099 | MS.gene42510:CDS | 30.0% |
| ! | CTCTTGAATTTAGCTTCAAA+TGG | - | chr7.1:15672287-15672306 | MS.gene42510:CDS | 30.0% |
| ! | CTTTCTAGTAATCAATTGAG+TGG | - | chr7.1:15671864-15671883 | MS.gene42510:CDS | 30.0% |
| !! | CGGTTTGACAGTTTTTATTT+CGG | - | chr7.1:15672994-15673013 | MS.gene42510:CDS | 30.0% |
| !! | CTTTCCAATAATTTGCTTGT+TGG | - | chr7.1:15671792-15671811 | MS.gene42510:intron | 30.0% |
| !! | TAGCTTCAAATGGATTTTCT+GGG | - | chr7.1:15672297-15672316 | MS.gene42510:CDS | 30.0% |
| !! | TTAGCTTCAAATGGATTTTC+TGG | - | chr7.1:15672296-15672315 | MS.gene42510:CDS | 30.0% |
| !!! | ATTCTTCATTTTTGGTCGTT+TGG | + | chr7.1:15674075-15674094 | None:intergenic | 30.0% |
| !!! | GCAAGTTTTTTAGGCAATAA+AGG | - | chr7.1:15672866-15672885 | MS.gene42510:CDS | 30.0% |
| !!! | GTTTTGGAATATCACCAAAT+AGG | + | chr7.1:15672385-15672404 | None:intergenic | 30.0% |
| AACATTCCCTTAAGTTCAGT+TGG | + | chr7.1:15672764-15672783 | None:intergenic | 35.0% | |
| AACCTGAATATAAGCCTGAT+TGG | - | chr7.1:15673473-15673492 | MS.gene42510:CDS | 35.0% | |
| AACTTTCAGCTCAGTTTACA+AGG | - | chr7.1:15673219-15673238 | MS.gene42510:CDS | 35.0% | |
| AAGCTGATACAATGTTCCAT+TGG | + | chr7.1:15673434-15673453 | None:intergenic | 35.0% | |
| AAGCTTAGTACAGTTTCCTT+TGG | - | chr7.1:15673987-15674006 | MS.gene42510:CDS | 35.0% | |
| ACATTCCCTTAAGTTCAGTT+GGG | + | chr7.1:15672763-15672782 | None:intergenic | 35.0% | |
| ACATTTCAGATTACTGCACT+TGG | - | chr7.1:15671511-15671530 | MS.gene42510:CDS | 35.0% | |
| AGATGATAAGAGAACTCGAA+AGG | - | chr7.1:15673320-15673339 | MS.gene42510:CDS | 35.0% | |
| AGCTGATACAATGTTCCATT+GGG | + | chr7.1:15673433-15673452 | None:intergenic | 35.0% | |
| AGCTTCTTCATGAATCAACA+AGG | - | chr7.1:15673449-15673468 | MS.gene42510:CDS | 35.0% | |
| ATAAGTTGTCCAAACTCTTG+TGG | + | chr7.1:15672329-15672348 | None:intergenic | 35.0% | |
| ATCCATCTTGACATTTCTTC+TGG | - | chr7.1:15673562-15673581 | MS.gene42510:CDS | 35.0% | |
| ATGAGAATCGTTTAGATGGT+AGG | - | chr7.1:15671940-15671959 | MS.gene42510:CDS | 35.0% | |
| ATGTTTGCATCATTCCATTC+AGG | + | chr7.1:15671495-15671514 | None:intergenic | 35.0% | |
| CAACTGTAATTCAAGAAGTC+TGG | + | chr7.1:15672567-15672586 | None:intergenic | 35.0% | |
| CAGACTTCTTGAATTACAGT+TGG | - | chr7.1:15672565-15672584 | MS.gene42510:CDS | 35.0% | |
| CTCACCAACAAGCAAATTAT+TGG | + | chr7.1:15671799-15671818 | None:intergenic | 35.0% | |
| CTCTCGATGTTTCAAACAAT+CGG | - | chr7.1:15672723-15672742 | MS.gene42510:CDS | 35.0% | |
