AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene45483

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene45483.t1 MTR_2g096690 100.000 141 0 0 1 141 1 141 1.57e-102 293
MS.gene45483.t1 MTR_2g096690 100.000 141 0 0 1 141 1 141 2.32e-102 292
MS.gene45483.t1 MTR_4g063490 95.745 141 6 0 1 141 1 141 5.03e-89 259
MS.gene45483.t1 MTR_2g096690 99.138 116 1 0 1 116 1 116 1.04e-83 243
MS.gene45483.t1 MTR_8g468530 39.007 141 72 2 1 141 17 143 3.61e-29 107
MS.gene45483.t1 MTR_4g108080 39.007 141 72 2 1 141 1 127 8.97e-29 105
MS.gene45483.t1 MTR_7g116940 39.855 138 69 2 4 141 1 124 4.54e-28 103
MS.gene45483.t1 MTR_4g073240 39.130 138 70 2 4 141 1 124 6.68e-27 100
MS.gene45483.t1 MTR_1g021150 40.152 132 65 2 4 135 1 118 9.12e-27 100
MS.gene45483.t1 MTR_3g062450 39.130 138 70 2 4 141 1 124 1.19e-26 99.8
MS.gene45483.t1 MTR_5g075580 39.130 138 70 2 4 141 1 124 1.24e-26 99.8
MS.gene45483.t1 MTR_8g071040 37.956 137 71 2 5 141 2 124 1.82e-25 96.7
MS.gene45483.t1 MTR_7g116940 37.931 145 69 3 4 141 1 131 4.94e-25 95.9
MS.gene45483.t1 MTR_7g116940 38.793 116 57 2 5 120 2 103 3.88e-22 87.8
MS.gene45483.t1 MTR_4g076200 38.346 133 68 2 9 141 37 155 6.64e-22 88.6
MS.gene45483.t1 MTR_4g108080 35.772 123 65 2 1 123 1 109 7.41e-22 86.7
MS.gene45483.t1 MTR_4g108080 37.931 116 51 2 34 141 25 127 1.28e-21 87.0
MS.gene45483.t1 MTR_4g073240 37.963 108 54 1 34 141 1 95 1.45e-21 85.9
MS.gene45483.t1 MTR_3g110110 33.333 141 77 4 2 140 3 128 2.98e-21 86.3
MS.gene45483.t1 MTR_1g021150 39.091 110 53 2 26 135 31 126 3.52e-21 85.9
MS.gene45483.t1 MTR_4g076200 39.286 112 55 1 30 141 16 114 7.07e-21 84.7
MS.gene45483.t1 MTR_5g075580 37.037 108 55 1 34 141 1 95 7.26e-21 84.0
MS.gene45483.t1 MTR_5g009020 37.594 133 69 2 9 141 37 155 2.09e-20 84.3
MS.gene45483.t1 MTR_2g078010 31.973 147 76 3 11 147 12 144 3.74e-20 83.2
MS.gene45483.t1 MTR_2g078010 33.600 125 69 2 11 135 12 122 7.90e-20 82.4
MS.gene45483.t1 MTR_1g095510 36.691 139 75 1 3 141 40 165 1.94e-19 82.4
MS.gene45483.t1 MTR_8g085690 34.615 130 71 2 2 131 20 135 5.32e-19 80.5
MS.gene45483.t1 MTR_5g016630 38.889 108 55 2 33 140 37 133 7.57e-19 80.1
MS.gene45483.t1 MTR_4g094872 34.028 144 80 2 1 140 1 133 1.08e-18 79.3
MS.gene45483.t1 MTR_1g095510 39.286 112 55 1 30 141 13 111 4.41e-18 77.4
MS.gene45483.t1 MTR_3g098780 29.630 135 79 4 9 141 7 127 1.21e-16 75.1
MS.gene45483.t1 MTR_3g098780 29.630 135 79 4 9 141 31 151 1.73e-16 75.1
MS.gene45483.t1 MTR_2g078010 30.216 139 69 3 11 135 12 136 8.54e-16 72.0
MS.gene45483.t1 MTR_2g078010 31.579 114 64 2 11 124 12 111 9.36e-16 70.5
MS.gene45483.t1 MTR_1g095510 34.400 125 69 1 3 127 40 151 1.61e-15 71.6
MS.gene45483.t1 MTR_5g019480 29.167 120 69 2 40 159 15 118 9.96e-13 63.2
MS.gene45483.t1 MTR_5g019480 29.167 120 69 2 40 159 66 169 1.16e-12 63.9
MS.gene45483.t1 MTR_5g019480 29.167 120 69 2 40 159 63 166 1.19e-12 63.9
MS.gene45483.t1 MTR_8g076490 30.833 120 67 3 1 119 12 116 5.36e-12 61.6
MS.gene45483.t1 MTR_5g021260 32.143 112 60 3 9 119 20 116 3.23e-11 59.7
MS.gene45483.t1 MTR_4g121960 28.289 152 73 6 1 144 7 130 5.91e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene45483.t1 AT5G59300 92.908 141 10 0 1 141 1 141 1.06e-87 255
MS.gene45483.t1 AT3G46460 92.908 141 10 0 1 141 1 141 1.67e-86 253
MS.gene45483.t1 AT3G55380 89.209 139 15 0 3 141 4 142 6.14e-82 241
MS.gene45483.t1 AT3G55380 70.520 173 17 1 3 141 4 176 6.55e-74 222
MS.gene45483.t1 AT3G46460 92.391 92 7 0 50 141 8 99 1.96e-59 182
MS.gene45483.t1 AT3G46460 92.391 92 7 0 50 141 8 99 1.96e-59 182
MS.gene45483.t1 AT2G02760 39.007 141 72 2 1 141 1 127 3.07e-29 106
MS.gene45483.t1 AT2G02760 39.007 141 72 2 1 141 1 127 3.07e-29 106
MS.gene45483.t1 AT2G02760 39.007 141 72 2 1 141 1 127 3.07e-29 106
MS.gene45483.t1 AT2G02760 39.007 141 72 2 1 141 1 127 3.07e-29 106
MS.gene45483.t1 AT1G14400 39.007 141 72 2 1 141 1 127 3.17e-29 106
MS.gene45483.t1 AT1G14400 39.007 141 72 2 1 141 1 127 3.17e-29 106
MS.gene45483.t1 AT5G62540 39.007 141 72 2 1 141 1 127 2.17e-28 104
MS.gene45483.t1 AT3G08700 37.956 137 72 1 5 141 2 125 5.11e-28 103
MS.gene45483.t1 AT3G08700 37.956 137 72 1 5 141 2 125 5.11e-28 103
MS.gene45483.t1 AT3G08690 39.416 137 69 2 5 141 2 124 1.99e-27 102
MS.gene45483.t1 AT3G08690 39.416 137 69 2 5 141 2 124 1.99e-27 102
MS.gene45483.t1 AT1G64230 39.855 138 69 2 4 141 1 124 4.85e-27 100
MS.gene45483.t1 AT1G64230 39.855 138 69 2 4 141 1 124 4.85e-27 100
MS.gene45483.t1 AT4G27960 39.130 138 70 2 4 141 1 124 7.62e-27 100
MS.gene45483.t1 AT5G41700 38.406 138 71 2 4 141 1 124 2.85e-26 99.0
MS.gene45483.t1 AT5G41700 38.406 138 71 2 4 141 1 124 2.85e-26 99.0
MS.gene45483.t1 AT5G41700 38.406 138 71 2 4 141 1 124 2.85e-26 99.0
