Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44956.t1 | XP_013446473.1 | 98 | 441 | 8 | 1 | 1 | 440 | 1 | 441 | 4.70E-254 | 886.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44956.t1 | Q00624 | 54.4 | 447 | 192 | 4 | 9 | 444 | 6 | 451 | 1.6e-138 | 494.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44956.t1 | A0A072U3T7 | 98.0 | 441 | 8 | 1 | 1 | 440 | 1 | 441 | 3.4e-254 | 886.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050338 | MS.gene44956 | 0.820389 | 7.04E-53 | -1.69E-46 |
| MS.gene052308 | MS.gene44956 | 0.817705 | 2.87E-52 | -1.69E-46 |
| MS.gene054941 | MS.gene44956 | 0.803185 | 3.93E-49 | -1.69E-46 |
| MS.gene056694 | MS.gene44956 | 0.810043 | 1.40E-50 | -1.69E-46 |
| MS.gene056697 | MS.gene44956 | 0.830087 | 3.58E-55 | -1.69E-46 |
| MS.gene057717 | MS.gene44956 | 0.808607 | 2.85E-50 | -1.69E-46 |
| MS.gene058382 | MS.gene44956 | 0.80234 | 5.88E-49 | -1.69E-46 |
| MS.gene05926 | MS.gene44956 | 0.832735 | 7.98E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene44958 | MS.gene44956 | PPI |
| MS.gene44956 | MS.gene87346 | PPI |
| MS.gene011879 | MS.gene44956 | PPI |
| MS.gene28548 | MS.gene44956 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44956.t1 | MTR_8g479390 | 97.959 | 441 | 8 | 1 | 1 | 440 | 1 | 441 | 0.0 | 883 |
| MS.gene44956.t1 | MTR_5g018270 | 82.100 | 419 | 73 | 1 | 22 | 440 | 22 | 438 | 0.0 | 703 |
| MS.gene44956.t1 | MTR_8g479380 | 65.187 | 428 | 146 | 3 | 15 | 440 | 13 | 439 | 0.0 | 589 |
| MS.gene44956.t1 | MTR_4g132320 | 61.556 | 437 | 166 | 1 | 11 | 445 | 11 | 447 | 0.0 | 551 |
| MS.gene44956.t1 | MTR_4g049390 | 59.859 | 426 | 169 | 1 | 22 | 445 | 18 | 443 | 0.0 | 542 |
| MS.gene44956.t1 | MTR_4g048350 | 59.859 | 426 | 168 | 2 | 22 | 445 | 18 | 442 | 0.0 | 535 |
| MS.gene44956.t1 | MTR_4g075690 | 58.933 | 431 | 172 | 2 | 15 | 440 | 10 | 440 | 0.0 | 530 |
| MS.gene44956.t1 | MTR_4g075690 | 58.933 | 431 | 172 | 2 | 15 | 440 | 10 | 440 | 0.0 | 530 |
| MS.gene44956.t1 | MTR_2g088080 | 58.758 | 451 | 182 | 2 | 26 | 474 | 25 | 473 | 0.0 | 528 |
| MS.gene44956.t1 | MTR_3g115050 | 58.296 | 446 | 179 | 2 | 7 | 445 | 1 | 446 | 0.0 | 523 |
| MS.gene44956.t1 | MTR_1g026410 | 57.823 | 441 | 184 | 1 | 7 | 445 | 5 | 445 | 4.43e-180 | 515 |
| MS.gene44956.t1 | MTR_4g083190 | 53.304 | 454 | 197 | 5 | 1 | 444 | 1 | 449 | 1.77e-164 | 476 |
| MS.gene44956.t1 | MTR_3g083440 | 51.876 | 453 | 201 | 6 | 13 | 455 | 8 | 453 | 4.53e-159 | 462 |
| MS.gene44956.t1 | MTR_3g083430 | 51.876 | 453 | 201 | 6 | 13 | 455 | 8 | 453 | 8.99e-159 | 461 |
| MS.gene44956.t1 | MTR_3g083390 | 51.876 | 453 | 201 | 6 | 13 | 455 | 8 | 453 | 9.60e-159 | 461 |
| MS.gene44956.t1 | MTR_3g083400 | 51.656 | 453 | 202 | 6 | 13 | 455 | 8 | 453 | 9.31e-158 | 459 |
| MS.gene44956.t1 | MTR_3g083450 | 52.715 | 442 | 193 | 5 | 24 | 455 | 19 | 454 | 2.40e-157 | 457 |
| MS.gene44956.t1 | MTR_4g083210 | 52.632 | 437 | 200 | 4 | 14 | 444 | 8 | 443 | 1.41e-155 | 453 |
| MS.gene44956.t1 | MTR_2g088080 | 58.122 | 394 | 161 | 2 | 83 | 474 | 1 | 392 | 4.53e-153 | 443 |
| MS.gene44956.t1 | MTR_3g083410 | 50.725 | 414 | 188 | 5 | 52 | 455 | 10 | 417 | 9.43e-140 | 411 |
| MS.gene44956.t1 | MTR_4g101650 | 47.323 | 467 | 219 | 8 | 1 | 445 | 1 | 462 | 2.24e-137 | 408 |
| MS.gene44956.t1 | MTR_7g051440 | 50.000 | 442 | 192 | 7 | 28 | 445 | 26 | 462 | 1.29e-135 | 404 |
| MS.gene44956.t1 | MTR_3g008580 | 47.796 | 431 | 202 | 6 | 37 | 445 | 35 | 464 | 7.08e-135 | 402 |
| MS.gene44956.t1 | MTR_1g090707 | 46.222 | 450 | 226 | 7 | 9 | 445 | 3 | 449 | 4.18e-125 | 377 |
| MS.gene44956.t1 | MTR_4g133150 | 53.171 | 205 | 75 | 3 | 138 | 338 | 24 | 211 | 1.33e-64 | 208 |
| MS.gene44956.t1 | MTR_3g101640 | 29.302 | 430 | 242 | 15 | 6 | 394 | 8 | 416 | 2.86e-38 | 147 |
| MS.gene44956.t1 | MTR_4g015120 | 29.097 | 299 | 195 | 5 | 14 | 296 | 7 | 304 | 2.15e-37 | 144 |
| MS.gene44956.t1 | MTR_5g020600 | 28.029 | 421 | 255 | 15 | 8 | 396 | 11 | 415 | 1.85e-36 | 142 |
| MS.gene44956.t1 | MTR_5g069680 | 28.365 | 416 | 256 | 10 | 7 | 396 | 8 | 407 | 1.59e-35 | 139 |
| MS.gene44956.t1 | MTR_8g091390 | 27.564 | 468 | 279 | 14 | 21 | 440 | 24 | 479 | 1.90e-35 | 139 |
| MS.gene44956.t1 | MTR_5g020620 | 28.398 | 412 | 249 | 15 | 16 | 396 | 14 | 410 | 1.37e-34 | 136 |
| MS.gene44956.t1 | MTR_3g101635 | 27.047 | 403 | 234 | 12 | 32 | 393 | 28 | 411 | 2.40e-33 | 133 |
| MS.gene44956.t1 | MTR_3g462760 | 26.329 | 395 | 264 | 8 | 31 | 406 | 26 | 412 | 3.47e-32 | 129 |
| MS.gene44956.t1 | MTR_5g083360 | 29.180 | 305 | 191 | 7 | 45 | 325 | 38 | 341 | 4.94e-32 | 129 |
| MS.gene44956.t1 | MTR_3g078740 | 25.956 | 497 | 285 | 18 | 15 | 440 | 13 | 497 | 5.16e-32 | 129 |
| MS.gene44956.t1 | MTR_3g071890 | 28.527 | 319 | 206 | 7 | 9 | 308 | 13 | 328 | 2.46e-31 | 127 |
| MS.gene44956.t1 | MTR_7g065970 | 28.161 | 348 | 223 | 9 | 7 | 336 | 3 | 341 | 4.64e-31 | 126 |
| MS.gene44956.t1 | MTR_3g078700 | 26.201 | 458 | 287 | 14 | 13 | 440 | 11 | 447 | 3.76e-30 | 123 |
| MS.gene44956.t1 | MTR_7g065980 | 26.056 | 426 | 273 | 13 | 13 | 408 | 12 | 425 | 5.07e-30 | 123 |
| MS.gene44956.t1 | MTR_5g081810 | 25.858 | 379 | 241 | 11 | 45 | 396 | 13 | 378 | 5.37e-29 | 120 |
| MS.gene44956.t1 | MTR_5g073210 | 26.667 | 315 | 210 | 8 | 9 | 306 | 4 | 314 | 4.98e-28 | 117 |
| MS.gene44956.t1 | MTR_3g078730 | 25.877 | 456 | 290 | 15 | 13 | 440 | 11 | 446 | 4.31e-26 | 111 |
