AlfalfaGEDB | MS.gene46462

M. sativa cultivar XinJiangDaYe / MS.gene46462

KEGG: -
GO: -
PFAM: PF03018.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene46462.t1	XP_013467712.1	97.9	192	4	0	1	192	1	192	8.60E-98	366.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene46462.t1	Q9SS03	50.3	193	90	4	1	191	1	189	7.2e-45	181.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene46462.t1	A0A072VI95	97.9	192	4	0	1	192	1	192	6.2e-98	366.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene46462	MS.gene90969	PPI
MS.gene33418	MS.gene46462	PPI
MS.gene06035	MS.gene46462	PPI
MS.gene46462	MS.gene034592	PPI
MS.gene46462	MS.gene33676	PPI
MS.gene98692	MS.gene46462	PPI
MS.gene52084	MS.gene46462	PPI
MS.gene057717	MS.gene46462	PPI
MS.gene24969	MS.gene46462	PPI
MS.gene33677	MS.gene46462	PPI
MS.gene55766	MS.gene46462	PPI
MS.gene33420	MS.gene46462	PPI
MS.gene024359	MS.gene46462	PPI
MS.gene24971	MS.gene46462	PPI
MS.gene46462	MS.gene068292	PPI
MS.gene068578	MS.gene46462	PPI
MS.gene39163	MS.gene46462	PPI
MS.gene46462	MS.gene06033	PPI
MS.gene003512	MS.gene46462	PPI
MS.gene048891	MS.gene46462	PPI
MS.gene55764	MS.gene46462	PPI
MS.gene071329	MS.gene46462	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene46462.t1	MTR_1g054525	97.917	192	4	0	1	192	1	192	2.68e-138	384
MS.gene46462.t1	MTR_4g013345	56.897	174	73	1	21	192	23	196	1.17e-67	205
MS.gene46462.t1	MTR_4g013350	56.831	183	74	2	15	192	15	197	3.37e-67	204
MS.gene46462.t1	MTR_4g013335	58.788	165	64	2	30	192	34	196	4.58e-67	204
MS.gene46462.t1	MTR_4g013320	57.576	165	68	1	30	192	35	199	1.89e-66	202
MS.gene46462.t1	MTR_4g013330	56.886	167	68	2	30	192	33	199	1.79e-64	197
MS.gene46462.t1	MTR_4g013325	62.759	145	52	1	50	192	55	199	2.02e-62	192
MS.gene46462.t1	MTR_7g093850	50.000	200	86	6	1	192	1	194	3.36e-61	189
MS.gene46462.t1	MTR_7g093820	50.000	198	89	5	1	192	1	194	1.88e-60	187
MS.gene46462.t1	MTR_4g013310	50.610	164	81	0	29	192	34	197	1.15e-59	185
MS.gene46462.t1	MTR_7g093830	49.231	195	94	4	1	192	1	193	2.67e-58	181
MS.gene46462.t1	MTR_7g070390	48.404	188	88	5	13	192	6	192	1.31e-56	177
MS.gene46462.t1	MTR_7g093870	52.353	170	73	4	30	192	25	193	2.74e-55	174
MS.gene46462.t1	MTR_4g013385	46.409	181	92	3	14	192	13	190	5.51e-55	173
MS.gene46462.t1	MTR_0433s0040	46.409	181	92	3	14	192	13	190	5.51e-55	173
