Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45009.t1 | XP_019437634.1 | 33.3 | 489 | 270 | 9 | 61 | 498 | 3 | 486 | 1.90E-73 | 287 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45009.t1 | G7J1G0 | 33.1 | 496 | 272 | 8 | 61 | 501 | 28 | 518 | 3.1e-73 | 285.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049404 | MS.gene45009 | 0.815956 | 7.09E-52 | -1.69E-46 |
MS.gene053166 | MS.gene45009 | 0.819082 | 1.40E-52 | -1.69E-46 |
MS.gene053974 | MS.gene45009 | 0.805993 | 1.02E-49 | -1.69E-46 |
MS.gene054559 | MS.gene45009 | 0.828637 | 8.05E-55 | -1.69E-46 |
MS.gene054651 | MS.gene45009 | 0.803388 | 3.57E-49 | -1.69E-46 |
MS.gene055356 | MS.gene45009 | 0.807255 | 5.53E-50 | -1.69E-46 |
MS.gene055357 | MS.gene45009 | 0.81293 | 3.31E-51 | -1.69E-46 |
MS.gene055818 | MS.gene45009 | 0.803092 | 4.11E-49 | -1.69E-46 |
MS.gene056173 | MS.gene45009 | 0.801078 | 1.07E-48 | -1.69E-46 |
MS.gene056366 | MS.gene45009 | 0.83022 | 3.32E-55 | -1.69E-46 |
MS.gene057414 | MS.gene45009 | 0.823361 | 1.44E-53 | -1.69E-46 |
MS.gene057444 | MS.gene45009 | 0.82412 | 9.59E-54 | -1.69E-46 |
MS.gene059272 | MS.gene45009 | 0.803 | 4.29E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45009.t1 | MTR_3g055660 | 33.065 | 496 | 272 | 8 | 61 | 501 | 28 | 518 | 1.57e-92 | 294 |
MS.gene45009.t1 | MTR_4g014890 | 32.724 | 492 | 250 | 8 | 61 | 501 | 28 | 489 | 7.63e-89 | 283 |
MS.gene45009.t1 | MTR_4g085760 | 32.571 | 525 | 289 | 8 | 55 | 516 | 1 | 523 | 2.26e-88 | 283 |
MS.gene45009.t1 | MTR_6g059860 | 30.382 | 497 | 284 | 8 | 61 | 503 | 22 | 510 | 8.36e-83 | 268 |
MS.gene45009.t1 | MTR_5g004860 | 33.402 | 485 | 265 | 9 | 63 | 493 | 3 | 483 | 3.12e-82 | 267 |
MS.gene45009.t1 | MTR_2g450060 | 31.772 | 491 | 274 | 8 | 61 | 493 | 5 | 492 | 1.18e-74 | 248 |
MS.gene45009.t1 | MTR_5g053590 | 28.159 | 554 | 291 | 13 | 61 | 545 | 1 | 516 | 1.57e-60 | 209 |
MS.gene45009.t1 | MTR_1g043690 | 30.353 | 481 | 272 | 10 | 63 | 493 | 10 | 477 | 2.60e-59 | 208 |
MS.gene45009.t1 | MTR_6g464080 | 27.815 | 453 | 278 | 8 | 61 | 467 | 1 | 450 | 4.97e-58 | 203 |
MS.gene45009.t1 | MTR_1g062890 | 31.206 | 423 | 217 | 6 | 54 | 453 | 15 | 386 | 5.57e-54 | 188 |
MS.gene45009.t1 | MTR_8g076570 | 28.375 | 437 | 265 | 7 | 61 | 452 | 1 | 434 | 9.11e-53 | 192 |
MS.gene45009.t1 | MTR_0003s0290 | 27.356 | 435 | 216 | 9 | 61 | 448 | 1 | 382 | 5.55e-49 | 176 |
MS.gene45009.t1 | MTR_5g041170 | 31.367 | 373 | 193 | 8 | 179 | 493 | 21 | 388 | 1.12e-46 | 169 |
MS.gene45009.t1 | MTR_8g027910 | 32.000 | 250 | 163 | 3 | 61 | 305 | 11 | 258 | 2.52e-44 | 158 |
MS.gene45009.t1 | MTR_7g025160 | 34.123 | 211 | 133 | 2 | 60 | 265 | 10 | 219 | 7.75e-40 | 145 |
MS.gene45009.t1 | MTR_6g055250 | 32.342 | 269 | 157 | 4 | 101 | 345 | 1 | 268 | 8.50e-40 | 149 |
MS.gene45009.t1 | MTR_2g055290 | 33.971 | 209 | 111 | 3 | 61 | 268 | 1 | 183 | 1.34e-39 | 142 |
MS.gene45009.t1 | MTR_2g060880 | 27.404 | 416 | 240 | 10 | 82 | 452 | 52 | 450 | 4.08e-39 | 150 |
MS.gene45009.t1 | MTR_7g450880 | 28.975 | 283 | 153 | 4 | 172 | 407 | 15 | 296 | 7.26e-32 | 125 |
MS.gene45009.t1 | MTR_7g052740 | 30.213 | 235 | 142 | 5 | 72 | 304 | 83 | 297 | 1.09e-29 | 120 |
MS.gene45009.t1 | MTR_8g077490 | 40.940 | 149 | 77 | 2 | 63 | 204 | 51 | 195 | 1.47e-29 | 117 |
MS.gene45009.t1 | MTR_6g045290 | 31.034 | 203 | 129 | 2 | 65 | 265 | 271 | 464 | 4.69e-28 | 117 |
MS.gene45009.t1 | MTR_1g092930 | 40.164 | 122 | 73 | 0 | 64 | 185 | 4 | 125 | 7.15e-26 | 110 |
MS.gene45009.t1 | MTR_4g070160 | 32.955 | 176 | 115 | 2 | 120 | 293 | 2 | 176 | 9.83e-26 | 105 |
MS.gene45009.t1 | MTR_5g064590 | 26.721 | 247 | 122 | 6 | 61 | 305 | 1 | 190 | 2.95e-25 | 105 |
MS.gene45009.t1 | MTR_2g055900 | 33.333 | 168 | 91 | 3 | 167 | 318 | 54 | 216 | 5.19e-24 | 101 |
MS.gene45009.t1 | MTR_1g092990 | 38.095 | 126 | 77 | 1 | 64 | 188 | 4 | 129 | 1.46e-23 | 103 |
MS.gene45009.t1 | MTR_1g041830 | 41.441 | 111 | 64 | 1 | 63 | 173 | 5 | 114 | 3.91e-23 | 95.1 |
MS.gene45009.t1 | MTR_8g076180 | 26.250 | 240 | 131 | 5 | 61 | 290 | 1 | 204 | 5.60e-23 | 98.2 |
MS.gene45009.t1 | MTR_7g110100 | 22.929 | 519 | 327 | 16 | 79 | 545 | 19 | 516 | 6.66e-23 | 102 |
MS.gene45009.t1 | MTR_6g477950 | 36.496 | 137 | 85 | 2 | 61 | 196 | 180 | 315 | 2.50e-22 | 98.2 |
MS.gene45009.t1 | MTR_6g477970 | 33.824 | 136 | 89 | 1 | 61 | 196 | 1 | 135 | 5.00e-22 | 92.4 |
MS.gene45009.t1 | MTR_1g105785 | 27.848 | 237 | 160 | 6 | 75 | 304 | 15 | 247 | 3.05e-21 | 97.8 |
MS.gene45009.t1 | MTR_3g452170 | 22.924 | 301 | 202 | 7 | 79 | 353 | 19 | 315 | 1.57e-19 | 92.0 |
MS.gene45009.t1 | MTR_1g052715 | 25.604 | 207 | 147 | 4 | 99 | 301 | 1 | 204 | 2.29e-19 | 89.7 |
MS.gene45009.t1 | MTR_1g093010 | 33.600 | 125 | 61 | 1 | 61 | 185 | 1 | 103 | 5.67e-18 | 86.3 |
MS.gene45009.t1 | MTR_4g036240 | 22.573 | 443 | 279 | 12 | 65 | 454 | 5 | 436 | 1.28e-17 | 86.7 |
MS.gene45009.t1 | MTR_1g011320 | 30.052 | 193 | 125 | 4 | 105 | 287 | 57 | 249 | 1.38e-17 | 84.0 |
MS.gene45009.t1 | MTR_7g024060 | 24.696 | 247 | 171 | 7 | 65 | 302 | 5 | 245 | 2.16e-16 | 80.9 |
MS.gene45009.t1 | MTR_6g087820 | 24.696 | 247 | 171 | 7 | 65 | 302 | 5 | 245 | 2.16e-16 | 80.9 |
MS.gene45009.t1 | MTR_5g081190 | 24.696 | 247 | 171 | 7 | 65 | 302 | 5 | 245 | 2.16e-16 | 80.9 |
MS.gene45009.t1 | MTR_5g091480 | 24.696 | 247 | 171 | 7 | 65 | 302 | 5 | 245 | 2.16e-16 | 80.9 |
MS.gene45009.t1 | MTR_5g056290 | 24.696 | 247 | 171 | 7 | 65 | 302 | 5 | 245 | 2.16e-16 | 80.9 |
MS.gene45009.t1 | MTR_3g031190 | 24.696 | 247 | 171 | 7 | 65 | 302 | 5 | 245 | 2.16e-16 | 80.9 |
MS.gene45009.t1 | MTR_2g005490 | 24.696 | 247 | 171 | 7 | 65 | 302 | 5 | 245 | 2.16e-16 | 80.9 |
MS.gene45009.t1 | MTR_2g010570 | 24.696 | 247 | 171 | 7 | 65 | 302 | 5 | 245 | 2.16e-16 | 80.9 |
MS.gene45009.t1 | MTR_5g030110 | 24.696 | 247 | 171 | 7 | 65 | 302 | 5 | 245 | 2.32e-16 | 80.9 |
MS.gene45009.t1 | MTR_2g007410 | 24.696 | 247 | 171 | 7 | 65 | 302 | 5 | 245 | 2.32e-16 | 80.9 |
MS.gene45009.t1 | MTR_7g074180 | 25.101 | 247 | 170 | 7 | 65 | 302 | 5 | 245 | 3.24e-16 | 80.5 |
MS.gene45009.t1 | MTR_1g023370 | 24.590 | 244 | 169 | 7 | 65 | 299 | 5 | 242 | 7.65e-16 | 79.0 |
MS.gene45009.t1 | MTR_8g446640 | 25.862 | 232 | 157 | 7 | 80 | 302 | 1 | 226 | 1.35e-15 | 78.2 |
MS.gene45009.t1 | MTR_4g058660 | 24.291 | 247 | 172 | 7 | 65 | 302 | 5 | 245 | 1.83e-15 | 78.2 |
MS.gene45009.t1 | MTR_7g451880 | 24.291 | 247 | 172 | 7 | 65 | 302 | 6 | 246 | 2.16e-15 | 77.8 |
MS.gene45009.t1 | MTR_1g082860 | 25.431 | 232 | 155 | 6 | 65 | 290 | 5 | 224 | 1.19e-14 | 74.7 |
