Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46990.t1 | XP_013459242.1 | 99 | 720 | 7 | 0 | 1 | 720 | 1 | 720 | 1.10E-300 | 1042.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46990.t1 | Q08C72 | 60.9 | 530 | 201 | 1 | 197 | 720 | 220 | 749 | 8.1e-172 | 605.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46990.t1 | A0A072UW40 | 99.0 | 720 | 7 | 0 | 1 | 720 | 1 | 720 | 7.8e-301 | 1042.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049411 | MS.gene46990 | 0.860822 | 1.58E-63 | -1.69E-46 |
| MS.gene050985 | MS.gene46990 | 0.832264 | 1.04E-55 | -1.69E-46 |
| MS.gene051716 | MS.gene46990 | 0.818609 | 1.79E-52 | -1.69E-46 |
| MS.gene054004 | MS.gene46990 | 0.800146 | 1.65E-48 | -1.69E-46 |
| MS.gene059802 | MS.gene46990 | 0.867685 | 1.14E-65 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene46990 | MS.gene53517 | PPI |
| MS.gene46990 | MS.gene022597 | PPI |
| MS.gene46990 | MS.gene073888 | PPI |
| MS.gene46990 | MS.gene053443 | PPI |
| MS.gene46990 | MS.gene01351 | PPI |
| MS.gene46990 | MS.gene040615 | PPI |
| MS.gene46990 | MS.gene039147 | PPI |
| MS.gene46990 | MS.gene002376 | PPI |
| MS.gene46990 | MS.gene047509 | PPI |
| MS.gene063407 | MS.gene46990 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46990.t1 | MTR_3g434840 | 98.564 | 766 | 11 | 0 | 1 | 766 | 1 | 766 | 0.0 | 1535 |
| MS.gene46990.t1 | MTR_7g093510 | 71.946 | 442 | 116 | 5 | 277 | 715 | 1 | 437 | 0.0 | 655 |
| MS.gene46990.t1 | MTR_7g093340 | 75.115 | 217 | 53 | 1 | 500 | 715 | 7 | 223 | 2.38e-116 | 351 |
| MS.gene46990.t1 | MTR_5g034040 | 62.667 | 75 | 4 | 2 | 529 | 603 | 1 | 51 | 2.84e-21 | 90.5 |
| MS.gene46990.t1 | MTR_7g086290 | 26.946 | 167 | 120 | 2 | 493 | 658 | 444 | 609 | 2.64e-15 | 80.5 |
| MS.gene46990.t1 | MTR_7g086290 | 29.496 | 139 | 97 | 1 | 521 | 658 | 586 | 724 | 2.81e-15 | 80.5 |
| MS.gene46990.t1 | MTR_7g086290 | 29.496 | 139 | 97 | 1 | 521 | 658 | 587 | 725 | 2.84e-15 | 80.5 |
| MS.gene46990.t1 | MTR_5g096330 | 43.878 | 98 | 35 | 3 | 457 | 554 | 16 | 93 | 4.76e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46990.t1 | AT1G80930 | 71.875 | 704 | 166 | 11 | 36 | 727 | 174 | 857 | 0.0 | 974 |
| MS.gene46990.t1 | AT1G52325 | 59.756 | 82 | 33 | 0 | 631 | 712 | 39 | 120 | 1.11e-25 | 103 |
| MS.gene46990.t1 | AT1G52325 | 72.727 | 44 | 12 | 0 | 529 | 572 | 1 | 44 | 1.05e-15 | 75.5 |
| MS.gene46990.t1 | AT5G17930 | 21.850 | 508 | 313 | 14 | 233 | 713 | 301 | 751 | 2.08e-17 | 87.4 |
Find 184 sgRNAs with CRISPR-Local
Find 447 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTGACTTGGGATGCTTTA+AGG | 0.176862 | 3.1:+31319363 | MS.gene46990:CDS |
| CATAAGAAAGGCAAAGTTTC+AGG | 0.186876 | 3.1:+31321054 | MS.gene46990:CDS |
| CTTCACCACCACGATGTTTC+CGG | 0.221761 | 3.1:-31318788 | None:intergenic |
| CTCAGATATTACGGTCTTCT+AGG | 0.222902 | 3.1:+31322042 | MS.gene46990:CDS |
| CTGAAACTTTGCCTTTCTTA+TGG | 0.257364 | 3.1:-31321053 | None:intergenic |
| AGGAAGAAGTTGATCGAAAA+AGG | 0.273803 | 3.1:+31318817 | MS.gene46990:CDS |
| ATTTATTAAGATTCTCTTCC+AGG | 0.277884 | 3.1:+31322275 | MS.gene46990:CDS |
| GGATAACCGTCGAAGGTATA+AGG | 0.286872 | 3.1:+31318857 | MS.gene46990:CDS |
| GCTTTAAGGAAGAGTATTAA+TGG | 0.296789 | 3.1:+31319377 | MS.gene46990:CDS |
| AGATCGGCGTCGTCGATATA+AGG | 0.303241 | 3.1:+31318977 | MS.gene46990:CDS |
| AAAGGAGGCATATAGTTGAT+AGG | 0.304191 | 3.1:+31319045 | MS.gene46990:CDS |
| ATATGATAAGAAGAGGAATT+TGG | 0.304825 | 3.1:+31319016 | MS.gene46990:CDS |
| AACGTGATGTGAAGAGAATT+AGG | 0.329271 | 3.1:+31318895 | MS.gene46990:CDS |
| CGTGTTCAATTTCTAATTGA+AGG | 0.334557 | 3.1:+31321022 | MS.gene46990:CDS |
| AATGGCGATGCATCTAAGTT+AGG | 0.346040 | 3.1:+31319254 | MS.gene46990:CDS |
| CAAACCCGACCCCAATTATC+TGG | 0.347857 | 3.1:+31321602 | MS.gene46990:CDS |
| TATTAATGGATTGGTGAATA+AGG | 0.348278 | 3.1:+31319391 | MS.gene46990:CDS |
| CTCTCACCGAGAGGACTTCA+TGG | 0.369360 | 3.1:+31319912 | MS.gene46990:CDS |
| AAAGAAGGCATAGGGCTGAT+AGG | 0.374529 | 3.1:+31318925 | MS.gene46990:CDS |
| GATGGCGTCACCCGGGTTTA+CGG | 0.376345 | 3.1:+31319511 | MS.gene46990:CDS |
| TTCACATCCATTGGTCTTGG+TGG | 0.379622 | 3.1:+31324287 | MS.gene46990:CDS |
| AAGAAGAAAGAGGAAGGAAG+TGG | 0.385688 | 3.1:+31319197 | MS.gene46990:CDS |
| ATACCGGCAAGTGTGATAAA+TGG | 0.389347 | 3.1:+31319236 | MS.gene46990:CDS |
| ATCATCCTCGCTAACTTAAA+CGG | 0.399524 | 3.1:-31319302 | None:intergenic |
| GGCATAGGGCTGATAGGGTT+AGG | 0.401872 | 3.1:+31318931 | MS.gene46990:CDS |
| GACGAACTGCCCTTCTTCCT+CGG | 0.406324 | 3.1:-31318712 | None:intergenic |
| GAGAATTTGATTCGTGGAAG+AGG | 0.407751 | 3.1:+31319458 | MS.gene46990:CDS |
| AGAAGGACAGGAAGAGAGAA+AGG | 0.408044 | 3.1:+31319087 | MS.gene46990:CDS |
| TCGCCATTTATCACACTTGC+CGG | 0.408536 | 3.1:-31319239 | None:intergenic |
| AAGCTCCGATTCATCAGATT+CGG | 0.416241 | 3.1:+31324409 | MS.gene46990:CDS |
| TTAACCTCTCATTTAGCAAC+CGG | 0.416989 | 3.1:-31324184 | None:intergenic |
| TGTTGTTGCATGATCATCCT+TGG | 0.421914 | 3.1:-31324347 | None:intergenic |
| TACAGGGTTATCCAGCTGTT+CGG | 0.427354 | 3.1:+31321384 | MS.gene46990:intron |
| ACGTGATGTGAAGAGAATTA+GGG | 0.427846 | 3.1:+31318896 | MS.gene46990:CDS |
| AGAACTTATCTCAGATATTA+CGG | 0.428108 | 3.1:+31322033 | MS.gene46990:CDS |
| AAGGAAGAGTATTAATGGAT+TGG | 0.432567 | 3.1:+31319382 | MS.gene46990:CDS |
| AGGATTATTTGCCATAAGAA+AGG | 0.434562 | 3.1:+31321042 | MS.gene46990:CDS |
| TCGTGGTGGTGAAGATTTAG+AGG | 0.435202 | 3.1:+31318797 | MS.gene46990:CDS |
| ATAGGAGGAATGGGGAGAGA+AGG | 0.436272 | 3.1:+31319129 | MS.gene46990:CDS |
| TAGGAGGAATGGGGAGAGAA+GGG | 0.439511 | 3.1:+31319130 | MS.gene46990:CDS |
| GGAAGGCTCGGATGCTGAAT+CGG | 0.445016 | 3.1:+31321692 | MS.gene46990:CDS |
| TCAAGTTCAGGCCGAACAGC+TGG | 0.448583 | 3.1:-31321395 | None:intergenic |
| AGCTCCGATTCATCAGATTC+GGG | 0.454738 | 3.1:+31324410 | MS.gene46990:CDS |
| AGCAAATACATCCGTAAACC+CGG | 0.455143 | 3.1:-31319522 | None:intergenic |
| AGCTTCCTCATTCTCTTCAT+CGG | 0.455297 | 3.1:-31321730 | None:intergenic |
| GGAAGAGGAATCAGAGGGAG+AGG | 0.455771 | 3.1:+31321671 | MS.gene46990:CDS |
| AAATTCTCCGCAAACAACTC+TGG | 0.461084 | 3.1:-31319443 | None:intergenic |
| ATGTGAAGAGAATTAGGGAT+AGG | 0.462288 | 3.1:+31318901 | MS.gene46990:CDS |
| TGCTCCACGAGGTCAAGTTC+AGG | 0.464216 | 3.1:-31321407 | None:intergenic |
| TGTGAAGTTTGTAGCACATC+TGG | 0.464680 | 3.1:+31319761 | MS.gene46990:CDS |
| ATGACGATGATAGGAGGAAT+GGG | 0.465728 | 3.1:+31319120 | MS.gene46990:CDS |
| ATGGCGATGCATCTAAGTTA+GGG | 0.468521 | 3.1:+31319255 | MS.gene46990:CDS |
| TTCTCCAGATAATTGGGGTC+GGG | 0.471760 | 3.1:-31321606 | None:intergenic |
| AACACGAAGTTTCCTCAAGT+TGG | 0.480942 | 3.1:+31319563 | MS.gene46990:CDS |
| GAAAGTAAGAAGAAAGAGGA+AGG | 0.481288 | 3.1:+31319191 | MS.gene46990:CDS |
| TGAACTTGACCTCGTGGAGC+AGG | 0.481515 | 3.1:+31321409 | MS.gene46990:CDS |
| GGTTCCCGAATCTGATGAAT+CGG | 0.481563 | 3.1:-31324414 | None:intergenic |
| GAGAGCGAGGACGGTGATAC+CGG | 0.485924 | 3.1:+31319220 | MS.gene46990:CDS |
| GATAACCGTCGAAGGTATAA+GGG | 0.486725 | 3.1:+31318858 | MS.gene46990:CDS |
| CGGAGTATCAGAGGTTGACT+TGG | 0.488147 | 3.1:+31319351 | MS.gene46990:CDS |
| ACTTGACTCTGACTCAGAAC+TGG | 0.488401 | 3.1:-31324435 | None:intergenic |
| AAGCTTGCTGGGTGAGGAAG+AGG | 0.489089 | 3.1:+31321656 | MS.gene46990:CDS |
| GGAAGAAAGTAAGAAGAAAG+AGG | 0.490672 | 3.1:+31319187 | MS.gene46990:CDS |
| ATAAGAAGAGGAATTTGGAT+AGG | 0.490938 | 3.1:+31319021 | MS.gene46990:CDS |