MS.gene46462.t1	MTR_7g093790	46.486	185	92	4	11	192	11	191	1.14e-54	172
MS.gene46462.t1	MTR_4g013770	46.023	176	90	3	20	192	18	191	8.93e-50	160
MS.gene46462.t1	MTR_4g073950	50.000	152	73	2	44	192	41	192	6.83e-49	157
MS.gene46462.t1	MTR_4g013355	44.809	183	82	4	17	192	9	179	3.85e-47	152
MS.gene46462.t1	MTR_4g078885	48.322	149	73	3	46	192	39	185	6.69e-46	149
MS.gene46462.t1	MTR_3g034030	48.322	149	73	3	46	192	39	185	2.96e-45	148
MS.gene46462.t1	MTR_5g096120	43.979	191	97	4	8	192	3	189	4.83e-43	142
MS.gene46462.t1	MTR_3g105630	43.850	187	92	5	14	192	8	189	6.13e-43	142
MS.gene46462.t1	MTR_1g056370	47.682	151	75	3	44	191	36	185	1.91e-42	141
MS.gene46462.t1	MTR_3g105640	45.513	156	79	4	42	192	34	188	1.19e-38	131
MS.gene46462.t1	MTR_4g122110	36.301	146	91	1	49	192	35	180	2.56e-26	99.8
MS.gene46462.t1	MTR_4g122130	33.871	186	110	3	11	192	4	180	4.20e-26	99.0
MS.gene46462.t1	MTR_4g049570	33.824	136	90	0	43	178	27	162	2.04e-18	79.0
MS.gene46462.t1	MTR_4g049550	30.337	178	103	3	7	176	4	168	3.58e-17	75.9
MS.gene46462.t1	MTR_1g046490	38.889	90	54	1	81	170	121	209	4.03e-15	71.2
MS.gene46462.t1	MTR_1g046800	36.697	109	66	2	62	170	118	223	7.76e-15	70.9
MS.gene46462.t1	MTR_1g046500	40.000	90	53	1	81	170	135	223	1.49e-14	70.1
MS.gene46462.t1	MTR_8g099115	32.394	142	85	4	42	175	32	170	4.87e-14	67.4
MS.gene46462.t1	MTR_1g115510	32.353	170	98	6	37	191	186	353	1.00e-13	68.6
MS.gene46462.t1	MTR_7g021300	31.690	142	83	5	60	189	248	387	9.47e-12	63.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene46462.t1	AT1G55210	49.744	195	87	5	1	192	1	187	2.88e-60	186
MS.gene46462.t1	AT1G55210	49.744	195	87	5	1	192	1	187	2.88e-60	186
MS.gene46462.t1	AT1G58170	55.263	152	66	1	43	192	34	185	1.22e-59	184
MS.gene46462.t1	AT1G65870	53.488	172	75	3	22	191	21	189	3.77e-59	183
MS.gene46462.t1	AT5G49040	47.778	180	92	1	15	192	12	191	1.18e-57	180
MS.gene46462.t1	AT5G42500	52.349	149	71	0	43	191	37	185	2.10e-56	176
MS.gene46462.t1	AT1G22900	48.000	175	86	1	17	191	24	193	6.58e-56	175
MS.gene46462.t1	AT5G42510	51.007	149	73	0	43	191	34	182	9.78e-55	172
MS.gene46462.t1	AT3G13650	46.667	195	92	6	1	192	1	186	1.67e-51	164
MS.gene46462.t1	AT3G13662	53.103	145	65	2	33	177	27	168	6.69e-51	162
MS.gene46462.t1	AT2G21100	49.324	148	73	1	46	191	40	187	2.05e-49	159
MS.gene46462.t1	AT2G21100	49.324	148	73	1	46	191	40	187	2.05e-49	159