| MS.gene44956.t1 | MTR_2g008330 | 25.282 | 443 | 285 | 14 | 11 | 418 | 17 | 448 | 2.47e-25 | 109 |
| MS.gene44956.t1 | MTR_4g019225 | 27.985 | 268 | 180 | 4 | 34 | 289 | 29 | 295 | 6.42e-24 | 105 |
| MS.gene44956.t1 | MTR_7g062250 | 25.993 | 277 | 190 | 5 | 1 | 265 | 6 | 279 | 8.54e-24 | 105 |
| MS.gene44956.t1 | MTR_8g027375 | 24.096 | 332 | 228 | 7 | 1 | 309 | 1 | 331 | 9.22e-24 | 104 |
| MS.gene44956.t1 | MTR_7g458880 | 22.393 | 326 | 229 | 8 | 1 | 303 | 1 | 325 | 6.39e-23 | 102 |
| MS.gene44956.t1 | MTR_7g058690 | 24.490 | 294 | 200 | 8 | 31 | 303 | 33 | 325 | 1.09e-22 | 101 |
| MS.gene44956.t1 | MTR_7g060460 | 22.222 | 279 | 202 | 5 | 1 | 265 | 1 | 278 | 1.04e-21 | 98.6 |
| MS.gene44956.t1 | MTR_4g064530 | 23.197 | 319 | 225 | 7 | 8 | 307 | 19 | 336 | 2.75e-21 | 97.1 |
| MS.gene44956.t1 | MTR_4g064530 | 23.197 | 319 | 225 | 7 | 8 | 307 | 19 | 336 | 2.79e-21 | 97.4 |
| MS.gene44956.t1 | MTR_7g062310 | 25.940 | 266 | 183 | 6 | 31 | 283 | 47 | 311 | 4.80e-21 | 96.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44956.t1 | AT5G66920 | 73.206 | 418 | 112 | 0 | 23 | 440 | 29 | 446 | 0.0 | 651 |
| MS.gene44956.t1 | AT4G37160 | 63.004 | 446 | 163 | 2 | 1 | 444 | 1 | 446 | 0.0 | 577 |
| MS.gene44956.t1 | AT4G37160 | 63.004 | 446 | 163 | 2 | 1 | 444 | 1 | 446 | 0.0 | 575 |
| MS.gene44956.t1 | AT2G23630 | 64.637 | 427 | 150 | 1 | 20 | 445 | 24 | 450 | 0.0 | 563 |
| MS.gene44956.t1 | AT2G23630 | 64.637 | 427 | 150 | 1 | 20 | 445 | 19 | 445 | 0.0 | 562 |
| MS.gene44956.t1 | AT4G22010 | 58.482 | 448 | 178 | 3 | 1 | 445 | 1 | 443 | 0.0 | 546 |
| MS.gene44956.t1 | AT1G21850 | 55.484 | 465 | 200 | 5 | 13 | 474 | 10 | 470 | 0.0 | 518 |
| MS.gene44956.t1 | AT1G76160 | 56.643 | 429 | 185 | 1 | 13 | 440 | 10 | 438 | 8.25e-180 | 514 |
| MS.gene44956.t1 | AT1G21860 | 53.911 | 473 | 202 | 5 | 14 | 474 | 12 | 480 | 1.92e-178 | 511 |
| MS.gene44956.t1 | AT1G41830 | 56.876 | 429 | 183 | 2 | 14 | 440 | 11 | 439 | 1.86e-177 | 509 |
| MS.gene44956.t1 | AT4G38420 | 53.215 | 451 | 197 | 4 | 14 | 456 | 13 | 457 | 5.51e-168 | 483 |
| MS.gene44956.t1 | AT4G38420 | 54.253 | 435 | 191 | 3 | 14 | 440 | 13 | 447 | 5.69e-168 | 481 |
| MS.gene44956.t1 | AT4G38420 | 53.215 | 451 | 197 | 4 | 14 | 456 | 13 | 457 | 1.26e-166 | 481 |
| MS.gene44956.t1 | AT1G55570 | 54.586 | 447 | 191 | 4 | 9 | 444 | 7 | 452 | 2.10e-166 | 481 |
| MS.gene44956.t1 | AT3G13400 | 55.381 | 446 | 186 | 5 | 10 | 444 | 6 | 449 | 5.39e-164 | 474 |
| MS.gene44956.t1 | AT3G13400 | 55.381 | 446 | 186 | 5 | 10 | 444 | 6 | 449 | 5.39e-164 | 474 |
| MS.gene44956.t1 | AT1G55560 | 54.139 | 447 | 190 | 5 | 10 | 444 | 5 | 448 | 1.65e-163 | 473 |
| MS.gene44956.t1 | AT3G13390 | 56.148 | 431 | 173 | 6 | 27 | 444 | 24 | 451 | 2.41e-161 | 468 |
| MS.gene44956.t1 | AT5G48450 | 52.318 | 453 | 203 | 6 | 5 | 445 | 3 | 454 | 1.55e-155 | 454 |
| MS.gene44956.t1 | AT5G48450 | 52.318 | 453 | 203 | 6 | 5 | 445 | 3 | 454 | 2.05e-155 | 455 |
| MS.gene44956.t1 | AT4G28090 | 51.991 | 427 | 195 | 6 | 21 | 440 | 19 | 442 | 2.44e-153 | 447 |
| MS.gene44956.t1 | AT4G12420 | 48.240 | 483 | 220 | 8 | 14 | 474 | 8 | 482 | 2.84e-149 | 438 |
| MS.gene44956.t1 | AT4G12420 | 48.240 | 483 | 220 | 8 | 14 | 474 | 8 | 482 | 2.84e-149 | 438 |
| MS.gene44956.t1 | AT5G51480 | 48.624 | 436 | 203 | 6 | 26 | 440 | 23 | 458 | 5.61e-141 | 417 |
| MS.gene44956.t1 | AT4G25240 | 47.071 | 495 | 231 | 11 | 1 | 474 | 1 | 485 | 4.90e-138 | 410 |
| MS.gene44956.t1 | AT4G25240 | 47.071 | 495 | 231 | 11 | 1 | 474 | 1 | 485 | 4.90e-138 | 410 |
| MS.gene44956.t1 | AT1G75790 | 47.020 | 453 | 218 | 6 | 10 | 445 | 1 | 448 | 6.56e-135 | 400 |
| MS.gene44956.t1 | AT4G39830 | 29.051 | 506 | 289 | 15 | 11 | 461 | 16 | 506 | 2.99e-44 | 164 |
| MS.gene44956.t1 | AT5G21105 | 28.472 | 432 | 261 | 13 | 3 | 397 | 8 | 428 | 1.41e-41 | 156 |
| MS.gene44956.t1 | AT5G21105 | 28.472 | 432 | 261 | 13 | 3 | 397 | 8 | 428 | 2.29e-41 | 156 |
| MS.gene44956.t1 | AT2G38080 | 26.869 | 428 | 265 | 13 | 6 | 406 | 8 | 414 | 2.11e-37 | 144 |
| MS.gene44956.t1 | AT5G58910 | 28.375 | 437 | 266 | 13 | 6 | 410 | 7 | 428 | 6.21e-37 | 143 |
| MS.gene44956.t1 | AT5G58910 | 28.604 | 437 | 264 | 14 | 6 | 410 | 7 | 427 | 5.09e-36 | 140 |
| MS.gene44956.t1 | AT5G21100 | 28.534 | 382 | 223 | 11 | 34 | 380 | 27 | 393 | 5.59e-36 | 140 |
| MS.gene44956.t1 | AT2G30210 | 29.126 | 309 | 196 | 8 | 8 | 298 | 7 | 310 | 1.39e-32 | 130 |
| MS.gene44956.t1 | AT5G58910 | 28.894 | 398 | 231 | 13 | 45 | 410 | 7 | 384 | 3.42e-31 | 126 |
| MS.gene44956.t1 | AT5G09360 | 25.658 | 456 | 279 | 12 | 15 | 427 | 22 | 460 | 4.43e-31 | 126 |
| MS.gene44956.t1 | AT4G39830 | 28.878 | 419 | 229 | 14 | 97 | 461 | 8 | 411 | 1.50e-30 | 124 |
| MS.gene44956.t1 | AT4G39830 | 28.878 | 419 | 229 | 14 | 97 | 461 | 6 | 409 | 1.68e-30 | 124 |
| MS.gene44956.t1 | AT5G01190 | 26.521 | 411 | 263 | 11 | 14 | 396 | 9 | 408 | 1.08e-29 | 122 |
| MS.gene44956.t1 | AT5G03260 | 26.265 | 415 | 267 | 13 | 8 | 396 | 5 | 406 | 1.38e-29 | 122 |
| MS.gene44956.t1 | AT5G05390 | 25.796 | 314 | 213 | 6 | 16 | 312 | 14 | 324 | 7.22e-29 | 120 |
| MS.gene44956.t1 | AT5G07130 | 29.180 | 305 | 191 | 10 | 14 | 298 | 9 | 308 | 1.73e-28 | 119 |
| MS.gene44956.t1 | AT5G01190 | 27.467 | 375 | 234 | 10 | 50 | 396 | 30 | 394 | 1.18e-27 | 116 |
| MS.gene44956.t1 | AT2G40370 | 26.518 | 313 | 210 | 6 | 9 | 304 | 7 | 316 | 1.79e-27 | 115 |
| MS.gene44956.t1 | AT3G09220 | 26.254 | 339 | 224 | 9 | 13 | 330 | 9 | 342 | 9.74e-27 | 114 |