MS.gene45009.t1 | MTR_1g011490 | 24.790 | 238 | 161 | 6 | 71 | 302 | 11 | 236 | 1.62e-14 | 75.1 |
MS.gene45009.t1 | MTR_3g044760 | 25.105 | 239 | 166 | 7 | 64 | 298 | 4 | 233 | 1.79e-14 | 76.3 |
MS.gene45009.t1 | MTR_8g062030 | 21.862 | 247 | 181 | 6 | 61 | 300 | 1 | 242 | 3.11e-14 | 75.9 |
MS.gene45009.t1 | MTR_5g078250 | 21.951 | 410 | 260 | 15 | 61 | 421 | 1 | 399 | 3.91e-14 | 75.5 |
MS.gene45009.t1 | MTR_6g039240 | 21.739 | 299 | 197 | 7 | 68 | 354 | 8 | 281 | 7.40e-14 | 72.8 |
MS.gene45009.t1 | MTR_2g048560 | 21.320 | 394 | 247 | 10 | 65 | 398 | 5 | 395 | 9.26e-14 | 74.3 |
MS.gene45009.t1 | MTR_8g463820 | 21.555 | 283 | 190 | 6 | 66 | 341 | 6 | 263 | 4.82e-13 | 70.1 |
MS.gene45009.t1 | MTR_3g015660 | 24.066 | 241 | 168 | 7 | 65 | 296 | 5 | 239 | 5.39e-13 | 69.3 |
MS.gene45009.t1 | MTR_4g037530 | 35.714 | 84 | 54 | 0 | 62 | 145 | 77 | 160 | 1.23e-12 | 66.6 |
MS.gene45009.t1 | MTR_7g051400 | 24.737 | 190 | 137 | 2 | 79 | 265 | 19 | 205 | 1.26e-12 | 70.9 |
MS.gene45009.t1 | MTR_7g045450 | 22.857 | 245 | 163 | 6 | 65 | 302 | 5 | 230 | 1.35e-12 | 68.6 |
MS.gene45009.t1 | MTR_6g073570 | 22.857 | 245 | 163 | 6 | 65 | 302 | 5 | 230 | 1.35e-12 | 68.6 |
MS.gene45009.t1 | MTR_3g112110 | 22.989 | 174 | 93 | 3 | 61 | 233 | 1 | 134 | 1.47e-12 | 65.9 |
MS.gene45009.t1 | MTR_2g010270 | 25.000 | 240 | 158 | 7 | 80 | 302 | 1 | 235 | 1.58e-12 | 68.9 |
MS.gene45009.t1 | MTR_5g045850 | 23.729 | 236 | 153 | 7 | 65 | 296 | 5 | 217 | 1.63e-12 | 68.9 |
MS.gene45009.t1 | MTR_0048s0080 | 24.419 | 258 | 156 | 9 | 196 | 421 | 4 | 254 | 2.34e-12 | 68.9 |
MS.gene45009.t1 | MTR_8g479260 | 22.314 | 242 | 180 | 4 | 65 | 301 | 7 | 245 | 1.47e-11 | 67.4 |
MS.gene45009.t1 | MTR_2g008650 | 22.314 | 242 | 180 | 4 | 65 | 301 | 7 | 245 | 1.68e-11 | 67.4 |
MS.gene45009.t1 | MTR_1g094230 | 22.500 | 240 | 161 | 5 | 68 | 300 | 8 | 229 | 2.01e-11 | 65.5 |
MS.gene45009.t1 | MTR_4g070090 | 22.090 | 421 | 271 | 12 | 68 | 435 | 23 | 439 | 2.81e-11 | 66.2 |
MS.gene45009.t1 | MTR_6g465570 | 26.797 | 153 | 101 | 4 | 80 | 224 | 16 | 165 | 9.05e-11 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45009.t1 | AT1G52950 | 20.039 | 514 | 343 | 12 | 64 | 523 | 6 | 505 | 1.20e-15 | 80.5 |
Find 107 sgRNAs with CRISPR-Local
Find 363 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTTCTTATTACTATTTATT+TGG | 0.058259 | 6.3:-68783715 | None:intergenic |
TAATAATGATCTTCAGTTTA+AGG | 0.121188 | 6.3:+68783420 | MS.gene45009:CDS |
AAGAGAATCATATGCAATTT+TGG | 0.149359 | 6.3:-68785080 | None:intergenic |
TAAAACAAATTACATGTTTC+AGG | 0.168129 | 6.3:-68784241 | None:intergenic |
ATTCAAAAGTTACAATTATT+TGG | 0.177524 | 6.3:-68785640 | None:intergenic |
TGAATTTAACTATGGTATTC+AGG | 0.222386 | 6.3:+68784870 | MS.gene45009:CDS |
ATCTTGATTGGTAATGATTC+TGG | 0.224355 | 6.3:-68784126 | None:intergenic |
AGAAGAGAAAGACGACAAAT+TGG | 0.259503 | 6.3:+68785607 | MS.gene45009:CDS |
TCAACATTTGTGTTCTTTGA+TGG | 0.263126 | 6.3:+68784633 | MS.gene45009:CDS |
CCCTCGCCGATGGAAACTTT+TGG | 0.265731 | 6.3:+68779858 | MS.gene45009:CDS |
ATTATATCATAATAGGTATA+AGG | 0.281552 | 6.3:+68784578 | MS.gene45009:intron |
TTTCAGTGTGCCTCCGTAAT+AGG | 0.307375 | 6.3:+68783565 | MS.gene45009:CDS |
ATCTAATATGGAAACCCTTT+TGG | 0.309300 | 6.3:-68784422 | None:intergenic |
TACCTCTTCTTTCAGCAGTT+TGG | 0.316560 | 6.3:-68784972 | None:intergenic |
GGAGTTTGCACCCAACTCTT+AGG | 0.324292 | 6.3:+68784654 | MS.gene45009:CDS |
GATTTCTTGTAAATCTTGAT+TGG | 0.336200 | 6.3:-68784138 | None:intergenic |
CGAATACAACTCCTGCAAAA+AGG | 0.341351 | 6.3:+68785258 | MS.gene45009:CDS |
AAAGCTGTTGAATTTAACTA+TGG | 0.346330 | 6.3:+68784862 | MS.gene45009:CDS |
TTCCTAATAATGAAAACAAT+AGG | 0.350603 | 6.3:-68783940 | None:intergenic |
TCTGTTGTCTTAGATATCAT+TGG | 0.353003 | 6.3:+68783668 | MS.gene45009:intron |
TTTCTTATTACTATTTATTT+GGG | 0.361355 | 6.3:-68783714 | None:intergenic |
GGGTGGTTTGTTGTGTGTTT+CGG | 0.361823 | 6.3:-68779838 | None:intergenic |
AAAATAACTATAAGTTGCTT+TGG | 0.376953 | 6.3:+68783449 | MS.gene45009:CDS |
AGCAAATTTCCAAGTTTCCT+TGG | 0.378150 | 6.3:-68783142 | None:intergenic |
CTACTGAATATGTCTCTTCC+TGG | 0.399491 | 6.3:+68783344 | MS.gene45009:CDS |
CTATGGTATTCAGGGTGAAA+TGG | 0.399785 | 6.3:+68784879 | MS.gene45009:CDS |
AGATCTTCTAATGAGTCAAA+TGG | 0.408809 | 6.3:-68783111 | None:intergenic |
AAATAAATTATACCAGTTGC+AGG | 0.415112 | 6.3:-68783976 | None:intergenic |
CAAGATGTAGATCTGGCTTC+AGG | 0.416739 | 6.3:-68779932 | None:intergenic |
CGCAGTTTGACCAATCAGAC+AGG | 0.422736 | 6.3:+68783907 | MS.gene45009:CDS |
TGCTCGCGTCGCTTCTCGAC+GGG | 0.427200 | 6.3:-68779904 | None:intergenic |
GTTGTATTCGAACCATTCTC+TGG | 0.429750 | 6.3:-68785245 | None:intergenic |
TCTCTTGCTCCAGATCCTCT+TGG | 0.435607 | 6.3:-68779806 | None:intergenic |
TCCTAATAATGAAAACAATA+GGG | 0.438167 | 6.3:-68783939 | None:intergenic |
GAATTTAACTATGGTATTCA+GGG | 0.446826 | 6.3:+68784871 | MS.gene45009:CDS |
GAAGAGAAAGACGACAAATT+GGG | 0.448380 | 6.3:+68785608 | MS.gene45009:CDS |
GAATCTCCGCATCAAACCTT+AGG | 0.454939 | 6.3:+68784676 | MS.gene45009:CDS |
CTAACAAGGTGGTTACTTCA+AGG | 0.457608 | 6.3:+68784366 | MS.gene45009:CDS |
GTTTGGCCTCAACTGAGTTA+AGG | 0.458774 | 6.3:-68784955 | None:intergenic |
GCGACGAAACCAAGAGGATC+TGG | 0.458908 | 6.3:+68779797 | MS.gene45009:CDS |
AACTATAAGTTGCTTTGGAC+TGG | 0.459246 | 6.3:+68783454 | MS.gene45009:CDS |
CTATGAAATGAACAACTTCA+AGG | 0.461461 | 6.3:+68783393 | MS.gene45009:CDS |
TAAATGATTCCAAGGAAACT+TGG | 0.462013 | 6.3:+68783133 | MS.gene45009:CDS |
TAAGAATAAATTCTCTAATG+AGG | 0.465761 | 6.3:+68784169 | MS.gene45009:CDS |
GGACTGCTTGTAACAAGAAT+GGG | 0.469444 | 6.3:+68783184 | MS.gene45009:CDS |
GCAGCCATTCAGCCTGCAAC+TGG | 0.474310 | 6.3:+68783964 | MS.gene45009:CDS |
GGTGTTACATGTGCACCAAA+AGG | 0.475781 | 6.3:+68784407 | MS.gene45009:CDS |
TGCGGAGATTCCTAAGAGTT+GGG | 0.478173 | 6.3:-68784664 | None:intergenic |
ATGCGGAGATTCCTAAGAGT+TGG | 0.480520 | 6.3:-68784665 | None:intergenic |
CAGTCCACAGATTAACAATT+CGG | 0.480541 | 6.3:-68783167 | None:intergenic |
CTTCAGCCAAGATGTAGATC+TGG | 0.483006 | 6.3:-68779939 | None:intergenic |
AAAACAAATTACATGTTTCA+GGG | 0.489492 | 6.3:-68784240 | None:intergenic |
TGTTTCAGGGCATTGATTTG+TGG | 0.495693 | 6.3:-68784227 | None:intergenic |
GATCTTCTAATGAGTCAAAT+GGG | 0.496841 | 6.3:-68783110 | None:intergenic |
TTCTTTCAGATCATCTCTCC+AGG | 0.507819 | 6.3:-68783362 | None:intergenic |
TGGACTGCTTGTAACAAGAA+TGG | 0.510813 | 6.3:+68783183 | MS.gene45009:CDS |
TCAAAACACGTTCTGTAATG+AGG | 0.512290 | 6.3:+68784912 | MS.gene45009:CDS |