MS.gene45483.t1 AT5G53300 38.686 137 70 2 5 141 2 124 3.94e-26 98.6
MS.gene45483.t1 AT5G53300 38.686 137 70 2 5 141 2 124 3.94e-26 98.6
MS.gene45483.t1 AT5G53300 38.686 137 70 2 5 141 2 124 3.94e-26 98.6
MS.gene45483.t1 AT4G27960 38.298 141 73 2 1 141 28 154 5.43e-26 99.0
MS.gene45483.t1 AT5G56150 36.496 137 73 2 5 141 2 124 3.91e-25 95.9
MS.gene45483.t1 AT5G41700 37.410 139 72 3 4 141 1 125 3.45e-24 93.6
MS.gene45483.t1 AT1G64230 35.616 146 73 2 4 141 1 133 1.03e-23 92.4
MS.gene45483.t1 AT5G25760 35.461 141 74 4 2 140 3 128 1.21e-22 89.7
MS.gene45483.t1 AT5G25760 35.461 141 74 4 2 140 3 128 1.21e-22 89.7
MS.gene45483.t1 AT2G16740 34.783 138 76 2 4 141 1 124 1.30e-22 89.4
MS.gene45483.t1 AT1G64230 37.615 109 55 1 33 141 71 166 1.86e-21 87.8
MS.gene45483.t1 AT1G64230 37.615 109 55 1 33 141 71 166 1.86e-21 87.8
MS.gene45483.t1 AT5G41700 37.288 118 60 2 4 121 1 104 9.63e-21 84.7
MS.gene45483.t1 AT1G50490 39.286 112 55 1 30 141 60 158 2.92e-20 84.3
MS.gene45483.t1 AT1G16890 33.600 125 69 2 11 135 12 122 3.82e-20 83.2
MS.gene45483.t1 AT5G53300 37.069 116 59 2 4 119 1 102 5.20e-20 81.6
MS.gene45483.t1 AT1G78870 33.600 125 69 2 11 135 12 122 5.30e-20 82.8
MS.gene45483.t1 AT5G56150 34.188 117 63 2 4 120 1 103 1.65e-19 80.5
MS.gene45483.t1 AT3G20060 36.842 133 70 2 9 141 41 159 1.93e-19 82.0
MS.gene45483.t1 AT3G57870 36.029 136 72 2 9 140 10 134 2.48e-19 81.3
MS.gene45483.t1 AT3G20060 37.500 112 57 1 30 141 16 114 5.11e-19 79.7
MS.gene45483.t1 AT1G36340 39.286 112 54 2 24 135 27 124 7.59e-19 79.7
MS.gene45483.t1 AT1G36340 39.286 112 54 2 24 135 27 124 7.59e-19 79.7
MS.gene45483.t1 AT1G16890 34.483 116 62 2 20 135 30 131 3.88e-18 78.2
MS.gene45483.t1 AT1G78870 34.343 99 52 1 37 135 4 89 1.79e-17 75.5
MS.gene45483.t1 AT1G16890 34.343 99 52 1 37 135 4 89 1.81e-17 75.1
MS.gene45483.t1 AT3G24515 34.783 138 73 3 2 131 4 132 6.56e-17 78.6
MS.gene45483.t1 AT1G78870 31.304 115 65 2 11 125 12 112 3.81e-16 71.6
MS.gene45483.t1 AT1G78870 34.000 100 52 2 37 135 4 90 1.01e-15 70.9
MS.gene45483.t1 AT5G50870 31.387 137 74 5 9 141 7 127 1.14e-15 72.4
MS.gene45483.t1 AT5G50870 31.387 137 74 5 9 141 7 127 1.32e-15 72.4
MS.gene45483.t1 AT3G13550 33.594 128 71 2 9 136 41 154 2.02e-15 71.6
MS.gene45483.t1 AT3G24515 36.364 99 54 2 33 131 68 157 2.15e-14 71.2
MS.gene45483.t1 AT3G13550 32.520 123 69 2 9 131 41 149 3.90e-14 67.8
MS.gene45483.t1 AT2G18600 27.397 146 83 4 31 176 57 179 1.45e-13 66.6
MS.gene45483.t1 AT2G18600 27.397 146 83 4 31 176 57 179 1.45e-13 66.6
MS.gene45483.t1 AT4G36800 29.231 130 73 3 30 159 57 167 1.79e-12 63.5
MS.gene45483.t1 AT4G36800 29.231 130 73 3 30 159 57 167 1.79e-12 63.5
MS.gene45483.t1 AT1G45050 31.250 112 61 3 9 119 20 116 4.30e-12 62.0
MS.gene45483.t1 AT5G05080 28.788 132 80 2 9 140 15 132 4.59e-12 63.5
MS.gene45483.t1 AT5G05080 28.788 132 80 2 9 140 15 132 4.59e-12 63.5
MS.gene45483.t1 AT5G05080 28.788 132 80 2 9 140 15 132 4.59e-12 63.5
MS.gene45483.t1 AT5G05080 28.788 132 80 2 9 140 15 132 4.59e-12 63.5
MS.gene45483.t1 AT1G75440 30.833 120 67 3 1 119 12 116 5.73e-12 61.6
MS.gene45483.t1 AT1G63800 25.490 153 95 5 10 160 6 141 6.28e-12 62.0
MS.gene45483.t1 AT5G42990 31.250 112 61 3 9 119 20 116 9.58e-12 61.2
MS.gene45483.t1 AT3G17000 30.769 130 60 6 11 131 18 126 3.24e-11 61.6
MS.gene45483.t1 AT1G63800 28.346 127 73 4 36 160 16 126 4.66e-11 59.3
MS.gene45483.t1 AT2G46030 29.630 135 77 5 10 141 6 125 5.46e-11 59.7
MS.gene45483.t1 AT2G46030 29.630 135 77 5 10 141 6 125 5.46e-11 59.7
MS.gene45483.t1 AT1G17280 29.851 134 74 5 1 127 1 121 6.37e-11 60.1
MS.gene45483.t1 AT2G46030 29.630 135 77 5 10 141 78 197 7.30e-11 60.1

Find 58 sgRNAs with CRISPR-Local

Find 253 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATGGAGTGTAACCATAAT+TGG 0.137403 2.1:+6939972 MS.gene45483:CDS
AGTATCATATCGATGCTTTC+TGG 0.256685 2.1:+6942461 MS.gene45483:CDS
CCCCTTCCTGCCACAAGTTC+AGG 0.272959 2.1:+6943163 MS.gene45483:CDS
GAGAGACGATTTCAAGAAAA+AGG 0.291595 2.1:+6943897 MS.gene45483:CDS
TGTATCTGGTGGCCCAATTA+TGG 0.313031 2.1:-6939985 None:intergenic
TTCACTGATGGTGGACTGTT+TGG 0.316044 2.1:-6941220 None:intergenic
AGAACTTACTAAAGTGTATC+TGG 0.332749 2.1:-6939999 None:intergenic
CTTGCAAGCTCATAACCATT+TGG 0.354028 2.1:-6941567 None:intergenic
TTTGCCGGAGATTCATCATT+AGG 0.355777 2.1:-6942485 None:intergenic
ACTGCAGCTTCAACATTTGC+CGG 0.368423 2.1:-6942500 None:intergenic
TTTGAAGGAGGAGGCTTGCT+TGG 0.372918 2.1:-6939786 None:intergenic
ATATCTATTCTTCATCCTCC+TGG 0.379234 2.1:+6941537 MS.gene45483:CDS
TTGAAGGAGGAGGCTTGCTT+GGG 0.393797 2.1:-6939785 None:intergenic
TGCAGAAGGAGTGGAGAGAC+AGG 0.411818 2.1:+6943875 MS.gene45483:intron
