Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47583.t1 | RHN62344.1 | 86.3 | 520 | 65 | 2 | 1 | 519 | 1 | 515 | 7.50E-151 | 544.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47583.t1 | O23305 | 41.3 | 172 | 92 | 3 | 6 | 177 | 2 | 164 | 4.0e-28 | 127.9 |
| MS.gene47583.t1 | O23305 | 45.5 | 55 | 29 | 1 | 451 | 505 | 320 | 373 | 2.4e-04 | 48.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47583.t1 | A0A396IDM1 | 86.3 | 520 | 65 | 2 | 1 | 519 | 1 | 515 | 5.4e-151 | 544.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049989 | MS.gene47583 | 0.830277 | 3.22E-55 | -1.69E-46 |
| MS.gene050297 | MS.gene47583 | 0.821265 | 4.43E-53 | -1.69E-46 |
| MS.gene05124 | MS.gene47583 | 0.820589 | 6.33E-53 | -1.69E-46 |
| MS.gene052143 | MS.gene47583 | 0.824352 | 8.46E-54 | -1.69E-46 |
| MS.gene052367 | MS.gene47583 | 0.805061 | 1.60E-49 | -1.69E-46 |
| MS.gene053348 | MS.gene47583 | 0.801873 | 7.33E-49 | -1.69E-46 |
| MS.gene053416 | MS.gene47583 | 0.825488 | 4.56E-54 | -1.69E-46 |
| MS.gene053417 | MS.gene47583 | 0.82348 | 1.35E-53 | -1.69E-46 |
| MS.gene054643 | MS.gene47583 | 0.813629 | 2.32E-51 | -1.69E-46 |
| MS.gene054999 | MS.gene47583 | 0.810186 | 1.31E-50 | -1.69E-46 |
| MS.gene055957 | MS.gene47583 | 0.8111 | 8.29E-51 | -1.69E-46 |
| MS.gene056041 | MS.gene47583 | 0.814317 | 1.64E-51 | -1.69E-46 |
| MS.gene05640 | MS.gene47583 | 0.807737 | 4.37E-50 | -1.69E-46 |
| MS.gene056526 | MS.gene47583 | 0.84716 | 1.38E-59 | -1.69E-46 |
| MS.gene059553 | MS.gene47583 | 0.813754 | 2.18E-51 | -1.69E-46 |
| MS.gene060473 | MS.gene47583 | 0.828517 | 8.61E-55 | -1.69E-46 |
| MS.gene060565 | MS.gene47583 | 0.838098 | 3.52E-57 | -1.69E-46 |
| MS.gene06057 | MS.gene47583 | 0.811686 | 6.18E-51 | -1.69E-46 |
| MS.gene06093 | MS.gene47583 | 0.807607 | 4.65E-50 | -1.69E-46 |
| MS.gene061099 | MS.gene47583 | 0.800179 | 1.63E-48 | -1.69E-46 |
| MS.gene061260 | MS.gene47583 | 0.816022 | 6.85E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47583.t1 | MTR_8g069140 | 87.524 | 521 | 57 | 5 | 1 | 519 | 1 | 515 | 0.0 | 833 |
| MS.gene47583.t1 | MTR_4g088235 | 87.140 | 521 | 59 | 5 | 1 | 519 | 1 | 515 | 0.0 | 832 |
| MS.gene47583.t1 | MTR_3g092440 | 72.899 | 476 | 63 | 9 | 48 | 519 | 20 | 433 | 0.0 | 590 |
| MS.gene47583.t1 | MTR_4g088240 | 63.043 | 138 | 48 | 3 | 1 | 137 | 1 | 136 | 3.79e-47 | 167 |
| MS.gene47583.t1 | MTR_4g088240 | 71.579 | 95 | 23 | 2 | 423 | 516 | 183 | 274 | 8.95e-33 | 127 |
| MS.gene47583.t1 | MTR_3g028140 | 55.932 | 59 | 24 | 1 | 541 | 597 | 320 | 378 | 4.59e-11 | 66.2 |
| MS.gene47583.t1 | MTR_3g028140 | 55.932 | 59 | 24 | 1 | 541 | 597 | 320 | 378 | 5.91e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47583.t1 | AT4G14490 | 56.731 | 104 | 45 | 0 | 6 | 109 | 2 | 105 | 6.05e-34 | 134 |
| MS.gene47583.t1 | AT3G02400 | 58.252 | 103 | 43 | 0 | 6 | 108 | 2 | 104 | 2.78e-31 | 129 |
| MS.gene47583.t1 | AT3G02400 | 58.252 | 103 | 43 | 0 | 6 | 108 | 2 | 104 | 3.41e-31 | 128 |
Find 169 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCATTTCAATTCCGGTAAT+TGG | 0.135877 | 4.3:+25190188 | MS.gene47583:CDS |
| TGATTCTGCTGATGTGAATT+TGG | 0.240026 | 4.3:+25190555 | MS.gene47583:CDS |
| GTGGTAAAAGTGTTAAATTT+AGG | 0.256360 | 4.3:+25190413 | MS.gene47583:CDS |
| TGGTAAAAGTGTTAAATTTA+GGG | 0.262471 | 4.3:+25190414 | MS.gene47583:CDS |
| GATTTGGAGAAGATGAATTT+AGG | 0.263231 | 4.3:+25191402 | MS.gene47583:CDS |
| CATAGGTTTATCTTCTACTA+TGG | 0.263666 | 4.3:-25190371 | None:intergenic |
| GTTTCATCATGTATCTGTTT+TGG | 0.281623 | 4.3:-25191456 | None:intergenic |
| AGGTGAGTGGTTTGATTTCT+TGG | 0.284800 | 4.3:+25191422 | MS.gene47583:CDS |
| CTCGTAACCTTCATCGGTTC+AGG | 0.305130 | 4.3:-25190505 | None:intergenic |
| GAATTTGAGGAATAAGAAAA+TGG | 0.307967 | 4.3:+25190837 | MS.gene47583:CDS |
| TGATTCGAGTAACGGGGATT+TGG | 0.318970 | 4.3:+25190759 | MS.gene47583:CDS |
| TGAATTGAGTGTTGGAGATT+TGG | 0.321055 | 4.3:+25190867 | MS.gene47583:CDS |
| TCAATCTCCTCTGTTGAAAC+AGG | 0.322368 | 4.3:+25192230 | MS.gene47583:CDS |
| GGTTTCCGTAGGGTTACTTT+GGG | 0.323544 | 4.3:-25190350 | None:intergenic |
| CTCACTATCCATTTCAATTC+CGG | 0.326349 | 4.3:+25190181 | MS.gene47583:CDS |
| TGCTAAAGGAAAGGAGAAAT+TGG | 0.331726 | 4.3:+25191098 | MS.gene47583:CDS |
| GGATGAGAATTGGCCTGATT+TGG | 0.337680 | 4.3:+25191386 | MS.gene47583:CDS |
| TGCAGTTGAGATTTGTGATT+CGG | 0.346144 | 4.3:+25190633 | MS.gene47583:CDS |
| ACAAGGAATGCGAAGAATAA+AGG | 0.353579 | 4.3:+25190934 | MS.gene47583:CDS |
| TCCAATTACCGGAATTGAAA+TGG | 0.367892 | 4.3:-25190189 | None:intergenic |
| ACTAAGATTGAACACAAAAC+TGG | 0.379419 | 4.3:+25192116 | MS.gene47583:CDS |
| AGTAACTTCACCGATCTTAA+TGG | 0.379519 | 4.3:-25190302 | None:intergenic |
| AAGTGTTAAATTTAGGGTTC+CGG | 0.384136 | 4.3:+25190420 | MS.gene47583:CDS |
| CAAGGAATGCGAAGAATAAA+GGG | 0.387553 | 4.3:+25190935 | MS.gene47583:CDS |