TATACCAGTTGCAGGCTGAA+TGG | 0.512959 | 6.3:-68783968 | None:intergenic |
TTTCCTTCAGGCTTACTGGT+AGG | 0.513435 | 6.3:-68785516 | None:intergenic |
CTGAAGCCAGATCTACATCT+TGG | 0.513942 | 6.3:+68779933 | MS.gene45009:CDS |
AAGACGACAAATTGGGAAGA+AGG | 0.515939 | 6.3:+68785615 | MS.gene45009:CDS |
GCATATTCAAATGGTCGTAA+TGG | 0.517451 | 6.3:+68783212 | MS.gene45009:CDS |
CTTGCTGAACTGTACTTTGT+GGG | 0.532284 | 6.3:+68783864 | MS.gene45009:CDS |
GTGTTACATGTGCACCAAAA+GGG | 0.535639 | 6.3:+68784408 | MS.gene45009:CDS |
CATGCATTTGTAACACATAC+CGG | 0.540734 | 6.3:-68784095 | None:intergenic |
ACTGAGTATGATCCAGAGAA+TGG | 0.547509 | 6.3:+68785233 | MS.gene45009:CDS |
GTGCTCGCGTCGCTTCTCGA+CGG | 0.549414 | 6.3:-68779905 | None:intergenic |
CGGTATGTGTTACAAATGCA+TGG | 0.549973 | 6.3:+68784096 | MS.gene45009:CDS |
AGAAGATCTAAATGATTCCA+AGG | 0.550217 | 6.3:+68783125 | MS.gene45009:CDS |
ACTTGCTGAACTGTACTTTG+TGG | 0.551094 | 6.3:+68783863 | MS.gene45009:CDS |
AATGGTCGTAATGGATGCTA+AGG | 0.552374 | 6.3:+68783221 | MS.gene45009:CDS |
GACTTTCCTTAACTCAGTTG+AGG | 0.568021 | 6.3:+68784949 | MS.gene45009:CDS |
CAGGAAGAGACATATTCAGT+AGG | 0.569651 | 6.3:-68783343 | None:intergenic |
CAACAAACCACCCTCGCCGA+TGG | 0.571591 | 6.3:+68779848 | MS.gene45009:CDS |
TGGTTACTTCAAGGAGTGGA+TGG | 0.577259 | 6.3:+68784375 | MS.gene45009:CDS |
AAAATTTATACCTATTACGG+AGG | 0.577833 | 6.3:-68783575 | None:intergenic |
TTAACAACAGGATGAAGACT+TGG | 0.577861 | 6.3:+68783083 | MS.gene45009:intron |
AAAGTTTCCATCGGCGAGGG+TGG | 0.579834 | 6.3:-68779855 | None:intergenic |
CTGTCCGAATTGTTAATCTG+TGG | 0.582635 | 6.3:+68783163 | MS.gene45009:CDS |
CAGATCTACATCTTGGCTGA+AGG | 0.584030 | 6.3:+68779940 | MS.gene45009:CDS |
TCATACTCAGTTGTAGCAGA+GGG | 0.585788 | 6.3:-68785221 | None:intergenic |
CCAAAAGTTTCCATCGGCGA+GGG | 0.591207 | 6.3:-68779858 | None:intergenic |
AGGAAGAGACATATTCAGTA+GGG | 0.595199 | 6.3:-68783342 | None:intergenic |
TTGGATTCGACGGGAAAGAG+AGG | 0.612516 | 6.3:+68779877 | MS.gene45009:CDS |
GATCTGGAGCAAGAGATCAT+CGG | 0.614745 | 6.3:+68779813 | MS.gene45009:CDS |
ATATCATAATAGGTATAAGG+TGG | 0.620199 | 6.3:+68784581 | MS.gene45009:intron |
ATCATACTCAGTTGTAGCAG+AGG | 0.622170 | 6.3:-68785222 | None:intergenic |
TCGAATCCAAAAGTTTCCAT+CGG | 0.624848 | 6.3:-68779864 | None:intergenic |
TCCAAAAGTTTCCATCGGCG+AGG | 0.628345 | 6.3:-68779859 | None:intergenic |
AAGGTGGTTACTTCAAGGAG+TGG | 0.630951 | 6.3:+68784371 | MS.gene45009:CDS |
GCAGTTTGACCAATCAGACA+GGG | 0.633790 | 6.3:+68783908 | MS.gene45009:CDS |
GATTCGACGGGAAAGAGAGG+TGG | 0.647107 | 6.3:+68779880 | MS.gene45009:CDS |
GATGTAGATCTGGCTTCAGG+TGG | 0.648486 | 6.3:-68779929 | None:intergenic |
GGCCAAACTGCTGAAAGAAG+AGG | 0.648879 | 6.3:+68784970 | MS.gene45009:CDS |
ACTCCTACCAGTAAGCCTGA+AGG | 0.662254 | 6.3:+68785513 | MS.gene45009:CDS |
GCAATCACAGAATGATCATG+TGG | 0.663477 | 6.3:+68785105 | MS.gene45009:CDS |
TGTGTTACAAATGCATGGAG+TGG | 0.666360 | 6.3:+68784101 | MS.gene45009:CDS |
AATTTCTCATGAGAGACACT+AGG | 0.669361 | 6.3:+68783747 | MS.gene45009:CDS |
GGAGTTGACATCTGATGTTG+TGG | 0.677194 | 6.3:+68785485 | MS.gene45009:intron |
GTTGACATCTGATGTTGTGG+AGG | 0.689052 | 6.3:+68785488 | MS.gene45009:CDS |
GACTGCTTGTAACAAGAATG+GGG | 0.695569 | 6.3:+68783185 | MS.gene45009:CDS |
CGAATGGCGACGAAACCAAG+AGG | 0.701307 | 6.3:+68779791 | None:intergenic |
AGTTTGACCAATCAGACAGG+GGG | 0.703292 | 6.3:+68783910 | MS.gene45009:CDS |
CAGTTTGACCAATCAGACAG+GGG | 0.709276 | 6.3:+68783909 | MS.gene45009:CDS |
AGGAGTGGATGGACATACGA+TGG | 0.720339 | 6.3:+68784386 | MS.gene45009:CDS |
ACTGCTTGTAACAAGAATGG+GGG | 0.722412 | 6.3:+68783186 | MS.gene45009:CDS |
CATACTCAGTTGTAGCAGAG+GGG | 0.734257 | 6.3:-68785220 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAACAGAATATATTTA+AGG | - | chr6.3:68784558-68784577 | None:intergenic | 10.0% |
!! | AAAAAACAGAATATATTTAA+GGG | - | chr6.3:68784557-68784576 | None:intergenic | 10.0% |
!! | ATAAAAATACAATTTAAACA+TGG | - | chr6.3:68783262-68783281 | None:intergenic | 10.0% |
!! | ATAAAAATTTATACCTATTA+CGG | - | chr6.3:68783581-68783600 | None:intergenic | 10.0% |
!! | TTTATTAATGTATTTAATCA+TGG | - | chr6.3:68784736-68784755 | None:intergenic | 10.0% |
!! | TTTCTTATTACTATTTATTT+GGG | - | chr6.3:68783717-68783736 | None:intergenic | 10.0% |
!! | AAAAAAAAGGTAAAGTTTAA+GGG | - | chr6.3:68781577-68781596 | None:intergenic | 15.0% |
!! | AAAAACAGAATATATTTAAG+GGG | - | chr6.3:68784556-68784575 | None:intergenic | 15.0% |
!! | AAAATAAGAATGAAATGAAA+AGG | - | chr6.3:68782294-68782313 | None:intergenic | 15.0% |
!! | AACATTAACATCTTATTAAA+TGG | + | chr6.3:68783786-68783805 | MS.gene45009:intron | 15.0% |
!! | AAGTTTACTTTACATTTATT+TGG | + | chr6.3:68784014-68784033 | MS.gene45009:intron | 15.0% |
!! | AATTAAAGAATGTAGTTAAA+TGG | - | chr6.3:68784509-68784528 | None:intergenic | 15.0% |
!! | ATTATATCATAATAGGTATA+AGG | + | chr6.3:68784578-68784597 | MS.gene45009:intron | 15.0% |
!! | CTTTCTTATTACTATTTATT+TGG | - | chr6.3:68783718-68783737 | None:intergenic | 15.0% |
!! | GTATGTAAACATATAAAAAT+GGG | - | chr6.3:68781746-68781765 | None:intergenic | 15.0% |
!! | TGTATGTAAACATATAAAAA+TGG | - | chr6.3:68781747-68781766 | None:intergenic | 15.0% |
!! | TTTATACTTAAATGTTAAAG+AGG | + | chr6.3:68782361-68782380 | MS.gene45009:intron | 15.0% |
!!! | AAACAATTTGCTAAATAAAT+TGG | - | chr6.3:68782761-68782780 | None:intergenic | 15.0% |
!!! | AGTTTCTAAAAAGTATAAAT+AGG | - | chr6.3:68784041-68784060 | None:intergenic | 15.0% |
!!! | ATTTTAATAAGTGTACATTT+AGG | - | chr6.3:68785170-68785189 | None:intergenic | 15.0% |
!!! | CTATTTTTTTTTCAATTCAT+AGG | + | chr6.3:68785464-68785483 | MS.gene45009:intron | 15.0% |
!!! | TATTGATCTTTTAATACATA+AGG | - | chr6.3:68780589-68780608 | None:intergenic | 15.0% |
!! | AAAACAAATTACATGTTTCA+GGG | - | chr6.3:68784243-68784262 | None:intergenic | 20.0% |
!! | AAAATAACTATAAGTTGCTT+TGG | + | chr6.3:68783449-68783468 | MS.gene45009:CDS | 20.0% |
!! | AAATACAATTTAAACATGGA+AGG | - | chr6.3:68783258-68783277 | None:intergenic | 20.0% |
!! | AAGAATTAGTTAAGGATAAA+TGG | + | chr6.3:68785391-68785410 | MS.gene45009:intron | 20.0% |
!! | AATTCAATATCCAATACTAT+TGG | + | chr6.3:68784766-68784785 | MS.gene45009:intron | 20.0% |
!! | ATAGACATACAATTATATGA+TGG | - | chr6.3:68783292-68783311 | None:intergenic | 20.0% |
!! | GAAAAAAAAGGTAAAGTTTA+AGG | - | chr6.3:68781578-68781597 | None:intergenic | 20.0% |
!! | TAAAACAAATTACATGTTTC+AGG | - | chr6.3:68784244-68784263 | None:intergenic | 20.0% |