| MS.gene44956.t1 | AT5G48100 | 27.451 | 306 | 192 | 9 | 32 | 312 | 23 | 323 | 1.51e-26 | 113 |
| MS.gene44956.t1 | AT5G01050 | 28.063 | 253 | 165 | 4 | 42 | 283 | 39 | 285 | 2.93e-26 | 112 |
| MS.gene44956.t1 | AT4G39830 | 27.685 | 419 | 221 | 14 | 97 | 461 | 8 | 398 | 6.54e-26 | 110 |
| MS.gene44956.t1 | AT2G46570 | 26.562 | 256 | 175 | 4 | 31 | 274 | 32 | 286 | 6.23e-25 | 108 |
| MS.gene44956.t1 | AT1G18140 | 23.630 | 292 | 197 | 7 | 31 | 301 | 29 | 315 | 1.57e-24 | 107 |
| MS.gene44956.t1 | AT5G01040 | 28.049 | 246 | 160 | 4 | 42 | 276 | 39 | 278 | 2.88e-24 | 106 |
| MS.gene44956.t1 | AT5G60020 | 24.265 | 272 | 190 | 5 | 14 | 270 | 5 | 275 | 7.13e-23 | 102 |
| MS.gene44956.t1 | AT5G60020 | 24.265 | 272 | 190 | 5 | 14 | 270 | 5 | 275 | 1.03e-22 | 101 |
| MS.gene44956.t1 | AT5G60020 | 25.641 | 234 | 161 | 4 | 49 | 270 | 11 | 243 | 3.26e-21 | 97.1 |
| MS.gene44956.t1 | AT2G29130 | 25.455 | 275 | 190 | 6 | 4 | 265 | 3 | 275 | 6.21e-21 | 96.3 |
| MS.gene44956.t1 | AT5G21105 | 30.570 | 193 | 122 | 5 | 208 | 397 | 54 | 237 | 1.99e-17 | 84.3 |
| MS.gene44956.t1 | AT2G46570 | 28.643 | 199 | 129 | 4 | 88 | 274 | 4 | 201 | 7.45e-17 | 83.2 |
| MS.gene44956.t1 | AT3G09220 | 27.530 | 247 | 155 | 8 | 104 | 330 | 3 | 245 | 1.22e-15 | 79.7 |
| MS.gene44956.t1 | AT5G07130 | 28.000 | 225 | 139 | 8 | 94 | 298 | 2 | 223 | 3.37e-15 | 78.2 |
| MS.gene44956.t1 | AT5G07130 | 28.000 | 225 | 139 | 8 | 94 | 298 | 2 | 223 | 3.37e-15 | 78.2 |
Find 120 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGACCTTGATCACCATTTA+TGG | 0.129038 | 8.1:-28463469 | None:intergenic |
| AATATGGTAGTCCAAGAATT+TGG | 0.193748 | 8.1:-28465189 | None:intergenic |
| TTTGATAAATGGTCAATTTC+CGG | 0.212336 | 8.1:+28462441 | MS.gene44956:CDS |
| TCTCAATCTTGTCAACAAAT+TGG | 0.240502 | 8.1:+28462501 | MS.gene44956:CDS |
| GTCCTTAGGAGATTGGTTTA+AGG | 0.256327 | 8.1:-28463771 | None:intergenic |
| GCTAATACAATTGTCTTTGT+AGG | 0.261689 | 8.1:-28464415 | None:intergenic |
| TTTACATGGACTGTTACTTA+TGG | 0.266390 | 8.1:+28462061 | MS.gene44956:CDS |
| CAAGGGAGTCATATATGTTT+TGG | 0.267120 | 8.1:-28463712 | None:intergenic |
| TCATGGCAAGATGGGGTATT+AGG | 0.271766 | 8.1:+28462675 | MS.gene44956:CDS |
| AATTCAGCACCATTAATTAA+TGG | 0.272587 | 8.1:+28464439 | MS.gene44956:CDS |
| CAAGCTCATTCAACCATAAA+TGG | 0.290434 | 8.1:+28463456 | MS.gene44956:CDS |
| GCTGCTACATGCTGTTGTTT+TGG | 0.293329 | 8.1:+28461991 | MS.gene44956:CDS |
| GATAGGTGTACCCAAATTCT+TGG | 0.312058 | 8.1:+28465178 | MS.gene44956:intron |
| TTAAGAGAGTCATTGGATTC+TGG | 0.317167 | 8.1:+28463393 | MS.gene44956:CDS |
| AACTCTCACTCCCCTGCTTC+TGG | 0.317235 | 8.1:+28463863 | MS.gene44956:CDS |
| GCTGATTACTTCAACATTCC+TGG | 0.318878 | 8.1:+28464523 | MS.gene44956:CDS |
| AAATTCTTGGACTACCATAT+TGG | 0.318980 | 8.1:+28465191 | MS.gene44956:CDS |
| TTGGGCAGCAATTATACCTT+AGG | 0.319818 | 8.1:+28465274 | MS.gene44956:CDS |
| CATAAAGCAGCTGGAGGGTT+TGG | 0.320330 | 8.1:+28462795 | MS.gene44956:CDS |
| CCACAAGGATCATACCATTA+TGG | 0.335908 | 8.1:+28464382 | MS.gene44956:CDS |
| GACTACCATATTGGTGTCAT+TGG | 0.341712 | 8.1:+28465200 | MS.gene44956:CDS |
| ATCCAAAGCATTCCTTCTAA+TGG | 0.345085 | 8.1:+28464565 | MS.gene44956:CDS |
| TGGGTTTGGCCTTGCAGCAT+TGG | 0.345848 | 8.1:-28464362 | None:intergenic |
| TAATTTGAGTTTGGAGGTAT+TGG | 0.354013 | 8.1:-28462708 | None:intergenic |
| TTGATAAATGGTCAATTTCC+GGG | 0.362688 | 8.1:+28462442 | MS.gene44956:CDS |
| TGGTATGATCCTTGTGGGTT+TGG | 0.366351 | 8.1:-28464376 | None:intergenic |
| TGATACAAGCTAGAAGCTTC+AGG | 0.369255 | 8.1:+28463927 | MS.gene44956:CDS |
| ACAGGCATTAAGAGAGTCAT+TGG | 0.370974 | 8.1:+28463386 | MS.gene44956:intron |
| TGGGCAATCAGCTGCTGTTT+TGG | 0.371637 | 8.1:+28463745 | MS.gene44956:CDS |
| GGAATCTGAGGTCTGCAATC+TGG | 0.372739 | 8.1:+28465238 | MS.gene44956:CDS |
| GAATCCACATTGAATATTCC+AGG | 0.374453 | 8.1:-28464541 | None:intergenic |
| GTATCAAAGACCAATGATAT+TGG | 0.380499 | 8.1:-28463910 | None:intergenic |
| ATGCAATCTTGGCATCTTGA+TGG | 0.383813 | 8.1:+28464670 | MS.gene44956:CDS |
| AAATTACACATACAAGTTTC+AGG | 0.383895 | 8.1:+28462725 | MS.gene44956:CDS |
| GCTTTATGAAGTTGAGTTGA+TGG | 0.387011 | 8.1:-28462780 | None:intergenic |
| TCACTTTGCTCATTGGTGAT+TGG | 0.396844 | 8.1:+28462880 | MS.gene44956:CDS |
| CATAATGGTATGATCCTTGT+GGG | 0.398204 | 8.1:-28464381 | None:intergenic |
| TGTAATAGTCCTTAGGAGAT+TGG | 0.399386 | 8.1:-28463778 | None:intergenic |
| ATGAAAATACAATGCAATCT+TGG | 0.401696 | 8.1:+28464659 | MS.gene44956:CDS |
| TTGTATGTGTAATTTGAGTT+TGG | 0.405328 | 8.1:-28462717 | None:intergenic |
| GACCATTAGAAGGAATGCTT+TGG | 0.417901 | 8.1:-28464567 | None:intergenic |
| TCGATTAACTTCAGAATTCA+AGG | 0.430963 | 8.1:+28463647 | MS.gene44956:CDS |
| ACTCACCAAGTGAGTAGAAA+TGG | 0.431555 | 8.1:-28462529 | None:intergenic |
| ATATGGTAGTCCAAGAATTT+GGG | 0.432178 | 8.1:-28465188 | None:intergenic |
| ATCTGGGAACGACAATATCT+TGG | 0.433578 | 8.1:+28465255 | MS.gene44956:CDS |
| GGAGATTTCACTTTGCTCAT+TGG | 0.438918 | 8.1:+28462873 | MS.gene44956:CDS |
| TCCACTTGGTACTCCTCAGC+AGG | 0.446386 | 8.1:+28462093 | MS.gene44956:CDS |
| ACATATGCAGGACCATTAGA+AGG | 0.453110 | 8.1:-28464577 | None:intergenic |
| CTAGGCAAAGGACCAGAAGC+AGG | 0.457793 | 8.1:-28463875 | None:intergenic |
| ATAAAATCATGGAGAAAAGT+TGG | 0.459162 | 8.1:-28464616 | None:intergenic |
| GACCAATGATATTGGTAAGC+AGG | 0.459227 | 8.1:-28463902 | None:intergenic |