TGAAGTTCACTTCAGAGATA+TGG 0.412336 2.1:+6941239 MS.gene45483:CDS
TTGCAAGCTCATAACCATTT+GGG 0.423493 2.1:-6941566 None:intergenic
GGCAATGGGGCAGGTAGGGA+CGG 0.436406 2.1:+6943094 MS.gene45483:intron
GATATGCAAACCCGCCCATC+AGG 0.446681 2.1:-6941519 None:intergenic
TATCTATTCTTCATCCTCCT+GGG 0.449275 2.1:+6941538 MS.gene45483:CDS
CCCTGAACTTGTGGCAGGAA+GGG 0.449911 2.1:-6943164 None:intergenic
AATGGAGTGTAACCATAATT+GGG 0.465426 2.1:+6939973 MS.gene45483:CDS
GCAATGGGGCAGGTAGGGAC+GGG 0.482705 2.1:+6943095 MS.gene45483:intron
CCCTTCCTGCCACAAGTTCA+GGG 0.482885 2.1:+6943164 MS.gene45483:CDS
CCCCTGAACTTGTGGCAGGA+AGG 0.494451 2.1:-6943165 None:intergenic
AAGGAGGAGGCTTGCTTGGG+AGG 0.498537 2.1:-6939782 None:intergenic
CCTGAACTTGTGGCAGGAAG+GGG 0.503665 2.1:-6943163 None:intergenic
TTCACCCCTGAACTTGTGGC+AGG 0.511799 2.1:-6943169 None:intergenic
GTATTTGCAGTATATCCTGA+TGG 0.513643 2.1:+6941504 MS.gene45483:intron
TGGTCCTAATGATGAATCTC+CGG 0.517026 2.1:+6942481 MS.gene45483:CDS
CCTCCTGGGGATGACCCAAA+TGG 0.528218 2.1:+6941552 MS.gene45483:CDS
TAACCATTTGGGTCATCCCC+AGG 0.531119 2.1:-6941555 None:intergenic
ATGAGCTTGCAAGTGAGCGC+TGG 0.535537 2.1:+6941577 MS.gene45483:CDS
TGCAGTATATCCTGATGGGC+GGG 0.538018 2.1:+6941509 MS.gene45483:intron
AATAGCAAGAAACGAGGGGC+CGG 0.538604 2.1:-6943965 None:intergenic
TATTTGCAGTATATCCTGAT+GGG 0.549933 2.1:+6941505 MS.gene45483:intron
TCAATTTCTTGTAGTGAAGG+AGG 0.560751 2.1:+6941160 MS.gene45483:intron
CCAGCGGAAAAGCCATCGAC+GGG 0.566293 2.1:-6939924 None:intergenic
GAAATGTTGTGATTCACAGC+CGG 0.566809 2.1:+6943946 MS.gene45483:CDS
TTGCAGTATATCCTGATGGG+CGG 0.572889 2.1:+6941508 MS.gene45483:intron
TGTTTATATTGCAGAAGGAG+TGG 0.573707 2.1:+6943866 MS.gene45483:intron
CTTTGTAAACATCCCGTCGA+TGG 0.573847 2.1:+6939912 MS.gene45483:CDS
ATCTATTCTTCATCCTCCTG+GGG 0.574309 2.1:+6941539 MS.gene45483:CDS
CCGATGTGTGCGGAAGTCAC+AGG 0.588338 2.1:+6943924 MS.gene45483:CDS
GAAGTGAACTTCACTGATGG+TGG 0.596810 2.1:-6941229 None:intergenic
ACCAGCGGAAAAGCCATCGA+CGG 0.610363 2.1:-6939925 None:intergenic
GGACTGTTTGGATAGTTCGA+CGG 0.629490 2.1:-6941208 None:intergenic
GTTCGACGGAAAGCTCATGA+TGG 0.632587 2.1:-6941194 None:intergenic
TTCACAATAGCAAGAAACGA+GGG 0.635127 2.1:-6943970 None:intergenic
TCAGAGATATGGCATCCCAA+TGG 0.645768 2.1:+6941250 MS.gene45483:CDS
CCTTCCTGCCACAAGTTCAG+GGG 0.651507 2.1:+6943165 MS.gene45483:CDS
CCTGTGACTTCCGCACACAT+CGG 0.655883 2.1:-6943924 None:intergenic
TCTGAAGTGAACTTCACTGA+TGG 0.656247 2.1:-6941232 None:intergenic
AAAAGGTTAGCCGATGTGTG+CGG 0.675247 2.1:+6943914 MS.gene45483:CDS
CTTCACAATAGCAAGAAACG+AGG 0.678923 2.1:-6943971 None:intergenic
ACTTACTAAAGTGTATCTGG+TGG 0.687155 2.1:-6939996 None:intergenic
GGTTTCGTCGACTAAACCAG+CGG 0.711029 2.1:-6939940 None:intergenic
CCATTTGGGTCATCCCCAGG+AGG 0.711844 2.1:-6941552 None:intergenic
TCACAATAGCAAGAAACGAG+GGG 0.727949 2.1:-6943969 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATAAGTTAAAAAGAAAT+TGG + chr2.1:6942047-6942066 MS.gene45483:intron 10.0%
!! AAATAAACGAATTGAATTTA+TGG - chr2.1:6941636-6941655 None:intergenic 15.0%
!! AAATATCATAATCAATAAAC+CGG - chr2.1:6940722-6940741 None:intergenic 15.0%
!! AATCATGTAAATAAGAAAAA+AGG - chr2.1:6942534-6942553 None:intergenic 15.0%
!! ATAAAAAAGAATACAGATTA+TGG + chr2.1:6940315-6940334 MS.gene45483:intron 15.0%
!! ATTAAATCGTTATGTTAAAA+AGG - chr2.1:6942226-6942245 None:intergenic 15.0%
!! CTTATAAAATGATCATTTAT+TGG + chr2.1:6940095-6940114 MS.gene45483:intron 15.0%
!! TAATATCAATATAGTAGTTT+AGG + chr2.1:6942969-6942988 MS.gene45483:intron 15.0%
!! TTGATTATGATATTTATTCT+AGG + chr2.1:6940727-6940746 MS.gene45483:intron 15.0%
!!! ATTTTAAAAAAATTGGTCAT+CGG - chr2.1:6942028-6942047 None:intergenic 15.0%
!!! GTTTTACTAATAATATGTTA+TGG + chr2.1:6942656-6942675 MS.gene45483:intron 15.0%
!!! TTTAATTTATACTTATTGGT+GGG + chr2.1:6940164-6940183 MS.gene45483:intron 15.0%
!!! TTTTAATTTATACTTATTGG+TGG + chr2.1:6940163-6940182 MS.gene45483:intron 15.0%
!! AAAACTTATACCAGTTTATA+AGG + chr2.1:6940629-6940648 MS.gene45483:intron 20.0%
!! AATATCATAATCAATAAACC+GGG - chr2.1:6940721-6940740 None:intergenic 20.0%
!! ACAATTATCTAGATCAATAT+CGG - chr2.1:6942625-6942644 None:intergenic 20.0%
!! ATTAATTTACTTCCTATGAT+TGG + chr2.1:6940840-6940859 MS.gene45483:intron 20.0%
!! GAGATATCTACATAAATAAT+TGG - chr2.1:6942746-6942765 None:intergenic 20.0%
!! TATTGTAAAACAAGAACAAA+AGG - chr2.1:6940807-6940826 None:intergenic 20.0%
!! TTAAGAAAGCTATAAAAAAC+AGG - chr2.1:6943488-6943507 None:intergenic 20.0%
!! TTATTCATAAGCAAATAAAC+AGG - chr2.1:6942400-6942419 None:intergenic 20.0%
!!! AGTGTTTTACTAGTAAATAA+AGG - chr2.1:6942690-6942709 None:intergenic 20.0%
!!! ATAAGTTTTTTGAGACTATT+CGG - chr2.1:6940618-6940637 None:intergenic 20.0%