!! | TAAGAATAAATTCTCTAATG+AGG | + | chr6.3:68784169-68784188 | MS.gene45009:CDS | 20.0% |
!! | TAATAATGATCTTCAGTTTA+AGG | + | chr6.3:68783420-68783439 | MS.gene45009:CDS | 20.0% |
!! | TCCTAATAATGAAAACAATA+GGG | - | chr6.3:68783942-68783961 | None:intergenic | 20.0% |
!! | TGACATATTAACACAATATT+TGG | + | chr6.3:68781352-68781371 | MS.gene45009:intron | 20.0% |
!! | TTATCTTAAAGAAGAAAAAG+AGG | - | chr6.3:68781605-68781624 | None:intergenic | 20.0% |
!! | TTCCTAATAATGAAAACAAT+AGG | - | chr6.3:68783943-68783962 | None:intergenic | 20.0% |
!!! | AAAAGTGATATATTTTGCAT+AGG | - | chr6.3:68781427-68781446 | None:intergenic | 20.0% |
!!! | AATGGAAAAATATGTTTTGT+TGG | - | chr6.3:68785332-68785351 | None:intergenic | 20.0% |
!!! | AATTGTATGTCTATCTTTTA+GGG | + | chr6.3:68783298-68783317 | MS.gene45009:intron | 20.0% |
!!! | AGTCTTCATCTTAAAAATTT+TGG | + | chr6.3:68782854-68782873 | MS.gene45009:intron | 20.0% |
!!! | TAATTGTATGTCTATCTTTT+AGG | + | chr6.3:68783297-68783316 | MS.gene45009:intron | 20.0% |
!!! | TTTGATATCATATTTGAAGT+GGG | + | chr6.3:68783839-68783858 | MS.gene45009:intron | 20.0% |
!!! | TTTTGATATCATATTTGAAG+TGG | + | chr6.3:68783838-68783857 | MS.gene45009:intron | 20.0% |
!!! | TTTTTACTTTTATGTCATGT+AGG | - | chr6.3:68780130-68780149 | None:intergenic | 20.0% |
! | AAAATCCTTGAAAAAGAAGT+GGG | - | chr6.3:68783524-68783543 | None:intergenic | 25.0% |
! | AAAATTTATACCTATTACGG+AGG | - | chr6.3:68783578-68783597 | None:intergenic | 25.0% |
! | AAAGCTGTTGAATTTAACTA+TGG | + | chr6.3:68784862-68784881 | MS.gene45009:CDS | 25.0% |
! | AAATAAATTATACCAGTTGC+AGG | - | chr6.3:68783979-68783998 | None:intergenic | 25.0% |
! | AATCAAGAACTTAATGCTTT+CGG | - | chr6.3:68780403-68780422 | None:intergenic | 25.0% |
! | AGAAATGATCGTGATAATAT+TGG | - | chr6.3:68780249-68780268 | None:intergenic | 25.0% |
! | AGGTAAGAAAGCTATTTATA+TGG | + | chr6.3:68780857-68780876 | MS.gene45009:intron | 25.0% |
! | ATACGGAATAAATTAACAAC+AGG | + | chr6.3:68783071-68783090 | MS.gene45009:intron | 25.0% |
! | ATATCATAATAGGTATAAGG+TGG | + | chr6.3:68784581-68784600 | MS.gene45009:intron | 25.0% |
! | ATTGAATAATGATGAAAGAG+TGG | - | chr6.3:68782657-68782676 | None:intergenic | 25.0% |
! | GAATTTAACTATGGTATTCA+GGG | + | chr6.3:68784871-68784890 | MS.gene45009:CDS | 25.0% |
! | GATTAAAAAGCGATTATCAA+AGG | + | chr6.3:68780419-68780438 | MS.gene45009:intron | 25.0% |
! | GATTTCTTGTAAATCTTGAT+TGG | - | chr6.3:68784141-68784160 | None:intergenic | 25.0% |
! | GGTAAGAAAGCTATTTATAT+GGG | + | chr6.3:68780858-68780877 | MS.gene45009:intron | 25.0% |
! | TAAAATCCTTGAAAAAGAAG+TGG | - | chr6.3:68783525-68783544 | None:intergenic | 25.0% |
! | TAAAGAGATTCAAGATGATT+TGG | - | chr6.3:68780517-68780536 | None:intergenic | 25.0% |
! | TAACCTAATGTCTAAGAAAA+TGG | - | chr6.3:68782986-68783005 | None:intergenic | 25.0% |
! | TAAGACAACAGAATATAGTT+AGG | - | chr6.3:68783660-68783679 | None:intergenic | 25.0% |
! | TGAATTTAACTATGGTATTC+AGG | + | chr6.3:68784870-68784889 | MS.gene45009:CDS | 25.0% |
! | TTATCAATCAACTCTTGATA+TGG | + | chr6.3:68785010-68785029 | MS.gene45009:intron | 25.0% |
! | TTTCACAATCTTTCACATTA+GGG | + | chr6.3:68780068-68780087 | MS.gene45009:intron | 25.0% |
!! | AAACCATTTTCTTAGACATT+AGG | + | chr6.3:68782980-68782999 | MS.gene45009:intron | 25.0% |
!! | AAGAGAATCATATGCAATTT+TGG | - | chr6.3:68785083-68785102 | None:intergenic | 25.0% |
!! | ACAATTTGCCATCAAATTTT+AGG | + | chr6.3:68782811-68782830 | MS.gene45009:intron | 25.0% |
!! | ACCCTATTGTTTTCATTATT+AGG | + | chr6.3:68783938-68783957 | MS.gene45009:CDS | 25.0% |
!! | AGAGAATCATATGCAATTTT+GGG | - | chr6.3:68785082-68785101 | None:intergenic | 25.0% |
!! | TATATTTTGCATAGGAGTTT+AGG | - | chr6.3:68781419-68781438 | None:intergenic | 25.0% |
!! | TGTATTTTCCTACACAAAAA+GGG | + | chr6.3:68781305-68781324 | MS.gene45009:intron | 25.0% |
!! | TTGTATTTTCCTACACAAAA+AGG | + | chr6.3:68781304-68781323 | MS.gene45009:intron | 25.0% |
!! | TTTTCACAATCTTTCACATT+AGG | + | chr6.3:68780067-68780086 | MS.gene45009:intron | 25.0% |
!! | TTTTTATGACTGAACTCATA+CGG | + | chr6.3:68783054-68783073 | MS.gene45009:intron | 25.0% |
!!! | ATGCTCTAAAGAATTAGTTA+AGG | + | chr6.3:68785383-68785402 | MS.gene45009:intron | 25.0% |
!!! | ATGGCAAATTGTCTTATTTA+TGG | - | chr6.3:68782803-68782822 | None:intergenic | 25.0% |
!!! | CCATCAAATTTTAGGTTTTT+GGG | + | chr6.3:68782819-68782838 | MS.gene45009:intron | 25.0% |
AAAAAGGTTGTCTTCAAAAG+AGG | + | chr6.3:68785274-68785293 | MS.gene45009:CDS | 30.0% | |
AAAAGAGGAGGAGAAAAAAA+AGG | - | chr6.3:68781590-68781609 | None:intergenic | 30.0% | |
AAAAGGGTTTCCATATTAGA+TGG | + | chr6.3:68784424-68784443 | MS.gene45009:intron | 30.0% | |
AAGAGTGGAGAAGAAATTAA+TGG | - | chr6.3:68782642-68782661 | None:intergenic | 30.0% | |
AAGGCTTAAACCAATAGTAT+TGG | - | chr6.3:68784779-68784798 | None:intergenic | 30.0% | |
AATCTTTCACATTAGGGTAT+GGG | + | chr6.3:68780074-68780093 | MS.gene45009:intron | 30.0% | |
AATTAGTGTTTGATGCAAAC+TGG | + | chr6.3:68784525-68784544 | MS.gene45009:intron | 30.0% | |
AGAAGATCTAAATGATTCCA+AGG | + | chr6.3:68783125-68783144 | MS.gene45009:CDS | 30.0% | |
AGATCTTCTAATGAGTCAAA+TGG | - | chr6.3:68783114-68783133 | None:intergenic | 30.0% | |
AGCAATTGCTAAATATGAAG+AGG | + | chr6.3:68782172-68782191 | MS.gene45009:intron | 30.0% | |
ATCACCATTGTCACAATATT+TGG | + | chr6.3:68782463-68782482 | MS.gene45009:intron | 30.0% | |
ATGTAGTTAAATGGTTAGTG+AGG | - | chr6.3:68784500-68784519 | None:intergenic | 30.0% | |
CCCAAAAACCTAAAATTTGA+TGG | - | chr6.3:68782822-68782841 | None:intergenic | 30.0% | |
CGAAAACTGAATAACAGTTA+TGG | + | chr6.3:68782146-68782165 | MS.gene45009:intron | 30.0% | |
CTATGAAATGAACAACTTCA+AGG | + | chr6.3:68783393-68783412 | MS.gene45009:CDS | 30.0% | |
CTGCACAATAAAGCAAAATA+AGG | - | chr6.3:68784798-68784817 | None:intergenic | 30.0% | |
GACATAAAAGTAAAAACGAG+AGG | + | chr6.3:68780134-68780153 | MS.gene45009:intron | 30.0% | |
GAGTAGGTTCATTATTAACA+TGG | - | chr6.3:68784471-68784490 | None:intergenic | 30.0% | |
GATCTTCTAATGAGTCAAAT+GGG | - | chr6.3:68783113-68783132 | None:intergenic | 30.0% | |
TAAACGATAACAAAGTCGAT+CGG | + | chr6.3:68780341-68780360 | MS.gene45009:intron | 30.0% | |
TAAATGATTCCAAGGAAACT+TGG | + | chr6.3:68783133-68783152 | MS.gene45009:CDS | 30.0% | |
TACACAAAAAGGGTAGAATA+AGG | + | chr6.3:68781315-68781334 | MS.gene45009:intron | 30.0% | |
TATAAAGCTCTTTCTGACAA+AGG | + | chr6.3:68781900-68781919 | MS.gene45009:intron | 30.0% | |
