Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90969.t1 | XP_013456495.1 | 99.5 | 192 | 1 | 0 | 1 | 192 | 1 | 192 | 1.80E-103 | 385.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90969.t1 | Q84TH6 | 58.7 | 179 | 73 | 1 | 13 | 191 | 10 | 187 | 8.8e-59 | 228.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90969.t1 | A0A072UMB1 | 99.5 | 192 | 1 | 0 | 1 | 192 | 1 | 192 | 1.3e-103 | 385.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050082 | MS.gene90969 | 0.822494 | 2.30E-53 | -1.69E-46 |
MS.gene053218 | MS.gene90969 | 0.820242 | 7.61E-53 | -1.69E-46 |
MS.gene053568 | MS.gene90969 | 0.844674 | 6.53E-59 | -1.69E-46 |
MS.gene053569 | MS.gene90969 | 0.832716 | 8.06E-56 | -1.69E-46 |
MS.gene055251 | MS.gene90969 | 0.820027 | 8.52E-53 | -1.69E-46 |
MS.gene058015 | MS.gene90969 | 0.84372 | 1.18E-58 | -1.69E-46 |
MS.gene061044 | MS.gene90969 | 0.819892 | 9.15E-53 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene46462 | MS.gene90969 | PPI |
MS.gene90969 | MS.gene034592 | PPI |
MS.gene33679 | MS.gene90969 | PPI |
MS.gene55766 | MS.gene90969 | PPI |
MS.gene33426 | MS.gene90969 | PPI |
MS.gene068294 | MS.gene90969 | PPI |
MS.gene24973 | MS.gene90969 | PPI |
MS.gene068578 | MS.gene90969 | PPI |
MS.gene39163 | MS.gene90969 | PPI |
MS.gene048891 | MS.gene90969 | PPI |
MS.gene55764 | MS.gene90969 | PPI |
MS.gene33681 | MS.gene90969 | PPI |
MS.gene33424 | MS.gene90969 | PPI |
MS.gene068291 | MS.gene90969 | PPI |
MS.gene06035 | MS.gene90969 | PPI |
MS.gene06033 | MS.gene90969 | PPI |
MS.gene33680 | MS.gene90969 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90969.t1 | MTR_4g073950 | 99.479 | 192 | 1 | 0 | 1 | 192 | 1 | 192 | 9.06e-144 | 397 |
MS.gene90969.t1 | MTR_4g013350 | 55.921 | 152 | 66 | 1 | 41 | 192 | 47 | 197 | 1.09e-60 | 187 |
MS.gene90969.t1 | MTR_4g013330 | 54.902 | 153 | 68 | 1 | 41 | 192 | 47 | 199 | 2.56e-59 | 184 |
MS.gene90969.t1 | MTR_4g013320 | 53.947 | 152 | 69 | 1 | 41 | 192 | 49 | 199 | 2.78e-57 | 179 |
MS.gene90969.t1 | MTR_4g013345 | 53.289 | 152 | 70 | 1 | 41 | 192 | 46 | 196 | 1.22e-56 | 177 |
MS.gene90969.t1 | MTR_4g013325 | 52.055 | 146 | 69 | 1 | 47 | 192 | 55 | 199 | 6.43e-54 | 171 |
MS.gene90969.t1 | MTR_7g093820 | 48.205 | 195 | 95 | 4 | 3 | 192 | 1 | 194 | 7.57e-52 | 165 |
MS.gene90969.t1 | MTR_7g093830 | 52.941 | 153 | 70 | 2 | 41 | 192 | 42 | 193 | 1.31e-51 | 164 |
MS.gene90969.t1 | MTR_4g013335 | 48.684 | 152 | 75 | 1 | 41 | 192 | 48 | 196 | 7.09e-51 | 162 |
MS.gene90969.t1 | MTR_7g093850 | 51.634 | 153 | 72 | 2 | 41 | 192 | 43 | 194 | 1.11e-50 | 162 |
MS.gene90969.t1 | MTR_7g070390 | 47.647 | 170 | 82 | 2 | 23 | 192 | 30 | 192 | 2.30e-49 | 159 |