!!! TGGTTTTAATATTTTCTTGT+GGG - chr2.1:6943209-6943228 None:intergenic 20.0%
!!! TTTATTCTAGGTTTTTTTGT+TGG + chr2.1:6940739-6940758 MS.gene45483:intron 20.0%
!!! TTTTATTTGACCTTATAAAC+TGG - chr2.1:6940642-6940661 None:intergenic 20.0%
! AAAAACAGGCAAAAGATATT+AGG - chr2.1:6943474-6943493 None:intergenic 25.0%
! ATAATTAGTAGATACGAAAG+TGG + chr2.1:6942884-6942903 MS.gene45483:intron 25.0%
! ATGTGTAGTATTAGGAATTT+AGG + chr2.1:6943596-6943615 MS.gene45483:intron 25.0%
! ATTAATTTACTTCATCCGAT+TGG + chr2.1:6941028-6941047 MS.gene45483:intron 25.0%
! CATTATTCAATTGATATTGC+TGG + chr2.1:6941678-6941697 MS.gene45483:intron 25.0%
! CTAATAATATGTTATGGACT+TGG + chr2.1:6942662-6942681 MS.gene45483:intron 25.0%
! CTACTAGTAGTTATTATCAA+CGG + chr2.1:6943432-6943451 MS.gene45483:intron 25.0%
! GACATTTCTTTGATTAAAAC+AGG + chr2.1:6941458-6941477 MS.gene45483:intron 25.0%
! GATGAAGTAAATTAATGATG+AGG - chr2.1:6941024-6941043 None:intergenic 25.0%
! GTAAAAGAAGTGATATTTGA+AGG + chr2.1:6940288-6940307 MS.gene45483:intron 25.0%
! TAACACTTAAATTAGCTGTA+AGG - chr2.1:6942250-6942269 None:intergenic 25.0%
! TAAGTATAAAAAGAGAAGTG+TGG - chr2.1:6942575-6942594 None:intergenic 25.0%
! TAATTAGTAGATACGAAAGT+GGG + chr2.1:6942885-6942904 MS.gene45483:intron 25.0%
! TAGATGCAAAATACTTGTAA+AGG + chr2.1:6941815-6941834 MS.gene45483:intron 25.0%
! TAGGAAGTAAATTAATGATG+AGG - chr2.1:6940836-6940855 None:intergenic 25.0%
! TGTAAGCTTACATAAGTTAT+AGG + chr2.1:6940464-6940483 MS.gene45483:intron 25.0%
! TGTTGTTCCTTAAAAAACAT+AGG - chr2.1:6941365-6941384 None:intergenic 25.0%
!! ATTGATGATATTGTTTCATG+AGG + chr2.1:6940248-6940267 MS.gene45483:intron 25.0%
!! ATTTATTGGATTTTCTGTGA+TGG + chr2.1:6940109-6940128 MS.gene45483:intron 25.0%
!! TTTATTGGATTTTCTGTGAT+GGG + chr2.1:6940110-6940129 MS.gene45483:intron 25.0%
!!! GTAACATCCTATGTTTTTTA+AGG + chr2.1:6941355-6941374 MS.gene45483:intron 25.0%
!!! GTGGTTTTAATATTTTCTTG+TGG - chr2.1:6943210-6943229 None:intergenic 25.0%
!!! TAAGTTTTTTGAGACTATTC+GGG - chr2.1:6940617-6940636 None:intergenic 25.0%
!!! TGATACGTTGATAATAACTA+CGG + chr2.1:6942798-6942817 MS.gene45483:intron 25.0%
AAACAAATAAGCTGAGTAGT+TGG - chr2.1:6940942-6940961 None:intergenic 30.0%
AAGATCTGTGAGAAAAAGTA+AGG - chr2.1:6939895-6939914 None:intergenic 30.0%
AATGGAGTGTAACCATAATT+GGG + chr2.1:6939973-6939992 MS.gene45483:CDS 30.0%
AATTCCAAAACCAATCCAAT+CGG - chr2.1:6941046-6941065 None:intergenic 30.0%
AGAACTTACTAAAGTGTATC+TGG - chr2.1:6940002-6940021 None:intergenic 30.0%
ATAACTTTACTGAATGTCCT+TGG + chr2.1:6942305-6942324 MS.gene45483:intron 30.0%
ATAAGCGATGCAATGAAAAA+AGG - chr2.1:6939835-6939854 None:intergenic 30.0%
ATAAGTTGTTTATCCGAACA+GGG - chr2.1:6940341-6940360 None:intergenic 30.0%
CTTATATTCATAACTTCTCC+AGG - chr2.1:6940547-6940566 None:intergenic 30.0%
CTTTCAATTTCTTGTAGTGA+AGG + chr2.1:6941157-6941176 MS.gene45483:intron 30.0%
GAGCATGCTTGTATTTAATA+GGG + chr2.1:6941756-6941775 MS.gene45483:intron 30.0%
GTAAGGTTAATCAGAAATAG+CGG - chr2.1:6939878-6939897 None:intergenic 30.0%
GTGATCATAACAAAAGTTGT+GGG + chr2.1:6941908-6941927 MS.gene45483:intron 30.0%
GTGTTAAACTAGTAACTACT+AGG + chr2.1:6943363-6943382 MS.gene45483:intron 30.0%
TAACTTTACTGAATGTCCTT+GGG + chr2.1:6942306-6942325 MS.gene45483:intron 30.0%
TAAGCGATGCAATGAAAAAA+GGG - chr2.1:6939834-6939853 None:intergenic 30.0%
TACACTCCATTCAAAAATGT+TGG - chr2.1:6939964-6939983 None:intergenic 30.0%
TAGTTTAGGCATTACTCTTT+AGG + chr2.1:6942983-6943002 MS.gene45483:intron 30.0%
TATAAGTTGTTTATCCGAAC+AGG - chr2.1:6940342-6940361 None:intergenic 30.0%
TATTTGCAGTATATCCTGAT+GGG + chr2.1:6941505-6941524 MS.gene45483:intron 30.0%
TGATCTAGATAATTGTGCAA+AGG + chr2.1:6942629-6942648 MS.gene45483:intron 30.0%
TGCAAATTATTATGCTTTCC+CGG + chr2.1:6940700-6940719 MS.gene45483:intron 30.0%
TGCTATACACTGTATCAATT+AGG - chr2.1:6943790-6943809 None:intergenic 30.0%
TGTGATGTTTATATTGCAGA+AGG + chr2.1:6943861-6943880 MS.gene45483:intron 30.0%
TTAAACAACAAGTCTATAGC+AGG - chr2.1:6942192-6942211 None:intergenic 30.0%
TTGGTTTCATTTATTTGCAC+TGG + chr2.1:6940758-6940777 MS.gene45483:intron 30.0%
TTTACTTCCTATGATTGGAT+TGG + chr2.1:6940845-6940864 MS.gene45483:intron 30.0%
! ACGAAACCAACATTTTTGAA+TGG + chr2.1:6939955-6939974 MS.gene45483:CDS 30.0%
! ATTCAAAGTATTCAAGACGT+GGG - chr2.1:6943249-6943268 None:intergenic 30.0%
! CTACAAGAAATTGAAAGCAT+TGG - chr2.1:6941154-6941173 None:intergenic 30.0%
! TATTCAAAGTATTCAAGACG+TGG - chr2.1:6943250-6943269 None:intergenic 30.0%
! TTATTGGATTTTCTGTGATG+GGG + chr2.1:6940111-6940130 MS.gene45483:intron 30.0%
!! AAAGTTTTGATAAGCTATCC+TGG + chr2.1:6940526-6940545 MS.gene45483:intron 30.0%
!! AGATACTCTAAAATGAGTGA+TGG - chr2.1:6942123-6942142 None:intergenic 30.0%