| AGAAGAAAGAGGAAGGAAGT+GGG | 0.491186 | 3.1:+31319198 | MS.gene46990:CDS |
| AAGGAGGCATATAGTTGATA+GGG | 0.494273 | 3.1:+31319046 | MS.gene46990:CDS |
| ATCGACGCGATGACGATGAT+AGG | 0.494629 | 3.1:+31319111 | MS.gene46990:CDS |
| AAGTCGTGTCGTCCTCAGTC+AGG | 0.494714 | 3.1:-31322239 | None:intergenic |
| ATCTGAGATAAGTTCTCTCC+TGG | 0.500569 | 3.1:-31322026 | None:intergenic |
| CAGGAATTGTCAGAGCATCT+AGG | 0.500837 | 3.1:+31324158 | MS.gene46990:intron |
| CCTCTTGACCTGGCTCAAGA+TGG | 0.500906 | 3.1:-31321866 | None:intergenic |
| AAAGGAATAGGGATAGGGAT+AGG | 0.501070 | 3.1:+31318835 | MS.gene46990:CDS |
| CCTCATCCAAGGAGACTTCG+TGG | 0.501456 | 3.1:-31321445 | None:intergenic |
| GATAACCCACGAAGTCTCCT+TGG | 0.501647 | 3.1:+31321439 | MS.gene46990:CDS |
| AGTGAATCGTCCGAGGAAGA+AGG | 0.504113 | 3.1:+31318702 | MS.gene46990:CDS |
| TCAAAAGAATCCTGCATGGT+TGG | 0.504273 | 3.1:-31324212 | None:intergenic |
| TAGGGATAATGATAATGATA+AGG | 0.505045 | 3.1:+31318950 | MS.gene46990:CDS |
| TCAGATATTACGGTCTTCTA+GGG | 0.505318 | 3.1:+31322043 | MS.gene46990:CDS |
| TACGGATGTATTTGCTGCGA+TGG | 0.513062 | 3.1:+31319529 | MS.gene46990:CDS |
| ATTTATTTGTTTCGAGCCTG+TGG | 0.514254 | 3.1:-31322140 | None:intergenic |
| AGGGATAGAGTTGAAAAGAA+TGG | 0.514880 | 3.1:+31319149 | MS.gene46990:CDS |
| TATAATTCCAGAGTTGTTTG+CGG | 0.515637 | 3.1:+31319436 | MS.gene46990:CDS |
| AGCAGTATTCATTGATCCAC+AGG | 0.516452 | 3.1:+31322124 | MS.gene46990:CDS |
| AAGAAGGCATAGGGCTGATA+GGG | 0.519755 | 3.1:+31318926 | MS.gene46990:CDS |
| ATCAGAGGGAGAGGAAGGCT+CGG | 0.519884 | 3.1:+31321680 | MS.gene46990:CDS |
| ATAATGATAATGAGAAGGAC+AGG | 0.525843 | 3.1:+31319075 | MS.gene46990:CDS |
| GATGACGATGATAGGAGGAA+TGG | 0.527318 | 3.1:+31319119 | MS.gene46990:CDS |
| TAAGTTAGCGAGGATGATGA+AGG | 0.527435 | 3.1:+31319307 | MS.gene46990:CDS |
| AAGTCACAGATGGCGTCACC+CGG | 0.527531 | 3.1:+31319503 | MS.gene46990:CDS |
| AACTCACCATGAAGTCCTCT+CGG | 0.527918 | 3.1:-31319918 | None:intergenic |
| AGGAAGTGGGAGAGCGAGGA+CGG | 0.530179 | 3.1:+31319211 | MS.gene46990:CDS |
| CAAGTCAACCTCTGATACTC+CGG | 0.530824 | 3.1:-31319350 | None:intergenic |
| GGGTGAGGAAGAGGAATCAG+AGG | 0.530871 | 3.1:+31321665 | MS.gene46990:CDS |
| GAGGAATCAGAGGGAGAGGA+AGG | 0.532139 | 3.1:+31321675 | MS.gene46990:CDS |
| CTAGAGATGGGTAGAGGCGA+AGG | 0.532669 | 3.1:+31318678 | None:intergenic |
| AGGAAGGAAGTGGGAGAGCG+AGG | 0.533639 | 3.1:+31319207 | MS.gene46990:CDS |
| AATGTACCAAGGGAAGTCTC+AGG | 0.534127 | 3.1:-31321476 | None:intergenic |
| GAATTAGGGATAGGGAAAGA+AGG | 0.534748 | 3.1:+31318910 | MS.gene46990:CDS |
| AGCCACTTCAACACTGTCAT+CGG | 0.534953 | 3.1:-31319850 | None:intergenic |
| AAGGAATAGGGATAGGGATA+GGG | 0.535428 | 3.1:+31318836 | MS.gene46990:CDS |
| GCATCTAAGTTAGGGAAAAG+TGG | 0.535960 | 3.1:+31319263 | MS.gene46990:CDS |
| ATTCTCCAGATAATTGGGGT+CGG | 0.536893 | 3.1:-31321607 | None:intergenic |
| AGAGGAATTTGGATAGGGAA+AGG | 0.536981 | 3.1:+31319027 | MS.gene46990:CDS |
| CTTCTTATCATATTCCTCAT+CGG | 0.539763 | 3.1:-31319006 | None:intergenic |
| TGTCAGAGCATCTAGGCATC+CGG | 0.540897 | 3.1:+31324165 | MS.gene46990:CDS |
| AGTTGACGATAAGAGTAGTC+CGG | 0.544129 | 3.1:+31319331 | MS.gene46990:CDS |
| AGAATTTGATTCGTGGAAGA+GGG | 0.547231 | 3.1:+31319459 | MS.gene46990:CDS |
| AACAAATAAATTGAGAAATG+TGG | 0.548686 | 3.1:+31322152 | MS.gene46990:CDS |
| TGTGAAGAGAATTAGGGATA+GGG | 0.548968 | 3.1:+31318902 | MS.gene46990:CDS |
| TTTCGTGGAATTCTGCATGA+AGG | 0.549789 | 3.1:+31320986 | MS.gene46990:CDS |
| AGAGTTGAAGAAAAGCTTGC+TGG | 0.550608 | 3.1:+31321644 | MS.gene46990:CDS |
| TAAGAAGAGGAATTTGGATA+GGG | 0.551290 | 3.1:+31319022 | MS.gene46990:CDS |
| GCATAGGGCTGATAGGGTTA+GGG | 0.554442 | 3.1:+31318932 | MS.gene46990:CDS |
| AGAATGTGGCTCAATGCTGC+AGG | 0.558595 | 3.1:+31319887 | MS.gene46990:CDS |
| TTCACAGCAGCAAGTAATTG+AGG | 0.561550 | 3.1:-31319744 | None:intergenic |
| ATCCTCGCTAACTTAAACGG+CGG | 0.561726 | 3.1:-31319299 | None:intergenic |
| GAAGAAAAGCTTGCTGGGTG+AGG | 0.564485 | 3.1:+31321650 | MS.gene46990:CDS |
| GTTAAATGATCCAACCATGC+AGG | 0.568417 | 3.1:+31324202 | MS.gene46990:CDS |
| GACAGTGTTGAAGTGGCTGT+TGG | 0.568452 | 3.1:+31319855 | MS.gene46990:CDS |
| ATAGATCCTGAGACTTCCCT+TGG | 0.569265 | 3.1:+31321470 | MS.gene46990:CDS |
| GTGAATCGTCCGAGGAAGAA+GGG | 0.570148 | 3.1:+31318703 | MS.gene46990:CDS |
| TTTGCGGAGAATTTGATTCG+TGG | 0.570272 | 3.1:+31319452 | MS.gene46990:CDS |
| AGAGTAGTCCGGAGTATCAG+AGG | 0.573006 | 3.1:+31319342 | MS.gene46990:CDS |
| AGGATCTATTTCCTCATCCA+AGG | 0.574152 | 3.1:-31321456 | None:intergenic |
| TGAATCCGATGAAGAGAATG+AGG | 0.575070 | 3.1:+31321725 | MS.gene46990:CDS |
| CTCATCCAAGGAGACTTCGT+GGG | 0.575131 | 3.1:-31321444 | None:intergenic |
| GCTTCTCGAATGTTGCAGCC+AGG | 0.578281 | 3.1:+31322008 | MS.gene46990:CDS |
| ATGAGGAATATGATAAGAAG+AGG | 0.579090 | 3.1:+31319009 | MS.gene46990:CDS |
| CCACGAAGTCTCCTTGGATG+AGG | 0.579818 | 3.1:+31321445 | MS.gene46990:CDS |
| CAAACCCTAGAGATGGGTAG+AGG | 0.584530 | 3.1:+31318672 | None:intergenic |
| TGCTTCCTCAAAATCTACAC+TGG | 0.585227 | 3.1:-31321823 | None:intergenic |
| TCAATGCTTACCTCTTGACC+TGG | 0.586308 | 3.1:-31321876 | None:intergenic |
| AGACCGCCGTGGAGCTGACG+TGG | 0.587724 | 3.1:+31318755 | MS.gene46990:CDS |
| ATAATGATAAGGAGAGAGAT+CGG | 0.588409 | 3.1:+31318961 | MS.gene46990:CDS |
| AAGAACCCTTATACCTTCGA+CGG | 0.588825 | 3.1:-31318863 | None:intergenic |
| CCATCTTGAGCCAGGTCAAG+AGG | 0.591466 | 3.1:+31321866 | MS.gene46990:CDS |
| TTTCATTCTCCAGATAATTG+GGG | 0.592695 | 3.1:-31321611 | None:intergenic |
| GGAATTTGGATAGGGAAAGG+AGG | 0.593854 | 3.1:+31319030 | MS.gene46990:CDS |
| AGAATGGTGGTGATAATGAG+AGG | 0.595271 | 3.1:+31319165 | MS.gene46990:CDS |
| AGTAAGACCACCAAGACCAA+TGG | 0.596030 | 3.1:-31324294 | None:intergenic |
| ATATATGATAAGACGTGCCA+AGG | 0.604106 | 3.1:-31322213 | None:intergenic |
| TTCCGATGACAGTGTTGAAG+TGG | 0.604254 | 3.1:+31319848 | MS.gene46990:CDS |
| CTAAGTTAGGGAAAAGTGGA+GGG | 0.605295 | 3.1:+31319267 | MS.gene46990:CDS |
| GGATAGGGAAAGAAGGCATA+GGG | 0.605833 | 3.1:+31318917 | MS.gene46990:CDS |
| GATCCTCCACGTCAGCTCCA+CGG | 0.609053 | 3.1:-31318761 | None:intergenic |
| GGGATAGGGAAAGAAGGCAT+AGG | 0.609566 | 3.1:+31318916 | MS.gene46990:CDS |
| TGATGATAATGATAATGAGA+AGG | 0.610107 | 3.1:+31319070 | MS.gene46990:CDS |
| TTCCGCCGTTTAAGTTAGCG+AGG | 0.612275 | 3.1:+31319297 | MS.gene46990:CDS |
| ATCATATATTCGCCTGACTG+AGG | 0.612797 | 3.1:+31322227 | MS.gene46990:CDS |
| GACGCGATGACGATGATAGG+AGG | 0.612992 | 3.1:+31319114 | MS.gene46990:CDS |
| AGTAAAAGATCACCAACTTG+AGG | 0.613759 | 3.1:-31319575 | None:intergenic |
| GAAGGACAGGAAGAGAGAAA+GGG | 0.616059 | 3.1:+31319088 | MS.gene46990:CDS |
| TAAGTTAGGGAAAAGTGGAG+GGG | 0.620618 | 3.1:+31319268 | MS.gene46990:CDS |
| CTGACGTGGAGGATCTTCGC+CGG | 0.621555 | 3.1:+31318769 | MS.gene46990:CDS |
| AGCGTATAAGCGTAATGACA+AGG | 0.625593 | 3.1:+31319625 | MS.gene46990:CDS |
| GATAGAGTTGAAAAGAATGG+TGG | 0.626095 | 3.1:+31319152 | MS.gene46990:CDS |
| GAGTTGAAGAAAAGCTTGCT+GGG | 0.627690 | 3.1:+31321645 | MS.gene46990:CDS |
| TCTAAGTTAGGGAAAAGTGG+AGG | 0.631512 | 3.1:+31319266 | MS.gene46990:CDS |
| GGAGTATCAGAGGTTGACTT+GGG | 0.634579 | 3.1:+31319352 | MS.gene46990:CDS |
| GAAGAGAAGCGAGACCGCCG+TGG | 0.638989 | 3.1:+31318744 | MS.gene46990:CDS |
| GCAAGTTTCAGATTCTGACT+CGG | 0.639505 | 3.1:+31324373 | MS.gene46990:CDS |