MS.gene90969.t1 | MTR_1g054525 | 50.000 | 152 | 73 | 2 | 41 | 192 | 44 | 192 | 2.38e-49 | 159 |
MS.gene90969.t1 | MTR_7g093790 | 47.712 | 153 | 78 | 2 | 41 | 192 | 40 | 191 | 1.66e-45 | 149 |
MS.gene90969.t1 | MTR_4g013385 | 44.444 | 153 | 83 | 1 | 40 | 192 | 40 | 190 | 2.40e-45 | 148 |
MS.gene90969.t1 | MTR_0433s0040 | 44.444 | 153 | 83 | 1 | 40 | 192 | 40 | 190 | 2.40e-45 | 148 |
MS.gene90969.t1 | MTR_4g074020 | 78.313 | 83 | 18 | 0 | 3 | 85 | 1 | 83 | 2.06e-44 | 143 |
MS.gene90969.t1 | MTR_3g105640 | 46.053 | 152 | 81 | 1 | 42 | 192 | 37 | 188 | 2.85e-44 | 145 |
MS.gene90969.t1 | MTR_4g013310 | 47.020 | 151 | 77 | 2 | 42 | 192 | 50 | 197 | 3.12e-44 | 145 |
MS.gene90969.t1 | MTR_7g093870 | 42.424 | 165 | 91 | 2 | 32 | 192 | 29 | 193 | 5.47e-43 | 143 |
MS.gene90969.t1 | MTR_1g056370 | 42.208 | 154 | 86 | 2 | 39 | 191 | 34 | 185 | 1.04e-42 | 141 |
MS.gene90969.t1 | MTR_4g013770 | 42.105 | 152 | 88 | 0 | 41 | 192 | 40 | 191 | 1.58e-42 | 141 |
MS.gene90969.t1 | MTR_5g096120 | 45.033 | 151 | 78 | 3 | 46 | 192 | 40 | 189 | 7.52e-40 | 134 |
MS.gene90969.t1 | MTR_3g105630 | 38.542 | 192 | 110 | 4 | 4 | 192 | 3 | 189 | 4.50e-38 | 130 |
MS.gene90969.t1 | MTR_4g078885 | 38.667 | 150 | 89 | 1 | 43 | 192 | 39 | 185 | 4.15e-35 | 122 |
MS.gene90969.t1 | MTR_3g034030 | 37.333 | 150 | 91 | 1 | 43 | 192 | 39 | 185 | 1.70e-33 | 118 |
MS.gene90969.t1 | MTR_4g013355 | 40.260 | 154 | 79 | 3 | 40 | 192 | 38 | 179 | 7.77e-33 | 116 |
MS.gene90969.t1 | MTR_4g122110 | 39.216 | 153 | 92 | 1 | 40 | 192 | 29 | 180 | 6.18e-30 | 108 |
MS.gene90969.t1 | MTR_4g122130 | 38.217 | 157 | 95 | 2 | 36 | 192 | 26 | 180 | 1.18e-28 | 105 |
MS.gene90969.t1 | MTR_4g049550 | 32.432 | 148 | 99 | 1 | 42 | 189 | 29 | 175 | 1.94e-18 | 79.0 |
MS.gene90969.t1 | MTR_8g099115 | 32.624 | 141 | 87 | 3 | 38 | 171 | 29 | 168 | 4.89e-18 | 78.2 |
MS.gene90969.t1 | MTR_4g049570 | 31.944 | 144 | 97 | 1 | 46 | 189 | 33 | 175 | 8.74e-18 | 77.4 |
MS.gene90969.t1 | MTR_8g099135 | 29.240 | 171 | 97 | 4 | 8 | 171 | 11 | 164 | 3.08e-15 | 70.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene90969.t1 | AT2G21100 | 57.895 | 190 | 76 | 3 | 3 | 191 | 1 | 187 | 2.95e-79 | 234 |
MS.gene90969.t1 | AT2G21100 | 57.895 | 190 | 76 | 3 | 3 | 191 | 1 | 187 | 2.95e-79 | 234 |
MS.gene90969.t1 | AT1G58170 | 47.853 | 163 | 80 | 2 | 34 | 192 | 24 | 185 | 3.42e-50 | 160 |
MS.gene90969.t1 | AT5G42510 | 52.258 | 155 | 71 | 2 | 37 | 191 | 31 | 182 | 1.07e-49 | 159 |
MS.gene90969.t1 | AT5G49040 | 42.857 | 189 | 101 | 3 | 10 | 192 | 4 | 191 | 6.24e-48 | 155 |
MS.gene90969.t1 | AT5G42500 | 50.649 | 154 | 73 | 2 | 38 | 191 | 35 | 185 | 2.66e-47 | 153 |