TATCTACTCTTGTAGTATTG+AGG | - | chr6.3:68780635-68780654 | None:intergenic | 30.0% | |
TCAACATTTGTGTTCTTTGA+TGG | + | chr6.3:68784633-68784652 | MS.gene45009:CDS | 30.0% | |
TCACCATTGTCACAATATTT+GGG | + | chr6.3:68782464-68782483 | MS.gene45009:intron | 30.0% | |
TCTGTTGTCTTAGATATCAT+TGG | + | chr6.3:68783668-68783687 | MS.gene45009:intron | 30.0% | |
TCTTAAAGAAGAAAAAGAGG+AGG | - | chr6.3:68781602-68781621 | None:intergenic | 30.0% | |
TTAATAATGAACCTACTCCA+AGG | + | chr6.3:68784473-68784492 | MS.gene45009:intron | 30.0% | |
TTAATGGAATCTTACAGAGA+TGG | - | chr6.3:68782626-68782645 | None:intergenic | 30.0% | |
TTGAAAAAGAAGTGGGTATT+GGG | - | chr6.3:68783517-68783536 | None:intergenic | 30.0% | |
TTGTTATCGTTTAAGGGATT+TGG | - | chr6.3:68780334-68780353 | None:intergenic | 30.0% | |
TTGTTGGAGATAGTTAAACT+GGG | - | chr6.3:68785316-68785335 | None:intergenic | 30.0% | |
TTTGTTGGAGATAGTTAAAC+TGG | - | chr6.3:68785317-68785336 | None:intergenic | 30.0% | |
! | AAAGCTTGATGTGTTATTGT+AGG | - | chr6.3:68785441-68785460 | None:intergenic | 30.0% |
! | ATCGACTTTGTTATCGTTTA+AGG | - | chr6.3:68780341-68780360 | None:intergenic | 30.0% |
! | ATCTAATATGGAAACCCTTT+TGG | - | chr6.3:68784425-68784444 | None:intergenic | 30.0% |
! | TCGACTTTGTTATCGTTTAA+GGG | - | chr6.3:68780340-68780359 | None:intergenic | 30.0% |
! | TTATTCTACCCTTTTTGTGT+AGG | - | chr6.3:68781316-68781335 | None:intergenic | 30.0% |
! | TTTCATACATTCTAAGAGAG+AGG | - | chr6.3:68780803-68780822 | None:intergenic | 30.0% |
! | TTTTTCTCTTTTCAGACAAC+TGG | + | chr6.3:68785052-68785071 | MS.gene45009:intron | 30.0% |
!! | ATCTTGATTGGTAATGATTC+TGG | - | chr6.3:68784129-68784148 | None:intergenic | 30.0% |
!! | TAGATGCTTTAGTTTGTTCA+AGG | - | chr6.3:68784267-68784286 | None:intergenic | 30.0% |
!! | TTGTTTTGCAAGATTCTCTA+TGG | - | chr6.3:68781384-68781403 | None:intergenic | 30.0% |
!! | TTTGGTTTGTGTTAAACACT+TGG | + | chr6.3:68782872-68782891 | MS.gene45009:intron | 30.0% |
!! | TTTTGCTTTATTGTGCAGAA+TGG | + | chr6.3:68784800-68784819 | MS.gene45009:intron | 30.0% |
!!! | CAGCAATCATTTTTTTCCTA+AGG | - | chr6.3:68784695-68784714 | None:intergenic | 30.0% |
!!! | GCCATCAAATTTTAGGTTTT+TGG | + | chr6.3:68782818-68782837 | MS.gene45009:intron | 30.0% |
!!! | TTTTTTCCTAAGGTTTGATG+CGG | - | chr6.3:68784685-68784704 | None:intergenic | 30.0% |
AAACACAAAGCAAGTTGTTG+AGG | - | chr6.3:68780760-68780779 | None:intergenic | 35.0% | |
AAAGCAAACTGTTACGTTCA+AGG | - | chr6.3:68783031-68783050 | None:intergenic | 35.0% | |
AACACTTATCAGCTAGAAGA+AGG | + | chr6.3:68781448-68781467 | MS.gene45009:intron | 35.0% | |
AATCTTACAGAGATGGTGAT+GGG | - | chr6.3:68782619-68782638 | None:intergenic | 35.0% | |
AATTTCTCATGAGAGACACT+AGG | + | chr6.3:68783747-68783766 | MS.gene45009:CDS | 35.0% | |
ACACCCAAATATTGTGACAA+TGG | - | chr6.3:68782470-68782489 | None:intergenic | 35.0% | |
AGAAGAGAAAGACGACAAAT+TGG | + | chr6.3:68785607-68785626 | MS.gene45009:CDS | 35.0% | |
AGATTGAACTATTTCGCTTG+CGG | + | chr6.3:68780157-68780176 | MS.gene45009:intron | 35.0% | |
AGCAAATTTCCAAGTTTCCT+TGG | - | chr6.3:68783145-68783164 | None:intergenic | 35.0% | |
AGGAAGAGACATATTCAGTA+GGG | - | chr6.3:68783345-68783364 | None:intergenic | 35.0% | |
AGTCCCACAAAAATCATTCA+CGG | - | chr6.3:68785571-68785590 | None:intergenic | 35.0% | |
AGTGAGAGATGCTAATGAAA+TGG | - | chr6.3:68785350-68785369 | None:intergenic | 35.0% | |
ATAATGACCAAGAGATGAAG+CGG | + | chr6.3:68782204-68782223 | MS.gene45009:intron | 35.0% | |
ATACGCTATTAGCATGATCA+AGG | - | chr6.3:68781233-68781252 | None:intergenic | 35.0% | |
ATGCTTTCGGATACTTAATC+AGG | - | chr6.3:68780390-68780409 | None:intergenic | 35.0% | |
CAAAAATCATTCACGGAACA+TGG | - | chr6.3:68785564-68785583 | None:intergenic | 35.0% | |
CAATCTTTCACATTAGGGTA+TGG | + | chr6.3:68780073-68780092 | MS.gene45009:intron | 35.0% | |
CAGTCCACAGATTAACAATT+CGG | - | chr6.3:68783170-68783189 | None:intergenic | 35.0% | |
CATGCATTTGTAACACATAC+CGG | - | chr6.3:68784098-68784117 | None:intergenic | 35.0% | |
CATTGCTTTATCGAAAGTGA+TGG | + | chr6.3:68781628-68781647 | MS.gene45009:intron | 35.0% | |
CCTTGTCATCATTAAAGGTT+CGG | - | chr6.3:68781929-68781948 | None:intergenic | 35.0% | |
CTCACTACCATTTCTTCTAA+TGG | + | chr6.3:68781779-68781798 | MS.gene45009:intron | 35.0% | |
CTGTAGTTGACCATCTAATA+TGG | - | chr6.3:68784437-68784456 | None:intergenic | 35.0% | |
CTTGAAAAAGAAGTGGGTAT+TGG | - | chr6.3:68783518-68783537 | None:intergenic | 35.0% | |
GAAGAGAAAGACGACAAATT+GGG | + | chr6.3:68785608-68785627 | MS.gene45009:CDS | 35.0% | |
GATTCAACTCAAGATCACTT+TGG | - | chr6.3:68780733-68780752 | None:intergenic | 35.0% | |
GCATATTCAAATGGTCGTAA+TGG | + | chr6.3:68783212-68783231 | MS.gene45009:CDS | 35.0% | |
GTAAACTATGCAAGAGATGA+AGG | + | chr6.3:68780673-68780692 | MS.gene45009:intron | 35.0% | |
GTCCTTAGAGAAGACTATAA+TGG | - | chr6.3:68782015-68782034 | None:intergenic | 35.0% | |
GTTCATTGCTCCAATGAAAA+GGG | + | chr6.3:68782077-68782096 | MS.gene45009:intron | 35.0% | |
TACGCTATTAGCATGATCAA+GGG | - | chr6.3:68781232-68781251 | None:intergenic | 35.0% | |
TCAAAACACGTTCTGTAATG+AGG | + | chr6.3:68784912-68784931 | MS.gene45009:CDS | 35.0% | |
TCACTTTCGATAAAGCAATG+CGG | - | chr6.3:68781628-68781647 | None:intergenic | 35.0% | |
TCGAATCCAAAAGTTTCCAT+CGG | - | chr6.3:68779867-68779886 | None:intergenic | 35.0% | |
TGCCATTATAGTCTTCTCTA+AGG | + | chr6.3:68782010-68782029 | MS.gene45009:intron | 35.0% | |
TGTGTAGGAAAATACAAGCA+AGG | - | chr6.3:68781301-68781320 | None:intergenic | 35.0% | |
TGTTGGAGATAGTTAAACTG+GGG | - | chr6.3:68785315-68785334 | None:intergenic | 35.0% | |
TTAACAACAGGATGAAGACT+TGG | + | chr6.3:68783083-68783102 | MS.gene45009:intron | 35.0% | |
TTGCTCAAACTTGTCTGATT+GGG | + | chr6.3:68782509-68782528 | MS.gene45009:intron | 35.0% | |
TTTGCTCAAACTTGTCTGAT+TGG | + | chr6.3:68782508-68782527 | MS.gene45009:intron | 35.0% | |
! | AACTATAAGTTGCTTTGGAC+TGG | + | chr6.3:68783454-68783473 | MS.gene45009:CDS | 35.0% |
! | ACATTTTCTCTTTTGATGCC+AGG | + | chr6.3:68784316-68784335 | MS.gene45009:intron | 35.0% |
! | ACGATGTGTTCATTAGTTTC+AGG | + | chr6.3:68781841-68781860 | MS.gene45009:intron | 35.0% |
! | ACGGTTATTCCTGTTTTCTT+TGG | + | chr6.3:68782104-68782123 | MS.gene45009:intron | 35.0% |
! | AGCTTTCTTACCTCTCTTTT+AGG | - | chr6.3:68780850-68780869 | None:intergenic | 35.0% |
! | ATGGAAACTTTTGGATTCGA+CGG | + | chr6.3:68779867-68779886 | MS.gene45009:CDS | 35.0% |
! | CGATGTGTTCATTAGTTTCA+GGG | + | chr6.3:68781842-68781861 | MS.gene45009:intron | 35.0% |