| GCAGTTGAGATTTGTGATTC+GGG | 0.395223 | 4.3:+25190634 | MS.gene47583:CDS |
| TGGTGGATTCGGGTTTGAAT+AGG | 0.396059 | 4.3:-25190090 | None:intergenic |
| ATTTGAATGGGGATGAGAAT+TGG | 0.396400 | 4.3:+25191376 | MS.gene47583:CDS |
| TCGTCACCAACGCACTCTTC+CGG | 0.397410 | 4.3:-25191216 | None:intergenic |
| AAATTCATCTTCTCCAAATC+AGG | 0.398213 | 4.3:-25191399 | None:intergenic |
| CCATCACCAACACGCTCTTC+TGG | 0.402421 | 4.3:-25191168 | None:intergenic |
| TGGATTCGGGTTTGAATAGG+TGG | 0.412924 | 4.3:-25190087 | None:intergenic |
| TGATTCGGGTAATGGTGATT+TGG | 0.414842 | 4.3:+25190648 | MS.gene47583:CDS |
| AGGTTTGTGATTCGAGTAAC+GGG | 0.417407 | 4.3:+25190752 | MS.gene47583:CDS |
| ATCTGTGAGAATCCAATTAC+CGG | 0.423058 | 4.3:-25190200 | None:intergenic |
| TGGTTTCCGTAGGGTTACTT+TGG | 0.426738 | 4.3:-25190351 | None:intergenic |
| CTGAGATGAAAAGGAGTATT+CGG | 0.427337 | 4.3:-25190268 | None:intergenic |
| AAAGGAGTATTCGGAGGAAC+AGG | 0.428281 | 4.3:-25190259 | None:intergenic |
| AATTTGAGGAATAAGAAAAT+GGG | 0.432307 | 4.3:+25190838 | MS.gene47583:CDS |
| GGAAATACCTGGATCTTTGA+TGG | 0.433151 | 4.3:-25190149 | None:intergenic |
| GAAAACAAGGGGTGGTGCTA+AGG | 0.440899 | 4.3:+25191014 | MS.gene47583:CDS |
| GGAGCTGATCTGAGAAGTTC+CGG | 0.441875 | 4.3:-25192207 | None:intergenic |
| GAGATTTGTGATTCGGGTAA+TGG | 0.443798 | 4.3:+25190640 | MS.gene47583:CDS |
| AGTAGAAGATAAACCTATGA+AGG | 0.445778 | 4.3:+25190375 | MS.gene47583:CDS |
| CCCGAATCCACCATCAAAAT+CGG | 0.448567 | 4.3:+25190100 | MS.gene47583:CDS |
| TAAAGAGAAGGAGAAATTAC+CGG | 0.453884 | 4.3:+25191197 | MS.gene47583:CDS |
| TGAGGGTGACAAGGAATTTG+AGG | 0.455722 | 4.3:+25190824 | MS.gene47583:CDS |
| GGAGAGTGTGAAAGAGAAAG+TGG | 0.459626 | 4.3:+25190780 | MS.gene47583:CDS |
| GACGTACTCCCGGAGTCTCT+CGG | 0.467250 | 4.3:-25191511 | None:intergenic |
| ATCATAGTTCGTGGGGTGAC+CGG | 0.469006 | 4.3:+25192188 | MS.gene47583:CDS |
| GGTTTCTCCCTTACGTGGAC+CGG | 0.470919 | 4.3:-25190065 | None:intergenic |
| ATTCCTCGCCGGTCCACGTA+AGG | 0.474482 | 4.3:+25190057 | MS.gene47583:CDS |
| CCAGAAGAGCGTGTTGGTGA+TGG | 0.475527 | 4.3:+25191168 | MS.gene47583:CDS |
| TGAGTGACTGCTAGTGCATC+AGG | 0.478244 | 4.3:+25191990 | MS.gene47583:intron |
| GAATAAAGGGGTTGTGATTG+AGG | 0.479194 | 4.3:+25190948 | MS.gene47583:CDS |
| CCTGATGTTGATAATTAAGT+TGG | 0.480681 | 4.3:-25192033 | None:intergenic |
| GAAGATTTGAGCTTGGTGAA+TGG | 0.484158 | 4.3:+25190970 | MS.gene47583:CDS |
| AAAACAAGGGGTGGTGCTAA+GGG | 0.484261 | 4.3:+25191015 | MS.gene47583:CDS |
| ATTGATGAAGTTAACAAGGA+TGG | 0.484506 | 4.3:-25190326 | None:intergenic |
| TTACGAGGAATACGCGGAGC+AGG | 0.485036 | 4.3:+25190521 | MS.gene47583:CDS |
| TGCTAGTGCATCAGGTGATC+AGG | 0.488421 | 4.3:+25191998 | MS.gene47583:intron |
| GAACCATCGCTGAGATGAAA+AGG | 0.497457 | 4.3:-25190277 | None:intergenic |
| TCTTCTACTATGGTTTCCGT+AGG | 0.497993 | 4.3:-25190361 | None:intergenic |
| ATGTATCAGATTCAGAAAGC+TGG | 0.501915 | 4.3:+25191537 | MS.gene47583:CDS |
| TGGTGATTTGGATGATGTGC+AGG | 0.501974 | 4.3:+25190660 | MS.gene47583:CDS |
| CCAACTTAATTATCAACATC+AGG | 0.502304 | 4.3:+25192033 | MS.gene47583:CDS |
| GGATTCGGGTTTGAATAGGT+GGG | 0.504613 | 4.3:-25190086 | None:intergenic |
| ATCAATGTATCTTTAAAGAA+CGG | 0.507528 | 4.3:+25192066 | MS.gene47583:CDS |
| AAAACAGATACATGATGAAA+CGG | 0.510214 | 4.3:+25191458 | MS.gene47583:CDS |
| TGTGTTGGTGATGGAGATGA+TGG | 0.513294 | 4.3:+25191321 | MS.gene47583:CDS |
| TAAGGGGAAGAAGAAATTGC+AGG | 0.513857 | 4.3:+25191032 | MS.gene47583:CDS |
| TGTTTCAACAGAGGAGATTG+AGG | 0.515589 | 4.3:-25192228 | None:intergenic |
| CTTTAAAGAACGGATTGTGA+TGG | 0.520948 | 4.3:+25192076 | MS.gene47583:CDS |
| CTTGTCATCCTCACACTCCT+CGG | 0.521001 | 4.3:-25190916 | None:intergenic |
| GATTCTAATTCAGATAATGA+AGG | 0.523701 | 4.3:+25192149 | MS.gene47583:CDS |
| AACAGGTTTGGTGTCTAAAA+CGG | 0.523792 | 4.3:-25190242 | None:intergenic |
| TTTAAAGAACGGATTGTGAT+GGG | 0.526047 | 4.3:+25192077 | MS.gene47583:CDS |
| GAGGTTTGTGATTCGAGTAA+CGG | 0.526278 | 4.3:+25190751 | MS.gene47583:CDS |
| GAGGAAGAGTGTGTTGGTGA+TGG | 0.527304 | 4.3:+25191120 | MS.gene47583:CDS |
| AGGTGTTTGGTGGAAATACC+TGG | 0.527977 | 4.3:-25190160 | None:intergenic |
| GTATTCCTCGTAACCTTCAT+CGG | 0.528796 | 4.3:-25190511 | None:intergenic |
| AAGTGAAGAAGAAGAATGTG+AGG | 0.531849 | 4.3:+25190806 | MS.gene47583:CDS |
| GAAATACCTGGATCTTTGAT+GGG | 0.532079 | 4.3:-25190148 | None:intergenic |
| CAGGAAGAGATTGTTGGTGA+TGG | 0.532227 | 4.3:+25191051 | MS.gene47583:CDS |
| AACCTCCCCATCAAAGATCC+AGG | 0.532781 | 4.3:+25190142 | MS.gene47583:CDS |
| AGAAGAATGTGAGGGTGACA+AGG | 0.532966 | 4.3:+25190815 | MS.gene47583:CDS |
| GAGAATTGTGATGATGCTAA+AGG | 0.541257 | 4.3:+25191084 | MS.gene47583:CDS |
| ATCCACCATCAAAATCGGTC+GGG | 0.543736 | 4.3:+25190105 | MS.gene47583:CDS |
| AAATTGCAGGAAGAGATTGT+TGG | 0.543947 | 4.3:+25191045 | MS.gene47583:CDS |