MS.gene90969.t1 | AT1G55210 | 45.395 | 152 | 79 | 1 | 41 | 192 | 40 | 187 | 9.25e-47 | 152 |
MS.gene90969.t1 | AT1G55210 | 45.395 | 152 | 79 | 1 | 41 | 192 | 40 | 187 | 9.25e-47 | 152 |
MS.gene90969.t1 | AT3G13650 | 39.683 | 189 | 100 | 3 | 8 | 192 | 8 | 186 | 2.17e-46 | 151 |
MS.gene90969.t1 | AT1G65870 | 46.452 | 155 | 82 | 1 | 37 | 191 | 36 | 189 | 3.07e-44 | 145 |
MS.gene90969.t1 | AT1G22900 | 46.452 | 155 | 80 | 2 | 37 | 191 | 42 | 193 | 2.52e-43 | 143 |
MS.gene90969.t1 | AT2G21110 | 47.097 | 155 | 79 | 1 | 41 | 192 | 32 | 186 | 1.24e-42 | 141 |
MS.gene90969.t1 | AT3G13662 | 39.306 | 173 | 99 | 2 | 9 | 179 | 4 | 172 | 8.92e-40 | 134 |
MS.gene90969.t1 | AT3G13660 | 49.565 | 115 | 58 | 0 | 78 | 192 | 11 | 125 | 2.43e-38 | 128 |
MS.gene90969.t1 | AT5G49030 | 47.826 | 138 | 71 | 1 | 41 | 178 | 41 | 177 | 4.23e-37 | 136 |
MS.gene90969.t1 | AT4G38700 | 39.103 | 156 | 90 | 3 | 42 | 192 | 35 | 190 | 1.34e-36 | 126 |
MS.gene90969.t1 | AT3G58090 | 49.541 | 109 | 55 | 0 | 83 | 191 | 163 | 271 | 1.56e-30 | 112 |
MS.gene90969.t1 | AT4G11210 | 35.417 | 96 | 61 | 1 | 80 | 175 | 72 | 166 | 1.81e-13 | 65.9 |
MS.gene90969.t1 | AT4G11190 | 31.496 | 127 | 85 | 2 | 50 | 175 | 41 | 166 | 3.17e-11 | 60.1 |
Find 53 sgRNAs with CRISPR-Local
Find 58 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGGCCCACGAGCTTGGATTT+TGG | 0.153982 | 4.2:-34683808 | None:intergenic |
ATGCCTGTTGTTGGTGGTAC+TGG | 0.188780 | 4.2:+34683973 | MS.gene90969:CDS |
GGATCAGATGTTTCAGTTAA+AGG | 0.192736 | 4.2:-34683787 | None:intergenic |
TGAATTTAAAAGCAGGGAAT+TGG | 0.267666 | 4.2:+34683599 | MS.gene90969:CDS |
TTTAAATTCAAGCTTTGAAT+TGG | 0.322119 | 4.2:-34683586 | None:intergenic |
GGTAGCACATTTGCTCTTGT+TGG | 0.341517 | 4.2:+34683919 | MS.gene90969:CDS |
GAACTGTGTAAGGTATGTTT+TGG | 0.344125 | 4.2:-34683740 | None:intergenic |
GAATTTAAAAGCAGGGAATT+GGG | 0.356220 | 4.2:+34683600 | MS.gene90969:CDS |
TCAGCCACCTTGATCGCGCT+TGG | 0.357391 | 4.2:-34683703 | None:intergenic |
ATGCCATTGCTAAGACTCAT+TGG | 0.391423 | 4.2:+34684019 | MS.gene90969:CDS |
TTTGTGGATGGGCCGTATAA+TGG | 0.409954 | 4.2:+34683898 | MS.gene90969:CDS |
CAGCCACCTTGATCGCGCTT+GGG | 0.411876 | 4.2:-34683702 | None:intergenic |
GCAAATGTGCTACCATTATA+CGG | 0.416384 | 4.2:-34683910 | None:intergenic |
TGCCTGTTGTTGGTGGTACT+GGG | 0.417635 | 4.2:+34683974 | MS.gene90969:CDS |
TTGAGCTACTCCTTTGTGGA+TGG | 0.418314 | 4.2:+34683886 | MS.gene90969:CDS |
ACAACAGGCATCTCACGAAC+CGG | 0.421283 | 4.2:-34683961 | None:intergenic |
TCATCGTGTCAGCAGGAGAT+TGG | 0.421466 | 4.2:+34683850 | MS.gene90969:CDS |
GTCGTTGAGCTACTCCTTTG+TGG | 0.422168 | 4.2:+34683882 | MS.gene90969:CDS |
AAATTCAAGCTTTGAATTGG+TGG | 0.434298 | 4.2:-34683583 | None:intergenic |