! | GATGTGTTCATTAGTTTCAG+GGG | + | chr6.3:68781843-68781862 | MS.gene45009:intron | 35.0% |
! | GTTCCGTGAATGATTTTTGT+GGG | + | chr6.3:68785565-68785584 | MS.gene45009:CDS | 35.0% |
! | TAGAAATAACGATGTCGCTT+TGG | - | chr6.3:68780288-68780307 | None:intergenic | 35.0% |
! | TCAGCAAATCTTTTTCCTTC+AGG | - | chr6.3:68785531-68785550 | None:intergenic | 35.0% |
! | TGTTCCGTGAATGATTTTTG+TGG | + | chr6.3:68785564-68785583 | MS.gene45009:CDS | 35.0% |
! | TTTGAAGACAACCTTTTTGC+AGG | - | chr6.3:68785272-68785291 | None:intergenic | 35.0% |
!! | AAGGGAAGCATCAAAATGAA+CGG | - | chr6.3:68781559-68781578 | None:intergenic | 35.0% |
!! | ACAGAACGTGTTTTGAATGT+TGG | - | chr6.3:68784908-68784927 | None:intergenic | 35.0% |
!! | CAATACCCACTTCTTTTTCA+AGG | + | chr6.3:68783516-68783535 | MS.gene45009:CDS | 35.0% |
!! | CTTTAGAGCATGCATATGTT+TGG | - | chr6.3:68785374-68785393 | None:intergenic | 35.0% |
!! | GATCATTTTAGCAAGATGTG+AGG | + | chr6.3:68781684-68781703 | MS.gene45009:intron | 35.0% |
!! | GATTTTAGTGAGATACAGAG+TGG | + | chr6.3:68783538-68783557 | MS.gene45009:CDS | 35.0% |
!!! | AACAGCTTTTTTTCGAACAG+GGG | - | chr6.3:68784851-68784870 | None:intergenic | 35.0% |
!!! | CAACAGCTTTTTTTCGAACA+GGG | - | chr6.3:68784852-68784871 | None:intergenic | 35.0% |
!!! | CACCTTGTTAGTTTTTGCAA+CGG | - | chr6.3:68784357-68784376 | None:intergenic | 35.0% |
!!! | TCAACAGCTTTTTTTCGAAC+AGG | - | chr6.3:68784853-68784872 | None:intergenic | 35.0% |
AAGACGACAAATTGGGAAGA+AGG | + | chr6.3:68785615-68785634 | MS.gene45009:CDS | 40.0% | |
ACTGAGTATGATCCAGAGAA+TGG | + | chr6.3:68785233-68785252 | MS.gene45009:CDS | 40.0% | |
ACTGCTTGTAACAAGAATGG+GGG | + | chr6.3:68783186-68783205 | MS.gene45009:CDS | 40.0% | |
ATACTTAATCAGGCTGGACA+CGG | - | chr6.3:68780380-68780399 | None:intergenic | 40.0% | |
ATCATACTCAGTTGTAGCAG+AGG | - | chr6.3:68785225-68785244 | None:intergenic | 40.0% | |
ATCGTAGCTGAAATCAGTAG+AGG | - | chr6.3:68781826-68781845 | None:intergenic | 40.0% | |
CAAGATCACTTTGGACATGA+AGG | - | chr6.3:68780724-68780743 | None:intergenic | 40.0% | |
CAGGAAGAGACATATTCAGT+AGG | - | chr6.3:68783346-68783365 | None:intergenic | 40.0% | |
CAGTGAATGACCTAAAAGAG+AGG | + | chr6.3:68780837-68780856 | MS.gene45009:intron | 40.0% | |
CCGAACCTTTAATGATGACA+AGG | + | chr6.3:68781926-68781945 | MS.gene45009:intron | 40.0% | |
CGAATACAACTCCTGCAAAA+AGG | + | chr6.3:68785258-68785277 | MS.gene45009:CDS | 40.0% | |
CGGTATGTGTTACAAATGCA+TGG | + | chr6.3:68784096-68784115 | MS.gene45009:CDS | 40.0% | |
CGTTCATTGCTCCAATGAAA+AGG | + | chr6.3:68782076-68782095 | MS.gene45009:intron | 40.0% | |
CGTTGCAAAAACTAACAAGG+TGG | + | chr6.3:68784355-68784374 | MS.gene45009:CDS | 40.0% | |
CTAACAAGGTGGTTACTTCA+AGG | + | chr6.3:68784366-68784385 | MS.gene45009:CDS | 40.0% | |
CTACTGAATATGTCTCTTCC+TGG | + | chr6.3:68783344-68783363 | MS.gene45009:CDS | 40.0% | |
CTATGGTATTCAGGGTGAAA+TGG | + | chr6.3:68784879-68784898 | MS.gene45009:CDS | 40.0% | |
CTGTCCGAATTGTTAATCTG+TGG | + | chr6.3:68783163-68783182 | MS.gene45009:CDS | 40.0% | |
CTTGCTGAACTGTACTTTGT+GGG | + | chr6.3:68783864-68783883 | MS.gene45009:CDS | 40.0% | |
GAAAGATTGTTCGTTCTGTG+TGG | + | chr6.3:68782421-68782440 | MS.gene45009:intron | 40.0% | |
GAATCTTACAGAGATGGTGA+TGG | - | chr6.3:68782620-68782639 | None:intergenic | 40.0% | |
GACCGTTGCAAAAACTAACA+AGG | + | chr6.3:68784352-68784371 | MS.gene45009:CDS | 40.0% | |
GACTGCTTGTAACAAGAATG+GGG | + | chr6.3:68783185-68783204 | MS.gene45009:CDS | 40.0% | |
GACTTTCCTTAACTCAGTTG+AGG | + | chr6.3:68784949-68784968 | MS.gene45009:CDS | 40.0% | |
GAGCTCCTTGTCATCATTAA+AGG | - | chr6.3:68781934-68781953 | None:intergenic | 40.0% | |
GAGGAGTTAGAGAAAGAAGA+TGG | - | chr6.3:68781807-68781826 | None:intergenic | 40.0% | |
GATGGAGCCATTAGAAGAAA+TGG | - | chr6.3:68781789-68781808 | None:intergenic | 40.0% | |
GCAAGAAACGTCAAAGTTCA+AGG | - | chr6.3:68781277-68781296 | None:intergenic | 40.0% | |
GCAATCACAGAATGATCATG+TGG | + | chr6.3:68785105-68785124 | MS.gene45009:CDS | 40.0% | |
GGACTGCTTGTAACAAGAAT+GGG | + | chr6.3:68783184-68783203 | MS.gene45009:CDS | 40.0% | |
GGTCAACTACAGTGTGAAAA+TGG | + | chr6.3:68784445-68784464 | MS.gene45009:intron | 40.0% | |
GTGTTACATGTGCACCAAAA+GGG | + | chr6.3:68784408-68784427 | MS.gene45009:CDS | 40.0% | |
GTTGTATTCGAACCATTCTC+TGG | - | chr6.3:68785248-68785267 | None:intergenic | 40.0% | |
TAAATGGAAACCAGACTGCA+CGG | + | chr6.3:68783802-68783821 | MS.gene45009:intron | 40.0% | |
TAAATGGTTAGTGAGGACCT+TGG | - | chr6.3:68784493-68784512 | None:intergenic | 40.0% | |
TACCTCTTCTTTCAGCAGTT+TGG | - | chr6.3:68784975-68784994 | None:intergenic | 40.0% | |
TCATACTCAGTTGTAGCAGA+GGG | - | chr6.3:68785224-68785243 | None:intergenic | 40.0% | |
TGACACTCGATTCAGTTTCA+CGG | + | chr6.3:68781869-68781888 | MS.gene45009:intron | 40.0% | |
TGATTAAACGTAACTCCCTG+TGG | - | chr6.3:68780041-68780060 | None:intergenic | 40.0% | |
TGGACTGCTTGTAACAAGAA+TGG | + | chr6.3:68783183-68783202 | MS.gene45009:CDS | 40.0% | |
TGTGTGGTTGTGGTTAGATA+GGG | + | chr6.3:68781473-68781492 | MS.gene45009:intron | 40.0% | |
TGTGTTACAAATGCATGGAG+TGG | + | chr6.3:68784101-68784120 | MS.gene45009:CDS | 40.0% | |
TTCTTTCAGATCATCTCTCC+AGG | - | chr6.3:68783365-68783384 | None:intergenic | 40.0% | |
TTGTGTATATCGTCTCCACA+GGG | + | chr6.3:68780023-68780042 | MS.gene45009:intron | 40.0% | |
TTTCGGATACTTAATCAGGC+TGG | - | chr6.3:68780386-68780405 | None:intergenic | 40.0% | |
TTTGTGTATATCGTCTCCAC+AGG | + | chr6.3:68780022-68780041 | MS.gene45009:intron | 40.0% | |
! | ACTTGCTGAACTGTACTTTG+TGG | + | chr6.3:68783863-68783882 | MS.gene45009:CDS | 40.0% |
! | TCTTTTTCCTTCAGGCTTAC+TGG | - | chr6.3:68785523-68785542 | None:intergenic | 40.0% |
! | TGGAAACTTTTGGATTCGAC+GGG | + | chr6.3:68779868-68779887 | MS.gene45009:CDS | 40.0% |
! | TTCAGTTTTCGCACATGAGA+AGG | - | chr6.3:68782137-68782156 | None:intergenic | 40.0% |
! | TTTTCGCACATGAGAAGGTT+CGG | - | chr6.3:68782132-68782151 | None:intergenic | 40.0% |
!! | AATGGTCGTAATGGATGCTA+AGG | + | chr6.3:68783221-68783240 | MS.gene45009:CDS | 40.0% |
!! | CATTTTAGCAAGATGTGAGG+TGG | + | chr6.3:68781687-68781706 | MS.gene45009:intron | 40.0% |
!! | TGTTTCAGGGCATTGATTTG+TGG | - | chr6.3:68784230-68784249 | None:intergenic | 40.0% |
!!! | GTCTATCTTTTAGGGTCGTA+GGG | + | chr6.3:68783306-68783325 | MS.gene45009:intron | 40.0% |
!!! | TGTCTATCTTTTAGGGTCGT+AGG | + | chr6.3:68783305-68783324 | MS.gene45009:intron | 40.0% |