| GACAAACCAACTATAATTGC+AGG | - | chr7.1:15673106-15673125 | MS.gene42510:CDS | 35.0% | |
| GACTTCTTGAATTACAGTTG+GGG | - | chr7.1:15672567-15672586 | MS.gene42510:CDS | 35.0% | |
| GAGTTACCAATTGAACTTCA+TGG | - | chr7.1:15671816-15671835 | MS.gene42510:intron | 35.0% | |
| GCACAATTTCCAATTTCATG+AGG | + | chr7.1:15672545-15672564 | None:intergenic | 35.0% | |
| GCTTATGAGAATCGTTTAGA+TGG | - | chr7.1:15671936-15671955 | MS.gene42510:CDS | 35.0% | |
| GTTCTCTTATCATCTTGTTC+TGG | + | chr7.1:15673315-15673334 | None:intergenic | 35.0% | |
| TAGGCTACTAAGATTTCCAA+TGG | + | chr7.1:15672192-15672211 | None:intergenic | 35.0% | |
| TCACCAAAATCTTCTTCAAC+AGG | + | chr7.1:15673894-15673913 | None:intergenic | 35.0% | |
| TGTCGATAATCTACAACAAG+CGG | - | chr7.1:15673138-15673157 | MS.gene42510:CDS | 35.0% | |
| TTAGTACAGTTTCCTTTGGT+TGG | - | chr7.1:15673991-15674010 | MS.gene42510:CDS | 35.0% | |
| TTCTGTAAGAAACCTTGTGA+TGG | + | chr7.1:15672952-15672971 | None:intergenic | 35.0% | |
| TTGAGCTTCAATCATCTTCA+CGG | - | chr7.1:15672659-15672678 | MS.gene42510:CDS | 35.0% | |
| TTGCCTAAAAAACTTGCACT+AGG | + | chr7.1:15672863-15672882 | None:intergenic | 35.0% | |
| TTGTCTGGAAATAGCCTATT+TGG | - | chr7.1:15672368-15672387 | MS.gene42510:CDS | 35.0% | |
| TTTAGGCCATGAAGTTCAAT+TGG | + | chr7.1:15671825-15671844 | None:intergenic | 35.0% | |
| ! | ACCATCAAGCATTTTCACTT+CGG | - | chr7.1:15672037-15672056 | MS.gene42510:CDS | 35.0% |
| ! | AGACTTTTGCAACTGAGAAT+TGG | + | chr7.1:15672407-15672426 | None:intergenic | 35.0% |
| ! | AGGTTAAGTATTTGAAGCTC+GGG | + | chr7.1:15671990-15672009 | None:intergenic | 35.0% |
| ! | CAGGTTAAGTATTTGAAGCT+CGG | + | chr7.1:15671991-15672010 | None:intergenic | 35.0% |
| ! | CTTCCTGTTGAAGAAGATTT+TGG | - | chr7.1:15673888-15673907 | MS.gene42510:CDS | 35.0% |
| ! | TCTTTCTGGTGAACTAGTTT+CGG | - | chr7.1:15672238-15672257 | MS.gene42510:CDS | 35.0% |
| ! | TTCTTCTGGCAATGTTCTTT+TGG | - | chr7.1:15673576-15673595 | MS.gene42510:CDS | 35.0% |
| !! | AATTTTAGTGGTGATCTTCC+TGG | - | chr7.1:15672092-15672111 | MS.gene42510:CDS | 35.0% |
| !! | ATAGTTGGTTTGTCATTGGT+TGG | + | chr7.1:15673100-15673119 | None:intergenic | 35.0% |
| !! | ATTTTAGTGGTGATCTTCCT+GGG | - | chr7.1:15672093-15672112 | MS.gene42510:CDS | 35.0% |
| !! | GATTGATTCCTCCTGATTTT+GGG | - | chr7.1:15671670-15671689 | MS.gene42510:CDS | 35.0% |
| !! | GTTGAAGAAGATTTTGGTGA+AGG | - | chr7.1:15673894-15673913 | MS.gene42510:CDS | 35.0% |
| !! | TTGCAACTGAGAATTGGTTT+TGG | + | chr7.1:15672401-15672420 | None:intergenic | 35.0% |