| AGCAAAGTGAAATCTCCATC+AGG | 0.461466 | 8.1:-28462867 | None:intergenic |
| TGGGCAGCAATTATACCTTA+GGG | 0.473395 | 8.1:+28465275 | MS.gene44956:CDS |
| GTTGTCCAATGACACCAATA+TGG | 0.477039 | 8.1:-28465205 | None:intergenic |
| CCATAATGGTATGATCCTTG+TGG | 0.478583 | 8.1:-28464382 | None:intergenic |
| ACCAACCATTTCTACTCACT+TGG | 0.479632 | 8.1:+28462524 | MS.gene44956:CDS |
| GAATCTGAGGTCTGCAATCT+GGG | 0.481200 | 8.1:+28465239 | MS.gene44956:CDS |
| GTTTGGAGGTATTGGACAGT+TGG | 0.481575 | 8.1:-28462700 | None:intergenic |
| TATTGGTAAGCAGGAGGACT+AGG | 0.484687 | 8.1:-28463893 | None:intergenic |
| TCTCCATCAGGGTATGGATA+AGG | 0.485055 | 8.1:-28462855 | None:intergenic |
| CCTGATGGTCTGCTCATCAA+TGG | 0.488482 | 8.1:+28463432 | MS.gene44956:CDS |
| TCAACCATAAATGGTGATCA+AGG | 0.489856 | 8.1:+28463465 | MS.gene44956:CDS |
| GTAGGTTCCAATCTGATCCT+TGG | 0.495022 | 8.1:-28462748 | None:intergenic |
| CCATTGATGAGCAGACCATC+AGG | 0.498849 | 8.1:-28463432 | None:intergenic |
| TTTCAGGCCAAGGATCAGAT+TGG | 0.499961 | 8.1:+28462741 | MS.gene44956:CDS |
| AAACAAGCTCAATAAAATCA+TGG | 0.502856 | 8.1:-28464627 | None:intergenic |
| GCAACGATGTAATAGTCCTT+AGG | 0.503255 | 8.1:-28463785 | None:intergenic |
| CTCCTGCTTACCAATATCAT+TGG | 0.509305 | 8.1:+28463900 | MS.gene44956:CDS |
| TATGGAACTCTTTCTCCACT+TGG | 0.515733 | 8.1:+28462079 | MS.gene44956:CDS |
| TATGTGTAATTTGAGTTTGG+AGG | 0.515904 | 8.1:-28462714 | None:intergenic |
| GTGAAATCTCCATCAGGGTA+TGG | 0.518841 | 8.1:-28462861 | None:intergenic |
| ATTGCCCAACATGGACATCA+AGG | 0.521623 | 8.1:-28463730 | None:intergenic |
| CACATACAAGTTTCAGGCCA+AGG | 0.523154 | 8.1:+28462731 | MS.gene44956:CDS |
| TCTCTAGTGCAAGCAGAAGA+TGG | 0.523779 | 8.1:+28462028 | MS.gene44956:CDS |
| ACTCAACTTCATAAAGCAGC+TGG | 0.524206 | 8.1:+28462786 | MS.gene44956:CDS |
| TCTGGGAACGACAATATCTT+GGG | 0.527163 | 8.1:+28465256 | MS.gene44956:CDS |
| AATCTAGGTTACCTTATGGT+TGG | 0.545747 | 8.1:-28462910 | None:intergenic |
| AACCTTAAACCAATCTCCTA+AGG | 0.547455 | 8.1:+28463769 | MS.gene44956:CDS |
| CATTGGACAACCAAGGTATG+TGG | 0.549670 | 8.1:+28465217 | MS.gene44956:CDS |
| GACTCCCTTGATGTCCATGT+TGG | 0.550780 | 8.1:+28463725 | MS.gene44956:CDS |
| TATGTTCAGAATCTCAAATG+TGG | 0.551025 | 8.1:+28463613 | MS.gene44956:CDS |
| TTGGTACAAGACCAACCATA+AGG | 0.552905 | 8.1:+28462899 | MS.gene44956:CDS |
| ACTAAGTCTAGTTGAGGCCC+CGG | 0.554159 | 8.1:-28462460 | None:intergenic |
| ACCTCAGATTCCACATACCT+TGG | 0.554697 | 8.1:-28465227 | None:intergenic |
| ACTCCCTTGATGTCCATGTT+GGG | 0.560495 | 8.1:+28463726 | MS.gene44956:CDS |
| CTAAAACTAGTCGAGGTGGA+AGG | 0.565955 | 8.1:+28463677 | MS.gene44956:CDS |
| GTTCCTTATCCATACCCTGA+TGG | 0.567591 | 8.1:+28462852 | MS.gene44956:CDS |
| ATTACGTTACGCTGTTAACA+AGG | 0.568438 | 8.1:+28464465 | MS.gene44956:CDS |
| CAGCAGCTGATTGCCCAACA+TGG | 0.571608 | 8.1:-28463739 | None:intergenic |
| ACTGAGGTAGCTACATATGC+AGG | 0.578704 | 8.1:-28464589 | None:intergenic |
| TAGGCAAAGGACCAGAAGCA+GGG | 0.587628 | 8.1:-28463874 | None:intergenic |
| ATCTAACAGCCAATGCTGCA+AGG | 0.588565 | 8.1:+28464353 | MS.gene44956:CDS |
| CAACTTCATAAAGCAGCTGG+AGG | 0.592120 | 8.1:+28462789 | MS.gene44956:CDS |
| AAGTAATCAGCAAGCTTGAG+TGG | 0.597051 | 8.1:-28464511 | None:intergenic |
| TAAAACTAGTCGAGGTGGAA+GGG | 0.600806 | 8.1:+28463678 | MS.gene44956:CDS |
| TTGCCCAACATGGACATCAA+GGG | 0.613496 | 8.1:-28463729 | None:intergenic |
| AACTTCATAAAGCAGCTGGA+GGG | 0.614826 | 8.1:+28462790 | MS.gene44956:CDS |
| ATGTTCAGAATCTCAAATGT+GGG | 0.615138 | 8.1:+28463614 | MS.gene44956:CDS |
| AGGCAAAGGACCAGAAGCAG+GGG | 0.619105 | 8.1:-28463873 | None:intergenic |
| TTAGTTACTAAGTCTAGTTG+AGG | 0.619241 | 8.1:-28462466 | None:intergenic |
| TGATAAATGGTCAATTTCCG+GGG | 0.623543 | 8.1:+28462443 | MS.gene44956:CDS |
| CACCCTAAAACTAGTCGAGG+TGG | 0.626026 | 8.1:+28463673 | MS.gene44956:CDS |
| GCAAAGTGAAATCTCCATCA+GGG | 0.626543 | 8.1:-28462866 | None:intergenic |
| ACCAAGGTATGTGGAATCTG+AGG | 0.626802 | 8.1:+28465226 | MS.gene44956:CDS |
| CTAGGAATGGCATTAAACAA+AGG | 0.626838 | 8.1:+28462646 | MS.gene44956:intron |
| AAATCTCTAGCATTTCCTGA+TGG | 0.629511 | 8.1:+28463417 | MS.gene44956:CDS |
| TGGTGTATCAGAGTTAACAT+AGG | 0.634021 | 8.1:-28464491 | None:intergenic |
| AGTCTATTACACACCTGCTG+AGG | 0.644359 | 8.1:-28462106 | None:intergenic |
| ACCAAGTGAGTAGAAATGGT+TGG | 0.645111 | 8.1:-28462525 | None:intergenic |
| CATTCCTGGAATATTCAATG+TGG | 0.649712 | 8.1:+28464537 | MS.gene44956:CDS |
| CTTAGTAACTAATGAAAACG+TGG | 0.658482 | 8.1:+28462477 | MS.gene44956:CDS |
| TAAGCAGGAGGACTAGGCAA+AGG | 0.659557 | 8.1:-28463887 | None:intergenic |
| ACACACCCTAAAACTAGTCG+AGG | 0.663305 | 8.1:+28463670 | MS.gene44956:CDS |
| ACCTGCTGAGGAGTACCAAG+TGG | 0.666374 | 8.1:-28462094 | None:intergenic |
| GCTGCAAGGCCAAACCCACA+AGG | 0.670571 | 8.1:+28464367 | MS.gene44956:CDS |
| CAATGATATTGGTAAGCAGG+AGG | 0.672778 | 8.1:-28463899 | None:intergenic |
| AGTTGATGGAAAGTATGTGT+AGG | 0.674866 | 8.1:-28462766 | None:intergenic |
| GAGAAAAGTTGGCAATACTG+AGG | 0.682631 | 8.1:-28464605 | None:intergenic |
| AAGGATTCTTACAGCAACTG+CGG | 0.701532 | 8.1:+28463826 | MS.gene44956:CDS |
| TTGGTGTCATTGGACAACCA+AGG | 0.743917 | 8.1:+28465210 | MS.gene44956:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTTCTCAAAAATAAAG+TGG | + | chr8.1:28463293-28463312 | MS.gene44956:intron | 15.0% |