MS.gene46462.t1	AT5G49030	46.821	173	92	0	15	187	12	184	5.67e-48	167
MS.gene46462.t1	AT3G13660	58.120	117	47	1	78	192	9	125	7.19e-43	140
MS.gene46462.t1	AT4G38700	38.421	190	104	6	13	192	4	190	1.16e-39	134
MS.gene46462.t1	AT2G21110	38.919	185	101	3	14	192	8	186	1.45e-38	131
MS.gene46462.t1	AT3G58090	55.963	109	46	1	85	191	163	271	9.40e-37	129
MS.gene46462.t1	AT3G24020	28.889	135	87	3	61	189	110	241	1.00e-12	65.1
MS.gene46462.t1	AT4G13580	28.889	135	87	3	61	189	111	242	3.34e-12	63.5
MS.gene46462.t1	AT4G11190	27.891	147	99	3	36	176	20	165	3.61e-11	59.7

Find 59 sgRNAs with CRISPR-Local

Find 76 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGGAAGTAATCTCAGTGTTT+TGG	0.259860	1.4:-44875481	MS.gene46462:CDS
TGTGGAGTCCTAGGGTTGTT+GGG	0.287660	1.4:+44875775	None:intergenic
GGAGTTTGAGAAGAAAAGTT+TGG	0.338843	1.4:+44875878	None:intergenic
GACTCTGGACGCGCTGTTAA+CGG	0.346805	1.4:+44875612	None:intergenic
TCCTAGGGTTGTTGGGGAGA+TGG	0.354171	1.4:+44875782	None:intergenic
ACTCTGGACGCGCTGTTAAC+GGG	0.357904	1.4:+44875613	None:intergenic
GAGGAAGGAGATGAGGGATA+AGG	0.365889	1.4:+44875851	None:intergenic
AGGAAGGAGATGAGGGATAA+GGG	0.373236	1.4:+44875852	None:intergenic
TTGTGGAGTCCTAGGGTTGT+TGG	0.373760	1.4:+44875774	None:intergenic
TTTGAGGTTTGTGGAGTCCT+AGG	0.379817	1.4:+44875766	None:intergenic
ATGCCGGTTGTGGGTGGTAG+TGG	0.389118	1.4:-44875426	MS.gene46462:CDS
TTCACACGAGGGAAGTATAA+TGG	0.406207	1.4:-44875501	MS.gene46462:CDS
AGGCGACCCGAACGGCGGTT+TGG	0.433161	1.4:+44875694	None:intergenic
GATGGTTTGTATGAAAGAAT+GGG	0.444329	1.4:+44875800	None:intergenic
CGTGAGAGAGATGCCGGTTG+TGG	0.463566	1.4:-44875436	MS.gene46462:CDS
AACCCACTACCACCCACAAC+CGG	0.476541	1.4:+44875423	None:intergenic
AGATGGTTTGTATGAAAGAA+TGG	0.477336	1.4:+44875799	None:intergenic
TTGAGGTTTGTGGAGTCCTA+GGG	0.486598	1.4:+44875767	None:intergenic
GATGAAGAGGAAGGAGATGA+GGG	0.486928	1.4:+44875845	None:intergenic
GTGGAGTCCTAGGGTTGTTG+GGG	0.490912	1.4:+44875776	None:intergenic
TGGGTTGTTCAGATTTGCAA+GGG	0.492504	1.4:-44875406	MS.gene46462:CDS
ACAACTTCGGAATTTGACTC+TGG	0.493143	1.4:+44875597	None:intergenic
TTGTGCTCTTCCCACAACTT+CGG	0.508067	1.4:+44875584	None:intergenic
CGTGGAAGTAGAAGCGGATG+TGG	0.512512	1.4:+44875736	None:intergenic
TGCCGGTTGTGGGTGGTAGT+GGG	0.514800	1.4:-44875425	MS.gene46462:CDS