AACCAAGCTGCTAACTTAGC+TGG | + | chr6.3:68782251-68782270 | MS.gene45009:intron | 45.0% | |
AAGCCCATTGGCCAGATTAT+AGG | - | chr6.3:68780942-68780961 | None:intergenic | 45.0% | |
AAGGTGGTTACTTCAAGGAG+TGG | + | chr6.3:68784371-68784390 | MS.gene45009:CDS | 45.0% | |
ACGCTAATAGCGTGGTAAGT+CGG | + | chr6.3:68780916-68780935 | MS.gene45009:intron | 45.0% | |
AGATGAAGCGGTTGGAGAAA+TGG | + | chr6.3:68782216-68782235 | MS.gene45009:intron | 45.0% | |
AGTTTGACCAATCAGACAGG+GGG | + | chr6.3:68783910-68783929 | MS.gene45009:CDS | 45.0% | |
ATGCGGAGATTCCTAAGAGT+TGG | - | chr6.3:68784668-68784687 | None:intergenic | 45.0% | |
CAGATCTACATCTTGGCTGA+AGG | + | chr6.3:68779940-68779959 | MS.gene45009:CDS | 45.0% | |
CAGTTTGACCAATCAGACAG+GGG | + | chr6.3:68783909-68783928 | MS.gene45009:CDS | 45.0% | |
CATACTCAGTTGTAGCAGAG+GGG | - | chr6.3:68785223-68785242 | None:intergenic | 45.0% | |
CATTGGAGCAATGAACGATG+TGG | - | chr6.3:68782073-68782092 | None:intergenic | 45.0% | |
CTCCAATGAAAAGGGTAGCA+CGG | + | chr6.3:68782085-68782104 | MS.gene45009:intron | 45.0% | |
CTGAAGCCAGATCTACATCT+TGG | + | chr6.3:68779933-68779952 | MS.gene45009:CDS | 45.0% | |
CTGTGTGGTTGTGGTTAGAT+AGG | + | chr6.3:68781472-68781491 | MS.gene45009:intron | 45.0% | |
CTTCAGCCAAGATGTAGATC+TGG | - | chr6.3:68779942-68779961 | None:intergenic | 45.0% | |
GAAGGCAGTTTGGATGTTGA+AGG | + | chr6.3:68779958-68779977 | MS.gene45009:intron | 45.0% | |
GAATCTCCGCATCAAACCTT+AGG | + | chr6.3:68784676-68784695 | MS.gene45009:CDS | 45.0% | |
GACACTCGATTCAGTTTCAC+GGG | + | chr6.3:68781870-68781889 | MS.gene45009:intron | 45.0% | |
GATGTGAGGTGGAAGGAAAA+AGG | + | chr6.3:68781698-68781717 | MS.gene45009:intron | 45.0% | |
GCAGTTTGACCAATCAGACA+GGG | + | chr6.3:68783908-68783927 | MS.gene45009:CDS | 45.0% | |
GGACATGAAGGATCTTGACA+TGG | - | chr6.3:68780712-68780731 | None:intergenic | 45.0% | |
GGAGTTGACATCTGATGTTG+TGG | + | chr6.3:68785485-68785504 | MS.gene45009:intron | 45.0% | |
GTGTGATTTCATCGCCTCTT+CGG | - | chr6.3:68781956-68781975 | None:intergenic | 45.0% | |
GTTATGAAGAGCTACGCTAG+TGG | - | chr6.3:68781054-68781073 | None:intergenic | 45.0% | |
GTTGACATCTGATGTTGTGG+AGG | + | chr6.3:68785488-68785507 | MS.gene45009:CDS | 45.0% | |
GTTTGGCCTCAACTGAGTTA+AGG | - | chr6.3:68784958-68784977 | None:intergenic | 45.0% | |
TATACCAGTTGCAGGCTGAA+TGG | - | chr6.3:68783971-68783990 | None:intergenic | 45.0% | |
TCAATGCTCTTGAGGAGTGA+AGG | - | chr6.3:68781978-68781997 | None:intergenic | 45.0% | |
TCGAGTCTTCAATGCTCTTG+AGG | - | chr6.3:68781986-68782005 | None:intergenic | 45.0% | |
TGCGGAGATTCCTAAGAGTT+GGG | - | chr6.3:68784667-68784686 | None:intergenic | 45.0% | |
TGGTAAGTCGGCCTATAATC+TGG | + | chr6.3:68780928-68780947 | MS.gene45009:intron | 45.0% | |
TGGTTACTTCAAGGAGTGGA+TGG | + | chr6.3:68784375-68784394 | MS.gene45009:CDS | 45.0% | |
TTAGCAAGATGTGAGGTGGA+AGG | + | chr6.3:68781691-68781710 | MS.gene45009:intron | 45.0% | |
TTAGCGTATTCAGTCCAGAG+AGG | - | chr6.3:68781116-68781135 | None:intergenic | 45.0% | |
TTTCAGTGTGCCTCCGTAAT+AGG | + | chr6.3:68783565-68783584 | MS.gene45009:CDS | 45.0% | |
TTTCCTTCAGGCTTACTGGT+AGG | - | chr6.3:68785519-68785538 | None:intergenic | 45.0% | |
! | AACCGTGCTACCCTTTTCAT+TGG | - | chr6.3:68782090-68782109 | None:intergenic | 45.0% |
! | CAAGATGTAGATCTGGCTTC+AGG | - | chr6.3:68779935-68779954 | None:intergenic | 45.0% |
! | GAGATTGCTGTTGTTACGCT+TGG | - | chr6.3:68780196-68780215 | None:intergenic | 45.0% |
! | GATCTGGAGCAAGAGATCAT+CGG | + | chr6.3:68779813-68779832 | MS.gene45009:CDS | 45.0% |
! | GGTGTTACATGTGCACCAAA+AGG | + | chr6.3:68784407-68784426 | MS.gene45009:CDS | 45.0% |
! | TGGGGGAGAGCATATTCAAA+TGG | + | chr6.3:68783203-68783222 | MS.gene45009:CDS | 45.0% |
!! | AGAGAAGAGAGCGTTTAGGA+TGG | + | chr6.3:68781501-68781520 | MS.gene45009:intron | 45.0% |
!! | AGAGAGAGAAGAGAGCGTTT+AGG | + | chr6.3:68781497-68781516 | MS.gene45009:intron | 45.0% |
!! | GGGTGGTTTGTTGTGTGTTT+CGG | - | chr6.3:68779841-68779860 | None:intergenic | 45.0% |
!! | TCAAGAGCATTGAAGACTCG+AGG | + | chr6.3:68781985-68782004 | MS.gene45009:intron | 45.0% |
!!! | AGCTTTTTTTCGAACAGGGG+TGG | - | chr6.3:68784848-68784867 | None:intergenic | 45.0% |
!!! | TTTTTTTATTATATCATAAT+AGG | + | chr6.3:68784571-68784590 | MS.gene45009:intron | 5.0% |
AAACTTGTCTGATTGGGCGC+AGG | + | chr6.3:68782515-68782534 | MS.gene45009:intron | 50.0% | |
ACGCTATTAGCGTACCTCTC+TGG | + | chr6.3:68781099-68781118 | MS.gene45009:intron | 50.0% | |
ACGCTATTGGCGTATCTCTC+TGG | + | chr6.3:68781196-68781215 | MS.gene45009:intron | 50.0% | |
ACTCCAGAGAGCTACGCTAA+TGG | - | chr6.3:68781006-68781025 | None:intergenic | 50.0% | |
ACTCCTACCAGTAAGCCTGA+AGG | + | chr6.3:68785513-68785532 | MS.gene45009:CDS | 50.0% | |
AGATACACGCTATCAGCGTG+AGG | - | chr6.3:68781146-68781165 | None:intergenic | 50.0% | |
AGATACGCCAATAGCGTACC+TGG | - | chr6.3:68781193-68781212 | None:intergenic | 50.0% | |
AGCCAGCTAAGTTAGCAGCT+TGG | - | chr6.3:68782256-68782275 | None:intergenic | 50.0% | |
AGGAGTGGATGGACATACGA+TGG | + | chr6.3:68784386-68784405 | MS.gene45009:CDS | 50.0% | |
AGGTACGCTAATAGCGTACC+TGG | - | chr6.3:68781096-68781115 | None:intergenic | 50.0% | |
ATACGCCAATAGCGTACCTG+GGG | - | chr6.3:68781191-68781210 | None:intergenic | 50.0% | |
CAGCTAGAAGAAGGACTGTG+TGG | + | chr6.3:68781457-68781476 | MS.gene45009:intron | 50.0% | |
CATCTTGGCTGAAGGCAGTT+TGG | + | chr6.3:68779948-68779967 | MS.gene45009:intron | 50.0% | |
CCAAAAGTTTCCATCGGCGA+GGG | - | chr6.3:68779861-68779880 | None:intergenic | 50.0% | |
CGCAGTTTGACCAATCAGAC+AGG | + | chr6.3:68783907-68783926 | MS.gene45009:CDS | 50.0% | |
CGGCCTATAATCTGGCCAAT+GGG | + | chr6.3:68780936-68780955 | MS.gene45009:intron | 50.0% | |
GAAGAAGGACTGTGTGGTTG+TGG | + | chr6.3:68781463-68781482 | MS.gene45009:intron | 50.0% | |
GATACGCCAATAGCGTACCT+GGG | - | chr6.3:68781192-68781211 | None:intergenic | 50.0% | |
GGAGTTTGCACCCAACTCTT+AGG | + | chr6.3:68784654-68784673 | MS.gene45009:CDS | 50.0% | |
GGCAGTTTGGATGTTGAAGG+AGG | + | chr6.3:68779961-68779980 | MS.gene45009:intron | 50.0% | |
GGCCAAACTGCTGAAAGAAG+AGG | + | chr6.3:68784970-68784989 | MS.gene45009:CDS | 50.0% | |
GTACCTACGCTAATAGCGCA+AGG | + | chr6.3:68780892-68780911 | MS.gene45009:intron | 50.0% | |
GTACCTTGCGCTATTAGCGT+AGG | - | chr6.3:68780898-68780917 | None:intergenic | 50.0% | |
GTATTGTCCCCCTGTCTGAT+TGG | - | chr6.3:68783920-68783939 | None:intergenic | 50.0% | |
GTGAGGTGGAAGGAAAAAGG+AGG | + | chr6.3:68781701-68781720 | MS.gene45009:intron | 50.0% | |