| AGGAATTGAAGTGTGAGAGA+TGG | 0.546456 | 4.3:-25190040 | None:intergenic |
| TGGTGTGAAGGAGAAGGTGG+AGG | 0.547202 | 4.3:+25190891 | MS.gene47583:CDS |
| GATGAAGATGAAATGTTGAA+TGG | 0.547309 | 4.3:+25190454 | MS.gene47583:CDS |
| AGTATTCGGAGGAACAGGTT+TGG | 0.547548 | 4.3:-25190254 | None:intergenic |
| CTTCTACTATGGTTTCCGTA+GGG | 0.549514 | 4.3:-25190360 | None:intergenic |
| ATGGATAGTGAGGTGTTTGG+TGG | 0.549947 | 4.3:-25190170 | None:intergenic |
| TGATGGAGATGATAAAGAAA+AGG | 0.550272 | 4.3:+25191137 | MS.gene47583:CDS |
| CAAGAAAAGTGTGTTGGTGA+TGG | 0.550772 | 4.3:+25191312 | MS.gene47583:CDS |
| GGGGTTTCTGAATTGAGTGT+TGG | 0.552207 | 4.3:+25190859 | MS.gene47583:CDS |
| TGATGGAGAAGATAAAGAGA+AGG | 0.555886 | 4.3:+25191185 | MS.gene47583:CDS |
| TGATGAAGAAGATAAAGAGA+AGG | 0.556018 | 4.3:+25191281 | MS.gene47583:CDS |
| GGATCGACCTGAACCGATGA+AGG | 0.556237 | 4.3:+25190498 | MS.gene47583:CDS |
| GAATAAGAAGAATGCTGTTG+AGG | 0.559203 | 4.3:+25190732 | MS.gene47583:CDS |
| TGGAGGAGCCGAGGAGTGTG+AGG | 0.560610 | 4.3:+25190908 | MS.gene47583:CDS |
| TACCTGGATCTTTGATGGGG+AGG | 0.560776 | 4.3:-25190144 | None:intergenic |
| GATTGAGGAAGATTTGAGCT+TGG | 0.563165 | 4.3:+25190963 | MS.gene47583:CDS |
| AGGAGAAGGTGGAGGAGCCG+AGG | 0.563651 | 4.3:+25190899 | MS.gene47583:CDS |
| CAATCTCCTCTGTTGAAACA+GGG | 0.564834 | 4.3:+25192231 | MS.gene47583:CDS |
| GAGATTGTTGGTGATGGAGA+TGG | 0.565638 | 4.3:+25191057 | MS.gene47583:CDS |
| TGGAGATTTGGATGGTGTGA+AGG | 0.565692 | 4.3:+25190879 | MS.gene47583:CDS |
| AGAAGATGAATTTAGGTGAG+TGG | 0.565794 | 4.3:+25191409 | MS.gene47583:CDS |
| TCTTCATCAATACTCTGTAC+CGG | 0.566094 | 4.3:-25190439 | None:intergenic |
| TTGTGATGATGCTAAAGGAA+AGG | 0.566732 | 4.3:+25191089 | MS.gene47583:CDS |
| TTGAATGGTGATGATGAAGA+TGG | 0.567085 | 4.3:+25190469 | MS.gene47583:CDS |
| GATGTAGACATCATAGTTCG+TGG | 0.567102 | 4.3:+25192179 | MS.gene47583:CDS |
| GGATGATGTGCAGGAGAAGG+TGG | 0.567191 | 4.3:+25190669 | MS.gene47583:CDS |
| GGATGGTGTGAAGGAGAAGG+TGG | 0.569564 | 4.3:+25190888 | MS.gene47583:CDS |
| GAAATGGATAGTGAGGTGTT+TGG | 0.570327 | 4.3:-25190173 | None:intergenic |
| ATGTAGACATCATAGTTCGT+GGG | 0.570716 | 4.3:+25192180 | MS.gene47583:CDS |
| CTCACACTTCAATTCCTCGC+CGG | 0.576251 | 4.3:+25190046 | MS.gene47583:CDS |
| AGAAGAATGTGAGGGTGACA+AGG | 0.576462 | 4.3:+25190701 | MS.gene47583:CDS |
| ATTTGAGGAATAAGAAAATG+GGG | 0.577941 | 4.3:+25190839 | MS.gene47583:CDS |
| TAAAGGAAAGGAGAAATTGG+AGG | 0.581664 | 4.3:+25191101 | MS.gene47583:CDS |
| TTATCTGAATTAGAATCAGA+AGG | 0.582228 | 4.3:-25192143 | None:intergenic |
| CGAGGAGTGTGAGGATGACA+AGG | 0.584161 | 4.3:+25190917 | MS.gene47583:CDS |
| CGAAGAATGTGAGGGTGACG+AGG | 0.585927 | 4.3:+25190590 | MS.gene47583:CDS |
| TTGAGTGTTGGAGATTTGGA+TGG | 0.587988 | 4.3:+25190871 | MS.gene47583:CDS |
| AGGTGGGTTTCTCCCTTACG+TGG | 0.589154 | 4.3:-25190070 | None:intergenic |
| AAATCACAAGAAAAGTGTGT+TGG | 0.591822 | 4.3:+25191306 | MS.gene47583:CDS |
| TTTGGATGGTGTGAAGGAGA+AGG | 0.592111 | 4.3:+25190885 | MS.gene47583:CDS |
| CGGAATTGAAATGGATAGTG+AGG | 0.592334 | 4.3:-25190180 | None:intergenic |
| GGGGATTGATGAAGTTAACA+AGG | 0.594113 | 4.3:-25190330 | None:intergenic |
| TTTGGATGATGTGCAGGAGA+AGG | 0.594632 | 4.3:+25190666 | MS.gene47583:CDS |
| TTCCTCGCCGGTCCACGTAA+GGG | 0.599574 | 4.3:+25190058 | MS.gene47583:CDS |
| TTTGAGCTTGGTGAATGGAG+TGG | 0.602709 | 4.3:+25190975 | MS.gene47583:CDS |
| TGATGATGAAGATGGAATTG+TGG | 0.602937 | 4.3:+25190477 | MS.gene47583:CDS |
| AATTTACCAGAAGAGCGTGT+TGG | 0.606294 | 4.3:+25191162 | MS.gene47583:CDS |
| CTCCCTTACGTGGACCGGCG+AGG | 0.606537 | 4.3:-25190060 | None:intergenic |
| ACAGATCTCGATTCTTCTAA+CGG | 0.609144 | 4.3:+25190217 | MS.gene47583:CDS |
| AAATTACCGGAAGAGTGCGT+TGG | 0.609976 | 4.3:+25191210 | MS.gene47583:CDS |
| GTAGAAGATAAACCTATGAA+GGG | 0.610432 | 4.3:+25190376 | MS.gene47583:CDS |
| AATCCACCATCAAAATCGGT+CGG | 0.610443 | 4.3:+25190104 | MS.gene47583:CDS |
| GAGTGTGAAAGAGAAAGTGG+AGG | 0.615994 | 4.3:+25190783 | MS.gene47583:CDS |
| GATACATTATGACGTACTCC+CGG | 0.616310 | 4.3:-25191521 | None:intergenic |
| TAAAATGGAAGAACAACAAG+TGG | 0.617661 | 4.3:+25190015 | None:intergenic |
| GATGGTTCCACCATTAAGAT+CGG | 0.618053 | 4.3:+25190292 | MS.gene47583:CDS |
| GTTTCCGTAGGGTTACTTTG+GGG | 0.622007 | 4.3:-25190349 | None:intergenic |
| TTTGAGGAATAAGAAAATGG+GGG | 0.622895 | 4.3:+25190840 | MS.gene47583:CDS |
| AAACAAGGGGTGGTGCTAAG+GGG | 0.623711 | 4.3:+25191016 | MS.gene47583:CDS |
| CAATCCCCAAAGTAACCCTA+CGG | 0.625349 | 4.3:+25190345 | MS.gene47583:CDS |
| CTGAACCGATGAAGGTTACG+AGG | 0.630587 | 4.3:+25190506 | MS.gene47583:CDS |
| TGATGGGGAGGTTGTTGCCG+CGG | 0.633183 | 4.3:-25190132 | None:intergenic |
| AGTGAAGAAGAAGAATGTGA+GGG | 0.634672 | 4.3:+25190807 | MS.gene47583:CDS |
| AAGAAGTGAAGAAGAATGTG+AGG | 0.639076 | 4.3:+25190692 | MS.gene47583:CDS |