GGAGATGAGGGATAAGGGAA+AGG	0.523065	1.4:+44875857	None:intergenic
TGATGAAGAGGAAGGAGATG+AGG	0.529995	1.4:+44875844	None:intergenic
GTGGGTTGTTCAGATTTGCA+AGG	0.530567	1.4:-44875407	MS.gene46462:CDS
TGAGAAGAAAAGTTTGGCCA+TGG	0.531092	1.4:+44875884	None:intergenic
TCAGCTTCACAAAGTGAAGT+GGG	0.538538	1.4:-44875549	MS.gene46462:CDS
ATGGTTTGTATGAAAGAATG+GGG	0.540316	1.4:+44875801	None:intergenic
GTGAGAGAGATGCCGGTTGT+GGG	0.540631	1.4:-44875435	MS.gene46462:CDS
AAGTGAAGTGGGGTTTCTCA+TGG	0.553881	1.4:-44875538	MS.gene46462:CDS
AAATGCATTAGAAGCTATTG+TGG	0.554492	1.4:-44875355	MS.gene46462:CDS
CTTAACTTTGCTTTCACACG+AGG	0.556653	1.4:-44875513	MS.gene46462:CDS
ACCATCTCCCCAACAACCCT+AGG	0.559583	1.4:-44875783	MS.gene46462:CDS
ATCCGCCGTGAGAGAGATGC+CGG	0.574343	1.4:-44875442	MS.gene46462:CDS
AGAGTCAAATTCCGAAGTTG+TGG	0.583818	1.4:-44875595	MS.gene46462:CDS
TGGTAATGGTGGTGATGAAG+AGG	0.589837	1.4:+44875832	None:intergenic
TTCAGCTTCACAAAGTGAAG+TGG	0.590042	1.4:-44875550	MS.gene46462:CDS
GAGTCAAATTCCGAAGTTGT+GGG	0.591067	1.4:-44875594	MS.gene46462:CDS
GAAGTTGTGGGAAGAGCACA+AGG	0.595582	1.4:-44875582	MS.gene46462:CDS
AACCACTGAACCAAAACCCG+TGG	0.598362	1.4:+44875647	None:intergenic
TTCTACTTCCACGACATCAT+CGG	0.602306	1.4:-44875726	MS.gene46462:CDS
ACCACTGAACCAAAACCCGT+GGG	0.602599	1.4:+44875648	None:intergenic
CAGCTTCACAAAGTGAAGTG+GGG	0.608402	1.4:-44875548	MS.gene46462:CDS
TACTTCCACGACATCATCGG+CGG	0.610065	1.4:-44875723	MS.gene46462:CDS
CACAACCGGCATCTCTCTCA+CGG	0.612074	1.4:+44875437	None:intergenic
TGGAGATGAGGCGACCCGAA+CGG	0.612492	1.4:+44875686	None:intergenic
CACTGAACCAAAACCCGTGG+GGG	0.622706	1.4:+44875650	None:intergenic
TGATGTCGTGGAAGTAGAAG+CGG	0.627685	1.4:+44875730	None:intergenic
AGAGAGATGCCGGTTGTGGG+TGG	0.647672	1.4:-44875432	MS.gene46462:CDS
AATGGTGGTGATGAAGAGGA+AGG	0.649403	1.4:+44875836	None:intergenic
AGATGAGGCGACCCGAACGG+CGG	0.674540	1.4:+44875689	None:intergenic
GGGTTGTTCAGATTTGCAAG+GGG	0.683015	1.4:-44875405	MS.gene46462:CDS
GGTTGTTCAGATTTGCAAGG+GGG	0.683578	1.4:-44875404	MS.gene46462:CDS
TTAACTTTGCTTTCACACGA+GGG	0.700908	1.4:-44875512	MS.gene46462:CDS
CCACTGAACCAAAACCCGTG+GGG	0.704423	1.4:+44875649	None:intergenic
AACCGGCATCTCTCTCACGG+CGG	0.738069	1.4:+44875440	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	AAATGCATTAGAAGCTATTG+TGG	-	chr1.4:44875853-44875872	MS.gene46462:CDS	30.0%