| !!! | AGTCCTAGTGCAAGTTTTTT+AGG | - | chr7.1:15672857-15672876 | MS.gene42510:CDS | 35.0% |
| !!! | GACCAACTTGAGAGTTTTTT+CGG | - | chr7.1:15671914-15671933 | MS.gene42510:CDS | 35.0% |
| !!! | GAGTGGTTTTATACCTTCTT+GGG | - | chr7.1:15671881-15671900 | MS.gene42510:CDS | 35.0% |
| !!! | TGAGTGGTTTTATACCTTCT+TGG | - | chr7.1:15671880-15671899 | MS.gene42510:CDS | 35.0% |
| !!! | TTGTCTAGTTTTCCCAATTC+TGG | + | chr7.1:15672695-15672714 | None:intergenic | 35.0% |
| AACGGTACAAATGTTGGTAC+AGG | + | chr7.1:15672830-15672849 | None:intergenic | 40.0% | |
| AAGAGCTTAGAGTTCCTGAA+TGG | - | chr7.1:15671478-15671497 | MS.gene42510:CDS | 40.0% | |
| ACAGTCCCTGCAATTATAGT+TGG | + | chr7.1:15673115-15673134 | None:intergenic | 40.0% | |
| ACGGTACAAATGTTGGTACA+GGG | + | chr7.1:15672829-15672848 | None:intergenic | 40.0% | |
| AGCCGAAAAAACTCTCAAGT+TGG | + | chr7.1:15671919-15671938 | None:intergenic | 40.0% | |
| ATCTCAATCTCTCCAACCAA+TGG | + | chr7.1:15673616-15673635 | None:intergenic | 40.0% | |
| ATTGGAAACAACCGTCTAGT+AGG | - | chr7.1:15672152-15672171 | MS.gene42510:CDS | 40.0% | |
| CATTTCTTTCCTCCAACCAA+AGG | + | chr7.1:15674006-15674025 | None:intergenic | 40.0% | |
| CCAGGAAATGTTTACAGCTA+TGG | - | chr7.1:15673834-15673853 | MS.gene42510:CDS | 40.0% | |
| CCATAGCTGTAAACATTTCC+TGG | + | chr7.1:15673837-15673856 | None:intergenic | 40.0% | |
| CCTCCACATGAAAAGTTCAA+GGG | + | chr7.1:15672905-15672924 | None:intergenic | 40.0% | |
| CTCTTATCATCTTGTTCTGG+TGG | + | chr7.1:15673312-15673331 | None:intergenic | 40.0% | |
| CTTGCTCACAAGAATCTTAG+AGG | - | chr7.1:15671579-15671598 | MS.gene42510:CDS | 40.0% | |
| GAAAATCTTGTGCGACCTAT+TGG | - | chr7.1:15673361-15673380 | MS.gene42510:CDS | 40.0% | |
| GCAACTCCTGCAATTTCTTT+AGG | + | chr7.1:15671842-15671861 | None:intergenic | 40.0% | |
| GCCCTTTCAAGCATTAGAAT+TGG | - | chr7.1:15672134-15672153 | MS.gene42510:CDS | 40.0% | |
| GGAATCAAGCCTAGATTATC+AGG | + | chr7.1:15671969-15671988 | None:intergenic | 40.0% | |
| GGATAATTGCGACATGATGA+AGG | + | chr7.1:15673546-15673565 | None:intergenic | 40.0% | |
| GGGAATGTTAAGCTTGATAG+AGG | - | chr7.1:15672775-15672794 | MS.gene42510:CDS | 40.0% | |
| GGTAGGATTCCTGATAATCT+AGG | - | chr7.1:15671957-15671976 | MS.gene42510:CDS | 40.0% | |
| GGTTCAATTCCATCACAGTT+TGG | - | chr7.1:15671741-15671760 | MS.gene42510:intron | 40.0% | |
| GGTTGGATCATCAACAATAC+CGG | + | chr7.1:15673083-15673102 | None:intergenic | 40.0% | |
| GGTTTCTTACAGAATCGTAC+TGG | - | chr7.1:15672958-15672977 | MS.gene42510:CDS | 40.0% | |