| AACTTCACCGATCTTAATGG+TGG | 0.642883 | 4.3:-25190299 | None:intergenic |
| AACAACTAACTAAAGCCCGC+AGG | 0.644640 | 4.3:-25192809 | None:intergenic |
| CTGTAGTATCGAAGAATGTG+AGG | 0.646172 | 4.3:+25190581 | MS.gene47583:CDS |
| CACTGCCCCTGTTTCAACAG+AGG | 0.649003 | 4.3:-25192237 | None:intergenic |
| CTACATATACTAGCATTCAG+TGG | 0.652902 | 4.3:-25191565 | None:intergenic |
| CAGGGGCAGTGATTCACACA+TGG | 0.654131 | 4.3:+25192249 | MS.gene47583:CDS |
| AATCTCCTCTGTTGAAACAG+GGG | 0.654154 | 4.3:+25192232 | MS.gene47583:CDS |
| TGAAGGTTACGAGGAATACG+CGG | 0.654682 | 4.3:+25190515 | MS.gene47583:CDS |
| AAAATCGGTCGGGTCATCCG+CGG | 0.657840 | 4.3:+25190115 | MS.gene47583:CDS |
| AAATACCTGGATCTTTGATG+GGG | 0.678030 | 4.3:-25190147 | None:intergenic |
| AGATGAAAAGGAGTATTCGG+AGG | 0.680462 | 4.3:-25190265 | None:intergenic |
| TGTAGACATCATAGTTCGTG+GGG | 0.690833 | 4.3:+25192181 | MS.gene47583:CDS |
| GGTTTGTGATTCGAGTAACG+GGG | 0.696279 | 4.3:+25190753 | MS.gene47583:CDS |
| AGAAGTGAAGAAGAATGTGA+GGG | 0.706522 | 4.3:+25190693 | MS.gene47583:CDS |
| AAGGAATGCGAAGAATAAAG+GGG | 0.713160 | 4.3:+25190936 | MS.gene47583:CDS |
| AAATTGGAGGAAGAGTGTGT+TGG | 0.722760 | 4.3:+25191114 | MS.gene47583:CDS |
| TGTAGTATCGAAGAATGTGA+GGG | 0.756754 | 4.3:+25190582 | MS.gene47583:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGTAAAATTGTTATTAACA+AGG | - | chr4.3:25191785-25191804 | None:intergenic | 15.0% |
| !!! | TAATAATATGATTAGTTCTT+GGG | + | chr4.3:25192473-25192492 | MS.gene47583:intron | 15.0% |
| !!! | TTAATAATATGATTAGTTCT+TGG | + | chr4.3:25192472-25192491 | MS.gene47583:intron | 15.0% |
| !! | AAAGAAAAAGAGAATTTGAA+TGG | + | chr4.3:25191363-25191382 | MS.gene47583:CDS | 20.0% |
| !! | AAGAAAAAGAGAATTTGAAT+GGG | + | chr4.3:25191364-25191383 | MS.gene47583:CDS | 20.0% |
| !! | AATTTGAGGAATAAGAAAAT+GGG | + | chr4.3:25190838-25190857 | MS.gene47583:CDS | 20.0% |
| !! | TAAAGAAAAAGAGAAATTAC+AGG | + | chr4.3:25191245-25191264 | MS.gene47583:CDS | 20.0% |
| !!! | ATCAATGTATCTTTAAAGAA+CGG | + | chr4.3:25192066-25192085 | MS.gene47583:CDS | 20.0% |
| !!! | TGGTAAAAGTGTTAAATTTA+GGG | + | chr4.3:25190414-25190433 | MS.gene47583:CDS | 20.0% |
| !!! | TTAATGATTTTTGCTGTTAT+TGG | + | chr4.3:25191943-25191962 | MS.gene47583:intron | 20.0% |
| ! | AAAACAGATACATGATGAAA+CGG | + | chr4.3:25191458-25191477 | MS.gene47583:CDS | 25.0% |
| ! | AATAAGAATTGAAAGATGCA+AGG | - | chr4.3:25191760-25191779 | None:intergenic | 25.0% |
| ! | AGAAAAAGAGAATTTGAATG+GGG | + | chr4.3:25191365-25191384 | MS.gene47583:CDS | 25.0% |
| ! | ATAAGAATTGAAAGATGCAA+GGG | - | chr4.3:25191759-25191778 | None:intergenic | 25.0% |
| ! | ATGTTGAGAAAAAGAAAACA+AGG | + | chr4.3:25191001-25191020 | MS.gene47583:CDS | 25.0% |
| ! | ATTTGAGGAATAAGAAAATG+GGG | + | chr4.3:25190839-25190858 | MS.gene47583:CDS | 25.0% |
| ! | GAATTTGAGGAATAAGAAAA+TGG | + | chr4.3:25190837-25190856 | MS.gene47583:CDS | 25.0% |
| ! | GATTCTAATTCAGATAATGA+AGG | + | chr4.3:25192149-25192168 | MS.gene47583:CDS | 25.0% |
| ! | TGTAATTATTACTAGAAGCA+TGG | + | chr4.3:25191841-25191860 | MS.gene47583:intron | 25.0% |
| ! | TGTTGAGAAAAAGAAAACAA+GGG | + | chr4.3:25191002-25191021 | MS.gene47583:CDS | 25.0% |
| ! | TTATCTGAATTAGAATCAGA+AGG | - | chr4.3:25192146-25192165 | None:intergenic | 25.0% |
| ! | TTCACTAAAAGCAATAATAG+CGG | - | chr4.3:25191704-25191723 | None:intergenic | 25.0% |
| ! | TTTCTGTTAATGTAAATACC+TGG | + | chr4.3:25192371-25192390 | MS.gene47583:intron | 25.0% |
| !! | ATAACAATTTTACTTCCTTG+TGG | + | chr4.3:25191790-25191809 | MS.gene47583:intron | 25.0% |
| !! | ATTTTATGACAAGTGTTAAC+AGG | - | chr4.3:25192343-25192362 | None:intergenic | 25.0% |
| !! | GAATCATCTAATTTGTAAGT+TGG | + | chr4.3:25191920-25191939 | MS.gene47583:intron | 25.0% |
| !!! | GTGGTAAAAGTGTTAAATTT+AGG | + | chr4.3:25190413-25190432 | MS.gene47583:CDS | 25.0% |
| AAACCTATGAAGGGTAAAAA+AGG | + | chr4.3:25190385-25190404 | MS.gene47583:CDS | 30.0% | |
| AAATTCATCTTCTCCAAATC+AGG | - | chr4.3:25191402-25191421 | None:intergenic | 30.0% | |
| AACCTATGAAGGGTAAAAAA+GGG | + | chr4.3:25190386-25190405 | MS.gene47583:CDS | 30.0% | |
| AATAGCGGTACAATATATTC+TGG | - | chr4.3:25191689-25191708 | None:intergenic | 30.0% | |
| ACTAAGATTGAACACAAAAC+TGG | + | chr4.3:25192116-25192135 | MS.gene47583:CDS | 30.0% | |
| ACTGCTGTATTATATGCAAT+AGG | + | chr4.3:25191889-25191908 | MS.gene47583:intron | 30.0% | |
| AGTAGAAGATAAACCTATGA+AGG | + | chr4.3:25190375-25190394 | MS.gene47583:CDS | 30.0% | |
| ATTGATGAAGTTAACAAGGA+TGG | - | chr4.3:25190329-25190348 | None:intergenic | 30.0% | |
| CATAGGTTTATCTTCTACTA+TGG | - | chr4.3:25190374-25190393 | None:intergenic | 30.0% | |
| CCAACTTAATTATCAACATC+AGG | + | chr4.3:25192033-25192052 | MS.gene47583:CDS | 30.0% | |
| GATGAAGATGAAATGTTGAA+TGG | + | chr4.3:25190454-25190473 | MS.gene47583:CDS | 30.0% | |