!	AGATGGTTTGTATGAAAGAA+TGG	+	chr1.4:44875412-44875431	None:intergenic	30.0%
!	ATGGTTTGTATGAAAGAATG+GGG	+	chr1.4:44875410-44875429	None:intergenic	30.0%
!	GATGGTTTGTATGAAAGAAT+GGG	+	chr1.4:44875411-44875430	None:intergenic	30.0%
	GGAGTTTGAGAAGAAAAGTT+TGG	+	chr1.4:44875333-44875352	None:intergenic	35.0%
	TTAACTTTGCTTTCACACGA+GGG	-	chr1.4:44875696-44875715	MS.gene46462:CDS	35.0%
!	GGAAGTAATCTCAGTGTTTT+GGG	-	chr1.4:44875728-44875747	MS.gene46462:CDS	35.0%
!	TGGAAGTAATCTCAGTGTTT+TGG	-	chr1.4:44875727-44875746	MS.gene46462:CDS	35.0%
!!!	TTTTGGTTCAGTGGTTATGA+TGG	-	chr1.4:44875568-44875587	MS.gene46462:CDS	35.0%
	ACAACTTCGGAATTTGACTC+TGG	+	chr1.4:44875614-44875633	None:intergenic	40.0%
	AGAGTCAAATTCCGAAGTTG+TGG	-	chr1.4:44875613-44875632	MS.gene46462:CDS	40.0%
	CTTAACTTTGCTTTCACACG+AGG	-	chr1.4:44875695-44875714	MS.gene46462:CDS	40.0%
	GAGTCAAATTCCGAAGTTGT+GGG	-	chr1.4:44875614-44875633	MS.gene46462:CDS	40.0%
	TCAGCTTCACAAAGTGAAGT+GGG	-	chr1.4:44875659-44875678	MS.gene46462:CDS	40.0%
	TGGGTTGTTCAGATTTGCAA+GGG	-	chr1.4:44875802-44875821	MS.gene46462:CDS	40.0%
	TTCAGCTTCACAAAGTGAAG+TGG	-	chr1.4:44875658-44875677	MS.gene46462:CDS	40.0%
	TTCTACTTCCACGACATCAT+CGG	-	chr1.4:44875482-44875501	MS.gene46462:CDS	40.0%
!	TTCACACGAGGGAAGTATAA+TGG	-	chr1.4:44875707-44875726	MS.gene46462:CDS	40.0%
!!	TTTTTCAGTGGTTGGAGATG+AGG	+	chr1.4:44875537-44875556	None:intergenic	40.0%
!!!	GGCTTAGTTTTTGAGGTTTG+TGG	+	chr1.4:44875454-44875473	None:intergenic	40.0%
!!!	GTAATCTCAGTGTTTTGGGA+AGG	-	chr1.4:44875732-44875751	MS.gene46462:CDS	40.0%
	AAAAAACCAAACCGCCGTTC+GGG	-	chr1.4:44875508-44875527	MS.gene46462:CDS	45.0%
	AACCACTGAAAAATCCCCCA+CGG	-	chr1.4:44875544-44875563	MS.gene46462:CDS	45.0%
	AAGTGAAGTGGGGTTTCTCA+TGG	-	chr1.4:44875670-44875689	MS.gene46462:CDS	45.0%
	AGGAAGGAGATGAGGGATAA+GGG	+	chr1.4:44875359-44875378	None:intergenic	45.0%
	CAGCTTCACAAAGTGAAGTG+GGG	-	chr1.4:44875660-44875679	MS.gene46462:CDS	45.0%
	GAAAAAACCAAACCGCCGTT+CGG	-	chr1.4:44875507-44875526	MS.gene46462:CDS	45.0%
	GATGAAGAGGAAGGAGATGA+GGG	+	chr1.4:44875366-44875385	None:intergenic	45.0%
	GGGTTGTTCAGATTTGCAAG+GGG	-	chr1.4:44875803-44875822	MS.gene46462:CDS	45.0%
	GGTTGTTCAGATTTGCAAGG+GGG	-	chr1.4:44875804-44875823	MS.gene46462:CDS	45.0%
	TGATGAAGAGGAAGGAGATG+AGG	+	chr1.4:44875367-44875386	None:intergenic	45.0%