!! GACAGTTTGGAATATTGTTT+TGG + chr2.1:6943820-6943839 MS.gene45483:intron 30.0%
!! TTTTCAGAGTTTGGTTCAAT+TGG + chr2.1:6940187-6940206 MS.gene45483:intron 30.0%
!!! ATCACTCATTTTAGAGTATC+TGG + chr2.1:6942122-6942141 MS.gene45483:intron 30.0%
!!! CTCTGTTTTAAGATTCCTTT+CGG + chr2.1:6943535-6943554 MS.gene45483:intron 30.0%
!!! GTTGAACAAACAGCTTTTTT+CGG - chr2.1:6943661-6943680 None:intergenic 30.0%
!!! TATGAGAATGCTTTTTCTCT+TGG + chr2.1:6943056-6943075 MS.gene45483:intron 30.0%
ACAACACTAATGGTGACAAT+TGG - chr2.1:6943625-6943644 None:intergenic 35.0%
ACCATTAGTGTTGTCAATTG+TGG + chr2.1:6943631-6943650 MS.gene45483:intron 35.0%
ACTTACTAAAGTGTATCTGG+TGG - chr2.1:6939999-6940018 None:intergenic 35.0%
AGTATCATATCGATGCTTTC+TGG + chr2.1:6942461-6942480 MS.gene45483:CDS 35.0%
ATAGGATGTTACTGCAATAC+GGG - chr2.1:6941347-6941366 None:intergenic 35.0%
ATATCTATTCTTCATCCTCC+TGG + chr2.1:6941537-6941556 MS.gene45483:CDS 35.0%
ATGTCCATACTGATAATACG+TGG + chr2.1:6943387-6943406 MS.gene45483:intron 35.0%
CAACACTAATGGTGACAATT+GGG - chr2.1:6943624-6943643 None:intergenic 35.0%
CAAGTATGTCAAAACACTCA+TGG - chr2.1:6942356-6942375 None:intergenic 35.0%
CATAGGATGTTACTGCAATA+CGG - chr2.1:6941348-6941367 None:intergenic 35.0%
CATTCCACGTATTATCAGTA+TGG - chr2.1:6943394-6943413 None:intergenic 35.0%
CGAAAGGAATCTTAAAACAG+AGG - chr2.1:6943537-6943556 None:intergenic 35.0%
CGAGCATGCTTGTATTTAAT+AGG + chr2.1:6941755-6941774 MS.gene45483:intron 35.0%
CGTGATCATAACAAAAGTTG+TGG + chr2.1:6941907-6941926 MS.gene45483:intron 35.0%
CTAGTAAAACACTATGTCCT+TGG + chr2.1:6942697-6942716 MS.gene45483:intron 35.0%
CTATAGCAGGTAAACATTAC+AGG - chr2.1:6942179-6942198 None:intergenic 35.0%
CTGCAATATAAACATCACAC+AGG - chr2.1:6943860-6943879 None:intergenic 35.0%
GAATGGAGTGTAACCATAAT+TGG + chr2.1:6939972-6939991 MS.gene45483:CDS 35.0%
GAGAGACGATTTCAAGAAAA+AGG + chr2.1:6943897-6943916 MS.gene45483:CDS 35.0%
GTATTTGCAGTATATCCTGA+TGG + chr2.1:6941504-6941523 MS.gene45483:intron 35.0%
TATCTATTCTTCATCCTCCT+GGG + chr2.1:6941538-6941557 MS.gene45483:CDS 35.0%
TCAATTTCTTGTAGTGAAGG+AGG + chr2.1:6941160-6941179 MS.gene45483:intron 35.0%
TCCAAAACCAATCCAATCAT+AGG - chr2.1:6940855-6940874 None:intergenic 35.0%
TCCACAATTGACAACACTAA+TGG - chr2.1:6943635-6943654 None:intergenic 35.0%
TCGCTCATAAAACTCAAACT+TGG - chr2.1:6942927-6942946 None:intergenic 35.0%
TGAAGTTCACTTCAGAGATA+TGG + chr2.1:6941239-6941258 MS.gene45483:CDS 35.0%
TGAGAAAATCCAATGATGCA+CGG - chr2.1:6941433-6941452 None:intergenic 35.0%
TGTAGCATTAAAGCAATCCA+AGG - chr2.1:6942717-6942736 None:intergenic 35.0%
TGTTTATATTGCAGAAGGAG+TGG + chr2.1:6943866-6943885 MS.gene45483:intron 35.0%
TTATGTTAAAAAGGCAAGCC+AGG - chr2.1:6942217-6942236 None:intergenic 35.0%
TTGCAAGCTCATAACCATTT+GGG - chr2.1:6941569-6941588 None:intergenic 35.0%
TTTACTTCATCCGATTGGAT+TGG + chr2.1:6941033-6941052 MS.gene45483:intron 35.0%
! ACTGGATTTTCATTAGCTGT+AGG + chr2.1:6940776-6940795 MS.gene45483:intron 35.0%
! ATTTTCTTGTGGGACTAAGT+TGG - chr2.1:6943199-6943218 None:intergenic 35.0%
! TATTGGATTTTCTGTGATGG+GGG + chr2.1:6940112-6940131 MS.gene45483:intron 35.0%
! TTTTCACGTACTGTATGAAC+AGG - chr2.1:6941606-6941625 None:intergenic 35.0%
! TTTTCTTGTGGGACTAAGTT+GGG - chr2.1:6943198-6943217 None:intergenic 35.0%
!! ACTCTAAAATGAGTGATGGT+CGG - chr2.1:6942119-6942138 None:intergenic 35.0%
!! TAGACTTGTTGTTTAAGACC+TGG + chr2.1:6942196-6942215 MS.gene45483:intron 35.0%
!!! AATGTGTACTTTTAGGACAG+AGG - chr2.1:6943753-6943772 None:intergenic 35.0%
!!! GTGTCGAGTGTTTTTTTGAA+GGG - chr2.1:6943144-6943163 None:intergenic 35.0%
!!! TACCTTTGAGCTGTTTTTGA+AGG - chr2.1:6939804-6939823 None:intergenic 35.0%
!!! TCCTATGATTGGATTGGTTT+TGG + chr2.1:6940851-6940870 MS.gene45483:intron 35.0%
!!! TGTGTCATTTTGAGTACTGA+AGG + chr2.1:6943688-6943707 MS.gene45483:intron 35.0%
AAATTGGTCATCGGATACGT+TGG - chr2.1:6942019-6942038 None:intergenic 40.0%
AAGTATTCAAGACGTGGGTT+AGG - chr2.1:6943244-6943263 None:intergenic 40.0%
ACAAGCAAATCCTACAGCTA+AGG - chr2.1:6940977-6940996 None:intergenic 40.0%
ATACAGATTATGGCCCTGTT+CGG + chr2.1:6940325-6940344 MS.gene45483:intron 40.0%
ATCTATTCTTCATCCTCCTG+GGG + chr2.1:6941539-6941558 MS.gene45483:CDS 40.0%
CAGAGAGAAAACCAACCATT+GGG - chr2.1:6941268-6941287 None:intergenic 40.0%
CTCAGCTTATTTGTTTGCAC+TGG + chr2.1:6940946-6940965 MS.gene45483:intron 40.0%
CTCCTTCAAAAACAGCTCAA+AGG + chr2.1:6939799-6939818 MS.gene45483:CDS 40.0%
CTTGCAAGCTCATAACCATT+TGG - chr2.1:6941570-6941589 None:intergenic 40.0%
GAAATGTTGTGATTCACAGC+CGG + chr2.1:6943946-6943965 MS.gene45483:CDS 40.0%
GCACTTCAATCTTGACAGTT+TGG + chr2.1:6943807-6943826 MS.gene45483:intron 40.0%
GTATGTCAAAACACTCATGG+TGG - chr2.1:6942353-6942372 None:intergenic 40.0%