| ACTTCAACACTGTCATCGGA+AGG | 0.639702 | 3.1:-31319846 | None:intergenic |
| TCGGCCTGAACTTGACCTCG+TGG | 0.644434 | 3.1:+31321403 | MS.gene46990:CDS |
| CTAATCTTGTCAATCTGCGG+CGG | 0.648589 | 3.1:+31321778 | MS.gene46990:CDS |
| CGAAGGAAGTGAATCGTCCG+AGG | 0.649193 | 3.1:+31318695 | MS.gene46990:CDS |
| ATCGTGTATGAAGTCACAGA+TGG | 0.650101 | 3.1:+31319493 | MS.gene46990:CDS |
| GAATGGTGGTGATAATGAGA+GGG | 0.653081 | 3.1:+31319166 | MS.gene46990:CDS |
| GGTGAGGAAGAGGAATCAGA+GGG | 0.656246 | 3.1:+31321666 | MS.gene46990:CDS |
| AGACTAATCTTGTCAATCTG+CGG | 0.657517 | 3.1:+31321775 | MS.gene46990:CDS |
| GCAAATACATCCGTAAACCC+GGG | 0.659500 | 3.1:-31319521 | None:intergenic |
| AGTCACAGATGGCGTCACCC+GGG | 0.663171 | 3.1:+31319504 | MS.gene46990:CDS |
| GGGATAGGGATAACCGTCGA+AGG | 0.665076 | 3.1:+31318850 | MS.gene46990:CDS |
| AGGAAACTTCGTGTTAACAA+CGG | 0.666857 | 3.1:-31319555 | None:intergenic |
| CCGCCGTGGAGCTGACGTGG+AGG | 0.669781 | 3.1:+31318758 | MS.gene46990:CDS |
| GGATTCAAAAGAATCCTGCA+TGG | 0.674975 | 3.1:-31324216 | None:intergenic |
| TGACGATGATAGGAGGAATG+GGG | 0.674999 | 3.1:+31319121 | MS.gene46990:CDS |
| GCATCCGGTTGCTAAATGAG+AGG | 0.690045 | 3.1:+31324180 | MS.gene46990:CDS |
| ATATAAGGATGATTCCGATG+AGG | 0.702072 | 3.1:+31318992 | MS.gene46990:CDS |
| CTGCAGGATCTCTCACCGAG+AGG | 0.706164 | 3.1:+31319903 | MS.gene46990:CDS |
| TCTGATCTTCCTGCTCCACG+AGG | 0.706624 | 3.1:-31321418 | None:intergenic |
| TATCGCGCTAGAGCTGCTCA+CGG | 0.717493 | 3.1:+31319809 | MS.gene46990:CDS |
| GATCTTCGCCGGAAACATCG+TGG | 0.723457 | 3.1:+31318780 | MS.gene46990:CDS |
| CTTCGCCGGAAACATCGTGG+TGG | 0.733681 | 3.1:+31318783 | MS.gene46990:CDS |
| CCTCCACGTCAGCTCCACGG+CGG | 0.748184 | 3.1:-31318758 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAATTATATTAACATG+TGG | + | chr3.1:31321525-31321544 | MS.gene46990:intron | 10.0% |
| !! | TAAAAATATACGATATAAAA+TGG | - | chr3.1:31324032-31324051 | None:intergenic | 10.0% |
| !!! | ATTTTAATAAAATTCTGTTT+TGG | - | chr3.1:31321953-31321972 | None:intergenic | 10.0% |
| !! | AATATAACCATATAGTTAAA+GGG | - | chr3.1:31319946-31319965 | None:intergenic | 15.0% |
| !! | AATCATAATAAAATTTCTCT+CGG | - | chr3.1:31322506-31322525 | None:intergenic | 15.0% |
| !! | ATATAAAATGGAAATATCTT+GGG | - | chr3.1:31324020-31324039 | None:intergenic | 15.0% |
| !! | ATTGCTTAAAATTTGATAAA+AGG | + | chr3.1:31322392-31322411 | MS.gene46990:intron | 15.0% |
| !!! | AAAAGACATTTATTTTGAAA+TGG | - | chr3.1:31320212-31320231 | None:intergenic | 15.0% |
| !!! | AAATATTTTTCATGTTTTGA+TGG | - | chr3.1:31323070-31323089 | None:intergenic | 15.0% |
| !!! | ATATACAAGTTGTTTTATTA+TGG | + | chr3.1:31323133-31323152 | MS.gene46990:intron | 15.0% |
| !!! | TTCAAAATAAATGTCTTTTA+AGG | + | chr3.1:31320213-31320232 | MS.gene46990:intron | 15.0% |
| !!! | TTTATTATGATTTTTGACAA+AGG | + | chr3.1:31322514-31322533 | MS.gene46990:intron | 15.0% |
| !! | AACAAATAAATTGAGAAATG+TGG | + | chr3.1:31322152-31322171 | MS.gene46990:CDS | 20.0% |
| !! | ATCATAATAAAATTTCTCTC+GGG | - | chr3.1:31322505-31322524 | None:intergenic | 20.0% |
| !! | CAATATAACCATATAGTTAA+AGG | - | chr3.1:31319947-31319966 | None:intergenic | 20.0% |
| !! | CTACTAAAAAAAAAAACTCA+TGG | - | chr3.1:31323702-31323721 | None:intergenic | 20.0% |
| !! | GATATAAAATGGAAATATCT+TGG | - | chr3.1:31324021-31324040 | None:intergenic | 20.0% |
| !! | TAAGAATCTGAACAAAATTT+AGG | + | chr3.1:31322418-31322437 | MS.gene46990:intron | 20.0% |
| !! | TAATTTATATAATCTCGTGT+TGG | + | chr3.1:31320816-31320835 | MS.gene46990:intron | 20.0% |
| !! | TGAAATGTTAAATAGAAAGA+TGG | - | chr3.1:31322852-31322871 | None:intergenic | 20.0% |
| !! | TTATGAATCATACTATTCTT+TGG | + | chr3.1:31320041-31320060 | MS.gene46990:intron | 20.0% |
| !! | TTGTAAAGAAGAGAATATTA+TGG | - | chr3.1:31322914-31322933 | None:intergenic | 20.0% |
| !!! | AAAGATAGGTAAATGATTTT+TGG | + | chr3.1:31320090-31320109 | MS.gene46990:intron | 20.0% |
| !!! | AGTTAGATTTATAATTTTGC+AGG | + | chr3.1:31320950-31320969 | MS.gene46990:intron | 20.0% |
| !!! | GAGAAATTTTAAAAAAGGAT+GGG | - | chr3.1:31323490-31323509 | None:intergenic | 20.0% |
| !!! | GAGTGTTACTTTATAATAAT+AGG | + | chr3.1:31320568-31320587 | MS.gene46990:intron | 20.0% |
| !!! | TACCTTAATTTTTGGTAATT+TGG | + | chr3.1:31320686-31320705 | MS.gene46990:intron | 20.0% |
| !!! | TCTTTTGTATGGTATTTTAA+AGG | + | chr3.1:31321318-31321337 | MS.gene46990:intron | 20.0% |
| !!! | TGAAGTAAAAGTAATGTTTT+GGG | + | chr3.1:31320340-31320359 | MS.gene46990:intron | 20.0% |
| !!! | TGAGAAATTTTAAAAAAGGA+TGG | - | chr3.1:31323491-31323510 | None:intergenic | 20.0% |
| !!! | TTTCCAATTTTACTTTTAGT+CGG | + | chr3.1:31319673-31319692 | MS.gene46990:intron | 20.0% |
| ! | AAAAATTCCAAAGAAAAGAG+AGG | + | chr3.1:31322543-31322562 | MS.gene46990:intron | 25.0% |
| ! | AAAACATGGTAAAGAAAGAT+AGG | + | chr3.1:31320076-31320095 | MS.gene46990:intron | 25.0% |
| ! | AAACCGACTAAAAGTAAAAT+TGG | - | chr3.1:31319679-31319698 | None:intergenic | 25.0% |
| ! | AAATGCAATGATTAGAAGAA+AGG | + | chr3.1:31320255-31320274 | MS.gene46990:intron | 25.0% |
| ! | AATGCAATGATTAGAAGAAA+GGG | + | chr3.1:31320256-31320275 | MS.gene46990:intron | 25.0% |
| ! | ACCAAATAAAAACAACAGTT+TGG | - | chr3.1:31322453-31322472 | None:intergenic | 25.0% |
| ! | AGAACTTATCTCAGATATTA+CGG | + | chr3.1:31322033-31322052 | MS.gene46990:CDS | 25.0% |
| ! | AGGTGTGATTAATATTTCAT+TGG | + | chr3.1:31320391-31320410 | MS.gene46990:intron | 25.0% |
| ! | AGTATTTGAAAAATATGCCA+AGG | + | chr3.1:31324330-31324349 | MS.gene46990:CDS | 25.0% |
| ! | ATAACATAATTTCATGCACA+TGG | - | chr3.1:31320182-31320201 | None:intergenic | 25.0% |
| ! | ATATGATAAGAAGAGGAATT+TGG | + | chr3.1:31319016-31319035 | MS.gene46990:CDS | 25.0% |
| ! | ATTTATTAAGATTCTCTTCC+AGG | + | chr3.1:31322275-31322294 | MS.gene46990:CDS | 25.0% |
| ! | CACCAAATTACCAAAAATTA+AGG | - | chr3.1:31320691-31320710 | None:intergenic | 25.0% |
| ! | CTATTACTGTTGTTAAGAAT+TGG | - | chr3.1:31322708-31322727 | None:intergenic | 25.0% |
| ! | GAAAATAGAAAATGTACCAA+GGG | - | chr3.1:31321489-31321508 | None:intergenic | 25.0% |
| ! | TAAAGAAACCAATAGTTGAT+GGG | - | chr3.1:31320305-31320324 | None:intergenic | 25.0% |
| ! | TAAAGAAGAGAATATTATGG+TGG | - | chr3.1:31322911-31322930 | None:intergenic | 25.0% |
| ! | TAACATAATTTCATGCACAT+GGG | - | chr3.1:31320181-31320200 | None:intergenic | 25.0% |
| ! | TGAAAATAGAAAATGTACCA+AGG | - | chr3.1:31321490-31321509 | None:intergenic | 25.0% |
| !! | AACTTCTGTACCTTAATTTT+TGG | + | chr3.1:31320678-31320697 | MS.gene46990:intron | 25.0% |
| !! | AAGCATAAGTGAAAAAGTAT+AGG | - | chr3.1:31322736-31322755 | None:intergenic | 25.0% |
| !! | AGGTACACTATTTTATTGTT+TGG | + | chr3.1:31321074-31321093 | MS.gene46990:intron | 25.0% |
| !! | GCATCTTAACAATTTTATTC+AGG | + | chr3.1:31323551-31323570 | MS.gene46990:intron | 25.0% |
| !! | GGTACACTATTTTATTGTTT+GGG | + | chr3.1:31321075-31321094 | MS.gene46990:intron | 25.0% |
| !! | GTACACTATTTTATTGTTTG+GGG | + | chr3.1:31321076-31321095 | MS.gene46990:intron | 25.0% |
| !! | GTGAAGTAAAAGTAATGTTT+TGG | + | chr3.1:31320339-31320358 | MS.gene46990:intron | 25.0% |
| !! | TAGGGATAATGATAATGATA+AGG | + | chr3.1:31318950-31318969 | MS.gene46990:CDS | 25.0% |
| !! | TGATGATAATGATAATGAGA+AGG | + | chr3.1:31319070-31319089 | MS.gene46990:CDS | 25.0% |
| !! | TTTTCATTCTCCAGATAATT+GGG | - | chr3.1:31321615-31321634 | None:intergenic | 25.0% |