	TGATGTCGTGGAAGTAGAAG+CGG	+	chr1.4:44875481-44875500	None:intergenic	45.0%
	TTGAGGTTTGTGGAGTCCTA+GGG	+	chr1.4:44875444-44875463	None:intergenic	45.0%
	TTGTGCTCTTCCCACAACTT+CGG	+	chr1.4:44875627-44875646	None:intergenic	45.0%
!	AATGGTGGTGATGAAGAGGA+AGG	+	chr1.4:44875375-44875394	None:intergenic	45.0%
!	GAAAGAATGGGGTTTTGCTG+TGG	+	chr1.4:44875399-44875418	None:intergenic	45.0%
!	GTGGGTTGTTCAGATTTGCA+AGG	-	chr1.4:44875801-44875820	MS.gene46462:CDS	45.0%
!	TTTGAGGTTTGTGGAGTCCT+AGG	+	chr1.4:44875445-44875464	None:intergenic	45.0%
!!	ATGGGGTTTTGCTGTGGTAA+TGG	+	chr1.4:44875393-44875412	None:intergenic	45.0%
!!	CGGATGTGGCTTAGTTTTTG+AGG	+	chr1.4:44875461-44875480	None:intergenic	45.0%
!!	TGGTAATGGTGGTGATGAAG+AGG	+	chr1.4:44875379-44875398	None:intergenic	45.0%
	AACCACTGAACCAAAACCCG+TGG	+	chr1.4:44875564-44875583	None:intergenic	50.0%
	ACCACTGAAAAATCCCCCAC+GGG	-	chr1.4:44875545-44875564	MS.gene46462:CDS	50.0%
	ACCACTGAACCAAAACCCGT+GGG	+	chr1.4:44875563-44875582	None:intergenic	50.0%
	GAGGAAGGAGATGAGGGATA+AGG	+	chr1.4:44875360-44875379	None:intergenic	50.0%
	GGAGATGAGGGATAAGGGAA+AGG	+	chr1.4:44875354-44875373	None:intergenic	50.0%
	TACTTCCACGACATCATCGG+CGG	-	chr1.4:44875485-44875504	MS.gene46462:CDS	50.0%
	TGTGGAGTCCTAGGGTTGTT+GGG	+	chr1.4:44875436-44875455	None:intergenic	50.0%
	TTGTGGAGTCCTAGGGTTGT+TGG	+	chr1.4:44875437-44875456	None:intergenic	50.0%
!	GAAAAATCCCCCACGGGTTT+TGG	-	chr1.4:44875551-44875570	MS.gene46462:CDS	50.0%
!	GAAGTTGTGGGAAGAGCACA+AGG	-	chr1.4:44875626-44875645	MS.gene46462:CDS	50.0%
!	TTTTTCCGCCGATGATGTCG+TGG	+	chr1.4:44875493-44875512	None:intergenic	50.0%
!!	GTGGGGGATTTTTCAGTGGT+TGG	+	chr1.4:44875545-44875564	None:intergenic	50.0%
!!!	GGGTTTTGCTGTGGTAATGG+TGG	+	chr1.4:44875390-44875409	None:intergenic	50.0%
	AACCCACTACCACCCACAAC+CGG	+	chr1.4:44875788-44875807	None:intergenic	55.0%
	ACCATCTCCCCAACAACCCT+AGG	-	chr1.4:44875425-44875444	MS.gene46462:CDS	55.0%
	ACTCTGGACGCGCTGTTAAC+GGG	+	chr1.4:44875598-44875617	None:intergenic	55.0%
	CACAACCGGCATCTCTCTCA+CGG	+	chr1.4:44875774-44875793	None:intergenic	55.0%
	CACTGAACCAAAACCCGTGG+GGG	+	chr1.4:44875561-44875580	None:intergenic	55.0%
	CCACTGAACCAAAACCCGTG+GGG	+	chr1.4:44875562-44875581	None:intergenic	55.0%
	CGTGGAAGTAGAAGCGGATG+TGG	+	chr1.4:44875475-44875494	None:intergenic	55.0%