| GTTTCAAACAATCGGCTATC+AGG | - | chr7.1:15672731-15672750 | MS.gene42510:CDS | 40.0% | |
| TCAATTCCATCACAGTTTGG+TGG | - | chr7.1:15671744-15671763 | MS.gene42510:intron | 40.0% | |
| TCAGACAAACTCCCAAAATC+AGG | + | chr7.1:15671684-15671703 | None:intergenic | 40.0% | |
| TCATGGCCTAAAGAAATTGC+AGG | - | chr7.1:15671833-15671852 | MS.gene42510:CDS | 40.0% | |
| TGCCAGAAGAAATGTCAAGA+TGG | + | chr7.1:15673567-15673586 | None:intergenic | 40.0% | |
| TGGACAACTTATGAACCTAC+AGG | - | chr7.1:15672337-15672356 | MS.gene42510:CDS | 40.0% | |
| TTAGGCAATAAAGGGCTTTG+TGG | - | chr7.1:15672875-15672894 | MS.gene42510:CDS | 40.0% | |
| TTATCATCTTGTTCTGGTGG+TGG | + | chr7.1:15673309-15673328 | None:intergenic | 40.0% | |
| TTCATAGTGCTCCTGTAAGA+GGG | - | chr7.1:15673937-15673956 | MS.gene42510:CDS | 40.0% | |
| TTCGGGAAAACTAGAAGTTC+TGG | - | chr7.1:15672055-15672074 | MS.gene42510:CDS | 40.0% | |
| TTCTAATGCTTGAAAGGGCA+TGG | + | chr7.1:15672133-15672152 | None:intergenic | 40.0% | |
| TTGGGGAGTAACTATTTGAC+TGG | - | chr7.1:15672584-15672603 | MS.gene42510:CDS | 40.0% | |
| TTTCCCAATTCTGGTGGTAA+TGG | + | chr7.1:15672686-15672705 | None:intergenic | 40.0% | |
| TTTGCATCAAGTATCTGCTC+TGG | + | chr7.1:15673969-15673988 | None:intergenic | 40.0% | |
| ! | AAGGCGTAGATTTGGTTAAG+TGG | - | chr7.1:15673913-15673932 | MS.gene42510:CDS | 40.0% |
| ! | AGAAATGCTTGCTGCTCTAA+AGG | - | chr7.1:15674019-15674038 | MS.gene42510:CDS | 40.0% |
| ! | AGGCGTAGATTTGGTTAAGT+GGG | - | chr7.1:15673914-15673933 | MS.gene42510:CDS | 40.0% |
| ! | ATGGTATTGAACCTTCAAGC+TGG | + | chr7.1:15672022-15672041 | None:intergenic | 40.0% |
| ! | CCATCAAGCATTTTCACTTC+GGG | - | chr7.1:15672038-15672057 | MS.gene42510:CDS | 40.0% |
| ! | GTTTTATACCTTCTTGGGTG+GGG | - | chr7.1:15671886-15671905 | MS.gene42510:CDS | 40.0% |
| ! | TGTTGTTTATGATCCGAGAG+AGG | - | chr7.1:15673032-15673051 | MS.gene42510:CDS | 40.0% |
| ! | TTTTAGTGGTGATCTTCCTG+GGG | - | chr7.1:15672094-15672113 | MS.gene42510:CDS | 40.0% |
| !! | AGAATCGTACTGGCTGTAAT+TGG | - | chr7.1:15672968-15672987 | MS.gene42510:CDS | 40.0% |
| !! | GGATTGATTCCTCCTGATTT+TGG | - | chr7.1:15671669-15671688 | MS.gene42510:CDS | 40.0% |
| !! | GGTTTTATACCTTCTTGGGT+GGG | - | chr7.1:15671885-15671904 | MS.gene42510:CDS | 40.0% |
| !! | TTCTGGAACGGTACAAATGT+TGG | + | chr7.1:15672836-15672855 | None:intergenic | 40.0% |
| !! | TTTTGGTGAAGGCGTAGATT+TGG | - | chr7.1:15673905-15673924 | MS.gene42510:CDS | 40.0% |