GTGGAATGTCTTGTATGCAA+AGG + chr2.1:6943406-6943425 MS.gene45483:intron 40.0%
TACTGAATGTCCTTGGGATA+TGG + chr2.1:6942312-6942331 MS.gene45483:intron 40.0%
TCACAATAGCAAGAAACGAG+GGG - chr2.1:6943972-6943991 None:intergenic 40.0%
TCAGAGAGAAAACCAACCAT+TGG - chr2.1:6941269-6941288 None:intergenic 40.0%
TCTATTGAGATCCCTACACT+TGG + chr2.1:6943567-6943586 MS.gene45483:intron 40.0%
TGATACTCCTAGGATACTCT+TGG - chr2.1:6942092-6942111 None:intergenic 40.0%
TGGCAAACAAATAAGCTGAG+TGG - chr2.1:6941134-6941153 None:intergenic 40.0%
TGGTCCTAATGATGAATCTC+CGG + chr2.1:6942481-6942500 MS.gene45483:CDS 40.0%
TGTTACTGCAATACGGGTAT+CGG - chr2.1:6941341-6941360 None:intergenic 40.0%
TTTGCCGGAGATTCATCATT+AGG - chr2.1:6942488-6942507 None:intergenic 40.0%
TTTGCGTCCTAGAGAAGTAA+AGG + chr2.1:6942595-6942614 MS.gene45483:intron 40.0%
! AAAGAGAAGTGTGGTGAAGA+TGG - chr2.1:6942566-6942585 None:intergenic 40.0%
! ACTGGATTTTCCTTAGCTGT+AGG + chr2.1:6940964-6940983 MS.gene45483:intron 40.0%
! AGTATTCAAGACGTGGGTTA+GGG - chr2.1:6943243-6943262 None:intergenic 40.0%
! CAGAGTTTGGTTCAATTGGT+TGG + chr2.1:6940191-6940210 MS.gene45483:intron 40.0%
! TCTGAAGTGAACTTCACTGA+TGG - chr2.1:6941235-6941254 None:intergenic 40.0%
!! ATTTTCTGTGATGGGGGTTT+TGG + chr2.1:6940118-6940137 MS.gene45483:intron 40.0%
!! GGGCTTTTCTTTGTTTACGA+GGG + chr2.1:6941928-6941947 MS.gene45483:intron 40.0%
!! TATGCATCCAAGAGTATCCT+AGG + chr2.1:6942082-6942101 MS.gene45483:intron 40.0%
!! TGGGCTTTTCTTTGTTTACG+AGG + chr2.1:6941927-6941946 MS.gene45483:intron 40.0%
!!! ATTGGTGGGTTTTCAGAGTT+TGG + chr2.1:6940178-6940197 MS.gene45483:intron 40.0%
!!! CGAGTGTTTTTTTGAAGGGT+GGG - chr2.1:6943140-6943159 None:intergenic 40.0%
!!! CTTTGAGCTGTTTTTGAAGG+AGG - chr2.1:6939801-6939820 None:intergenic 40.0%
!!! GGTGTCGAGTGTTTTTTTGA+AGG - chr2.1:6943145-6943164 None:intergenic 40.0%
!!! TCATCCGATTGGATTGGTTT+TGG + chr2.1:6941039-6941058 MS.gene45483:intron 40.0%
!!! TCGAGTGTTTTTTTGAAGGG+TGG - chr2.1:6943141-6943160 None:intergenic 40.0%
!!! TGCTTTTTCTCTTGGCATGT+TGG + chr2.1:6943064-6943083 MS.gene45483:intron 40.0%
!!! TGTTTTTTTGAAGGGTGGGA+GGG - chr2.1:6943136-6943155 None:intergenic 40.0%
!!! TTTTAAGATTCCTTTCGGCC+AGG + chr2.1:6943540-6943559 MS.gene45483:intron 40.0%
AAGTGGCATACCATATCCCA+AGG - chr2.1:6942325-6942344 None:intergenic 45.0%
ACTGCAGCTTCAACATTTGC+CGG - chr2.1:6942503-6942522 None:intergenic 45.0%
AGATATGGCATCCCAATGGT+TGG + chr2.1:6941254-6941273 MS.gene45483:intron 45.0%
CATCCGATGCAAAACGTATC+GGG - chr2.1:6941398-6941417 None:intergenic 45.0%
CGCTAGAGTAGAAGCTTTCT+CGG + chr2.1:6942146-6942165 MS.gene45483:intron 45.0%
CGGTTTGCCTTTACTTCTCT+AGG - chr2.1:6942605-6942624 None:intergenic 45.0%
CTTTGTAAACATCCCGTCGA+TGG + chr2.1:6939912-6939931 MS.gene45483:CDS 45.0%
GAAGTGAACTTCACTGATGG+TGG - chr2.1:6941232-6941251 None:intergenic 45.0%
GATACGTTGGAGATGCATCA+CGG - chr2.1:6942006-6942025 None:intergenic 45.0%
GCATCCGATGCAAAACGTAT+CGG - chr2.1:6941399-6941418 None:intergenic 45.0%
GCTAGAGTAGAAGCTTTCTC+GGG + chr2.1:6942147-6942166 MS.gene45483:intron 45.0%
GCTGAGTAGTTGGTCAAACT+CGG - chr2.1:6940932-6940951 None:intergenic 45.0%
GGACTGTTTGGATAGTTCGA+CGG - chr2.1:6941211-6941230 None:intergenic 45.0%
GGCAAGGGATGTGTAGTATT+AGG + chr2.1:6943588-6943607 MS.gene45483:intron 45.0%
TCAGAGATATGGCATCCCAA+TGG + chr2.1:6941250-6941269 MS.gene45483:CDS 45.0%
TGTATCTGGTGGCCCAATTA+TGG - chr2.1:6939988-6940007 None:intergenic 45.0%
TTGCAGTATATCCTGATGGG+CGG + chr2.1:6941508-6941527 MS.gene45483:intron 45.0%
! AAAAGGTTAGCCGATGTGTG+CGG + chr2.1:6943914-6943933 MS.gene45483:CDS 45.0%
! CTGAGTGGTTAGTCAAACTC+TGG - chr2.1:6941119-6941138 None:intergenic 45.0%
! GATTTTCACCCCTGAACTTG+TGG - chr2.1:6943176-6943195 None:intergenic 45.0%
! GTAACTTGTCCGTGCATCAT+TGG + chr2.1:6941421-6941440 MS.gene45483:intron 45.0%
! GTTCCCGATACGTTTTGCAT+CGG + chr2.1:6941392-6941411 MS.gene45483:intron 45.0%
! TTTTCTCTTGGCATGTTGGC+AGG + chr2.1:6943068-6943087 MS.gene45483:intron 45.0%
!! TTCACTGATGGTGGACTGTT+TGG - chr2.1:6941223-6941242 None:intergenic 45.0%
!!! GTGTTTTTTTGAAGGGTGGG+AGG - chr2.1:6943137-6943156 None:intergenic 45.0%
!!! TGAGCTGTTTTTGAAGGAGG+AGG - chr2.1:6939798-6939817 None:intergenic 45.0%
!! AATTAATGAAAAATTAAAAA+AGG - chr2.1:6940042-6940061 None:intergenic 5.0%
!! ATTAATGAAAAATTAAAAAA+GGG - chr2.1:6940041-6940060 None:intergenic 5.0%
!!! CTTATTAATTTTAAAAAAAT+TGG - chr2.1:6942035-6942054 None:intergenic 5.0%
!!! TTTTTTTAATTTATACTTAT+TGG + chr2.1:6940160-6940179 MS.gene45483:intron 5.0%
AATAGACATGCCTGGCCGAA+AGG - chr2.1:6943553-6943572 None:intergenic 50.0%
AATAGCAAGAAACGAGGGGC+CGG - chr2.1:6943968-6943987 None:intergenic 50.0%