| !!! | AAATTTTTTGCTCATTTGCT+CGG | + | chr3.1:31322177-31322196 | MS.gene46990:CDS | 25.0% |
| !!! | AGACATTTATTTTGAAATGG+AGG | - | chr3.1:31320209-31320228 | None:intergenic | 25.0% |
| !!! | ATCAATTTTTTCACATCCAT+TGG | + | chr3.1:31324278-31324297 | MS.gene46990:CDS | 25.0% |
| !!! | CTTTTAGTCGGTTTTTAATT+TGG | + | chr3.1:31319685-31319704 | MS.gene46990:intron | 25.0% |
| !!! | GAATATGTGCTTTTAAAACT+TGG | - | chr3.1:31322369-31322388 | None:intergenic | 25.0% |
| !!! | GACATTTATTTTGAAATGGA+GGG | - | chr3.1:31320208-31320227 | None:intergenic | 25.0% |
| !!! | TATTAATGGATTGGTGAATA+AGG | + | chr3.1:31319391-31319410 | MS.gene46990:CDS | 25.0% |
| !!! | TATTTGGTTTTTTGTATGCT+AGG | + | chr3.1:31322465-31322484 | MS.gene46990:intron | 25.0% |
| !!! | TCCAAACTGTTGTTTTTATT+TGG | + | chr3.1:31322449-31322468 | MS.gene46990:intron | 25.0% |
| !!! | TGGGTGAGAAATTTTAAAAA+AGG | - | chr3.1:31323495-31323514 | None:intergenic | 25.0% |
| AAAATACTTCCTTGAGAGAT+GGG | - | chr3.1:31323514-31323533 | None:intergenic | 30.0% | |
| AAATTATCCCCATCAACTAT+TGG | + | chr3.1:31320294-31320313 | MS.gene46990:intron | 30.0% | |
| ACGGTATAGTTGTATACTAA+TGG | + | chr3.1:31322997-31323016 | MS.gene46990:intron | 30.0% | |
| AGGATTATTTGCCATAAGAA+AGG | + | chr3.1:31321042-31321061 | MS.gene46990:CDS | 30.0% | |
| AGTTGATCGAAAAAGGAATA+GGG | + | chr3.1:31318824-31318843 | MS.gene46990:CDS | 30.0% | |
| ATAAGAAGAGGAATTTGGAT+AGG | + | chr3.1:31319021-31319040 | MS.gene46990:CDS | 30.0% | |
| ATAATGATAAGGAGAGAGAT+CGG | + | chr3.1:31318961-31318980 | MS.gene46990:CDS | 30.0% | |
| ATGAGGAATATGATAAGAAG+AGG | + | chr3.1:31319009-31319028 | MS.gene46990:CDS | 30.0% | |
| ATGTTGCATGAATATATTGG+TGG | + | chr3.1:31323967-31323986 | MS.gene46990:intron | 30.0% | |
| ATTGAAAACTAGAGTAATGG+AGG | - | chr3.1:31323356-31323375 | None:intergenic | 30.0% | |
| CAAAATACAGACAAGAGAAA+GGG | - | chr3.1:31320007-31320026 | None:intergenic | 30.0% | |
| CATTGAGCTAACATTCTTAT+TGG | + | chr3.1:31322934-31322953 | MS.gene46990:intron | 30.0% | |
| CGTGTTCAATTTCTAATTGA+AGG | + | chr3.1:31321022-31321041 | MS.gene46990:CDS | 30.0% | |
| CTTCTTATCATATTCCTCAT+CGG | - | chr3.1:31319009-31319028 | None:intergenic | 30.0% | |
| GATAAAAGCAATAAAAACCC+AGG | - | chr3.1:31322796-31322815 | None:intergenic | 30.0% | |
| GTAAAGAAACCAATAGTTGA+TGG | - | chr3.1:31320306-31320325 | None:intergenic | 30.0% | |
| GTATGCATAAATTTGTACAG+AGG | - | chr3.1:31320846-31320865 | None:intergenic | 30.0% | |
| GTTATATCACTATTGCATAG+CGG | + | chr3.1:31321232-31321251 | MS.gene46990:intron | 30.0% | |
| TAAGAAGAGGAATTTGGATA+GGG | + | chr3.1:31319022-31319041 | MS.gene46990:CDS | 30.0% | |
| TATAATTCCAGAGTTGTTTG+CGG | + | chr3.1:31319436-31319455 | MS.gene46990:CDS | 30.0% | |
| TATCATGACAACTGCAAAAA+TGG | - | chr3.1:31320760-31320779 | None:intergenic | 30.0% | |
| TCAAAATACAGACAAGAGAA+AGG | - | chr3.1:31320008-31320027 | None:intergenic | 30.0% | |
| TCTTAACAACAGTAATAGCT+TGG | + | chr3.1:31322710-31322729 | MS.gene46990:intron | 30.0% | |
| TGCATGTTGCATGAATATAT+TGG | + | chr3.1:31323964-31323983 | MS.gene46990:intron | 30.0% | |
| TGTTCTCTTATATCATGTGT+GGG | + | chr3.1:31324058-31324077 | MS.gene46990:intron | 30.0% | |
| TTCAAATCAAATGGACGAAA+TGG | - | chr3.1:31323197-31323216 | None:intergenic | 30.0% | |
| TTGTTCTCTTATATCATGTG+TGG | + | chr3.1:31324057-31324076 | MS.gene46990:intron | 30.0% | |
| TTTCATTCTCCAGATAATTG+GGG | - | chr3.1:31321614-31321633 | None:intergenic | 30.0% | |
| TTTGGGAGTAGTGTATATAA+GGG | + | chr3.1:31320357-31320376 | MS.gene46990:intron | 30.0% | |
| ! | AAAGAAACCAATAGTTGATG+GGG | - | chr3.1:31320304-31320323 | None:intergenic | 30.0% |
| ! | AAAGTAAGTTTTTCCAACAG+GGG | + | chr3.1:31320715-31320734 | MS.gene46990:intron | 30.0% |
| ! | AAGTTGATCGAAAAAGGAAT+AGG | + | chr3.1:31318823-31318842 | MS.gene46990:CDS | 30.0% |
| ! | ACAGAATCAGTGTTGTTAAA+TGG | + | chr3.1:31321123-31321142 | MS.gene46990:intron | 30.0% |
| ! | ACATTGTCAACTCTTTTGTA+TGG | + | chr3.1:31321307-31321326 | MS.gene46990:intron | 30.0% |
| ! | AGAAAGTAAGTTTTTCCAAC+AGG | + | chr3.1:31320713-31320732 | MS.gene46990:intron | 30.0% |
| ! | AGTGTATATAAGGGTATAAC+TGG | + | chr3.1:31320366-31320385 | MS.gene46990:intron | 30.0% |
| ! | ATAATGATAATGAGAAGGAC+AGG | + | chr3.1:31319075-31319094 | MS.gene46990:CDS | 30.0% |
| ! | ATATAAGGGTATAACTGGAA+AGG | + | chr3.1:31320371-31320390 | MS.gene46990:intron | 30.0% |
| ! | CTTTTCATTCTCCAGATAAT+TGG | - | chr3.1:31321616-31321635 | None:intergenic | 30.0% |
| ! | GAAAGTAAGTTTTTCCAACA+GGG | + | chr3.1:31320714-31320733 | MS.gene46990:intron | 30.0% |
| ! | GAGTTTTACTGGTGAAAAAA+AGG | - | chr3.1:31323791-31323810 | None:intergenic | 30.0% |
| ! | GAGTTTTCCCTTTAACTATA+TGG | + | chr3.1:31319936-31319955 | MS.gene46990:intron | 30.0% |
| ! | GCATCATTTTCACAAATACA+CGG | - | chr3.1:31320896-31320915 | None:intergenic | 30.0% |
| ! | GTCATGATATGTTTAGAACT+GGG | + | chr3.1:31320771-31320790 | MS.gene46990:intron | 30.0% |
| ! | TAGTAGACCAAATGTTTTTC+TGG | + | chr3.1:31323716-31323735 | MS.gene46990:intron | 30.0% |
| ! | TGTCATGATATGTTTAGAAC+TGG | + | chr3.1:31320770-31320789 | MS.gene46990:intron | 30.0% |
| ! | TTTATTATCAGACTAGCCAA+TGG | + | chr3.1:31323022-31323041 | MS.gene46990:intron | 30.0% |
| !! | AAGGAAGAGTATTAATGGAT+TGG | + | chr3.1:31319382-31319401 | MS.gene46990:CDS | 30.0% |
| !! | AATAGTTGATGGGGATAATT+TGG | - | chr3.1:31320295-31320314 | None:intergenic | 30.0% |
| !! | ACACTCATTTTGAAAACAGA+GGG | + | chr3.1:31320461-31320480 | MS.gene46990:intron | 30.0% |
| !! | AGAATATTATGGTGGATGAA+TGG | - | chr3.1:31322903-31322922 | None:intergenic | 30.0% |
| !! | ATTTCATTTTTCAATGCTGC+AGG | + | chr3.1:31324139-31324158 | MS.gene46990:intron | 30.0% |
| !! | CACTTATGCTTTTAACTACT+GGG | + | chr3.1:31322745-31322764 | MS.gene46990:intron | 30.0% |
| !! | GAATATTATGGTGGATGAAT+GGG | - | chr3.1:31322902-31322921 | None:intergenic | 30.0% |
| !! | GCTTTAAGGAAGAGTATTAA+TGG | + | chr3.1:31319377-31319396 | MS.gene46990:CDS | 30.0% |
| !! | TCAAAATGAGTGTCACTTTA+GGG | - | chr3.1:31320454-31320473 | None:intergenic | 30.0% |
| !! | TCACTTATGCTTTTAACTAC+TGG | + | chr3.1:31322744-31322763 | MS.gene46990:intron | 30.0% |
| !! | TTCAAAATGAGTGTCACTTT+AGG | - | chr3.1:31320455-31320474 | None:intergenic | 30.0% |
| !! | TTTTGAATCCATTTTTCCCA+AGG | + | chr3.1:31324229-31324248 | MS.gene46990:CDS | 30.0% |
| !! | TTTTGGGAGTAGTGTATATA+AGG | + | chr3.1:31320356-31320375 | MS.gene46990:intron | 30.0% |
| !!! | AAGTTGGTGATCTTTTACTT+AGG | + | chr3.1:31319579-31319598 | MS.gene46990:CDS | 30.0% |
| !!! | AATTTTTTGCTCATTTGCTC+GGG | + | chr3.1:31322178-31322197 | MS.gene46990:CDS | 30.0% |
| !!! | TCCATTACTCTAGTTTTCAA+TGG | + | chr3.1:31323355-31323374 | MS.gene46990:intron | 30.0% |
| AAAGCAATAAAAACCCAGGA+AGG | - | chr3.1:31322792-31322811 | None:intergenic | 35.0% | |
| AAATCAAATGGACGAAATGG+AGG | - | chr3.1:31323194-31323213 | None:intergenic | 35.0% | |
| AACGTGATGTGAAGAGAATT+AGG | + | chr3.1:31318895-31318914 | MS.gene46990:CDS | 35.0% | |
| AACGTTGGGTTCAAATCAAA+TGG | - | chr3.1:31323206-31323225 | None:intergenic | 35.0% | |
| AACTATAAAGCAGCGGAATT+TGG | + | chr3.1:31321149-31321168 | MS.gene46990:intron | 35.0% | |
| AATATATTGGTGGAGCAGTT+TGG | + | chr3.1:31323977-31323996 | MS.gene46990:intron | 35.0% | |
| ACACAAGACATGATACACTT+AGG | - | chr3.1:31322878-31322897 | None:intergenic | 35.0% | |