| !!! | TCTAGTTTTCCCAATTCTGG+TGG | + | chr7.1:15672692-15672711 | None:intergenic | 40.0% |
| !!! | TGGTTTTATACCTTCTTGGG+TGG | - | chr7.1:15671884-15671903 | MS.gene42510:CDS | 40.0% |
| !!! | TTCATTTTTGGTCGTTTGGC+TGG | + | chr7.1:15674071-15674090 | None:intergenic | 40.0% |
| AAACTTCTCGATCCAACCAG+AGG | - | chr7.1:15673640-15673659 | MS.gene42510:CDS | 45.0% | |
| AACTTGCACTAGGACTCTTC+TGG | + | chr7.1:15672853-15672872 | None:intergenic | 45.0% | |
| ACCTGGTGGTATGTAACCAA+AGG | + | chr7.1:15673695-15673714 | None:intergenic | 45.0% | |
| AGATTACTGCACTTGGCAAG+GGG | - | chr7.1:15671518-15671537 | MS.gene42510:CDS | 45.0% | |
| ATGAGGGATCTCTCCTCTTA+TGG | + | chr7.1:15672528-15672547 | None:intergenic | 45.0% | |
| CAGATTACTGCACTTGGCAA+GGG | - | chr7.1:15671517-15671536 | MS.gene42510:CDS | 45.0% | |
| CCCGAAGTGAAAATGCTTGA+TGG | + | chr7.1:15672041-15672060 | None:intergenic | 45.0% | |
| CTGCATTCTAACCAGCTTGA+AGG | - | chr7.1:15672008-15672027 | MS.gene42510:CDS | 45.0% | |
| CTTCAAGCTGGTTAGAATGC+AGG | + | chr7.1:15672010-15672029 | None:intergenic | 45.0% | |
| GACAAACTCCCAAAATCAGG+AGG | + | chr7.1:15671681-15671700 | None:intergenic | 45.0% | |
| GCAAACTTCAAGCCATTGGT+TGG | - | chr7.1:15673601-15673620 | MS.gene42510:CDS | 45.0% | |
| GCAAGAAAAAGCAGCCAAAG+AGG | - | chr7.1:15673054-15673073 | MS.gene42510:CDS | 45.0% | |
| GCCTCCACATGAAAAGTTCA+AGG | + | chr7.1:15672906-15672925 | None:intergenic | 45.0% | |
| GGACCATTACCACCAGAATT+GGG | - | chr7.1:15672680-15672699 | MS.gene42510:CDS | 45.0% | |
| GGAGAGATCCCTCATGAAAT+TGG | - | chr7.1:15672533-15672552 | MS.gene42510:CDS | 45.0% | |
| GGATGCAAACTTCAAGCCAT+TGG | - | chr7.1:15673597-15673616 | MS.gene42510:CDS | 45.0% | |
| GGCCAATCAGGCTTATATTC+AGG | + | chr7.1:15673478-15673497 | None:intergenic | 45.0% | |
| GGTCAGGAGACTAAAATCTG+TGG | - | chr7.1:15673270-15673289 | MS.gene42510:CDS | 45.0% | |
| GTACAGTTTCCTTTGGTTGG+AGG | - | chr7.1:15673994-15674013 | MS.gene42510:CDS | 45.0% | |
| GTTCATAGTGCTCCTGTAAG+AGG | - | chr7.1:15673936-15673955 | MS.gene42510:CDS | 45.0% | |
| TCACAGTAGTGACCATCACA+AGG | - | chr7.1:15672937-15672956 | MS.gene42510:CDS | 45.0% | |
| TCAGATTACTGCACTTGGCA+AGG | - | chr7.1:15671516-15671535 | MS.gene42510:CDS | 45.0% | |
| TCATAGTGCTCCTGTAAGAG+GGG | - | chr7.1:15673938-15673957 | MS.gene42510:CDS | 45.0% | |
| TCCTTTGGTTACATACCACC+AGG | - | chr7.1:15673691-15673710 | MS.gene42510:CDS | 45.0% | |
| TGGTATGTAACCAAAGGAGC+CGG | + | chr7.1:15673689-15673708 | None:intergenic | 45.0% | |