TTGTGCTCGGCCCACGAGCT+TGG | 0.436650 | 4.2:-34683815 | None:intergenic |
CATCGTGTCAGCAGGAGATT+GGG | 0.452951 | 4.2:+34683851 | MS.gene90969:CDS |
TGCCATTGCTAAGACTCATT+GGG | 0.463052 | 4.2:+34684020 | MS.gene90969:CDS |
TAATGTTTCCGAACTGTGTA+AGG | 0.464436 | 4.2:-34683750 | None:intergenic |
TCACGAACCGGGTTCATAGC+AGG | 0.470658 | 4.2:-34683949 | None:intergenic |
CAAAGCTTGAATTTAAAAGC+AGG | 0.474536 | 4.2:+34683592 | MS.gene90969:CDS |
AAAACATACCTTACACAGTT+CGG | 0.481108 | 4.2:+34683742 | MS.gene90969:CDS |
GTTCGTGAGATGCCTGTTGT+TGG | 0.484455 | 4.2:+34683964 | MS.gene90969:CDS |
TGTCGTGGAAATAGAATTGA+AGG | 0.486021 | 4.2:-34683663 | None:intergenic |
ACTACCGGTGATGCTATTGT+TGG | 0.488037 | 4.2:+34684051 | MS.gene90969:CDS |
AGCCCAGTACCACCAACAAC+AGG | 0.489992 | 4.2:-34683976 | None:intergenic |
TGAGCTACTCCTTTGTGGAT+GGG | 0.497718 | 4.2:+34683887 | MS.gene90969:CDS |
TTCAAGCTTTGAATTGGTGG+TGG | 0.503760 | 4.2:-34683580 | None:intergenic |
TTACGCGTCATCGTGTCAGC+AGG | 0.513526 | 4.2:+34683843 | MS.gene90969:CDS |
AAAGCTTGAATTTAAAAGCA+GGG | 0.524166 | 4.2:+34683593 | MS.gene90969:CDS |
CGTGAGATGCCTGTTGTTGG+TGG | 0.528918 | 4.2:+34683967 | MS.gene90969:CDS |
TATTTCCACGACACACTAAG+TGG | 0.531204 | 4.2:+34683673 | MS.gene90969:CDS |
CATTGGGTTGATATTACTAC+CGG | 0.532156 | 4.2:+34684036 | MS.gene90969:CDS |
TGGCATAGCCCCTTGCCATA+CGG | 0.538002 | 4.2:-34684002 | None:intergenic |
AAGCTCGTGGGCCGAGCACA+AGG | 0.551866 | 4.2:+34683817 | MS.gene90969:CDS |
ACAGTTCGGAAACATTATGA+TGG | 0.564400 | 4.2:+34683756 | MS.gene90969:CDS |
AATTTAAAAGCAGGGAATTG+GGG | 0.569985 | 4.2:+34683601 | MS.gene90969:CDS |
CACGAACCGGGTTCATAGCA+GGG | 0.575135 | 4.2:-34683948 | None:intergenic |
TGATCCAAAATCCAAGCTCG+TGG | 0.590503 | 4.2:+34683804 | MS.gene90969:CDS |
CAACAGGCATCTCACGAACC+GGG | 0.593590 | 4.2:-34683960 | None:intergenic |
GTAGCCAACAATAGCATCAC+CGG | 0.603346 | 4.2:-34684055 | None:intergenic |
ACGCGTAAATACCTTGTGCT+CGG | 0.608058 | 4.2:-34683828 | None:intergenic |
AAAGAACCCTGCTATGAACC+CGG | 0.622651 | 4.2:+34683942 | MS.gene90969:CDS |
AACCCAATGAGTCTTAGCAA+TGG | 0.636728 | 4.2:-34684022 | None:intergenic |
GATCCAAAATCCAAGCTCGT+GGG | 0.650480 | 4.2:+34683805 | MS.gene90969:CDS |
ATGCTATTAATAATGAACGA+GGG | 0.675318 | 4.2:-34684085 | None:intergenic |
ATTATACGGCCCATCCACAA+AGG | 0.683112 | 4.2:-34683896 | None:intergenic |
AAACCCAAGCGCGATCAAGG+TGG | 0.710921 | 4.2:+34683699 | MS.gene90969:CDS |
AATGCTATTAATAATGAACG+AGG | 0.738092 | 4.2:-34684086 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTAAATTCAAGCTTTGAAT+TGG | - | chr4.2:34683589-34683608 | None:intergenic | 20.0% |
! | AAAGCTTGAATTTAAAAGCA+GGG | + | chr4.2:34683593-34683612 | MS.gene90969:CDS | 25.0% |