| ACGTGATGTGAAGAGAATTA+GGG | + | chr3.1:31318896-31318915 | MS.gene46990:CDS | 35.0% | |
| AGACTAATCTTGTCAATCTG+CGG | + | chr3.1:31321775-31321794 | MS.gene46990:CDS | 35.0% | |
| AGCTTAGCTAAAAATCCACT+GGG | - | chr3.1:31323631-31323650 | None:intergenic | 35.0% | |
| AGGAAACTTCGTGTTAACAA+CGG | - | chr3.1:31319558-31319577 | None:intergenic | 35.0% | |
| AGGGATAGAGTTGAAAAGAA+TGG | + | chr3.1:31319149-31319168 | MS.gene46990:CDS | 35.0% | |
| AGTAAAAGATCACCAACTTG+AGG | - | chr3.1:31319578-31319597 | None:intergenic | 35.0% | |
| AGTAGTTTGAAGGATGACTA+AGG | + | chr3.1:31320484-31320503 | MS.gene46990:intron | 35.0% | |
| ATATAAGGATGATTCCGATG+AGG | + | chr3.1:31318992-31319011 | MS.gene46990:CDS | 35.0% | |
| ATATATGATAAGACGTGCCA+AGG | - | chr3.1:31322216-31322235 | None:intergenic | 35.0% | |
| ATCATCCTCGCTAACTTAAA+CGG | - | chr3.1:31319305-31319324 | None:intergenic | 35.0% | |
| ATCGAAAAAGGAATAGGGAT+AGG | + | chr3.1:31318829-31318848 | MS.gene46990:CDS | 35.0% | |
| ATCTGCCATAAACAACATCA+TGG | - | chr3.1:31323238-31323257 | None:intergenic | 35.0% | |
| ATGATTGTGTTGCACTTACA+GGG | + | chr3.1:31321368-31321387 | MS.gene46990:intron | 35.0% | |
| ATGTGAAGAGAATTAGGGAT+AGG | + | chr3.1:31318901-31318920 | MS.gene46990:CDS | 35.0% | |
| ATTTATTTGTTTCGAGCCTG+TGG | - | chr3.1:31322143-31322162 | None:intergenic | 35.0% | |
| CAAAATACTTCCTTGAGAGA+TGG | - | chr3.1:31323515-31323534 | None:intergenic | 35.0% | |
| CATAAGAAAGGCAAAGTTTC+AGG | + | chr3.1:31321054-31321073 | MS.gene46990:CDS | 35.0% | |
| CATGGGAGATATAAAACGTT+GGG | - | chr3.1:31323220-31323239 | None:intergenic | 35.0% | |
| CGATCCATCATAGGATATTA+TGG | - | chr3.1:31322669-31322688 | None:intergenic | 35.0% | |
| CTGAAACTTTGCCTTTCTTA+TGG | - | chr3.1:31321056-31321075 | None:intergenic | 35.0% | |
| GAAAGTAAGAAGAAAGAGGA+AGG | + | chr3.1:31319191-31319210 | MS.gene46990:CDS | 35.0% | |
| GATAGAGTTGAAAAGAATGG+TGG | + | chr3.1:31319152-31319171 | MS.gene46990:CDS | 35.0% | |
| GATGCCATAATATCCTATGA+TGG | + | chr3.1:31322662-31322681 | MS.gene46990:intron | 35.0% | |
| GCCATTGAAAACTAGAGTAA+TGG | - | chr3.1:31323359-31323378 | None:intergenic | 35.0% | |
| GGAAGAAAGTAAGAAGAAAG+AGG | + | chr3.1:31319187-31319206 | MS.gene46990:CDS | 35.0% | |
| GTAAAATTGGAAAACACGCA+AGG | - | chr3.1:31319666-31319685 | None:intergenic | 35.0% | |
| TAGAATCAGTTAAGGGATTC+AGG | - | chr3.1:31320596-31320615 | None:intergenic | 35.0% | |
| TCAGATATTACGGTCTTCTA+GGG | + | chr3.1:31322043-31322062 | MS.gene46990:CDS | 35.0% | |
| TCATGGGAGATATAAAACGT+TGG | - | chr3.1:31323221-31323240 | None:intergenic | 35.0% | |
| TCGAAAAAGGAATAGGGATA+GGG | + | chr3.1:31318830-31318849 | MS.gene46990:CDS | 35.0% | |
| TCTGCCATAAACAACATCAT+GGG | - | chr3.1:31323237-31323256 | None:intergenic | 35.0% | |
| TGTGAAGAGAATTAGGGATA+GGG | + | chr3.1:31318902-31318921 | MS.gene46990:CDS | 35.0% | |
| TGTTGTCAAATCACAGATAG+CGG | - | chr3.1:31321281-31321300 | None:intergenic | 35.0% | |
| TTAACCTCTCATTTAGCAAC+CGG | - | chr3.1:31324187-31324206 | None:intergenic | 35.0% | |
| TTTATATGTTCAGCCTTCCT+GGG | + | chr3.1:31322776-31322795 | MS.gene46990:intron | 35.0% | |
| TTTATGTACCCAACCTTAAG+TGG | - | chr3.1:31322637-31322656 | None:intergenic | 35.0% | |
| ! | AAAGGAGGCATATAGTTGAT+AGG | + | chr3.1:31319045-31319064 | MS.gene46990:CDS | 35.0% |
| ! | AAGGAGGCATATAGTTGATA+GGG | + | chr3.1:31319046-31319065 | MS.gene46990:CDS | 35.0% |
| ! | AAGGATGGGCAAAACTATTT+TGG | - | chr3.1:31323476-31323495 | None:intergenic | 35.0% |
| ! | AATGTCCAGTGTAGATTTTG+AGG | + | chr3.1:31321818-31321837 | MS.gene46990:CDS | 35.0% |
| ! | AGAATTTGATTCGTGGAAGA+GGG | + | chr3.1:31319459-31319478 | MS.gene46990:CDS | 35.0% |
| ! | AGGAAGAAGTTGATCGAAAA+AGG | + | chr3.1:31318817-31318836 | MS.gene46990:CDS | 35.0% |
| ! | ATCTCCCATGATGTTGTTTA+TGG | + | chr3.1:31323230-31323249 | MS.gene46990:intron | 35.0% |
| ! | ATGCAGAATCGTGTGTTTTT+AGG | - | chr3.1:31324260-31324279 | None:intergenic | 35.0% |
| ! | CATTCACAAGTGAGTTTTAC+TGG | - | chr3.1:31323802-31323821 | None:intergenic | 35.0% |
| ! | CATTTTCACAAATACACGGA+TGG | - | chr3.1:31320892-31320911 | None:intergenic | 35.0% |
| ! | GGCTTGTATTTCTGAAAACA+TGG | + | chr3.1:31320062-31320081 | MS.gene46990:intron | 35.0% |
| ! | TCCCTTAACTGATTCTACTT+CGG | + | chr3.1:31320599-31320618 | MS.gene46990:intron | 35.0% |
| ! | TTTTATATGTTCAGCCTTCC+TGG | + | chr3.1:31322775-31322794 | MS.gene46990:intron | 35.0% |
| ! | TTTTTCCAACAGGGGTTATA+AGG | + | chr3.1:31320723-31320742 | MS.gene46990:intron | 35.0% |
| !! | ACTATTTTATTGTTTGGGGC+AGG | + | chr3.1:31321080-31321099 | MS.gene46990:intron | 35.0% |
| !! | ACTGCAAAAATGGTTTTGCT+TGG | - | chr3.1:31320750-31320769 | None:intergenic | 35.0% |
| !! | ATGCAGAAGTATTCTAATGC+AGG | + | chr3.1:31320866-31320885 | MS.gene46990:intron | 35.0% |
| !! | CAAAATGAGTGTCACTTTAG+GGG | - | chr3.1:31320453-31320472 | None:intergenic | 35.0% |
| !! | CTGCAAAAATGGTTTTGCTT+GGG | - | chr3.1:31320749-31320768 | None:intergenic | 35.0% |
| !! | GACACTCATTTTGAAAACAG+AGG | + | chr3.1:31320460-31320479 | MS.gene46990:intron | 35.0% |
| !! | GTTTTGTTCTTTTGTTTGCG+AGG | - | chr3.1:31322578-31322597 | None:intergenic | 35.0% |
| !! | TAATATCCTATGATGGATCG+TGG | + | chr3.1:31322669-31322688 | MS.gene46990:intron | 35.0% |
| !! | TGCAGAATCGTGTGTTTTTA+GGG | - | chr3.1:31324259-31324278 | None:intergenic | 35.0% |
| !! | TTGGTGATCTTTTACTTAGG+AGG | + | chr3.1:31319582-31319601 | MS.gene46990:CDS | 35.0% |
| !! | TTGGTGGTTTGCTAGAAAAT+AGG | + | chr3.1:31320515-31320534 | MS.gene46990:intron | 35.0% |
| !! | TTTTTCACATCCATTGGTCT+TGG | + | chr3.1:31324284-31324303 | MS.gene46990:CDS | 35.0% |
| AAACAGAGGGAGTAGTTTGA+AGG | + | chr3.1:31320474-31320493 | MS.gene46990:intron | 40.0% | |
| AAAGGAATAGGGATAGGGAT+AGG | + | chr3.1:31318835-31318854 | MS.gene46990:CDS | 40.0% | |
| AAATTCTCCGCAAACAACTC+TGG | - | chr3.1:31319446-31319465 | None:intergenic | 40.0% | |
| AACACGAAGTTTCCTCAAGT+TGG | + | chr3.1:31319563-31319582 | MS.gene46990:CDS | 40.0% | |
| AACAGCCTAAATAGCAGCAT+TGG | - | chr3.1:31323405-31323424 | None:intergenic | 40.0% | |
| AACGAATCTCCAAACTGCTA+TGG | - | chr3.1:31323920-31323939 | None:intergenic | 40.0% | |
| AAGAACCCTTATACCTTCGA+CGG | - | chr3.1:31318866-31318885 | None:intergenic | 40.0% | |
| AAGAAGAAAGAGGAAGGAAG+TGG | + | chr3.1:31319197-31319216 | MS.gene46990:CDS | 40.0% | |
| AAGCTCCGATTCATCAGATT+CGG | + | chr3.1:31324409-31324428 | MS.gene46990:CDS | 40.0% | |
| AAGGAATAGGGATAGGGATA+GGG | + | chr3.1:31318836-31318855 | MS.gene46990:CDS | 40.0% | |
| AATGGAACCTATGCTCATCA+TGG | + | chr3.1:31323040-31323059 | MS.gene46990:intron | 40.0% | |
| AATGGCGATGCATCTAAGTT+AGG | + | chr3.1:31319254-31319273 | MS.gene46990:CDS | 40.0% | |
| AATTTCTCACCCATCTCTCA+AGG | + | chr3.1:31323502-31323521 | MS.gene46990:intron | 40.0% | |
| AGAAGAAAGAGGAAGGAAGT+GGG | + | chr3.1:31319198-31319217 | MS.gene46990:CDS | 40.0% | |
| AGAGGAATTTGGATAGGGAA+AGG | + | chr3.1:31319027-31319046 | MS.gene46990:CDS | 40.0% | |
| AGAGTTGAAGAAAAGCTTGC+TGG | + | chr3.1:31321644-31321663 | MS.gene46990:CDS | 40.0% | |
| AGCAAATACATCCGTAAACC+CGG | - | chr3.1:31319525-31319544 | None:intergenic | 40.0% | |
| AGCAGTATTCATTGATCCAC+AGG | + | chr3.1:31322124-31322143 | MS.gene46990:CDS | 40.0% | |
| AGCGTATAAGCGTAATGACA+AGG | + | chr3.1:31319625-31319644 | MS.gene46990:CDS | 40.0% | |