| TTCCTGATGTGACTGATCTC+AGG | + | chr7.1:15672620-15672639 | None:intergenic | 45.0% | |
| ! | CAACAGGAAGTCGAGTTGTA+AGG | + | chr7.1:15673878-15673897 | None:intergenic | 45.0% |
| ! | CCCTTGAACTTTTCATGTGG+AGG | - | chr7.1:15672902-15672921 | MS.gene42510:CDS | 45.0% |
| ! | GAGCCCTTGAACTTTTCATG+TGG | - | chr7.1:15672899-15672918 | MS.gene42510:CDS | 45.0% |
| !! | CAGCTATGGTGTTGTTCTGT+TGG | - | chr7.1:15673848-15673867 | MS.gene42510:CDS | 45.0% |
| !! | GTACTGGCTGTAATTGGTTC+CGG | - | chr7.1:15672974-15672993 | MS.gene42510:CDS | 45.0% |
| !! | GTTTGTAGGTGCTGAGTTAC+AGG | - | chr7.1:15671428-15671447 | MS.gene42510:CDS | 45.0% |
| !! | TTTTGGGAGTTTGTCTGAGC+TGG | - | chr7.1:15671686-15671705 | MS.gene42510:CDS | 45.0% |
| !!! | CTGCTTTTTCTTGCCTCTCT+CGG | + | chr7.1:15673048-15673067 | None:intergenic | 45.0% |
| AACAATACCGGCAGCCTCTT+TGG | + | chr7.1:15673071-15673090 | None:intergenic | 50.0% | |
| ACCGATAAGACCACACCAGA+AGG | + | chr7.1:15673253-15673272 | None:intergenic | 50.0% | |
| ACTTGGCAAGGGGTAAGTTG+TGG | - | chr7.1:15671528-15671547 | MS.gene42510:CDS | 50.0% | |
| ATACTTCCGGTACCTCTGGT+TGG | + | chr7.1:15673655-15673674 | None:intergenic | 50.0% | |
| ATGGCAATGGATAGCCTAGC+AGG | + | chr7.1:15673499-15673518 | None:intergenic | 50.0% | |
| CGGACCATTACCACCAGAAT+TGG | - | chr7.1:15672679-15672698 | MS.gene42510:CDS | 50.0% | |
| CTCCTGAGATCAGTCACATC+AGG | - | chr7.1:15672615-15672634 | MS.gene42510:CDS | 50.0% | |
| CTGAGACCACCAAACTGTGA+TGG | + | chr7.1:15671753-15671772 | None:intergenic | 50.0% | |
| CTGATGTGACTGATCTCAGG+AGG | + | chr7.1:15672617-15672636 | None:intergenic | 50.0% | |
| GACTCGAATAAGCTCAGCAG+TGG | - | chr7.1:15673196-15673215 | MS.gene42510:CDS | 50.0% | |
| GCTAGGCTATCCATTGCCAT+CGG | - | chr7.1:15673499-15673518 | MS.gene42510:CDS | 50.0% | |
| GCTTATACTTCCGGTACCTC+TGG | + | chr7.1:15673659-15673678 | None:intergenic | 50.0% | |
| GGCAACTGCGCTTATACTTC+CGG | + | chr7.1:15673668-15673687 | None:intergenic | 50.0% | |
| GGGACGATTCCACAAGAGTT+TGG | - | chr7.1:15672317-15672336 | MS.gene42510:CDS | 50.0% | |
| GGTGATCTTCCTGGGGAAAT+TGG | - | chr7.1:15672101-15672120 | MS.gene42510:CDS | 50.0% | |
| GTCAAATTCCCCACCCAAGA+AGG | + | chr7.1:15671897-15671916 | None:intergenic | 50.0% | |
| TAAGACCACACCAGAAGGCA+TGG | + | chr7.1:15673248-15673267 | None:intergenic | 50.0% | |
| TACAAGGCAACCATGCCTTC+TGG | - | chr7.1:15673235-15673254 | MS.gene42510:CDS | 50.0% | |
| TCGCGTTAACGACAGCATCA+AGG | + | chr7.1:15673168-15673187 | None:intergenic | 50.0% | |