ACACATCCCTTGCCAAGTGT+AGG - chr2.1:6943582-6943601 None:intergenic 50.0%
ATGTTGGCAGGCTTGGCAAT+GGG + chr2.1:6943080-6943099 MS.gene45483:intron 50.0%
CACATCCCTTGCCAAGTGTA+GGG - chr2.1:6943581-6943600 None:intergenic 50.0%
GAGATCCCTACACTTGGCAA+GGG + chr2.1:6943573-6943592 MS.gene45483:intron 50.0%
GGGATCTCAATAGACATGCC+TGG - chr2.1:6943561-6943580 None:intergenic 50.0%
GGTCGGATACTGATACTCCT+AGG - chr2.1:6942102-6942121 None:intergenic 50.0%
GTTCGACGGAAAGCTCATGA+TGG - chr2.1:6941197-6941216 None:intergenic 50.0%
TAACCATTTGGGTCATCCCC+AGG - chr2.1:6941558-6941577 None:intergenic 50.0%
TGAGATCCCTACACTTGGCA+AGG + chr2.1:6943572-6943591 MS.gene45483:intron 50.0%
TTCCACGTATGCTCTCTTGC+AGG + chr2.1:6942421-6942440 MS.gene45483:intron 50.0%
! GGTTTCGTCGACTAAACCAG+CGG - chr2.1:6939943-6939962 None:intergenic 50.0%
! TACCTGCAAGAGAGCATACG+TGG - chr2.1:6942426-6942445 None:intergenic 50.0%
! TGCAGTATATCCTGATGGGC+GGG + chr2.1:6941509-6941528 MS.gene45483:intron 50.0%
! TTGAAGGAGGAGGCTTGCTT+GGG - chr2.1:6939788-6939807 None:intergenic 50.0%
! TTTGAAGGAGGAGGCTTGCT+TGG - chr2.1:6939789-6939808 None:intergenic 50.0%
!! CACTCATGGTGGACAAGAAG+TGG - chr2.1:6942342-6942361 None:intergenic 50.0%
ACCAGCGGAAAAGCCATCGA+CGG - chr2.1:6939928-6939947 None:intergenic 55.0%
ATGAGCTTGCAAGTGAGCGC+TGG + chr2.1:6941577-6941596 MS.gene45483:CDS 55.0%
CATGTTGGCAGGCTTGGCAA+TGG + chr2.1:6943079-6943098 MS.gene45483:intron 55.0%
CCCTGAACTTGTGGCAGGAA+GGG - chr2.1:6943167-6943186 None:intergenic 55.0%
CCCTTCCTGCCACAAGTTCA+GGG + chr2.1:6943164-6943183 MS.gene45483:CDS 55.0%
CCTGAACTTGTGGCAGGAAG+GGG - chr2.1:6943166-6943185 None:intergenic 55.0%
CCTGTGACTTCCGCACACAT+CGG - chr2.1:6943927-6943946 None:intergenic 55.0%
CCTTCCTGCCACAAGTTCAG+GGG + chr2.1:6943165-6943184 MS.gene45483:CDS 55.0%
GATATGCAAACCCGCCCATC+AGG - chr2.1:6941522-6941541 None:intergenic 55.0%
TCTTGGCATGTTGGCAGGCT+TGG + chr2.1:6943073-6943092 MS.gene45483:intron 55.0%
TGCAGAAGGAGTGGAGAGAC+AGG + chr2.1:6943875-6943894 MS.gene45483:intron 55.0%
TGTTGGCAGGCTTGGCAATG+GGG + chr2.1:6943081-6943100 MS.gene45483:intron 55.0%
TTCACCCCTGAACTTGTGGC+AGG - chr2.1:6943172-6943191 None:intergenic 55.0%
CCAGCGGAAAAGCCATCGAC+GGG - chr2.1:6939927-6939946 None:intergenic 60.0%
CCATTTGGGTCATCCCCAGG+AGG - chr2.1:6941555-6941574 None:intergenic 60.0%
CCCCTGAACTTGTGGCAGGA+AGG - chr2.1:6943168-6943187 None:intergenic 60.0%
CCCCTTCCTGCCACAAGTTC+AGG + chr2.1:6943163-6943182 MS.gene45483:CDS 60.0%
CCGATGTGTGCGGAAGTCAC+AGG + chr2.1:6943924-6943943 MS.gene45483:CDS 60.0%
CCTCCTGGGGATGACCCAAA+TGG + chr2.1:6941552-6941571 MS.gene45483:CDS 60.0%
GCTTGGCAATGGGGCAGGTA+GGG + chr2.1:6943090-6943109 MS.gene45483:intron 60.0%
GGCGTGTCGAGAATGAGACG+TGG + chr2.1:6942819-6942838 MS.gene45483:intron 60.0%
! AAGGAGGAGGCTTGCTTGGG+AGG - chr2.1:6939785-6939804 None:intergenic 60.0%
!! AGACGTGGGTTAGGGTGAGC+AGG - chr2.1:6943235-6943254 None:intergenic 60.0%
!! GACGTGGGTTAGGGTGAGCA+GGG - chr2.1:6943234-6943253 None:intergenic 60.0%
GCAATGGGGCAGGTAGGGAC+GGG + chr2.1:6943095-6943114 MS.gene45483:intron 65.0%
GGCAATGGGGCAGGTAGGGA+CGG + chr2.1:6943094-6943113 MS.gene45483:intron 65.0%
GGCTTGGCAATGGGGCAGGT+AGG + chr2.1:6943089-6943108 MS.gene45483:intron 65.0%
GGGTTAGGGTGAGCAGGGTG+TGG - chr2.1:6943229-6943248 None:intergenic 65.0%
! CCCGTCGATGGCTTTTCCGC+TGG + chr2.1:6939924-6939943 MS.gene45483:CDS 65.0%
GGCAGGCTTGGCAATGGGGC+AGG + chr2.1:6943085-6943104 MS.gene45483:intron 70.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 6939778 6943991 6939778 ID=MS.gene45483
chr2.1 mRNA 6939778 6943991 6939778 ID=MS.gene45483.t1;Parent=MS.gene45483
chr2.1 exon 6939778 6939820 6939778 ID=MS.gene45483.t1.exon1;Parent=MS.gene45483.t1
chr2.1 CDS 6939778 6939820 6939778 ID=cds.MS.gene45483.t1;Parent=MS.gene45483.t1
chr2.1 exon 6939910 6940012 6939910 ID=MS.gene45483.t1.exon2;Parent=MS.gene45483.t1
chr2.1 CDS 6939910 6940012 6939910 ID=cds.MS.gene45483.t1;Parent=MS.gene45483.t1
chr2.1 exon 6941174 6941271 6941174 ID=MS.gene45483.t1.exon3;Parent=MS.gene45483.t1
chr2.1 CDS 6941174 6941271 6941174 ID=cds.MS.gene45483.t1;Parent=MS.gene45483.t1
chr2.1 exon 6941514 6941614 6941514 ID=MS.gene45483.t1.exon4;Parent=MS.gene45483.t1
chr2.1 CDS 6941514 6941614 6941514 ID=cds.MS.gene45483.t1;Parent=MS.gene45483.t1
chr2.1 exon 6942443 6942520 6942443 ID=MS.gene45483.t1.exon5;Parent=MS.gene45483.t1
chr2.1 CDS 6942443 6942520 6942443 ID=cds.MS.gene45483.t1;Parent=MS.gene45483.t1
chr2.1 exon 6943107 6943186 6943107 ID=MS.gene45483.t1.exon6;Parent=MS.gene45483.t1
chr2.1 CDS 6943107 6943186 6943107 ID=cds.MS.gene45483.t1;Parent=MS.gene45483.t1
chr2.1 exon 6943880 6943991 6943880 ID=MS.gene45483.t1.exon7;Parent=MS.gene45483.t1