| AGCTTCCTCATTCTCTTCAT+CGG | - | chr3.1:31321733-31321752 | None:intergenic | 40.0% | |
| AGGATCTATTTCCTCATCCA+AGG | - | chr3.1:31321459-31321478 | None:intergenic | 40.0% | |
| AGTTGACGATAAGAGTAGTC+CGG | + | chr3.1:31319331-31319350 | MS.gene46990:CDS | 40.0% | |
| ATACCGGCAAGTGTGATAAA+TGG | + | chr3.1:31319236-31319255 | MS.gene46990:CDS | 40.0% | |
| ATATCATGTGTGGGATGTAC+TGG | + | chr3.1:31324067-31324086 | MS.gene46990:intron | 40.0% | |
| ATCATATATTCGCCTGACTG+AGG | + | chr3.1:31322227-31322246 | MS.gene46990:CDS | 40.0% | |
| ATCGTGTATGAAGTCACAGA+TGG | + | chr3.1:31319493-31319512 | MS.gene46990:CDS | 40.0% | |
| ATGACGATGATAGGAGGAAT+GGG | + | chr3.1:31319120-31319139 | MS.gene46990:CDS | 40.0% | |
| ATGATGAGCATAGGTTCCAT+TGG | - | chr3.1:31323041-31323060 | None:intergenic | 40.0% | |
| ATGGAACCTATGCTCATCAT+GGG | + | chr3.1:31323041-31323060 | MS.gene46990:intron | 40.0% | |
| ATGGCGATGCATCTAAGTTA+GGG | + | chr3.1:31319255-31319274 | MS.gene46990:CDS | 40.0% | |
| ATGGTGCAACTATAAAGCAG+CGG | + | chr3.1:31321142-31321161 | MS.gene46990:intron | 40.0% | |
| ATTCTCCAGATAATTGGGGT+CGG | - | chr3.1:31321610-31321629 | None:intergenic | 40.0% | |
| CCCGAAGTAGAATCAGTTAA+GGG | - | chr3.1:31320603-31320622 | None:intergenic | 40.0% | |
| CGTATCTTCCATACAAAGAG+AGG | - | chr3.1:31324106-31324125 | None:intergenic | 40.0% | |
| CTAAAAATCCATCTTGAGCC+AGG | + | chr3.1:31321858-31321877 | MS.gene46990:CDS | 40.0% | |
| CTAAGTTAGGGAAAAGTGGA+GGG | + | chr3.1:31319267-31319286 | MS.gene46990:CDS | 40.0% | |
| CTCAGATATTACGGTCTTCT+AGG | + | chr3.1:31322042-31322061 | MS.gene46990:CDS | 40.0% | |
| GAATTAGGGATAGGGAAAGA+AGG | + | chr3.1:31318910-31318929 | MS.gene46990:CDS | 40.0% | |
| GAGCTTAGCTAAAAATCCAC+TGG | - | chr3.1:31323632-31323651 | None:intergenic | 40.0% | |
| GATGACTAAGGCATGATGAT+TGG | + | chr3.1:31320496-31320515 | MS.gene46990:intron | 40.0% | |
| GATGATTGTGTTGCACTTAC+AGG | + | chr3.1:31321367-31321386 | MS.gene46990:intron | 40.0% | |
| GCAAGTTTCAGATTCTGACT+CGG | + | chr3.1:31324373-31324392 | MS.gene46990:CDS | 40.0% | |
| GCATCTAAGTTAGGGAAAAG+TGG | + | chr3.1:31319263-31319282 | MS.gene46990:CDS | 40.0% | |
| GCTTAGCTAAAAATCCACTG+GGG | - | chr3.1:31323630-31323649 | None:intergenic | 40.0% | |
| GGATTCAAAAGAATCCTGCA+TGG | - | chr3.1:31324219-31324238 | None:intergenic | 40.0% | |
| GTTAAATGATCCAACCATGC+AGG | + | chr3.1:31324202-31324221 | MS.gene46990:CDS | 40.0% | |
| TAAGTTAGCGAGGATGATGA+AGG | + | chr3.1:31319307-31319326 | MS.gene46990:CDS | 40.0% | |
| TAAGTTAGGGAAAAGTGGAG+GGG | + | chr3.1:31319268-31319287 | MS.gene46990:CDS | 40.0% | |
| TACTGGTGAAAAAAAGGTCG+AGG | - | chr3.1:31323785-31323804 | None:intergenic | 40.0% | |
| TATTCACGCCTCTCTTTGTA+TGG | + | chr3.1:31324095-31324114 | MS.gene46990:intron | 40.0% | |
| TCAAAAGAATCCTGCATGGT+TGG | - | chr3.1:31324215-31324234 | None:intergenic | 40.0% | |
| TCCAAAGAAAAGAGAGGACA+AGG | + | chr3.1:31322549-31322568 | MS.gene46990:intron | 40.0% | |
| TCTAAGTTAGGGAAAAGTGG+AGG | + | chr3.1:31319266-31319285 | MS.gene46990:CDS | 40.0% | |
| TGAATCCGATGAAGAGAATG+AGG | + | chr3.1:31321725-31321744 | MS.gene46990:CDS | 40.0% | |
| TGCTTCCTCAAAATCTACAC+TGG | - | chr3.1:31321826-31321845 | None:intergenic | 40.0% | |
| TGTATGAAATGTTGCCACTG+CGG | + | chr3.1:31323428-31323447 | MS.gene46990:intron | 40.0% | |
| TGTGAAGTTTGTAGCACATC+TGG | + | chr3.1:31319761-31319780 | MS.gene46990:CDS | 40.0% | |
| TGTTGTTGCATGATCATCCT+TGG | - | chr3.1:31324350-31324369 | None:intergenic | 40.0% | |
| TTCACAGCAGCAAGTAATTG+AGG | - | chr3.1:31319747-31319766 | None:intergenic | 40.0% | |
| TTCCTGAACAAGTGACAACA+TGG | + | chr3.1:31323088-31323107 | MS.gene46990:intron | 40.0% | |
| TTGAGTTCGATTCAAGTACC+TGG | - | chr3.1:31322296-31322315 | None:intergenic | 40.0% | |
| TTTCGTGGAATTCTGCATGA+AGG | + | chr3.1:31320986-31321005 | MS.gene46990:CDS | 40.0% | |
| ! | AGAATGGTGGTGATAATGAG+AGG | + | chr3.1:31319165-31319184 | MS.gene46990:CDS | 40.0% |
| ! | ATCTGAGATAAGTTCTCTCC+TGG | - | chr3.1:31322029-31322048 | None:intergenic | 40.0% |
| ! | CCCTTAACTGATTCTACTTC+GGG | + | chr3.1:31320600-31320619 | MS.gene46990:intron | 40.0% |
| ! | CCTTAACTGATTCTACTTCG+GGG | + | chr3.1:31320601-31320620 | MS.gene46990:intron | 40.0% |
| ! | GAATGGTGGTGATAATGAGA+GGG | + | chr3.1:31319166-31319185 | MS.gene46990:CDS | 40.0% |
| ! | GAGAATTTGATTCGTGGAAG+AGG | + | chr3.1:31319458-31319477 | MS.gene46990:CDS | 40.0% |
| ! | GAGTTGAAGAAAAGCTTGCT+GGG | + | chr3.1:31321645-31321664 | MS.gene46990:CDS | 40.0% |
| ! | GATAACCGTCGAAGGTATAA+GGG | + | chr3.1:31318858-31318877 | MS.gene46990:CDS | 40.0% |
| ! | GCATACCAATGCTGCTATTT+AGG | + | chr3.1:31323397-31323416 | MS.gene46990:intron | 40.0% |
| ! | TCCTTGTCCTCTCTTTTCTT+TGG | - | chr3.1:31322553-31322572 | None:intergenic | 40.0% |
| ! | TGCAAGTTGGGAACAAATGA+GGG | - | chr3.1:31323607-31323626 | None:intergenic | 40.0% |
| ! | TTCCATGTTGTCACTTGTTC+AGG | - | chr3.1:31323093-31323112 | None:intergenic | 40.0% |
| ! | TTGTGTGTCATTGATGCAGA+TGG | + | chr3.1:31321972-31321991 | MS.gene46990:intron | 40.0% |
| ! | TTTGCGGAGAATTTGATTCG+TGG | + | chr3.1:31319452-31319471 | MS.gene46990:CDS | 40.0% |
| !! | AGTGTAGATTTTGAGGAAGC+AGG | + | chr3.1:31321825-31321844 | MS.gene46990:CDS | 40.0% |
| !!! | GTGTTTTTAGGGTTGTCCTT+GGG | - | chr3.1:31324248-31324267 | None:intergenic | 40.0% |
| !!! | GTTGGTTTTGTGACAGAATG+TGG | + | chr3.1:31319873-31319892 | MS.gene46990:CDS | 40.0% |
| !!! | TGTGTTTTTAGGGTTGTCCT+TGG | - | chr3.1:31324249-31324268 | None:intergenic | 40.0% |
| AACTCACCATGAAGTCCTCT+CGG | - | chr3.1:31319921-31319940 | None:intergenic | 45.0% | |
| AATGTACCAAGGGAAGTCTC+AGG | - | chr3.1:31321479-31321498 | None:intergenic | 45.0% | |
| ACTCATGCCCAAAACAACTG+GGG | + | chr3.1:31322816-31322835 | MS.gene46990:intron | 45.0% | |
| ACTCATTCCAGTGGCATCAA+TGG | - | chr3.1:31323327-31323346 | None:intergenic | 45.0% | |
| ACTTCAACACTGTCATCGGA+AGG | - | chr3.1:31319849-31319868 | None:intergenic | 45.0% | |
| ACTTGACTCTGACTCAGAAC+TGG | - | chr3.1:31324438-31324457 | None:intergenic | 45.0% | |
| AGAAGGACAGGAAGAGAGAA+AGG | + | chr3.1:31319087-31319106 | MS.gene46990:CDS | 45.0% | |
| AGCCACTTCAACACTGTCAT+CGG | - | chr3.1:31319853-31319872 | None:intergenic | 45.0% | |
| AGCTCCGATTCATCAGATTC+GGG | + | chr3.1:31324410-31324429 | MS.gene46990:CDS | 45.0% | |
| AGGATCTCAACTCATTCCAG+TGG | - | chr3.1:31323336-31323355 | None:intergenic | 45.0% | |
| AGGCACTAGTTAGACTTGGA+TGG | - | chr3.1:31323759-31323778 | None:intergenic | 45.0% | |
| AGGGTTGTCCTTGGGAAAAA+TGG | - | chr3.1:31324240-31324259 | None:intergenic | 45.0% | |
| AGTAAGACCACCAAGACCAA+TGG | - | chr3.1:31324297-31324316 | None:intergenic | 45.0% | |
| ATAGAGCCACGATCCATCAT+AGG | - | chr3.1:31322678-31322697 | None:intergenic | 45.0% | |
| ATAGATCCTGAGACTTCCCT+TGG | + | chr3.1:31321470-31321489 | MS.gene46990:CDS | 45.0% | |
| ATCCTCGCTAACTTAAACGG+CGG | - | chr3.1:31319302-31319321 | None:intergenic | 45.0% | |
| ATGTACCCAACCTTAAGTGG+TGG | - | chr3.1:31322634-31322653 | None:intergenic | 45.0% | |
| ATTGCCAACTGAAGCTGGAA+TGG | - | chr3.1:31323303-31323322 | None:intergenic | 45.0% | |
| CAAATGGACGAAATGGAGGA+AGG | - | chr3.1:31323190-31323209 | None:intergenic | 45.0% | |
| CAAGTCAACCTCTGATACTC+CGG | - | chr3.1:31319353-31319372 | None:intergenic | 45.0% | |