| GATTTGGAGAAGATGAATTT+AGG | + | chr4.3:25191402-25191421 | MS.gene47583:CDS | 30.0% | |
| GTAGAAGATAAACCTATGAA+GGG | + | chr4.3:25190376-25190395 | MS.gene47583:CDS | 30.0% | |
| GTTGAGAAAAAGAAAACAAG+GGG | + | chr4.3:25191003-25191022 | MS.gene47583:CDS | 30.0% | |
| TAAAGAGAAGGAGAAATTAC+CGG | + | chr4.3:25191197-25191216 | MS.gene47583:CDS | 30.0% | |
| TGATGAAGAAGATAAAGAGA+AGG | + | chr4.3:25191281-25191300 | MS.gene47583:CDS | 30.0% | |
| TGATGGAGATGATAAAGAAA+AGG | + | chr4.3:25191137-25191156 | MS.gene47583:CDS | 30.0% | |
| TTTGAGGAATAAGAAAATGG+GGG | + | chr4.3:25190840-25190859 | MS.gene47583:CDS | 30.0% | |
| ! | AAATCACAAGAAAAGTGTGT+TGG | + | chr4.3:25191306-25191325 | MS.gene47583:CDS | 30.0% |
| ! | AAGTGTTAAATTTAGGGTTC+CGG | + | chr4.3:25190420-25190439 | MS.gene47583:CDS | 30.0% |
| ! | CATTAGCACAACTGTTATTT+AGG | + | chr4.3:25191609-25191628 | MS.gene47583:intron | 30.0% |
| ! | GTTTCATCATGTATCTGTTT+TGG | - | chr4.3:25191459-25191478 | None:intergenic | 30.0% |
| ! | TAATATGATTAGTTCTTGGG+AGG | + | chr4.3:25192476-25192495 | MS.gene47583:intron | 30.0% |
| !! | CCTGATGTTGATAATTAAGT+TGG | - | chr4.3:25192036-25192055 | None:intergenic | 30.0% |
| !! | TTTAAAGAACGGATTGTGAT+GGG | + | chr4.3:25192077-25192096 | MS.gene47583:CDS | 30.0% |
| !!! | ATTTTTGCTGTTATTGGATG+AGG | + | chr4.3:25191949-25191968 | MS.gene47583:intron | 30.0% |
| AAATACCTGGATCTTTGATG+GGG | - | chr4.3:25190150-25190169 | None:intergenic | 35.0% | |
| AAATTGCAGGAAGAGATTGT+TGG | + | chr4.3:25191045-25191064 | MS.gene47583:CDS | 35.0% | |
| AAGAAGTGAAGAAGAATGTG+AGG | + | chr4.3:25190692-25190711 | MS.gene47583:CDS | 35.0% | |
| AAGGAATGCGAAGAATAAAG+GGG | + | chr4.3:25190936-25190955 | MS.gene47583:CDS | 35.0% | |
| AAGGGTAAAAAAGGGAATAG+TGG | + | chr4.3:25190394-25190413 | MS.gene47583:CDS | 35.0% | |
| AAGTGAAGAAGAAGAATGTG+AGG | + | chr4.3:25190806-25190825 | MS.gene47583:CDS | 35.0% | |
| ACAAGGAATGCGAAGAATAA+AGG | + | chr4.3:25190934-25190953 | MS.gene47583:CDS | 35.0% | |
| ACAGATCTCGATTCTTCTAA+CGG | + | chr4.3:25190217-25190236 | MS.gene47583:CDS | 35.0% | |
| AGAAGATGAATTTAGGTGAG+TGG | + | chr4.3:25191409-25191428 | MS.gene47583:CDS | 35.0% | |
| AGAAGTGAAGAAGAATGTGA+GGG | + | chr4.3:25190693-25190712 | MS.gene47583:CDS | 35.0% | |
| AGTAACTTCACCGATCTTAA+TGG | - | chr4.3:25190305-25190324 | None:intergenic | 35.0% | |
| AGTGAAGAAGAAGAATGTGA+GGG | + | chr4.3:25190807-25190826 | MS.gene47583:CDS | 35.0% | |
| ATAATATCAGGAACCAAGAC+AGG | + | chr4.3:25192402-25192421 | MS.gene47583:intron | 35.0% | |
| ATCTGTGAGAATCCAATTAC+CGG | - | chr4.3:25190203-25190222 | None:intergenic | 35.0% | |
| ATGTAGACATCATAGTTCGT+GGG | + | chr4.3:25192180-25192199 | MS.gene47583:CDS | 35.0% | |
| ATGTATCAGATTCAGAAAGC+TGG | + | chr4.3:25191537-25191556 | MS.gene47583:CDS | 35.0% | |
| ATTTGAATGGGGATGAGAAT+TGG | + | chr4.3:25191376-25191395 | MS.gene47583:CDS | 35.0% | |
| CAAGGAATGCGAAGAATAAA+GGG | + | chr4.3:25190935-25190954 | MS.gene47583:CDS | 35.0% | |
| CTACATATACTAGCATTCAG+TGG | - | chr4.3:25191568-25191587 | None:intergenic | 35.0% | |
| CTCACTATCCATTTCAATTC+CGG | + | chr4.3:25190181-25190200 | MS.gene47583:CDS | 35.0% | |
| CTGTATTATATGCAATAGGC+TGG | + | chr4.3:25191893-25191912 | MS.gene47583:intron | 35.0% | |
| GAAATACCTGGATCTTTGAT+GGG | - | chr4.3:25190151-25190170 | None:intergenic | 35.0% | |
| GAATAAGAAGAATGCTGTTG+AGG | + | chr4.3:25190732-25190751 | MS.gene47583:CDS | 35.0% | |
| TAAAGGAAAGGAGAAATTGG+AGG | + | chr4.3:25191101-25191120 | MS.gene47583:CDS | 35.0% | |
| TCCAATTACCGGAATTGAAA+TGG | - | chr4.3:25190192-25190211 | None:intergenic | 35.0% | |
| TCCATTTCAATTCCGGTAAT+TGG | + | chr4.3:25190188-25190207 | MS.gene47583:CDS | 35.0% | |
| TCTTCATCAATACTCTGTAC+CGG | - | chr4.3:25190442-25190461 | None:intergenic | 35.0% | |
| TGATGGAGAAGATAAAGAGA+AGG | + | chr4.3:25191185-25191204 | MS.gene47583:CDS | 35.0% | |
| TGATTCTGCTGATGTGAATT+TGG | + | chr4.3:25190555-25190574 | MS.gene47583:CDS | 35.0% | |
| TGCAGTTGAGATTTGTGATT+CGG | + | chr4.3:25190633-25190652 | MS.gene47583:CDS | 35.0% | |
| TGCTAAAGGAAAGGAGAAAT+TGG | + | chr4.3:25191098-25191117 | MS.gene47583:CDS | 35.0% | |
| TTCCAATCGTAGAAAAGAGT+AGG | - | chr4.3:25192564-25192583 | None:intergenic | 35.0% | |
| ! | ATGCATCACTTTGGGTTATT+TGG | + | chr4.3:25192427-25192446 | MS.gene47583:intron | 35.0% |
| ! | CTCTTTTCTACGATTGGAAT+TGG | + | chr4.3:25192565-25192584 | MS.gene47583:intron | 35.0% |
| ! | GAGAATTGTGATGATGCTAA+AGG | + | chr4.3:25191084-25191103 | MS.gene47583:CDS | 35.0% |
| ! | GGTACAATATATTCTGGAGA+GGG | - | chr4.3:25191683-25191702 | None:intergenic | 35.0% |
| ! | TGATGATGAAGATGGAATTG+TGG | + | chr4.3:25190477-25190496 | MS.gene47583:CDS | 35.0% |
| ! | TGTAGTATCGAAGAATGTGA+GGG | + | chr4.3:25190582-25190601 | MS.gene47583:CDS | 35.0% |