chr2.1 CDS 6943880 6943991 6943880 ID=cds.MS.gene45483.t1;Parent=MS.gene45483.t1
Gene Sequence

>MS.gene45483

ATGGCCTCCCAAGCAAGCCTCCTCCTTCAAAAACAGCTCAAAGGTAATCTATTCCCTTTTTTCATTGCATCGCTTATTTCAATTTCGCGTCAATTTTCCGCTATTTCTGATTAACCTTACTTTTTCTCACAGATCTTTGTAAACATCCCGTCGATGGCTTTTCCGCTGGTTTAGTCGACGAAACCAACATTTTTGAATGGAGTGTAACCATAATTGGGCCACCAGATACACTTTAGTAAGTTCTTTTTTTTTAATTAATACCCTTTTTTAATTTTTCATTAATTTATATGTTTTTCAATTGTTATTTTGTTTTTTATCTTATAAAATGATCATTTATTGGATTTTCTGTGATGGGGGTTTTGGATTTTTCACTAAAAGATCGTTTTTTTAATTTATACTTATTGGTGGGTTTTCAGAGTTTGGTTCAATTGGTTGGTTTTTGTGATTTTAATTTGCTTTTGAGTCTTTGTATTGATGATATTGTTTCATGAGGATTGAATTGAATATCAAGTAAAAGAAGTGATATTTGAAGGATTGATAAAAAAGAATACAGATTATGGCCCTGTTCGGATAAACAACTTATAGCTCAAGTGCGTATCATGACAAGCGCTTATGTGTAAGCTTACGTAAGTTATTTCGATGCTTATAGCACAAAGCACAAGCACATATCATGATAAGTGCTTATGTGTAAGCTTACATAAGTTATAGGAAAATATAAAATTAAATTGTTTTTGTATAGTTTACGTGCAAAGTTTTGATAAGCTATCCTGGAGAAGTTATGAATATAAGCTGAAAAAAGCTTACGCGAAATGTCATAAGCTGTTTTTATAAGTTCTCCCGAATAGTCTCAAAAAACTTATACCAGTTTATAAGGTCAAATAAAACAGTTATGTTTATTTTATTTTCAATGCAGCTTCTCAGTTGCAAATTATTATGCTTTCCCGGTTTATTGATTATGATATTTATTCTAGGTTTTTTTGTTGGTTTCATTTATTTGCACTGGATTTTCATTAGCTGTAGGATTTGCCTTTTGTTCTTGTTTTACAATATATGCTCCTCATCATTAATTTACTTCCTATGATTGGATTGGTTTTGGACTTTAGTGCTTTAATAGTTTTTGTTTTGTTTACTTTCTGTGATCTTGATAACATCCGAGTTTGACCAACTACTCAGCTTATTTGTTTGCACTGGATTTTCCTTAGCTGTAGGATTTGCTTGTTGTTCTTGTTTTACAATATCTGCTCCTCATCATTAATTTACTTCATCCGATTGGATTGGTTTTGGAATTTAGTGCTTTAATAGTTTTTGTTTTGTTTACTTTCTGTGATCTTAATAACACCAGAGTTTGACTAACCACTCAGCTTATTTGTTTGCCAATGCTTTCAATTTCTTGTAGTGAAGGAGGATTTTTCAATGCCATCATGAGCTTTCCGTCGAACTATCCAAACAGTCCACCATCAGTGAAGTTCACTTCAGAGATATGGCATCCCAATGGTTGGTTTTCTCTCTGATGCACAGATACGTTAAATATTGAGTGTGTCATACTCGACACATCTGTATCCGATACCCGTATTGCAGTAACATCCTATGTTTTTTAAGGAACAACATATTGTCGTTCCCGATACGTTTTGCATCGGATGCTCGTAACTTGTCCGTGCATCATTGGATTTTCTCATTTGTGACATTTCTTTGATTAAAACAGGAAGTTGAATGATGTTGTTTGTTTGTATTTGCAGTATATCCTGATGGGCGGGTTTGCATATCTATTCTTCATCCTCCTGGGGATGACCCAAATGGTTATGAGCTTGCAAGTGAGCGCTGGACACCTGTTCATACAGTACGTGAAAACATAAAACCATAAATTCAATTCGTTTATTTCTGTAGTGTGATTTCTGCTTTTCATTATTCAATTGATATTGCTGGCTAAATCAATCAACTTAGTAATAGAAATGCAGATTAGCAGTGTCTAGTATTCGTCGAGCATGCTTGTATTTAATAGGGTGTGATTTTAAGCAACAATTTATTTACAAACTTCGATAGATGCAAAATACTTGTAAAGGAAGAGAAGTTGATCAGTTCTCATTAATGTATAAAGTGACACTTGTGATCACAATTTACAGAAAGATATTCGTGATCATAACAAAAGTTGTGGGCTTTTCTTTGTTTACGAGGGAGAGAGTTTCTTTTCTTTTGATGCAGATGTATATGATTATGTCATGTTGTATCCGTGATGCATCTCCAACGTATCCGATGACCAATTTTTTTAAAATTAATAAGTTAAAAAGAAATTGGATACTTATGAGATATGCATCCAAGAGTATCCTAGGAGTATCAGTATCCGACCATCACTCATTTTAGAGTATCTGGACGCTAGAGTAGAAGCTTTCTCGGGCATGAGCCTGTAATGTTTACCTGCTATAGACTTGTTGTTTAAGACCTGGCTTGCCTTTTTAACATAACGATTTAATGCCTTACAGCTAATTTAAGTGTTAGTTGTTTCAAAGTTGTTTGACATTAATAAATTACAATAACTTTACTGAATGTCCTTGGGATATGGTATGCCACTTCTTGTCCACCATGAGTGTTTTGACATACTTGCTACTTGTAAATCTTTTAGAACCTGTTTATTTGCTTATGAATAAATTCCACGTATGCTCTCTTGCAGGTAGAGAGTATAGTGTTGAGTATCATATCGATGCTTTCTGGTCCTAATGATGAATCTCCGGCAAATGTTGAAGCTGCAGTAAGTTTGACCTTTTTTCTTATTTACATGATTTTGTTATTGCCATCTTCACCACACTTCTCTTTTTATACTTATTTGCGTCCTAGAGAAGTAAAGGCAAACCGATATTGATCTAGATAATTGTGCAAAGGCTTTGTTTTACTAATAATATGTTATGGACTTGGTTCCTTTATTTACTAGTAAAACACTATGTCCTTGGATTGCTTTAATGCTACATATATTCCAATTATTTATGTAGATATCTCTTTAAGATTGAGTATTTAATATAGTTCAGTTCTGATACGTTGATAATAACTACGGCGTGTCGAGAATGAGACGTGGAATTATATATTATACAAGCATGTATAGTTTAATACTTCTCTAATAATTAGTAGATACGAAAGTGGGATAATTTCTTTGTTTACCAAGTTTGAGTTTTATGAGCGATTGAATACAATTGAAAAATTGATAATATCAATATAGTAGTTTAGGCATTACTCTTTAGGTTTAGACTTTAAACGAAACACAACTTTTGTAATTGAAGCACATAAGAAAATATGAGAATGCTTTTTCTCTTGGCATGTTGGCAGGCTTGGCAATGGGGCAGGTAGGGACGGGCTTTGCTCAACACAACCCTCCCACCCTTCAAAAAAACACTCGACACCCCTTCCTGCCACAAGTTCAGGGGTGAAAATCCCAACTTAGTCCCACAAGAAAATATTAAAACCACACCCTGCTCACCCTAACCCACGTCTTGAATACTTTGAATAATTAGTTATAAAAATAATATTTAGATGTATTTGTACAACAATAATCTTATAACTAATATATCATTTCAAGAAAAGTATAAGACATTTTAAAATGTGTTAAACTAGTAACTACTAGGCATGTCCATACTGATAATACGTGGAATGTCTTGTATGCAAAGGTCACTACTAGTAGTTATTATCAACGGACATCAGAACTTAGCGCCTAATATCTTTTGCCTGTTTTTTATAGCTTTCTTAAAATTGAATTTCTGTTGAGTGATTTTTCCTCTGTTTTAAGATTCCTTTCGGCCAGGCATGTCTATTGAGATCCCTACACTTGGCAAGGGATGTGTAGTATTAGGAATTTAGGAGCCCAATTGTCACCATTAGTGTTGTCAATTGTGGATCGCCGAAAAAAGCTGTTTGTTCAACAATTGTATGTGTCATTTTGAGTACTGAAGGATTTAATATATTATTCTGTTACTTTTTATTATGAAAATTCCTCTGTCCTAAAAGTACACATTGCTGTTGCTATTATCCTAATTGATACAGTGTATAGCACTTCAATCTTGACAGTTTGGAATATTGTTTTGGAACTTTTACTTAGACCTGTGTGATGTTTATATTGCAGAAGGAGTGGAGAGACAGGAGAGACGATTTCAAGAAAAAGGTTAGCCGATGTGTGCGGAAGTCACAGGAAATGTTGTGATTCACAGCCGGCCCCTCGTTTCTTGCTATTGTGA
Protein sequence

>MS.gene45483.t1

MASQASLLLQKQLKDLCKHPVDGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPSVKFTSEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSGPNDESPANVEAAVGTGFAQHNPPTLQKNTRHPFLPQVQGRSGETGETISRKRLADVCGSHRKCCDSQPAPRFLLL