| CACTCATGCCCAAAACAACT+GGG | + | chr3.1:31322815-31322834 | MS.gene46990:intron | 45.0% | |
| CCCCGAAGTAGAATCAGTTA+AGG | - | chr3.1:31320604-31320623 | None:intergenic | 45.0% | |
| CCTACTTGAATCAGCATGCT+AGG | - | chr3.1:31323678-31323697 | None:intergenic | 45.0% | |
| CTAATCTTGTCAATCTGCGG+CGG | + | chr3.1:31321778-31321797 | MS.gene46990:CDS | 45.0% | |
| GAAGGACAGGAAGAGAGAAA+GGG | + | chr3.1:31319088-31319107 | MS.gene46990:CDS | 45.0% | |
| GACTAAGGCATGATGATTGG+TGG | + | chr3.1:31320499-31320518 | MS.gene46990:intron | 45.0% | |
| GACTTGGATGGAACTAAGCA+AGG | - | chr3.1:31323747-31323766 | None:intergenic | 45.0% | |
| GATGACGATGATAGGAGGAA+TGG | + | chr3.1:31319119-31319138 | MS.gene46990:CDS | 45.0% | |
| GCAAATACATCCGTAAACCC+GGG | - | chr3.1:31319524-31319543 | None:intergenic | 45.0% | |
| GGAATTTGGATAGGGAAAGG+AGG | + | chr3.1:31319030-31319049 | MS.gene46990:CDS | 45.0% | |
| GGCATGGCCAGAAAAACATT+TGG | - | chr3.1:31323726-31323745 | None:intergenic | 45.0% | |
| GGTTCCCGAATCTGATGAAT+CGG | - | chr3.1:31324417-31324436 | None:intergenic | 45.0% | |
| TACAGGGTTATCCAGCTGTT+CGG | + | chr3.1:31321384-31321403 | MS.gene46990:intron | 45.0% | |
| TCAATGCTTACCTCTTGACC+TGG | - | chr3.1:31321879-31321898 | None:intergenic | 45.0% | |
| TCACTCATGCCCAAAACAAC+TGG | + | chr3.1:31322814-31322833 | MS.gene46990:intron | 45.0% | |
| TCGCCATTTATCACACTTGC+CGG | - | chr3.1:31319242-31319261 | None:intergenic | 45.0% | |
| TGAAAAAAAGGTCGAGGCTG+AGG | - | chr3.1:31323779-31323798 | None:intergenic | 45.0% | |
| TGACGATGATAGGAGGAATG+GGG | + | chr3.1:31319121-31319140 | MS.gene46990:CDS | 45.0% | |
| TGTACCCAACCTTAAGTGGT+GGG | - | chr3.1:31322633-31322652 | None:intergenic | 45.0% | |
| TGTTTATGGCAGATGATGCC+AGG | + | chr3.1:31323244-31323263 | MS.gene46990:intron | 45.0% | |
| TTCTCCAGATAATTGGGGTC+GGG | - | chr3.1:31321609-31321628 | None:intergenic | 45.0% | |
| TTGGGAACAAATGAGGGAGT+GGG | - | chr3.1:31323601-31323620 | None:intergenic | 45.0% | |
| ! | AAAGAAGGCATAGGGCTGAT+AGG | + | chr3.1:31318925-31318944 | MS.gene46990:CDS | 45.0% |
| ! | AAGAAGGCATAGGGCTGATA+GGG | + | chr3.1:31318926-31318945 | MS.gene46990:CDS | 45.0% |
| ! | ATTTTGGACTTGTGCCTGCA+GGG | - | chr3.1:31323460-31323479 | None:intergenic | 45.0% |
| ! | CAGGAATTGTCAGAGCATCT+AGG | + | chr3.1:31324158-31324177 | MS.gene46990:intron | 45.0% |
| ! | GGAGTATCAGAGGTTGACTT+GGG | + | chr3.1:31319352-31319371 | MS.gene46990:CDS | 45.0% |
| ! | GGATAACCGTCGAAGGTATA+AGG | + | chr3.1:31318857-31318876 | MS.gene46990:CDS | 45.0% |
| ! | GGATAGGGAAAGAAGGCATA+GGG | + | chr3.1:31318917-31318936 | MS.gene46990:CDS | 45.0% |
| ! | GGTATCTTTGAGCGTTTTCG+TGG | + | chr3.1:31320971-31320990 | MS.gene46990:intron | 45.0% |
| ! | GGTGGATGAAAGGTACACTT+GGG | - | chr3.1:31323282-31323301 | None:intergenic | 45.0% |
| ! | GTGCAAGTTGGGAACAAATG+AGG | - | chr3.1:31323608-31323627 | None:intergenic | 45.0% |
| ! | GTGGATGAAAGGTACACTTG+GGG | - | chr3.1:31323281-31323300 | None:intergenic | 45.0% |
| ! | TACGGATGTATTTGCTGCGA+TGG | + | chr3.1:31319529-31319548 | MS.gene46990:CDS | 45.0% |
| ! | TCGTGGTGGTGAAGATTTAG+AGG | + | chr3.1:31318797-31318816 | MS.gene46990:CDS | 45.0% |
| ! | TGGTGGATGAAAGGTACACT+TGG | - | chr3.1:31323283-31323302 | None:intergenic | 45.0% |
| ! | TTCCGATGACAGTGTTGAAG+TGG | + | chr3.1:31319848-31319867 | MS.gene46990:CDS | 45.0% |
| !! | AAGCTGGAATGGTGGATGAA+AGG | - | chr3.1:31323292-31323311 | None:intergenic | 45.0% |
| !! | ACTCTTGCCCCAGTTGTTTT+GGG | - | chr3.1:31322826-31322845 | None:intergenic | 45.0% |
| !! | CCTAGCATGCTGATTCAAGT+AGG | + | chr3.1:31323675-31323694 | MS.gene46990:intron | 45.0% |
| !! | GGTTGACTTGGGATGCTTTA+AGG | + | chr3.1:31319363-31319382 | MS.gene46990:CDS | 45.0% |
| !! | TATTTTGGACTTGTGCCTGC+AGG | - | chr3.1:31323461-31323480 | None:intergenic | 45.0% |
| !! | TTCACATCCATTGGTCTTGG+TGG | + | chr3.1:31324287-31324306 | MS.gene46990:CDS | 45.0% |
| AAATCCACTGGGGTGCAAGT+TGG | - | chr3.1:31323620-31323639 | None:intergenic | 50.0% | |
| AATCCACTGGGGTGCAAGTT+GGG | - | chr3.1:31323619-31323638 | None:intergenic | 50.0% | |
| AGAATGTGGCTCAATGCTGC+AGG | + | chr3.1:31319887-31319906 | MS.gene46990:CDS | 50.0% | |
| AGATCGGCGTCGTCGATATA+AGG | + | chr3.1:31318977-31318996 | MS.gene46990:CDS | 50.0% | |
| AGTGAATCGTCCGAGGAAGA+AGG | + | chr3.1:31318702-31318721 | MS.gene46990:CDS | 50.0% | |
| ATAGGAGGAATGGGGAGAGA+AGG | + | chr3.1:31319129-31319148 | MS.gene46990:CDS | 50.0% | |
| ATCGACGCGATGACGATGAT+AGG | + | chr3.1:31319111-31319130 | MS.gene46990:CDS | 50.0% | |
| ATGGCATTGCCAACTGAAGC+TGG | - | chr3.1:31323308-31323327 | None:intergenic | 50.0% | |
| CAAACCCGACCCCAATTATC+TGG | + | chr3.1:31321602-31321621 | MS.gene46990:CDS | 50.0% | |
| CAGTGTGGCAGATTGCATTG+CGG | - | chr3.1:31323897-31323916 | None:intergenic | 50.0% | |
| CTCATCCAAGGAGACTTCGT+GGG | - | chr3.1:31321447-31321466 | None:intergenic | 50.0% | |
| CTTCACCACCACGATGTTTC+CGG | - | chr3.1:31318791-31318810 | None:intergenic | 50.0% | |
| GACGAAATGGAGGAAGGCTT+TGG | - | chr3.1:31323184-31323203 | None:intergenic | 50.0% | |
| GATAACCCACGAAGTCTCCT+TGG | + | chr3.1:31321439-31321458 | MS.gene46990:CDS | 50.0% | |
| GCAAGACAGCAGGCAAACAA+GGG | - | chr3.1:31323654-31323673 | None:intergenic | 50.0% | |
| GCATAGGGCTGATAGGGTTA+GGG | + | chr3.1:31318932-31318951 | MS.gene46990:CDS | 50.0% | |
| GCATCCGGTTGCTAAATGAG+AGG | + | chr3.1:31324180-31324199 | MS.gene46990:CDS | 50.0% | |
| GGATGGAACTAAGCAAGGCA+TGG | - | chr3.1:31323742-31323761 | None:intergenic | 50.0% | |
| GGTGAGGAAGAGGAATCAGA+GGG | + | chr3.1:31321666-31321685 | MS.gene46990:CDS | 50.0% | |
| GTACCCAACCTTAAGTGGTG+GGG | - | chr3.1:31322632-31322651 | None:intergenic | 50.0% | |
| GTGAATCGTCCGAGGAAGAA+GGG | + | chr3.1:31318703-31318722 | MS.gene46990:CDS | 50.0% | |
| GTTGGGAACAAATGAGGGAG+TGG | - | chr3.1:31323602-31323621 | None:intergenic | 50.0% | |
| TACCCAACCTTAAGTGGTGG+GGG | - | chr3.1:31322631-31322650 | None:intergenic | 50.0% | |
| TAGGAGGAATGGGGAGAGAA+GGG | + | chr3.1:31319130-31319149 | MS.gene46990:CDS | 50.0% | |
| TCCAAACTGCTATGGCAGTG+TGG | - | chr3.1:31323912-31323931 | None:intergenic | 50.0% | |
| TCCACCATTCCAGCTTCAGT+TGG | + | chr3.1:31323296-31323315 | MS.gene46990:intron | 50.0% | |
| TGATTCTACTTCGGGGTCTG+AGG | + | chr3.1:31320608-31320627 | MS.gene46990:intron | 50.0% | |
| TGCAAGACAGCAGGCAAACA+AGG | - | chr3.1:31323655-31323674 | None:intergenic | 50.0% | |
| TGCGGCTAGATCAATGACAG+AGG | - | chr3.1:31323879-31323898 | None:intergenic | 50.0% | |
| TGGTGTCCCATGATGAGCAT+AGG | - | chr3.1:31323050-31323069 | None:intergenic | 50.0% | |
| TTCCCCCACCACTTAAGGTT+GGG | + | chr3.1:31322626-31322645 | MS.gene46990:intron | 50.0% | |
| TTTCCCCCACCACTTAAGGT+TGG | + | chr3.1:31322625-31322644 | MS.gene46990:intron | 50.0% | |
| ! | AGAGTAGTCCGGAGTATCAG+AGG | + | chr3.1:31319342-31319361 | MS.gene46990:CDS | 50.0% |
| ! | CGGAGTATCAGAGGTTGACT+TGG | + | chr3.1:31319351-31319370 | MS.gene46990:CDS | 50.0% |
| ! | GACAGTGTTGAAGTGGCTGT+TGG | + | chr3.1:31319855-31319874 | MS.gene46990:CDS | 50.0% |
| ! | GACTCTTGCCCCAGTTGTTT+TGG | - | chr3.1:31322827-31322846 | None:intergenic | 50.0% |
| ! | GATGAAAGGTACACTTGGGG+CGG | - | chr3.1:31323278-31323297 | None:intergenic | 50.0% |
| ! | GCATTTTCCCCCACCACTTA+AGG | + | chr3.1:31322621-31322640 | MS.gene46990:intron | 50.0% |
| ! | GCTGAGGCACTAGTTAGACT+TGG | - | chr3.1:31323763-31323782 | None:intergenic | 50.0% |