| ! | TTGAATGGTGATGATGAAGA+TGG | + | chr4.3:25190469-25190488 | MS.gene47583:CDS | 35.0% |
| ! | TTGTGATGATGCTAAAGGAA+AGG | + | chr4.3:25191089-25191108 | MS.gene47583:CDS | 35.0% |
| !! | AACAGGTTTGGTGTCTAAAA+CGG | - | chr4.3:25190245-25190264 | None:intergenic | 35.0% |
| !! | CTGAGATGAAAAGGAGTATT+CGG | - | chr4.3:25190271-25190290 | None:intergenic | 35.0% |
| !! | CTTTAAAGAACGGATTGTGA+TGG | + | chr4.3:25192076-25192095 | MS.gene47583:CDS | 35.0% |
| !! | TGAATTGAGTGTTGGAGATT+TGG | + | chr4.3:25190867-25190886 | MS.gene47583:CDS | 35.0% |
| !!! | TTCCCTTTTTTACCCTTCAT+AGG | - | chr4.3:25190391-25190410 | None:intergenic | 35.0% |
| !!! | TTTCCGTAGATAGGGTTTTT+TGG | + | chr4.3:25192602-25192621 | MS.gene47583:intron | 35.0% |
| AACTTCACCGATCTTAATGG+TGG | - | chr4.3:25190302-25190321 | None:intergenic | 40.0% | |
| AATCCACCATCAAAATCGGT+CGG | + | chr4.3:25190104-25190123 | MS.gene47583:CDS | 40.0% | |
| AATCTCCTCTGTTGAAACAG+GGG | + | chr4.3:25192232-25192251 | MS.gene47583:CDS | 40.0% | |
| ACCAAACTTGTAACACCACA+AGG | - | chr4.3:25191808-25191827 | None:intergenic | 40.0% | |
| AGGAATTGAAGTGTGAGAGA+TGG | - | chr4.3:25190043-25190062 | None:intergenic | 40.0% | |
| AGGTTTGTGATTCGAGTAAC+GGG | + | chr4.3:25190752-25190771 | MS.gene47583:CDS | 40.0% | |
| CAATCGTAGAAAAGAGTAGG+CGG | - | chr4.3:25192561-25192580 | None:intergenic | 40.0% | |
| CAATCTCCTCTGTTGAAACA+GGG | + | chr4.3:25192231-25192250 | MS.gene47583:CDS | 40.0% | |
| CGGAATTGAAATGGATAGTG+AGG | - | chr4.3:25190183-25190202 | None:intergenic | 40.0% | |
| CTGTTAAAACCACTGCTGTT+TGG | + | chr4.3:25192749-25192768 | MS.gene47583:intron | 40.0% | |
| CTTCTACTATGGTTTCCGTA+GGG | - | chr4.3:25190363-25190382 | None:intergenic | 40.0% | |
| CTTGGTTCCTGATATTATGC+TGG | - | chr4.3:25192400-25192419 | None:intergenic | 40.0% | |
| GAATAAAGGGGTTGTGATTG+AGG | + | chr4.3:25190948-25190967 | MS.gene47583:CDS | 40.0% | |
| GAGAAAAAGAAAACAAGGGG+TGG | + | chr4.3:25191006-25191025 | MS.gene47583:CDS | 40.0% | |
| GAGGTTTGTGATTCGAGTAA+CGG | + | chr4.3:25190751-25190770 | MS.gene47583:CDS | 40.0% | |
| GATACATTATGACGTACTCC+CGG | - | chr4.3:25191524-25191543 | None:intergenic | 40.0% | |
| GATGGTTCCACCATTAAGAT+CGG | + | chr4.3:25190292-25190311 | MS.gene47583:CDS | 40.0% | |
| GATGTAGACATCATAGTTCG+TGG | + | chr4.3:25192179-25192198 | MS.gene47583:CDS | 40.0% | |
| GATTGAGGAAGATTTGAGCT+TGG | + | chr4.3:25190963-25190982 | MS.gene47583:CDS | 40.0% | |
| GCACCAAAAAACCCTATCTA+CGG | - | chr4.3:25192608-25192627 | None:intergenic | 40.0% | |
| GCAGTTGAGATTTGTGATTC+GGG | + | chr4.3:25190634-25190653 | MS.gene47583:CDS | 40.0% | |
| GGAAATACCTGGATCTTTGA+TGG | - | chr4.3:25190152-25190171 | None:intergenic | 40.0% | |
| GGGGATTGATGAAGTTAACA+AGG | - | chr4.3:25190333-25190352 | None:intergenic | 40.0% | |
| GTATTCCTCGTAACCTTCAT+CGG | - | chr4.3:25190514-25190533 | None:intergenic | 40.0% | |
| TAAGGGGAAGAAGAAATTGC+AGG | + | chr4.3:25191032-25191051 | MS.gene47583:CDS | 40.0% | |
| TAGTTCTTGGGAGGAATTAG+TGG | + | chr4.3:25192485-25192504 | MS.gene47583:intron | 40.0% | |
| TATCTACGGAAACACTCTCT+CGG | - | chr4.3:25192594-25192613 | None:intergenic | 40.0% | |
| TCAATCTCCTCTGTTGAAAC+AGG | + | chr4.3:25192230-25192249 | MS.gene47583:CDS | 40.0% | |
| TCTTCTACTATGGTTTCCGT+AGG | - | chr4.3:25190364-25190383 | None:intergenic | 40.0% | |
| TGGATGAGGTTTGAGAAAAC+TGG | + | chr4.3:25191963-25191982 | MS.gene47583:intron | 40.0% | |
| TGTAGACATCATAGTTCGTG+GGG | + | chr4.3:25192181-25192200 | MS.gene47583:CDS | 40.0% | |
| TGTTTCAACAGAGGAGATTG+AGG | - | chr4.3:25192231-25192250 | None:intergenic | 40.0% | |
| ! | AAATTGGAGGAAGAGTGTGT+TGG | + | chr4.3:25191114-25191133 | MS.gene47583:CDS | 40.0% |
| ! | AATTTACCAGAAGAGCGTGT+TGG | + | chr4.3:25191162-25191181 | MS.gene47583:CDS | 40.0% |
| ! | AGGTGAGTGGTTTGATTTCT+TGG | + | chr4.3:25191422-25191441 | MS.gene47583:CDS | 40.0% |
| ! | CAAGAAAAGTGTGTTGGTGA+TGG | + | chr4.3:25191312-25191331 | MS.gene47583:CDS | 40.0% |
| ! | CGGTACAATATATTCTGGAG+AGG | - | chr4.3:25191684-25191703 | None:intergenic | 40.0% |
| ! | CTGTAGTATCGAAGAATGTG+AGG | + | chr4.3:25190581-25190600 | MS.gene47583:CDS | 40.0% |
| ! | GAAATGGATAGTGAGGTGTT+TGG | - | chr4.3:25190176-25190195 | None:intergenic | 40.0% |
| ! | GAAGATTTGAGCTTGGTGAA+TGG | + | chr4.3:25190970-25190989 | MS.gene47583:CDS | 40.0% |
| ! | GAGATTTGTGATTCGGGTAA+TGG | + | chr4.3:25190640-25190659 | MS.gene47583:CDS | 40.0% |
| ! | GGAATTAGTGGATGACATCA+AGG | + | chr4.3:25192497-25192516 | MS.gene47583:intron | 40.0% |
| ! | TGATTCGGGTAATGGTGATT+TGG | + | chr4.3:25190648-25190667 | MS.gene47583:CDS | 40.0% |
| !! | AGAGAGTGTTTCCGTAGATA+GGG | + | chr4.3:25192594-25192613 | MS.gene47583:intron | 40.0% |
| !! | AGATGAAAAGGAGTATTCGG+AGG | - | chr4.3:25190268-25190287 | None:intergenic | 40.0% |