GTTAGTGAGGACCTTGGAGT+AGG | - | chr6.3:68784487-68784506 | None:intergenic | 50.0% | |
TAATAGCGTACCTGGAGCGT+AGG | - | chr6.3:68781088-68781107 | None:intergenic | 50.0% | |
TCCAAAAGTTTCCATCGGCG+AGG | - | chr6.3:68779862-68779881 | None:intergenic | 50.0% | |
TCGGCCTATAATCTGGCCAA+TGG | + | chr6.3:68780935-68780954 | MS.gene45009:intron | 50.0% | |
TCTCCAACCGCTTCATCTCT+TGG | - | chr6.3:68782214-68782233 | None:intergenic | 50.0% | |
TCTCTTGCTCCAGATCCTCT+TGG | - | chr6.3:68779809-68779828 | None:intergenic | 50.0% | |
TGACCAAGAGATGAAGCGGT+TGG | + | chr6.3:68782208-68782227 | MS.gene45009:intron | 50.0% | |
TTAGTACAGTCCGTGCAGTC+TGG | - | chr6.3:68783815-68783834 | None:intergenic | 50.0% | |
TTGGATTCGACGGGAAAGAG+AGG | + | chr6.3:68779877-68779896 | MS.gene45009:CDS | 50.0% | |
! | GATGTAGATCTGGCTTCAGG+TGG | - | chr6.3:68779932-68779951 | None:intergenic | 50.0% |
! | TTTTGCAACGGTCACGCAAC+AGG | - | chr6.3:68784345-68784364 | None:intergenic | 50.0% |
!! | GGTTCGGTGCCAAAGAAAAC+AGG | - | chr6.3:68782116-68782135 | None:intergenic | 50.0% |
!! | TGGCGTATCTCTCTGGAGTT+TGG | + | chr6.3:68781203-68781222 | MS.gene45009:intron | 50.0% |
AAAGTTTCCATCGGCGAGGG+TGG | - | chr6.3:68779858-68779877 | None:intergenic | 55.0% | |
AACTTCTGCTCCTACGCTCC+AGG | + | chr6.3:68781075-68781094 | MS.gene45009:intron | 55.0% | |
ACGCCATTAGCGTAGCTCTC+TGG | + | chr6.3:68781000-68781019 | MS.gene45009:intron | 55.0% | |
AGAGAGCTACGCTAATGGCG+TGG | - | chr6.3:68781001-68781020 | None:intergenic | 55.0% | |
CATCGCCACTTCTTCTCCGA+CGG | + | chr6.3:68782591-68782610 | MS.gene45009:intron | 55.0% | |
CGCAAGGTACGCTAATAGCG+TGG | + | chr6.3:68780908-68780927 | MS.gene45009:intron | 55.0% | |
CGGAGAAGAAGTGGCGATGA+TGG | - | chr6.3:68782590-68782609 | None:intergenic | 55.0% | |
GATGACAAGGAGCTCCGAAG+AGG | + | chr6.3:68781939-68781958 | MS.gene45009:intron | 55.0% | |
GATTCGACGGGAAAGAGAGG+TGG | + | chr6.3:68779880-68779899 | MS.gene45009:CDS | 55.0% | |
GCGACGAAACCAAGAGGATC+TGG | + | chr6.3:68779797-68779816 | MS.gene45009:CDS | 55.0% | |
TCTGATTGGGCGCAGGAAAG+AGG | + | chr6.3:68782522-68782541 | MS.gene45009:intron | 55.0% | |
TGGAGCGTAGGAGCAGAAGT+TGG | - | chr6.3:68781076-68781095 | None:intergenic | 55.0% | |
! | CCCTCGCCGATGGAAACTTT+TGG | + | chr6.3:68779858-68779877 | MS.gene45009:CDS | 55.0% |
!! | CGATGTCGCTTTGGACACGA+AGG | - | chr6.3:68780279-68780298 | None:intergenic | 55.0% |
!! | GAGATGGTGATGGGTTCCGT+CGG | - | chr6.3:68782610-68782629 | None:intergenic | 55.0% |
AGCTACGCTAATGGCGTGGC+TGG | - | chr6.3:68780997-68781016 | None:intergenic | 60.0% | |
CAACAAACCACCCTCGCCGA+TGG | + | chr6.3:68779848-68779867 | MS.gene45009:CDS | 60.0% | |
CCAACGTGGCACAAGCCCAT+TGG | - | chr6.3:68780954-68780973 | None:intergenic | 60.0% | |
CGGTCACGCAACAGGTTTCC+TGG | - | chr6.3:68784337-68784356 | None:intergenic | 60.0% | |
CGTACCTGGGGCGTGATTCT+GGG | - | chr6.3:68781179-68781198 | None:intergenic | 60.0% | |
GAAGCAGGGCAAAGCCAACG+TGG | - | chr6.3:68780968-68780987 | None:intergenic | 60.0% | |
GCAGCCATTCAGCCTGCAAC+TGG | + | chr6.3:68783964-68783983 | MS.gene45009:CDS | 60.0% | |
GGGTTCCGTCGGAGAAGAAG+TGG | - | chr6.3:68782599-68782618 | None:intergenic | 60.0% | |
GTGGCTGGAGCGTAGAAGCA+GGG | - | chr6.3:68780982-68781001 | None:intergenic | 60.0% | |
TCACGCCCCAGGTACGCTAT+TGG | + | chr6.3:68781183-68781202 | MS.gene45009:intron | 60.0% | |
! | CCAATGGGCTTGTGCCACGT+TGG | + | chr6.3:68780951-68780970 | MS.gene45009:intron | 60.0% |
CGTGGCTGGAGCGTAGAAGC+AGG | - | chr6.3:68780983-68781002 | None:intergenic | 65.0% | |
GCGTACCTGGGGCGTGATTC+TGG | - | chr6.3:68781180-68781199 | None:intergenic | 65.0% | |
GTGCTCGCGTCGCTTCTCGA+CGG | - | chr6.3:68779908-68779927 | None:intergenic | 65.0% | |
TCTGCCCAGAATCACGCCCC+AGG | + | chr6.3:68781172-68781191 | MS.gene45009:intron | 65.0% | |
TGCTCGCGTCGCTTCTCGAC+GGG | - | chr6.3:68779907-68779926 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.3 | gene | 68779794 | 68785647 | 68779794 | ID=MS.gene45009 |
chr6.3 | mRNA | 68779794 | 68785647 | 68779794 | ID=MS.gene45009.t1;Parent=MS.gene45009 |
chr6.3 | exon | 68779794 | 68779964 | 68779794 | ID=MS.gene45009.t1.exon1;Parent=MS.gene45009.t1 |
chr6.3 | CDS | 68779794 | 68779964 | 68779794 | ID=cds.MS.gene45009.t1;Parent=MS.gene45009.t1 |
chr6.3 | exon | 68783093 | 68783242 | 68783093 | ID=MS.gene45009.t1.exon2;Parent=MS.gene45009.t1 |
chr6.3 | CDS | 68783093 | 68783242 | 68783093 | ID=cds.MS.gene45009.t1;Parent=MS.gene45009.t1 |
chr6.3 | exon | 68783319 | 68783586 | 68783319 | ID=MS.gene45009.t1.exon3;Parent=MS.gene45009.t1 |
chr6.3 | CDS | 68783319 | 68783586 | 68783319 | ID=cds.MS.gene45009.t1;Parent=MS.gene45009.t1 |
chr6.3 | exon | 68783681 | 68783768 | 68783681 | ID=MS.gene45009.t1.exon4;Parent=MS.gene45009.t1 |
chr6.3 | CDS | 68783681 | 68783768 | 68783681 | ID=cds.MS.gene45009.t1;Parent=MS.gene45009.t1 |
chr6.3 | exon | 68783858 | 68783985 | 68783858 | ID=MS.gene45009.t1.exon5;Parent=MS.gene45009.t1 |
chr6.3 | CDS | 68783858 | 68783985 | 68783858 | ID=cds.MS.gene45009.t1;Parent=MS.gene45009.t1 |
chr6.3 | exon | 68784087 | 68784250 | 68784087 | ID=MS.gene45009.t1.exon6;Parent=MS.gene45009.t1 |
chr6.3 | CDS | 68784087 | 68784250 | 68784087 | ID=cds.MS.gene45009.t1;Parent=MS.gene45009.t1 |
chr6.3 | exon | 68784338 | 68784429 | 68784338 | ID=MS.gene45009.t1.exon7;Parent=MS.gene45009.t1 |
chr6.3 | CDS | 68784338 | 68784429 | 68784338 | ID=cds.MS.gene45009.t1;Parent=MS.gene45009.t1 |
chr6.3 | exon | 68784593 | 68784713 | 68784593 | ID=MS.gene45009.t1.exon8;Parent=MS.gene45009.t1 |
chr6.3 | CDS | 68784593 | 68784713 | 68784593 | ID=cds.MS.gene45009.t1;Parent=MS.gene45009.t1 |
chr6.3 | exon | 68784818 | 68784991 | 68784818 | ID=MS.gene45009.t1.exon9;Parent=MS.gene45009.t1 |
chr6.3 | CDS | 68784818 | 68784991 | 68784818 | ID=cds.MS.gene45009.t1;Parent=MS.gene45009.t1 |
chr6.3 | exon | 68785067 | 68785126 | 68785067 | ID=MS.gene45009.t1.exon10;Parent=MS.gene45009.t1 |
chr6.3 | CDS | 68785067 | 68785126 | 68785067 | ID=cds.MS.gene45009.t1;Parent=MS.gene45009.t1 |
chr6.3 | exon | 68785209 | 68785295 | 68785209 | ID=MS.gene45009.t1.exon11;Parent=MS.gene45009.t1 |
chr6.3 | CDS | 68785209 | 68785295 | 68785209 | ID=cds.MS.gene45009.t1;Parent=MS.gene45009.t1 |
chr6.3 | exon | 68785486 | 68785647 | 68785486 | ID=MS.gene45009.t1.exon12;Parent=MS.gene45009.t1 |
chr6.3 | CDS | 68785486 | 68785647 | 68785486 | ID=cds.MS.gene45009.t1;Parent=MS.gene45009.t1 |
Gene Sequence |
Protein sequence |