| TCGTTTGGCTGGTGTGCTAT+CGG | + | chr7.1:15674060-15674079 | None:intergenic | 50.0% | |
| TGTGCTATCGGTGCAAAGCA+AGG | + | chr7.1:15674048-15674067 | None:intergenic | 50.0% | |
| ! | GCACTAGGACTCTTCTGGAA+CGG | + | chr7.1:15672848-15672867 | None:intergenic | 50.0% |
| ! | GGAAGTATAAGCGCAGTTGC+CGG | - | chr7.1:15673667-15673686 | MS.gene42510:CDS | 50.0% |
| ! | TCTGGAGTTTCCCCTCTTAC+AGG | + | chr7.1:15673951-15673970 | None:intergenic | 50.0% |
| !! | ATAAGCCTGATTGGCCTGCT+AGG | - | chr7.1:15673482-15673501 | MS.gene42510:CDS | 50.0% |
| !! | GCCTTCTGGTGTGGTCTTAT+CGG | - | chr7.1:15673249-15673268 | MS.gene42510:CDS | 50.0% |
| AAAGCAGCCAAAGAGGCTGC+CGG | - | chr7.1:15673061-15673080 | MS.gene42510:CDS | 55.0% | |
| ACCATGCAAGTGACAGCACC+AGG | - | chr7.1:15673816-15673835 | MS.gene42510:CDS | 55.0% | |
| ATTGCCATCGGTGTGGCAGA+AGG | - | chr7.1:15673511-15673530 | MS.gene42510:CDS | 55.0% | |
| GATAGCCTAGCAGGCCAATC+AGG | + | chr7.1:15673490-15673509 | None:intergenic | 55.0% | |
| GCTATCCATTGCCATCGGTG+TGG | - | chr7.1:15673504-15673523 | MS.gene42510:CDS | 55.0% | |
| TGGCAGTTGCCAATTTCCCC+AGG | + | chr7.1:15672113-15672132 | None:intergenic | 55.0% | |
| TTCTGCCACACCGATGGCAA+TGG | + | chr7.1:15673512-15673531 | None:intergenic | 55.0% | |
| ! | CTCGATCCAACCAGAGGTAC+CGG | - | chr7.1:15673646-15673665 | MS.gene42510:CDS | 55.0% |
| !! | CTGGTGTGGTCTTATCGGTC+AGG | - | chr7.1:15673254-15673273 | MS.gene42510:CDS | 55.0% |
| !! | TCCTGGTGCTGTCACTTGCA+TGG | + | chr7.1:15673820-15673839 | None:intergenic | 55.0% |
| CAAGCCTTCTGCCACACCGA+TGG | + | chr7.1:15673518-15673537 | None:intergenic | 60.0% | |
| CATCGGTGTGGCAGAAGGCT+TGG | - | chr7.1:15673516-15673535 | MS.gene42510:CDS | 60.0% | |
| GGCAACCATGCCTTCTGGTG+TGG | - | chr7.1:15673240-15673259 | MS.gene42510:CDS | 60.0% | |
| !! | AGCGCAGTTGCCGGCTCCTT+TGG | - | chr7.1:15673676-15673695 | MS.gene42510:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 15671406 | 15674124 | 15671406 | ID=MS.gene42510 |
| chr7.1 | mRNA | 15671406 | 15674124 | 15671406 | ID=MS.gene42510.t1;Parent=MS.gene42510 |
| chr7.1 | exon | 15671818 | 15674124 | 15671818 | ID=MS.gene42510.t1.exon1;Parent=MS.gene42510.t1 |
| chr7.1 | CDS | 15671818 | 15674124 | 15671818 | ID=cds.MS.gene42510.t1;Parent=MS.gene42510.t1 |
| chr7.1 | exon | 15671406 | 15671725 | 15671406 | ID=MS.gene42510.t1.exon2;Parent=MS.gene42510.t1 |
| chr7.1 | CDS | 15671406 | 15671725 | 15671406 | ID=cds.MS.gene42510.t1;Parent=MS.gene42510.t1 |
| Gene Sequence |
| Protein sequence |