| !! | TCCTTGTGGTGTTACAAGTT+TGG | + | chr4.3:25191804-25191823 | MS.gene47583:intron | 40.0% |
| !! | TTGAGTGTTGGAGATTTGGA+TGG | + | chr4.3:25190871-25190890 | MS.gene47583:CDS | 40.0% |
| !!! | ACCGATTTTGATGGTGGATT+CGG | - | chr4.3:25190104-25190123 | None:intergenic | 40.0% |
| !!! | GTCTGCTGTTTTCTGGTTTT+TGG | + | chr4.3:25192654-25192673 | MS.gene47583:intron | 40.0% |
| AAGTGATGCATGACCTGTCT+TGG | - | chr4.3:25192418-25192437 | None:intergenic | 45.0% | |
| AGAAGAATGTGAGGGTGACA+AGG | + | chr4.3:25190701-25190720 | MS.gene47583:CDS | 45.0% | |
| AGACAGGTCATGCATCACTT+TGG | + | chr4.3:25192418-25192437 | MS.gene47583:intron | 45.0% | |
| AGTATTCGGAGGAACAGGTT+TGG | - | chr4.3:25190257-25190276 | None:intergenic | 45.0% | |
| ATCCACCATCAAAATCGGTC+GGG | + | chr4.3:25190105-25190124 | MS.gene47583:CDS | 45.0% | |
| ATCTACGGAAACACTCTCTC+GGG | - | chr4.3:25192593-25192612 | None:intergenic | 45.0% | |
| CAATCCCCAAAGTAACCCTA+CGG | + | chr4.3:25190345-25190364 | MS.gene47583:CDS | 45.0% | |
| CCCGAATCCACCATCAAAAT+CGG | + | chr4.3:25190100-25190119 | MS.gene47583:CDS | 45.0% | |
| CTGGAAGCCAGCATAATATC+AGG | + | chr4.3:25192390-25192409 | MS.gene47583:intron | 45.0% | |
| GAACCATCGCTGAGATGAAA+AGG | - | chr4.3:25190280-25190299 | None:intergenic | 45.0% | |
| GACAGGTCATGCATCACTTT+GGG | + | chr4.3:25192419-25192438 | MS.gene47583:intron | 45.0% | |
| GAGTGTGAAAGAGAAAGTGG+AGG | + | chr4.3:25190783-25190802 | MS.gene47583:CDS | 45.0% | |
| GATTCACACATGGTGCAGTA+AGG | + | chr4.3:25192259-25192278 | MS.gene47583:intron | 45.0% | |
| GGGGTTTCTGAATTGAGTGT+TGG | + | chr4.3:25190859-25190878 | MS.gene47583:CDS | 45.0% | |
| GGTTTGTGATTCGAGTAACG+GGG | + | chr4.3:25190753-25190772 | MS.gene47583:CDS | 45.0% | |
| TGAAGGTTACGAGGAATACG+CGG | + | chr4.3:25190515-25190534 | MS.gene47583:CDS | 45.0% | |
| TGAGGGTGACAAGGAATTTG+AGG | + | chr4.3:25190824-25190843 | MS.gene47583:CDS | 45.0% | |
| TGGAGATTTGGATGGTGTGA+AGG | + | chr4.3:25190879-25190898 | MS.gene47583:CDS | 45.0% | |
| TGGTTTCCGTAGGGTTACTT+TGG | - | chr4.3:25190354-25190373 | None:intergenic | 45.0% | |
| TTAACAGCACAAACAGCAGC+AGG | - | chr4.3:25192736-25192755 | None:intergenic | 45.0% | |
| TTTGGATGATGTGCAGGAGA+AGG | + | chr4.3:25190666-25190685 | MS.gene47583:CDS | 45.0% | |
| TTTGGATGGTGTGAAGGAGA+AGG | + | chr4.3:25190885-25190904 | MS.gene47583:CDS | 45.0% | |
| ! | AAAACAAGGGGTGGTGCTAA+GGG | + | chr4.3:25191015-25191034 | MS.gene47583:CDS | 45.0% |
| ! | AAATTACCGGAAGAGTGCGT+TGG | + | chr4.3:25191210-25191229 | MS.gene47583:CDS | 45.0% |
| ! | ACTCCTTTTCATCTCAGCGA+TGG | + | chr4.3:25190274-25190293 | MS.gene47583:CDS | 45.0% |
| ! | AGGTGTTTGGTGGAAATACC+TGG | - | chr4.3:25190163-25190182 | None:intergenic | 45.0% |
| ! | ATGACATCAAGGTGCTATCG+TGG | + | chr4.3:25192508-25192527 | MS.gene47583:intron | 45.0% |
| ! | ATGGATAGTGAGGTGTTTGG+TGG | - | chr4.3:25190173-25190192 | None:intergenic | 45.0% |
| ! | CAGGAAGAGATTGTTGGTGA+TGG | + | chr4.3:25191051-25191070 | MS.gene47583:CDS | 45.0% |
| ! | CGCCTACTCTTTTCTACGAT+TGG | + | chr4.3:25192559-25192578 | MS.gene47583:intron | 45.0% |
| ! | GGAGAGTGTGAAAGAGAAAG+TGG | + | chr4.3:25190780-25190799 | MS.gene47583:CDS | 45.0% |
| ! | GGATGAGAATTGGCCTGATT+TGG | + | chr4.3:25191386-25191405 | MS.gene47583:CDS | 45.0% |
| ! | GGATTCGGGTTTGAATAGGT+GGG | - | chr4.3:25190089-25190108 | None:intergenic | 45.0% |
| ! | GGTTTCCGTAGGGTTACTTT+GGG | - | chr4.3:25190353-25190372 | None:intergenic | 45.0% |
| ! | GTTTCCGTAGGGTTACTTTG+GGG | - | chr4.3:25190352-25190371 | None:intergenic | 45.0% |
| ! | TCTCTCGGCTTTTTGTCTCA+TGG | - | chr4.3:25191499-25191518 | None:intergenic | 45.0% |
| ! | TGATTCGAGTAACGGGGATT+TGG | + | chr4.3:25190759-25190778 | MS.gene47583:CDS | 45.0% |
| ! | TGGATTCGGGTTTGAATAGG+TGG | - | chr4.3:25190090-25190109 | None:intergenic | 45.0% |
| ! | TGGTGATTTGGATGATGTGC+AGG | + | chr4.3:25190660-25190679 | MS.gene47583:CDS | 45.0% |
| ! | TTTGAGCTTGGTGAATGGAG+TGG | + | chr4.3:25190975-25190994 | MS.gene47583:CDS | 45.0% |
| !! | AAAGGAGTATTCGGAGGAAC+AGG | - | chr4.3:25190262-25190281 | None:intergenic | 45.0% |
| !! | CTGATATTATGCTGGCTTCC+AGG | - | chr4.3:25192392-25192411 | None:intergenic | 45.0% |
| !! | GAGAGAGTGTTTCCGTAGAT+AGG | + | chr4.3:25192593-25192612 | MS.gene47583:intron | 45.0% |
| !! | GAGATTGTTGGTGATGGAGA+TGG | + | chr4.3:25191057-25191076 | MS.gene47583:CDS | 45.0% |
| !! | TGGTGGATTCGGGTTTGAAT+AGG | - | chr4.3:25190093-25190112 | None:intergenic | 45.0% |
| !! | TGTGTTGGTGATGGAGATGA+TGG | + | chr4.3:25191129-25191148 | MS.gene47583:CDS | 45.0% |
| !!! | CCGATTTTGATGGTGGATTC+GGG | - | chr4.3:25190103-25190122 | None:intergenic | 45.0% |
| AACCTCCCCATCAAAGATCC+AGG | + | chr4.3:25190142-25190161 | MS.gene47583:CDS | 50.0% | |
| ACAAAAAGCCGAGAGACTCC+GGG | + | chr4.3:25191503-25191522 | MS.gene47583:CDS | 50.0% | |