	GACTCTGGACGCGCTGTTAA+CGG	+	chr1.4:44875599-44875618	None:intergenic	55.0%
	GTGGAGTCCTAGGGTTGTTG+GGG	+	chr1.4:44875435-44875454	None:intergenic	55.0%
	TCCTAGGGTTGTTGGGGAGA+TGG	+	chr1.4:44875429-44875448	None:intergenic	55.0%
!	GTGAGAGAGATGCCGGTTGT+GGG	-	chr1.4:44875773-44875792	MS.gene46462:CDS	55.0%
!!	ACCCGTGGGGGATTTTTCAG+TGG	+	chr1.4:44875549-44875568	None:intergenic	55.0%
	AACCGGCATCTCTCTCACGG+CGG	+	chr1.4:44875771-44875790	None:intergenic	60.0%
	ATCCGCCGTGAGAGAGATGC+CGG	-	chr1.4:44875766-44875785	MS.gene46462:CDS	60.0%
	TGGAGATGAGGCGACCCGAA+CGG	+	chr1.4:44875525-44875544	None:intergenic	60.0%
!	AGAGAGATGCCGGTTGTGGG+TGG	-	chr1.4:44875776-44875795	MS.gene46462:CDS	60.0%
!	ATGCCGGTTGTGGGTGGTAG+TGG	-	chr1.4:44875782-44875801	MS.gene46462:CDS	60.0%
!	CGTGAGAGAGATGCCGGTTG+TGG	-	chr1.4:44875772-44875791	MS.gene46462:CDS	60.0%
!	TGCCGGTTGTGGGTGGTAGT+GGG	-	chr1.4:44875783-44875802	MS.gene46462:CDS	60.0%
!!!	CCCCACGGGTTTTGGTTCAG+TGG	-	chr1.4:44875559-44875578	MS.gene46462:CDS	60.0%
	AGATGAGGCGACCCGAACGG+CGG	+	chr1.4:44875522-44875541	None:intergenic	65.0%
	AGGCGACCCGAACGGCGGTT+TGG	+	chr1.4:44875517-44875536	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.4	gene	44875326	44875904	44875326	ID=MS.gene46462
chr1.4	mRNA	44875326	44875904	44875326	ID=MS.gene46462.t1;Parent=MS.gene46462
chr1.4	exon	44875326	44875904	44875326	ID=MS.gene46462.t1.exon1;Parent=MS.gene46462.t1
chr1.4	CDS	44875326	44875904	44875326	ID=cds.MS.gene46462.t1;Parent=MS.gene46462.t1

Gene Sequence

>MS.gene46462

ATGGCCAAACTTTTCTTCTCAAACTCCTTTCCCTTATCCCTCATCTCCTTCCTCTTCATCACCACCATTACCACAGCAAAACCCCATTCTTTCATACAAACCATCTCCCCAACAACCCTAGGACTCCACAAACCTCAAAAACTAAGCCACATCCGCTTCTACTTCCACGACATCATCGGCGGAAAAAACCAAACCGCCGTTCGGGTCGCCTCATCTCCAACCACTGAAAAATCCCCCACGGGTTTTGGTTCAGTGGTTATGATGGACGACCCGTTAACAGCGCGTCCAGAGTCAAATTCCGAAGTTGTGGGAAGAGCACAAGGAATCTATGCTTCAGCTTCACAAAGTGAAGTGGGGTTTCTCATGGTGCTTAACTTTGCTTTCACACGAGGGAAGTATAATGGAAGTAATCTCAGTGTTTTGGGAAGGAATACGATCGAATCCGCCGTGAGAGAGATGCCGGTTGTGGGTGGTAGTGGGTTGTTCAGATTTGCAAGGGGGTATGCTCAAGCTTCAACTCATTCTATAAATGCATTAGAAGCTATTGTGGAGTATAATGTTTATGTCTTTCATTATTAA

Protein sequence

>MS.gene46462.t1

MAKLFFSNSFPLSLISFLFITTITTAKPHSFIQTISPTTLGLHKPQKLSHIRFYFHDIIGGKNQTAVRVASSPTTEKSPTGFGSVVMMDDPLTARPESNSEVVGRAQGIYASASQSEVGFLMVLNFAFTRGKYNGSNLSVLGRNTIESAVREMPVVGGSGLFRFARGYAQASTHSINALEAIVEYNVYVFHY