AAAACATACCTTACACAGTT+CGG | + | chr4.2:34683742-34683761 | MS.gene90969:CDS | 30.0% | |
AATTTAAAAGCAGGGAATTG+GGG | + | chr4.2:34683601-34683620 | MS.gene90969:CDS | 30.0% | |
CAAAGCTTGAATTTAAAAGC+AGG | + | chr4.2:34683592-34683611 | MS.gene90969:CDS | 30.0% | |
GAATTTAAAAGCAGGGAATT+GGG | + | chr4.2:34683600-34683619 | MS.gene90969:CDS | 30.0% | |
TGAATTTAAAAGCAGGGAAT+TGG | + | chr4.2:34683599-34683618 | MS.gene90969:CDS | 30.0% | |
!! | AAATTCAAGCTTTGAATTGG+TGG | - | chr4.2:34683586-34683605 | None:intergenic | 30.0% |
ACAGTTCGGAAACATTATGA+TGG | + | chr4.2:34683756-34683775 | MS.gene90969:CDS | 35.0% | |
GCAAATGTGCTACCATTATA+CGG | - | chr4.2:34683913-34683932 | None:intergenic | 35.0% | |
GGATCAGATGTTTCAGTTAA+AGG | - | chr4.2:34683790-34683809 | None:intergenic | 35.0% | |
TAATGTTTCCGAACTGTGTA+AGG | - | chr4.2:34683753-34683772 | None:intergenic | 35.0% | |
TGTCGTGGAAATAGAATTGA+AGG | - | chr4.2:34683666-34683685 | None:intergenic | 35.0% | |
! | GAACTGTGTAAGGTATGTTT+TGG | - | chr4.2:34683743-34683762 | None:intergenic | 35.0% |
!! | CATTGGGTTGATATTACTAC+CGG | + | chr4.2:34684036-34684055 | MS.gene90969:CDS | 35.0% |
!!! | TATGTTTTGGTCTTGTCTAC+AGG | - | chr4.2:34683730-34683749 | None:intergenic | 35.0% |
AACCCAATGAGTCTTAGCAA+TGG | - | chr4.2:34684025-34684044 | None:intergenic | 40.0% | |
ATGCCATTGCTAAGACTCAT+TGG | + | chr4.2:34684019-34684038 | MS.gene90969:CDS | 40.0% | |
TATTTCCACGACACACTAAG+TGG | + | chr4.2:34683673-34683692 | MS.gene90969:CDS | 40.0% | |
TGCCATTGCTAAGACTCATT+GGG | + | chr4.2:34684020-34684039 | MS.gene90969:CDS | 40.0% | |
! | TTTTTCCACTTAGTGTGTCG+TGG | - | chr4.2:34683681-34683700 | None:intergenic | 40.0% |
!! | TTCAAGCTTTGAATTGGTGG+TGG | - | chr4.2:34683583-34683602 | None:intergenic | 40.0% |
AAAAAACCCAAGCGCGATCA+AGG | + | chr4.2:34683696-34683715 | MS.gene90969:CDS | 45.0% | |
AAAGAACCCTGCTATGAACC+CGG | + | chr4.2:34683942-34683961 | MS.gene90969:CDS | 45.0% | |
ACGCGTAAATACCTTGTGCT+CGG | - | chr4.2:34683831-34683850 | None:intergenic | 45.0% | |
ACTACCGGTGATGCTATTGT+TGG | + | chr4.2:34684051-34684070 | MS.gene90969:CDS | 45.0% | |
ATTATACGGCCCATCCACAA+AGG | - | chr4.2:34683899-34683918 | None:intergenic | 45.0% | |
GATCCAAAATCCAAGCTCGT+GGG | + | chr4.2:34683805-34683824 | MS.gene90969:CDS | 45.0% | |
GGTAGCACATTTGCTCTTGT+TGG | + | chr4.2:34683919-34683938 | MS.gene90969:CDS | 45.0% | |
GTAGCCAACAATAGCATCAC+CGG | - | chr4.2:34684058-34684077 | None:intergenic | 45.0% | |
TGAGCTACTCCTTTGTGGAT+GGG | + | chr4.2:34683887-34683906 | MS.gene90969:CDS | 45.0% | |
TGATCCAAAATCCAAGCTCG+TGG | + | chr4.2:34683804-34683823 | MS.gene90969:CDS | 45.0% | |