| ! | GGGATAGGGAAAGAAGGCAT+AGG | + | chr3.1:31318916-31318935 | MS.gene46990:CDS | 50.0% |
| ! | TGTCAGAGCATCTAGGCATC+CGG | + | chr3.1:31324165-31324184 | MS.gene46990:CDS | 50.0% |
| ! | TTCCGCCGTTTAAGTTAGCG+AGG | + | chr3.1:31319297-31319316 | MS.gene46990:CDS | 50.0% |
| ! | TTGGGCCTTATAACCCCTGT+TGG | - | chr3.1:31320731-31320750 | None:intergenic | 50.0% |
| !! | AGGGAGTGGGTTTTCTTCGA+CGG | - | chr3.1:31323588-31323607 | None:intergenic | 50.0% |
| !! | GAAGAAAAGCTTGCTGGGTG+AGG | + | chr3.1:31321650-31321669 | MS.gene46990:CDS | 50.0% |
| AAGTCACAGATGGCGTCACC+CGG | + | chr3.1:31319503-31319522 | MS.gene46990:CDS | 55.0% | |
| AAGTCGTGTCGTCCTCAGTC+AGG | - | chr3.1:31322242-31322261 | None:intergenic | 55.0% | |
| ACCTCCTCCTCTGCTAGTGA+TGG | + | chr3.1:31320122-31320141 | MS.gene46990:intron | 55.0% | |
| ACTCTCCCCATCACTAGCAG+AGG | - | chr3.1:31320132-31320151 | None:intergenic | 55.0% | |
| ATCAGAGGGAGAGGAAGGCT+CGG | + | chr3.1:31321680-31321699 | MS.gene46990:CDS | 55.0% | |
| CACTAGCAGAGGAGGAGGTA+AGG | - | chr3.1:31320121-31320140 | None:intergenic | 55.0% | |
| CATGCTAGGTGCAAGACAGC+AGG | - | chr3.1:31323664-31323683 | None:intergenic | 55.0% | |
| CCACGAAGTCTCCTTGGATG+AGG | + | chr3.1:31321445-31321464 | MS.gene46990:CDS | 55.0% | |
| CCATCTTGAGCCAGGTCAAG+AGG | + | chr3.1:31321866-31321885 | MS.gene46990:CDS | 55.0% | |
| CCTCATCCAAGGAGACTTCG+TGG | - | chr3.1:31321448-31321467 | None:intergenic | 55.0% | |
| CCTCCTCCTCTGCTAGTGAT+GGG | + | chr3.1:31320123-31320142 | MS.gene46990:intron | 55.0% | |
| CCTCTTGACCTGGCTCAAGA+TGG | - | chr3.1:31321869-31321888 | None:intergenic | 55.0% | |
| CGAAGGAAGTGAATCGTCCG+AGG | + | chr3.1:31318695-31318714 | MS.gene46990:CDS | 55.0% | |
| CTCCTCCTCTGCTAGTGATG+GGG | + | chr3.1:31320124-31320143 | MS.gene46990:intron | 55.0% | |
| CTCTCACCGAGAGGACTTCA+TGG | + | chr3.1:31319912-31319931 | MS.gene46990:CDS | 55.0% | |
| GACGAACTGCCCTTCTTCCT+CGG | - | chr3.1:31318715-31318734 | None:intergenic | 55.0% | |
| GACGCGATGACGATGATAGG+AGG | + | chr3.1:31319114-31319133 | MS.gene46990:CDS | 55.0% | |
| GAGGAATCAGAGGGAGAGGA+AGG | + | chr3.1:31321675-31321694 | MS.gene46990:CDS | 55.0% | |
| GATCTTCGCCGGAAACATCG+TGG | + | chr3.1:31318780-31318799 | MS.gene46990:CDS | 55.0% | |
| GCCAACTGAAGCTGGAATGG+TGG | - | chr3.1:31323300-31323319 | None:intergenic | 55.0% | |
| GCCACACTGCCATAGCAGTT+TGG | + | chr3.1:31323908-31323927 | MS.gene46990:intron | 55.0% | |
| GCTTCTCGAATGTTGCAGCC+AGG | + | chr3.1:31322008-31322027 | MS.gene46990:CDS | 55.0% | |
| GGAAGAGGAATCAGAGGGAG+AGG | + | chr3.1:31321671-31321690 | MS.gene46990:CDS | 55.0% | |
| GGAAGGCTCGGATGCTGAAT+CGG | + | chr3.1:31321692-31321711 | MS.gene46990:CDS | 55.0% | |
| GGCAATGCCATTGATGCCAC+TGG | + | chr3.1:31323317-31323336 | MS.gene46990:intron | 55.0% | |
| GGCATAGGGCTGATAGGGTT+AGG | + | chr3.1:31318931-31318950 | MS.gene46990:CDS | 55.0% | |
| GGGATAGGGATAACCGTCGA+AGG | + | chr3.1:31318850-31318869 | MS.gene46990:CDS | 55.0% | |
| GGGTGAGGAAGAGGAATCAG+AGG | + | chr3.1:31321665-31321684 | MS.gene46990:CDS | 55.0% | |
| TATCGCGCTAGAGCTGCTCA+CGG | + | chr3.1:31319809-31319828 | MS.gene46990:CDS | 55.0% | |
| TCAAGTTCAGGCCGAACAGC+TGG | - | chr3.1:31321398-31321417 | None:intergenic | 55.0% | |
| TCTGATCTTCCTGCTCCACG+AGG | - | chr3.1:31321421-31321440 | None:intergenic | 55.0% | |
| TGAACTTGACCTCGTGGAGC+AGG | + | chr3.1:31321409-31321428 | MS.gene46990:CDS | 55.0% | |
| TGCTCCACGAGGTCAAGTTC+AGG | - | chr3.1:31321410-31321429 | None:intergenic | 55.0% | |
| ! | TCGGGACTTTTGCTCTGCCT+TGG | + | chr3.1:31322196-31322215 | MS.gene46990:CDS | 55.0% |
| ! | TCTGCTAGTGATGGGGAGAG+TGG | + | chr3.1:31320131-31320150 | MS.gene46990:intron | 55.0% |
| !! | AAGCTTGCTGGGTGAGGAAG+AGG | + | chr3.1:31321656-31321675 | MS.gene46990:CDS | 55.0% |
| !! | CTTGGGGCGGATTTTTGACC+TGG | - | chr3.1:31323265-31323284 | None:intergenic | 55.0% |
| !! | GGGAGTGGGTTTTCTTCGAC+GGG | - | chr3.1:31323587-31323606 | None:intergenic | 55.0% |
| AGGAAGGAAGTGGGAGAGCG+AGG | + | chr3.1:31319207-31319226 | MS.gene46990:CDS | 60.0% | |
| AGGAAGTGGGAGAGCGAGGA+CGG | + | chr3.1:31319211-31319230 | MS.gene46990:CDS | 60.0% | |
| AGTCACAGATGGCGTCACCC+GGG | + | chr3.1:31319504-31319523 | MS.gene46990:CDS | 60.0% | |
| CCCATCACTAGCAGAGGAGG+AGG | - | chr3.1:31320126-31320145 | None:intergenic | 60.0% | |
| CTCCCCATCACTAGCAGAGG+AGG | - | chr3.1:31320129-31320148 | None:intergenic | 60.0% | |
| CTGACGTGGAGGATCTTCGC+CGG | + | chr3.1:31318769-31318788 | MS.gene46990:CDS | 60.0% | |
| CTGCAGGATCTCTCACCGAG+AGG | + | chr3.1:31319903-31319922 | MS.gene46990:CDS | 60.0% | |
| CTTCGCCGGAAACATCGTGG+TGG | + | chr3.1:31318783-31318802 | MS.gene46990:CDS | 60.0% | |
| GAGAGCGAGGACGGTGATAC+CGG | + | chr3.1:31319220-31319239 | MS.gene46990:CDS | 60.0% | |
| GATCCTCCACGTCAGCTCCA+CGG | - | chr3.1:31318764-31318783 | None:intergenic | 60.0% | |
| GATGGCGTCACCCGGGTTTA+CGG | + | chr3.1:31319511-31319530 | MS.gene46990:CDS | 60.0% | |
| GTTCCCAACTTGCACCCCAG+TGG | + | chr3.1:31323613-31323632 | MS.gene46990:intron | 60.0% | |
| TCGGCCTGAACTTGACCTCG+TGG | + | chr3.1:31321403-31321422 | MS.gene46990:CDS | 60.0% | |
| GAAGAGAAGCGAGACCGCCG+TGG | + | chr3.1:31318744-31318763 | MS.gene46990:CDS | 65.0% | |
| AGACCGCCGTGGAGCTGACG+TGG | + | chr3.1:31318755-31318774 | MS.gene46990:CDS | 70.0% | |
| CACTGCGGCTGCTACCCTGC+AGG | + | chr3.1:31323443-31323462 | MS.gene46990:intron | 70.0% | |
| CCTCCACGTCAGCTCCACGG+CGG | - | chr3.1:31318761-31318780 | None:intergenic | 70.0% | |
| CTGCAGGGTAGCAGCCGCAG+TGG | - | chr3.1:31323445-31323464 | None:intergenic | 70.0% | |
| CCGCCGTGGAGCTGACGTGG+AGG | + | chr3.1:31318758-31318777 | MS.gene46990:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 31318684 | 31324502 | 31318684 | ID=MS.gene46990 |
| chr3.1 | mRNA | 31318684 | 31324502 | 31318684 | ID=MS.gene46990.t1;Parent=MS.gene46990 |
| chr3.1 | exon | 31318684 | 31319646 | 31318684 | ID=MS.gene46990.t1.exon1;Parent=MS.gene46990.t1 |
| chr3.1 | CDS | 31318684 | 31319646 | 31318684 | ID=cds.MS.gene46990.t1;Parent=MS.gene46990.t1 |
| chr3.1 | exon | 31319744 | 31319933 | 31319744 | ID=MS.gene46990.t1.exon2;Parent=MS.gene46990.t1 |
| chr3.1 | CDS | 31319744 | 31319933 | 31319744 | ID=cds.MS.gene46990.t1;Parent=MS.gene46990.t1 |
| chr3.1 | exon | 31320972 | 31321075 | 31320972 | ID=MS.gene46990.t1.exon3;Parent=MS.gene46990.t1 |
| chr3.1 | CDS | 31320972 | 31321075 | 31320972 | ID=cds.MS.gene46990.t1;Parent=MS.gene46990.t1 |
| chr3.1 | exon | 31321389 | 31321491 | 31321389 | ID=MS.gene46990.t1.exon4;Parent=MS.gene46990.t1 |
| chr3.1 | CDS | 31321389 | 31321491 | 31321389 | ID=cds.MS.gene46990.t1;Parent=MS.gene46990.t1 |
| chr3.1 | exon | 31321595 | 31321887 | 31321595 | ID=MS.gene46990.t1.exon5;Parent=MS.gene46990.t1 |
| chr3.1 | CDS | 31321595 | 31321887 | 31321595 | ID=cds.MS.gene46990.t1;Parent=MS.gene46990.t1 |
| chr3.1 | exon | 31321991 | 31322296 | 31321991 | ID=MS.gene46990.t1.exon6;Parent=MS.gene46990.t1 |
| chr3.1 | CDS | 31321991 | 31322296 | 31321991 | ID=cds.MS.gene46990.t1;Parent=MS.gene46990.t1 |
| chr3.1 | exon | 31324161 | 31324502 | 31324161 | ID=MS.gene46990.t1.exon7;Parent=MS.gene46990.t1 |
| chr3.1 | CDS | 31324161 | 31324502 | 31324161 | ID=cds.MS.gene46990.t1;Parent=MS.gene46990.t1 |
| Gene Sequence |
| Protein sequence |