| !! | AATTTAATGAAAAAGTTGAA+TGG | - | chr8.1:28463542-28463561 | None:intergenic | 15.0% |
| !! | ATATTGATATATGAAATCAT+AGG | - | chr8.1:28462260-28462279 | None:intergenic | 15.0% |
| !! | TAAATTATATATTCTTCTCT+TGG | - | chr8.1:28464866-28464885 | None:intergenic | 15.0% |
| !! | TATAAGATATACAATAGATT+TGG | + | chr8.1:28465048-28465067 | MS.gene44956:intron | 15.0% |
| !! | TATTGATATATGAAATCATA+GGG | - | chr8.1:28462259-28462278 | None:intergenic | 15.0% |
| !! | TTACAAATGTTAATATCATA+TGG | - | chr8.1:28465115-28465134 | None:intergenic | 15.0% |
| !!! | ATTGCTTAAAATTGTTTTAA+GGG | + | chr8.1:28464779-28464798 | MS.gene44956:intron | 15.0% |
| !!! | ATTTGTAATATGTTATCTTT+TGG | + | chr8.1:28465127-28465146 | MS.gene44956:intron | 15.0% |
| !!! | TAACATTTTTATTGTAAACT+AGG | + | chr8.1:28462628-28462647 | MS.gene44956:intron | 15.0% |
| !!! | TATTGCTTAAAATTGTTTTA+AGG | + | chr8.1:28464778-28464797 | MS.gene44956:intron | 15.0% |
| !!! | TCTATATTTTTTATTTCAGA+TGG | + | chr8.1:28464329-28464348 | MS.gene44956:intron | 15.0% |
| !! | AAGCAAAATGCAAATAAAAA+AGG | - | chr8.1:28464726-28464745 | None:intergenic | 20.0% |
| !! | AGAACATAAAGATGAATATT+AGG | - | chr8.1:28463360-28463379 | None:intergenic | 20.0% |
| !! | ATAAAAAATGTGATGTTAAG+TGG | + | chr8.1:28463263-28463282 | MS.gene44956:intron | 20.0% |
| !! | ATAGGTATTTCTTAATTCTA+AGG | + | chr8.1:28463322-28463341 | MS.gene44956:intron | 20.0% |
| !! | ATGGATACTTAAACAAAATT+AGG | - | chr8.1:28463981-28464000 | None:intergenic | 20.0% |
| !! | GATAAATTATTGCAAACTTT+AGG | - | chr8.1:28464307-28464326 | None:intergenic | 20.0% |
| !! | TGAAAATTTAGTAGCTATTA+TGG | - | chr8.1:28464000-28464019 | None:intergenic | 20.0% |
| !! | TGTTCAATTTGTATAGAAAA+TGG | - | chr8.1:28462949-28462968 | None:intergenic | 20.0% |
| !! | TTAAACAAAGGAAAAATTCA+TGG | + | chr8.1:28462658-28462677 | MS.gene44956:CDS | 20.0% |
| !!! | AAGATTTACTATTTTACTAG+AGG | + | chr8.1:28462148-28462167 | MS.gene44956:intron | 20.0% |
| !!! | ACTAGAGGTTTTTTTTTTTA+AGG | + | chr8.1:28462163-28462182 | MS.gene44956:intron | 20.0% |
| !!! | ATGGATACAAATATTTTACA+TGG | + | chr8.1:28462047-28462066 | MS.gene44956:CDS | 20.0% |
| !!! | CATTAAATTTGTTTTGCAAA+CGG | + | chr8.1:28463553-28463572 | MS.gene44956:intron | 20.0% |
| !!! | CGTAATTTTCCATTAATTAA+TGG | - | chr8.1:28464451-28464470 | None:intergenic | 20.0% |
| !!! | GTATCTAATTTTTGTATTGA+AGG | - | chr8.1:28464222-28464241 | None:intergenic | 20.0% |
| !!! | TGACATTTTATTTGAGAAAA+TGG | + | chr8.1:28462603-28462622 | MS.gene44956:intron | 20.0% |
| !!! | TTGCTTAAAATTGTTTTAAG+GGG | + | chr8.1:28464780-28464799 | MS.gene44956:intron | 20.0% |
| !!! | TTTGGTACATCATTTTTTTT+AGG | + | chr8.1:28462414-28462433 | MS.gene44956:intron | 20.0% |
| !!! | TTTTAGGTGATTTTGATAAA+TGG | + | chr8.1:28462430-28462449 | MS.gene44956:intron | 20.0% |
| !!! | TTTTTATTGTAAACTAGGAA+TGG | + | chr8.1:28462633-28462652 | MS.gene44956:intron | 20.0% |
| ! | AAACAAGCTCAATAAAATCA+TGG | - | chr8.1:28464630-28464649 | None:intergenic | 25.0% |
| ! | AAATTACACATACAAGTTTC+AGG | + | chr8.1:28462725-28462744 | MS.gene44956:CDS | 25.0% |
| ! | AATTCAGCACCATTAATTAA+TGG | + | chr8.1:28464439-28464458 | MS.gene44956:CDS | 25.0% |
| ! | ATAAAATCATGGAGAAAAGT+TGG | - | chr8.1:28464619-28464638 | None:intergenic | 25.0% |
| ! | ATGAAAATACAATGCAATCT+TGG | + | chr8.1:28464659-28464678 | MS.gene44956:CDS | 25.0% |
| ! | GAATTAAGAAATACCTATTG+AGG | - | chr8.1:28463320-28463339 | None:intergenic | 25.0% |
| ! | TAGAAATCAAACTTTGTACT+CGG | + | chr8.1:28464932-28464951 | MS.gene44956:intron | 25.0% |
| ! | TATTGTGATGATTACAGTTA+TGG | + | chr8.1:28464820-28464839 | MS.gene44956:intron | 25.0% |
| ! | TCAATTTGTATAGAAAATGG+AGG | - | chr8.1:28462946-28462965 | None:intergenic | 25.0% |
| ! | TTTAGTGCAAATGATTAGTA+TGG | - | chr8.1:28464986-28465005 | None:intergenic | 25.0% |
| ! | TTTGATAAATGGTCAATTTC+CGG | + | chr8.1:28462441-28462460 | MS.gene44956:CDS | 25.0% |
| !! | TCTTTATGTTCTGATTTTAC+AGG | + | chr8.1:28463368-28463387 | MS.gene44956:intron | 25.0% |
| !! | TGAATTCTAATCGAAAGTTT+TGG | + | chr8.1:28462396-28462415 | MS.gene44956:intron | 25.0% |
| !! | TTGTATGTGTAATTTGAGTT+TGG | - | chr8.1:28462720-28462739 | None:intergenic | 25.0% |
| !!! | AACTTTAGGTTTGTTGATTT+TGG | - | chr8.1:28464293-28464312 | None:intergenic | 25.0% |
| !!! | ATAGCTACTAAATTTTCAAG+AGG | + | chr8.1:28464002-28464021 | MS.gene44956:intron | 25.0% |
| !!! | ATCTTGATGGTTATGATTTT+TGG | + | chr8.1:28464683-28464702 | MS.gene44956:intron | 25.0% |
| !!! | CATGTTCAATTAGTTGATAA+CGG | - | chr8.1:28464174-28464193 | None:intergenic | 25.0% |
| !!! | TAGGAGTTATTTTTCCATAA+TGG | - | chr8.1:28464399-28464418 | None:intergenic | 25.0% |
| !!! | TCTACTTTTTTGCAAATTCT+AGG | + | chr8.1:28463512-28463531 | MS.gene44956:intron | 25.0% |
| !!! | TCTTGATGGTTATGATTTTT+GGG | + | chr8.1:28464684-28464703 | MS.gene44956:intron | 25.0% |
| !!! | TGCTTAAAATTGTTTTAAGG+GGG | + | chr8.1:28464781-28464800 | MS.gene44956:intron | 25.0% |
| AAAATAAAGTGGACCTCAAT+AGG | + | chr8.1:28463304-28463323 | MS.gene44956:intron | 30.0% | |
| AAAATACTGAGCTTGAAATC+TGG | + | chr8.1:28463128-28463147 | MS.gene44956:intron | 30.0% | |
| AAATTCTTGGACTACCATAT+TGG | + | chr8.1:28465191-28465210 | MS.gene44956:CDS | 30.0% | |
| AACAAGTTTCTTCAGATTTC+AGG | - | chr8.1:28464047-28464066 | None:intergenic | 30.0% | |
| AATATGGTAGTCCAAGAATT+TGG | - | chr8.1:28465192-28465211 | None:intergenic | 30.0% | |