TTGAGCTACTCCTTTGTGGA+TGG | + | chr4.2:34683886-34683905 | MS.gene90969:CDS | 45.0% | |
TTTGTGGATGGGCCGTATAA+TGG | + | chr4.2:34683898-34683917 | MS.gene90969:CDS | 45.0% | |
ACAACAGGCATCTCACGAAC+CGG | - | chr4.2:34683964-34683983 | None:intergenic | 50.0% | |
CATCGTGTCAGCAGGAGATT+GGG | + | chr4.2:34683851-34683870 | MS.gene90969:CDS | 50.0% | |
GTCGTTGAGCTACTCCTTTG+TGG | + | chr4.2:34683882-34683901 | MS.gene90969:CDS | 50.0% | |
GTTCGTGAGATGCCTGTTGT+TGG | + | chr4.2:34683964-34683983 | MS.gene90969:CDS | 50.0% | |
TCATCGTGTCAGCAGGAGAT+TGG | + | chr4.2:34683850-34683869 | MS.gene90969:CDS | 50.0% | |
! | TGGGCTTTTCCGTATGGCAA+GGG | + | chr4.2:34683993-34684012 | MS.gene90969:CDS | 50.0% |
!! | ATGCCTGTTGTTGGTGGTAC+TGG | + | chr4.2:34683973-34683992 | MS.gene90969:CDS | 50.0% |
!! | TGCCTGTTGTTGGTGGTACT+GGG | + | chr4.2:34683974-34683993 | MS.gene90969:CDS | 50.0% |
!! | TGGTACTGGGCTTTTCCGTA+TGG | + | chr4.2:34683987-34684006 | MS.gene90969:CDS | 50.0% |
AAACCCAAGCGCGATCAAGG+TGG | + | chr4.2:34683699-34683718 | MS.gene90969:CDS | 55.0% | |
AGCCCAGTACCACCAACAAC+AGG | - | chr4.2:34683979-34683998 | None:intergenic | 55.0% | |
CAACAGGCATCTCACGAACC+GGG | - | chr4.2:34683963-34683982 | None:intergenic | 55.0% | |
CACGAACCGGGTTCATAGCA+GGG | - | chr4.2:34683951-34683970 | None:intergenic | 55.0% | |
CGTGAGATGCCTGTTGTTGG+TGG | + | chr4.2:34683967-34683986 | MS.gene90969:CDS | 55.0% | |
TCACGAACCGGGTTCATAGC+AGG | - | chr4.2:34683952-34683971 | None:intergenic | 55.0% | |
TGGCATAGCCCCTTGCCATA+CGG | - | chr4.2:34684005-34684024 | None:intergenic | 55.0% | |
TTACGCGTCATCGTGTCAGC+AGG | + | chr4.2:34683843-34683862 | MS.gene90969:CDS | 55.0% | |
! | CTGGGCTTTTCCGTATGGCA+AGG | + | chr4.2:34683992-34684011 | MS.gene90969:CDS | 55.0% |
! | GGGCTTTTCCGTATGGCAAG+GGG | + | chr4.2:34683994-34684013 | MS.gene90969:CDS | 55.0% |
CAGCCACCTTGATCGCGCTT+GGG | - | chr4.2:34683705-34683724 | None:intergenic | 60.0% | |
TCAGCCACCTTGATCGCGCT+TGG | - | chr4.2:34683706-34683725 | None:intergenic | 60.0% | |
! | CGGCCCACGAGCTTGGATTT+TGG | - | chr4.2:34683811-34683830 | None:intergenic | 60.0% |
AAGCTCGTGGGCCGAGCACA+AGG | + | chr4.2:34683817-34683836 | MS.gene90969:CDS | 65.0% | |
TTGTGCTCGGCCCACGAGCT+TGG | - | chr4.2:34683818-34683837 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 34683523 | 34684101 | 34683523 | ID=MS.gene90969 |
chr4.2 | mRNA | 34683523 | 34684101 | 34683523 | ID=MS.gene90969.t1;Parent=MS.gene90969 |
chr4.2 | exon | 34683523 | 34684101 | 34683523 | ID=MS.gene90969.t1.exon1;Parent=MS.gene90969.t1 |
chr4.2 | CDS | 34683523 | 34684101 | 34683523 | ID=cds.MS.gene90969.t1;Parent=MS.gene90969.t1 |
Gene Sequence |
Protein sequence |