| ATACTTAGTTGCTTACTTTC+AGG | + | chr8.1:28463581-28463600 | MS.gene44956:intron | 30.0% | |
| ATATGGTAGTCCAAGAATTT+GGG | - | chr8.1:28465191-28465210 | None:intergenic | 30.0% | |
| ATGTTCAGAATCTCAAATGT+GGG | + | chr8.1:28463614-28463633 | MS.gene44956:CDS | 30.0% | |
| CAATAGATTTGGATTGTGTA+CGG | + | chr8.1:28465059-28465078 | MS.gene44956:intron | 30.0% | |
| CTTAGTAACTAATGAAAACG+TGG | + | chr8.1:28462477-28462496 | MS.gene44956:CDS | 30.0% | |
| GATGTTAGAAAGTTATGACA+TGG | - | chr8.1:28462972-28462991 | None:intergenic | 30.0% | |
| GCTAATACAATTGTCTTTGT+AGG | - | chr8.1:28464418-28464437 | None:intergenic | 30.0% | |
| GTATCAAAGACCAATGATAT+TGG | - | chr8.1:28463913-28463932 | None:intergenic | 30.0% | |
| TAAGAAAATCAGCACATCAA+CGG | - | chr8.1:28463175-28463194 | None:intergenic | 30.0% | |
| TATATATTCTTCTCTTGGCT+GGG | - | chr8.1:28464861-28464880 | None:intergenic | 30.0% | |
| TATGTTCAGAATCTCAAATG+TGG | + | chr8.1:28463613-28463632 | MS.gene44956:CDS | 30.0% | |
| TCATTTGCACTAAATTTCGA+TGG | + | chr8.1:28464992-28465011 | MS.gene44956:intron | 30.0% | |
| TCGATTAACTTCAGAATTCA+AGG | + | chr8.1:28463647-28463666 | MS.gene44956:CDS | 30.0% | |
| TCTCAATCTTGTCAACAAAT+TGG | + | chr8.1:28462501-28462520 | MS.gene44956:CDS | 30.0% | |
| TGTATGAGTGATGTAAATCT+CGG | - | chr8.1:28464961-28464980 | None:intergenic | 30.0% | |
| TTAGTTACTAAGTCTAGTTG+AGG | - | chr8.1:28462469-28462488 | None:intergenic | 30.0% | |
| TTATATATTCTTCTCTTGGC+TGG | - | chr8.1:28464862-28464881 | None:intergenic | 30.0% | |
| TTGATAAATGGTCAATTTCC+GGG | + | chr8.1:28462442-28462461 | MS.gene44956:CDS | 30.0% | |
| ! | GATCAAATGTCACTCTTTTA+CGG | + | chr8.1:28462193-28462212 | MS.gene44956:intron | 30.0% |
| ! | GATGATTACAGTTATGGTTT+TGG | + | chr8.1:28464826-28464845 | MS.gene44956:intron | 30.0% |
| ! | GCATTGTATTTTCATCATTC+TGG | - | chr8.1:28464654-28464673 | None:intergenic | 30.0% |
| ! | TAATTTGAGTTTGGAGGTAT+TGG | - | chr8.1:28462711-28462730 | None:intergenic | 30.0% |
| ! | TATCTTTTGGTATGCTTACT+TGG | + | chr8.1:28465140-28465159 | MS.gene44956:intron | 30.0% |
| ! | TATGTGTAATTTGAGTTTGG+AGG | - | chr8.1:28462717-28462736 | None:intergenic | 30.0% |
| ! | TTTACATGGACTGTTACTTA+TGG | + | chr8.1:28462061-28462080 | MS.gene44956:CDS | 30.0% |
| !! | AACCAATTTTGATCTGACAT+CGG | + | chr8.1:28464100-28464119 | MS.gene44956:intron | 30.0% |
| !!! | GTTATGATTTTTGGGTTGTA+GGG | + | chr8.1:28464692-28464711 | MS.gene44956:intron | 30.0% |
| AAATCTCTAGCATTTCCTGA+TGG | + | chr8.1:28463417-28463436 | MS.gene44956:CDS | 35.0% | |
| AACCTTAAACCAATCTCCTA+AGG | + | chr8.1:28463769-28463788 | MS.gene44956:CDS | 35.0% | |
| AATCTAGGTTACCTTATGGT+TGG | - | chr8.1:28462913-28462932 | None:intergenic | 35.0% | |
| ACCATAAGGTAACCTAGATT+AGG | + | chr8.1:28462913-28462932 | MS.gene44956:intron | 35.0% | |
| ACCTAATCTAGGTTACCTTA+TGG | - | chr8.1:28462917-28462936 | None:intergenic | 35.0% | |
| AGGAAAAATTCATGGCAAGA+TGG | + | chr8.1:28462666-28462685 | MS.gene44956:CDS | 35.0% | |
| ATATATTCTTCTCTTGGCTG+GGG | - | chr8.1:28464860-28464879 | None:intergenic | 35.0% | |
| ATTACGTTACGCTGTTAACA+AGG | + | chr8.1:28464465-28464484 | MS.gene44956:CDS | 35.0% | |
| CAAGCTCATTCAACCATAAA+TGG | + | chr8.1:28463456-28463475 | MS.gene44956:CDS | 35.0% | |
| CATAATGGTATGATCCTTGT+GGG | - | chr8.1:28464384-28464403 | None:intergenic | 35.0% | |
| CATTCCTGGAATATTCAATG+TGG | + | chr8.1:28464537-28464556 | MS.gene44956:CDS | 35.0% | |
| CTAGGAATGGCATTAAACAA+AGG | + | chr8.1:28462646-28462665 | MS.gene44956:intron | 35.0% | |
| GAAAAATTCATGGCAAGATG+GGG | + | chr8.1:28462668-28462687 | MS.gene44956:CDS | 35.0% | |
| GAATCCACATTGAATATTCC+AGG | - | chr8.1:28464544-28464563 | None:intergenic | 35.0% | |
| GGAAAAATTCATGGCAAGAT+GGG | + | chr8.1:28462667-28462686 | MS.gene44956:CDS | 35.0% | |
| GGTGTGCTACAAATTATGAT+AGG | + | chr8.1:28465161-28465180 | MS.gene44956:intron | 35.0% | |
| TCAACCATAAATGGTGATCA+AGG | + | chr8.1:28463465-28463484 | MS.gene44956:CDS | 35.0% | |
| TCTATTCTCACTGAGCTTAA+TGG | + | chr8.1:28462286-28462305 | MS.gene44956:intron | 35.0% | |
| TGATAAATGGTCAATTTCCG+GGG | + | chr8.1:28462443-28462462 | MS.gene44956:CDS | 35.0% | |
| TGGTGTATCAGAGTTAACAT+AGG | - | chr8.1:28464494-28464513 | None:intergenic | 35.0% | |
| TGTAATAGTCCTTAGGAGAT+TGG | - | chr8.1:28463781-28463800 | None:intergenic | 35.0% | |
| TGTATTGAAGGTCTACTTGA+TGG | - | chr8.1:28464210-28464229 | None:intergenic | 35.0% | |
| TTAAGAGAGTCATTGGATTC+TGG | + | chr8.1:28463393-28463412 | MS.gene44956:CDS | 35.0% | |
| ! | ATCCAAAGCATTCCTTCTAA+TGG | + | chr8.1:28464565-28464584 | MS.gene44956:CDS | 35.0% |
| ! | CAAGGGAGTCATATATGTTT+TGG | - | chr8.1:28463715-28463734 | None:intergenic | 35.0% |
| ! | CTGAGCTTAATGGTCAATTT+TGG | + | chr8.1:28462296-28462315 | MS.gene44956:intron | 35.0% |
| !! | AGTTGATGGAAAGTATGTGT+AGG | - | chr8.1:28462769-28462788 | None:intergenic | 35.0% |
| !! | CTTCAACAAGATTTTCGAGA+AGG | + | chr8.1:28463807-28463826 | MS.gene44956:CDS | 35.0% |
| !! | GCTTTATGAAGTTGAGTTGA+TGG | - | chr8.1:28462783-28462802 | None:intergenic | 35.0% |
| !!! | GGTTATGATTTTTGGGTTGT+AGG | + | chr8.1:28464691-28464710 | MS.gene44956:intron | 35.0% |
| AACTTCATAAAGCAGCTGGA+GGG | + | chr8.1:28462790-28462809 | MS.gene44956:CDS | 40.0% | |
| AAGGATTCTTACAGCAACTG+CGG | + | chr8.1:28463826-28463845 | MS.gene44956:CDS | 40.0% | |
| AAGTAATCAGCAAGCTTGAG+TGG | - | chr8.1:28464514-28464533 | None:intergenic | 40.0% | |
| AATAGTAACCTCTGTTGCGA+AGG | + | chr8.1:28462998-28463017 | MS.gene44956:intron | 40.0% | |
| ACAGGCATTAAGAGAGTCAT+TGG | + | chr8.1:28463386-28463405 | MS.gene44956:intron | 40.0% | |
| ACATATGCAGGACCATTAGA+AGG | - | chr8.1:28464580-28464599 | None:intergenic | 40.0% | |
| ACCAACCATTTCTACTCACT+TGG | + | chr8.1:28462524-28462543 | MS.gene44956:CDS | 40.0% | |
| ACCAAGTGAGTAGAAATGGT+TGG | - | chr8.1:28462528-28462547 | None:intergenic | 40.0% | |
| ACTCAACTTCATAAAGCAGC+TGG | + | chr8.1:28462786-28462805 | MS.gene44956:CDS | 40.0% | |
| ACTCACCAAGTGAGTAGAAA+TGG | - | chr8.1:28462532-28462551 | None:intergenic | 40.0% | |
| AGCAAAGTGAAATCTCCATC+AGG | - | chr8.1:28462870-28462889 | None:intergenic | 40.0% | |
| ATCTGGGAACGACAATATCT+TGG | + | chr8.1:28465255-28465274 | MS.gene44956:CDS | 40.0% | |
| ATGCAATCTTGGCATCTTGA+TGG | + | chr8.1:28464670-28464689 | MS.gene44956:CDS | 40.0% | |
| ATTGAAGGTCTACTTGATGG+TGG | - | chr8.1:28464207-28464226 | None:intergenic | 40.0% | |
| CAATGATATTGGTAAGCAGG+AGG | - | chr8.1:28463902-28463921 | None:intergenic | 40.0% | |
| CCACAAGGATCATACCATTA+TGG | + | chr8.1:28464382-28464401 | MS.gene44956:CDS | 40.0% | |
| CCATAATGGTATGATCCTTG+TGG | - | chr8.1:28464385-28464404 | None:intergenic | 40.0% | |
| CTCCTGCTTACCAATATCAT+TGG | + | chr8.1:28463900-28463919 | MS.gene44956:CDS | 40.0% | |
| CTGACCTTGATCACCATTTA+TGG | - | chr8.1:28463472-28463491 | None:intergenic | 40.0% | |
| GACCAATGATATTGGTAAGC+AGG | - | chr8.1:28463905-28463924 | None:intergenic | 40.0% | |
| GACCATTAGAAGGAATGCTT+TGG | - | chr8.1:28464570-28464589 | None:intergenic | 40.0% | |
| GAGAAAAGTTGGCAATACTG+AGG | - | chr8.1:28464608-28464627 | None:intergenic | 40.0% | |
| GATAGGTGTACCCAAATTCT+TGG | + | chr8.1:28465178-28465197 | MS.gene44956:intron | 40.0% | |
| GCAAAGTGAAATCTCCATCA+GGG | - | chr8.1:28462869-28462888 | None:intergenic | 40.0% | |
| GCAACGATGTAATAGTCCTT+AGG | - | chr8.1:28463788-28463807 | None:intergenic | 40.0% | |
| GCTGATTACTTCAACATTCC+TGG | + | chr8.1:28464523-28464542 | MS.gene44956:CDS | 40.0% | |
| GGAGATTTCACTTTGCTCAT+TGG | + | chr8.1:28462873-28462892 | MS.gene44956:CDS | 40.0% | |
| GGAGGACAAAAACCTAATCT+AGG | - | chr8.1:28462928-28462947 | None:intergenic | 40.0% | |
| GTCCGATGTCAGATCAAAAT+TGG | - | chr8.1:28464105-28464124 | None:intergenic | 40.0% | |
| GTTGTCCAATGACACCAATA+TGG | - | chr8.1:28465208-28465227 | None:intergenic | 40.0% | |
| GTTGTTGGATCGAGATAGAA+CGG | + | chr8.1:28463067-28463086 | MS.gene44956:intron | 40.0% | |
| TAAAACTAGTCGAGGTGGAA+GGG | + | chr8.1:28463678-28463697 | MS.gene44956:CDS | 40.0% | |
| TATGGAACTCTTTCTCCACT+TGG | + | chr8.1:28462079-28462098 | MS.gene44956:CDS | 40.0% | |
| TCTGGGAACGACAATATCTT+GGG | + | chr8.1:28465256-28465275 | MS.gene44956:CDS | 40.0% | |
| TCTTCAGACTCGTGTTACAA+AGG | - | chr8.1:28463223-28463242 | None:intergenic | 40.0% | |
| TGATACAAGCTAGAAGCTTC+AGG | + | chr8.1:28463927-28463946 | MS.gene44956:CDS | 40.0% | |
| TTGGTACAAGACCAACCATA+AGG | + | chr8.1:28462899-28462918 | MS.gene44956:CDS | 40.0% | |
| ! | TCACTTTGCTCATTGGTGAT+TGG | + | chr8.1:28462880-28462899 | MS.gene44956:CDS | 40.0% |
| !! | GACTACCATATTGGTGTCAT+TGG | + | chr8.1:28465200-28465219 | MS.gene44956:CDS | 40.0% |
| !! | GTCCTTAGGAGATTGGTTTA+AGG | - | chr8.1:28463774-28463793 | None:intergenic | 40.0% |
| !!! | TTCCACCTCGACTAGTTTTA+GGG | - | chr8.1:28463678-28463697 | None:intergenic | 40.0% |
| ACACACCCTAAAACTAGTCG+AGG | + | chr8.1:28463670-28463689 | MS.gene44956:CDS | 45.0% | |
| ACCAAGGTATGTGGAATCTG+AGG | + | chr8.1:28465226-28465245 | MS.gene44956:CDS | 45.0% | |
| ACCTCAGATTCCACATACCT+TGG | - | chr8.1:28465230-28465249 | None:intergenic | 45.0% | |
| ACTCCCTTGATGTCCATGTT+GGG | + | chr8.1:28463726-28463745 | MS.gene44956:CDS | 45.0% | |
| ACTGAGGTAGCTACATATGC+AGG | - | chr8.1:28464592-28464611 | None:intergenic | 45.0% | |
| AGTCTATTACACACCTGCTG+AGG | - | chr8.1:28462109-28462128 | None:intergenic | 45.0% | |
| ATCAGCACATCAACGGTCAT+TGG | - | chr8.1:28463168-28463187 | None:intergenic | 45.0% | |
| ATCGAAATCCTTCGCAACAG+AGG | - | chr8.1:28463009-28463028 | None:intergenic | 45.0% | |
| ATCTAACAGCCAATGCTGCA+AGG | + | chr8.1:28464353-28464372 | MS.gene44956:CDS | 45.0% | |
| ATTGCCCAACATGGACATCA+AGG | - | chr8.1:28463733-28463752 | None:intergenic | 45.0% | |
| CAACTTCATAAAGCAGCTGG+AGG | + | chr8.1:28462789-28462808 | MS.gene44956:CDS | 45.0% | |
| CACATACAAGTTTCAGGCCA+AGG | + | chr8.1:28462731-28462750 | MS.gene44956:CDS | 45.0% | |
| CATTGGACAACCAAGGTATG+TGG | + | chr8.1:28465217-28465236 | MS.gene44956:CDS | 45.0% | |
| CTAAAACTAGTCGAGGTGGA+AGG | + | chr8.1:28463677-28463696 | MS.gene44956:CDS | 45.0% | |
| GTAGGTTCCAATCTGATCCT+TGG | - | chr8.1:28462751-28462770 | None:intergenic | 45.0% | |
| GTGAAATCTCCATCAGGGTA+TGG | - | chr8.1:28462864-28462883 | None:intergenic | 45.0% | |
| GTTCCTTATCCATACCCTGA+TGG | + | chr8.1:28462852-28462871 | MS.gene44956:CDS | 45.0% | |
| TATTGGTAAGCAGGAGGACT+AGG | - | chr8.1:28463896-28463915 | None:intergenic | 45.0% | |
| TCAGCACATCAACGGTCATT+GGG | - | chr8.1:28463167-28463186 | None:intergenic | 45.0% | |
| TCCAACAACTAACGATGTGC+TGG | - | chr8.1:28463056-28463075 | None:intergenic | 45.0% | |
| TCTCCATCAGGGTATGGATA+AGG | - | chr8.1:28462858-28462877 | None:intergenic | 45.0% | |
| TCTCTAGTGCAAGCAGAAGA+TGG | + | chr8.1:28462028-28462047 | MS.gene44956:CDS | 45.0% | |
| TGGTATGATCCTTGTGGGTT+TGG | - | chr8.1:28464379-28464398 | None:intergenic | 45.0% | |
| TTGCCCAACATGGACATCAA+GGG | - | chr8.1:28463732-28463751 | None:intergenic | 45.0% | |
| TTTCAGGCCAAGGATCAGAT+TGG | + | chr8.1:28462741-28462760 | MS.gene44956:CDS | 45.0% | |
| ! | GAATCTGAGGTCTGCAATCT+GGG | + | chr8.1:28465239-28465258 | MS.gene44956:CDS | 45.0% |
| ! | TCATGGCAAGATGGGGTATT+AGG | + | chr8.1:28462675-28462694 | MS.gene44956:CDS | 45.0% |
| !! | GCTGCTACATGCTGTTGTTT+TGG | + | chr8.1:28461991-28462010 | MS.gene44956:CDS | 45.0% |
| !! | GTTTGGAGGTATTGGACAGT+TGG | - | chr8.1:28462703-28462722 | None:intergenic | 45.0% |
| !! | TTGGTGTCATTGGACAACCA+AGG | + | chr8.1:28465210-28465229 | MS.gene44956:CDS | 45.0% |
| !!! | ACAGTTATGGTTTTGGCCAG+TGG | + | chr8.1:28464833-28464852 | MS.gene44956:intron | 45.0% |
| !!! | CTTCCACCTCGACTAGTTTT+AGG | - | chr8.1:28463679-28463698 | None:intergenic | 45.0% |
| ACTAAGTCTAGTTGAGGCCC+CGG | - | chr8.1:28462463-28462482 | None:intergenic | 50.0% | |
| CACCCTAAAACTAGTCGAGG+TGG | + | chr8.1:28463673-28463692 | MS.gene44956:CDS | 50.0% | |
| CATAAAGCAGCTGGAGGGTT+TGG | + | chr8.1:28462795-28462814 | MS.gene44956:CDS | 50.0% | |
| CCATTGATGAGCAGACCATC+AGG | - | chr8.1:28463435-28463454 | None:intergenic | 50.0% | |
| CCTGATGGTCTGCTCATCAA+TGG | + | chr8.1:28463432-28463451 | MS.gene44956:CDS | 50.0% | |
| GACTCCCTTGATGTCCATGT+TGG | + | chr8.1:28463725-28463744 | MS.gene44956:CDS | 50.0% | |
| GCCAGCACATCGTTAGTTGT+TGG | + | chr8.1:28463052-28463071 | MS.gene44956:intron | 50.0% | |
| GTGTACGGTATGACTGCATG+CGG | + | chr8.1:28465074-28465093 | MS.gene44956:intron | 50.0% | |
| TAAGCAGGAGGACTAGGCAA+AGG | - | chr8.1:28463890-28463909 | None:intergenic | 50.0% | |
| TAGGCAAAGGACCAGAAGCA+GGG | - | chr8.1:28463877-28463896 | None:intergenic | 50.0% | |
| TGCATGCGGTCAGTCACATT+TGG | + | chr8.1:28465088-28465107 | MS.gene44956:intron | 50.0% | |
| ! | GGAATCTGAGGTCTGCAATC+TGG | + | chr8.1:28465238-28465257 | MS.gene44956:CDS | 50.0% |
| !! | AACTAACGATGTGCTGGCTG+CGG | - | chr8.1:28463050-28463069 | None:intergenic | 50.0% |
| !! | TGGGCAATCAGCTGCTGTTT+TGG | + | chr8.1:28463745-28463764 | MS.gene44956:CDS | 50.0% |
| AACTCTCACTCCCCTGCTTC+TGG | + | chr8.1:28463863-28463882 | MS.gene44956:CDS | 55.0% | |
| AGGCAAAGGACCAGAAGCAG+GGG | - | chr8.1:28463876-28463895 | None:intergenic | 55.0% | |
| AGTTACCTGTGCAGTGTGCC+TGG | - | chr8.1:28464902-28464921 | None:intergenic | 55.0% | |
| ATTTAGTCGATGCCCCGACC+AGG | + | chr8.1:28464881-28464900 | MS.gene44956:intron | 55.0% | |
| CAGCAGCTGATTGCCCAACA+TGG | - | chr8.1:28463742-28463761 | None:intergenic | 55.0% | |
| CTAGGCAAAGGACCAGAAGC+AGG | - | chr8.1:28463878-28463897 | None:intergenic | 55.0% | |
| TCCACTTGGTACTCCTCAGC+AGG | + | chr8.1:28462093-28462112 | MS.gene44956:CDS | 55.0% | |
| !! | ACCTGCTGAGGAGTACCAAG+TGG | - | chr8.1:28462097-28462116 | None:intergenic | 55.0% |
| !! | ACTAACGATGTGCTGGCTGC+GGG | - | chr8.1:28463049-28463068 | None:intergenic | 55.0% |
| !! | TGGGTTTGGCCTTGCAGCAT+TGG | - | chr8.1:28464365-28464384 | None:intergenic | 55.0% |
| ACCTGTGCAGTGTGCCTGGT+CGG | - | chr8.1:28464898-28464917 | None:intergenic | 60.0% | |
| GCTGCAAGGCCAAACCCACA+AGG | + | chr8.1:28464367-28464386 | MS.gene44956:CDS | 60.0% | |
| TTCTCTTGGCTGGGGTCCAC+TGG | - | chr8.1:28464852-28464871 | None:intergenic | 60.0% | |
| CCTGTGCAGTGTGCCTGGTC+GGG | - | chr8.1:28464897-28464916 | None:intergenic | 65.0% | |
| CTGTGCAGTGTGCCTGGTCG+GGG | - | chr8.1:28464896-28464915 | None:intergenic | 65.0% | |
| CCCGACCAGGCACACTGCAC+AGG | + | chr8.1:28464894-28464913 | MS.gene44956:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 28461965 | 28465295 | 28461965 | ID=MS.gene44956 |
| chr8.1 | mRNA | 28461965 | 28465295 | 28461965 | ID=MS.gene44956.t1;Parent=MS.gene44956 |
| chr8.1 | exon | 28461965 | 28462114 | 28461965 | ID=MS.gene44956.t1.exon1;Parent=MS.gene44956.t1 |
| chr8.1 | CDS | 28461965 | 28462114 | 28461965 | ID=cds.MS.gene44956.t1;Parent=MS.gene44956.t1 |
| chr8.1 | exon | 28462436 | 28462545 | 28462436 | ID=MS.gene44956.t1.exon2;Parent=MS.gene44956.t1 |
| chr8.1 | CDS | 28462436 | 28462545 | 28462436 | ID=cds.MS.gene44956.t1;Parent=MS.gene44956.t1 |
| chr8.1 | exon | 28462650 | 28462920 | 28462650 | ID=MS.gene44956.t1.exon3;Parent=MS.gene44956.t1 |
| chr8.1 | CDS | 28462650 | 28462920 | 28462650 | ID=cds.MS.gene44956.t1;Parent=MS.gene44956.t1 |
| chr8.1 | exon | 28463390 | 28463486 | 28463390 | ID=MS.gene44956.t1.exon4;Parent=MS.gene44956.t1 |
| chr8.1 | CDS | 28463390 | 28463486 | 28463390 | ID=cds.MS.gene44956.t1;Parent=MS.gene44956.t1 |
| chr8.1 | exon | 28463603 | 28463948 | 28463603 | ID=MS.gene44956.t1.exon5;Parent=MS.gene44956.t1 |
| chr8.1 | CDS | 28463603 | 28463948 | 28463603 | ID=cds.MS.gene44956.t1;Parent=MS.gene44956.t1 |
| chr8.1 | exon | 28464348 | 28464691 | 28464348 | ID=MS.gene44956.t1.exon6;Parent=MS.gene44956.t1 |
| chr8.1 | CDS | 28464348 | 28464691 | 28464348 | ID=cds.MS.gene44956.t1;Parent=MS.gene44956.t1 |
| chr8.1 | exon | 28465183 | 28465295 | 28465183 | ID=MS.gene44956.t1.exon7;Parent=MS.gene44956.t1 |
| chr8.1 | CDS | 28465183 | 28465295 | 28465183 | ID=cds.MS.gene44956.t1;Parent=MS.gene44956.t1 |
| Gene Sequence |
| Protein sequence |