| AGCAGCAACAGCAGTAACAG+CGG | - | chr4.3:25192634-25192653 | None:intergenic | 50.0% | |
| ATCATAGTTCGTGGGGTGAC+CGG | + | chr4.3:25192188-25192207 | MS.gene47583:CDS | 50.0% | |
| CTCACACTTCAATTCCTCGC+CGG | + | chr4.3:25190046-25190065 | MS.gene47583:CDS | 50.0% | |
| CTGAACCGATGAAGGTTACG+AGG | + | chr4.3:25190506-25190525 | MS.gene47583:CDS | 50.0% | |
| CTTGTCATCCTCACACTCCT+CGG | - | chr4.3:25190919-25190938 | None:intergenic | 50.0% | |
| GACAAAAAGCCGAGAGACTC+CGG | + | chr4.3:25191502-25191521 | MS.gene47583:CDS | 50.0% | |
| GGAGCTGATCTGAGAAGTTC+CGG | - | chr4.3:25192210-25192229 | None:intergenic | 50.0% | |
| TACCTGGATCTTTGATGGGG+AGG | - | chr4.3:25190147-25190166 | None:intergenic | 50.0% | |
| TGAGTGACTGCTAGTGCATC+AGG | + | chr4.3:25191990-25192009 | MS.gene47583:intron | 50.0% | |
| TGCTAGTGCATCAGGTGATC+AGG | + | chr4.3:25191998-25192017 | MS.gene47583:intron | 50.0% | |
| ! | AAACAAGGGGTGGTGCTAAG+GGG | + | chr4.3:25191016-25191035 | MS.gene47583:CDS | 50.0% |
| ! | ACATCAAGGTGCTATCGTGG+AGG | + | chr4.3:25192511-25192530 | MS.gene47583:intron | 50.0% |
| ! | GAAAACAAGGGGTGGTGCTA+AGG | + | chr4.3:25191014-25191033 | MS.gene47583:CDS | 50.0% |
| ! | GAGGAAGAGTGTGTTGGTGA+TGG | + | chr4.3:25191120-25191139 | MS.gene47583:CDS | 50.0% |
| !! | CTCGTAACCTTCATCGGTTC+AGG | - | chr4.3:25190508-25190527 | None:intergenic | 50.0% |
| !! | GATGACCCGACCGATTTTGA+TGG | - | chr4.3:25190113-25190132 | None:intergenic | 50.0% |
| !!! | TGCTGCTGTCTGCTGTTTTC+TGG | + | chr4.3:25192647-25192666 | MS.gene47583:intron | 50.0% |
| !!! | TTTTGGTGCTGTCTCTGTGC+AGG | + | chr4.3:25192671-25192690 | MS.gene47583:intron | 50.0% |
| AAAATCGGTCGGGTCATCCG+CGG | + | chr4.3:25190115-25190134 | MS.gene47583:CDS | 55.0% | |
| CACTGCCCCTGTTTCAACAG+AGG | - | chr4.3:25192240-25192259 | None:intergenic | 55.0% | |
| CAGGGGCAGTGATTCACACA+TGG | + | chr4.3:25192249-25192268 | MS.gene47583:CDS | 55.0% | |
| CCATCACCAACACGCTCTTC+TGG | - | chr4.3:25191171-25191190 | None:intergenic | 55.0% | |
| CGAAGAATGTGAGGGTGACG+AGG | + | chr4.3:25190590-25190609 | MS.gene47583:CDS | 55.0% | |
| CGTGGAGGTGGAGTTTAACG+CGG | + | chr4.3:25192526-25192545 | MS.gene47583:intron | 55.0% | |
| GGATCGACCTGAACCGATGA+AGG | + | chr4.3:25190498-25190517 | MS.gene47583:CDS | 55.0% | |
| GGATGATGTGCAGGAGAAGG+TGG | + | chr4.3:25190669-25190688 | MS.gene47583:CDS | 55.0% | |
| GGATGGTGTGAAGGAGAAGG+TGG | + | chr4.3:25190888-25190907 | MS.gene47583:CDS | 55.0% | |
| GGTTTCTCCCTTACGTGGAC+CGG | - | chr4.3:25190068-25190087 | None:intergenic | 55.0% | |
| TCGTCACCAACGCACTCTTC+CGG | - | chr4.3:25191219-25191238 | None:intergenic | 55.0% | |
| TGCAAACGGCCAAACAGCAG+TGG | - | chr4.3:25192761-25192780 | None:intergenic | 55.0% | |
| TGGTGTGAAGGAGAAGGTGG+AGG | + | chr4.3:25190891-25190910 | MS.gene47583:CDS | 55.0% | |
| TTACGAGGAATACGCGGAGC+AGG | + | chr4.3:25190521-25190540 | MS.gene47583:CDS | 55.0% | |
| ! | ACTGCTGTTTGGCCGTTTGC+AGG | + | chr4.3:25192760-25192779 | MS.gene47583:intron | 55.0% |
| ! | AGGTGGGTTTCTCCCTTACG+TGG | - | chr4.3:25190073-25190092 | None:intergenic | 55.0% |
| ! | CCAGAAGAGCGTGTTGGTGA+TGG | + | chr4.3:25191168-25191187 | MS.gene47583:CDS | 55.0% |
| ! | CGAGGAGTGTGAGGATGACA+AGG | + | chr4.3:25190917-25190936 | MS.gene47583:CDS | 55.0% |
| ! | CTGCTGTTTGGCCGTTTGCA+GGG | + | chr4.3:25192761-25192780 | MS.gene47583:intron | 55.0% |
| ! | TCAAGGTGCTATCGTGGAGG+TGG | + | chr4.3:25192514-25192533 | MS.gene47583:intron | 55.0% |
| ! | TGCTGTTTGGCCGTTTGCAG+GGG | + | chr4.3:25192762-25192781 | MS.gene47583:intron | 55.0% |
| !! | GACCCGACCGATTTTGATGG+TGG | - | chr4.3:25190110-25190129 | None:intergenic | 55.0% |
| !! | GGCTGGTAGCGTTTTTGCTG+GGG | + | chr4.3:25192783-25192802 | MS.gene47583:CDS | 55.0% |
| !! | GGGCTGGTAGCGTTTTTGCT+GGG | + | chr4.3:25192782-25192801 | MS.gene47583:CDS | 55.0% |
| ACGCTACCAGCCCCTGCAAA+CGG | - | chr4.3:25192775-25192794 | None:intergenic | 60.0% | |
| ATTCCTCGCCGGTCCACGTA+AGG | + | chr4.3:25190057-25190076 | MS.gene47583:CDS | 60.0% | |
| GACGTACTCCCGGAGTCTCT+CGG | - | chr4.3:25191514-25191533 | None:intergenic | 60.0% | |
| TGATGGGGAGGTTGTTGCCG+CGG | - | chr4.3:25190135-25190154 | None:intergenic | 60.0% | |
| TTCCTCGCCGGTCCACGTAA+GGG | + | chr4.3:25190058-25190077 | MS.gene47583:CDS | 60.0% | |
| ! | GTTTTTGCTGGGGCTGCCTG+CGG | + | chr4.3:25192793-25192812 | MS.gene47583:CDS | 60.0% |
| ! | TTTTTGCTGGGGCTGCCTGC+GGG | + | chr4.3:25192794-25192813 | MS.gene47583:CDS | 60.0% |
| !! | GGGGCTGGTAGCGTTTTTGC+TGG | + | chr4.3:25192781-25192800 | MS.gene47583:intron | 60.0% |
| AGGAGAAGGTGGAGGAGCCG+AGG | + | chr4.3:25190899-25190918 | MS.gene47583:CDS | 65.0% | |
| GTTTGGCCGTTTGCAGGGGC+TGG | + | chr4.3:25192766-25192785 | MS.gene47583:intron | 65.0% | |
| ! | TGGAGGAGCCGAGGAGTGTG+AGG | + | chr4.3:25190908-25190927 | MS.gene47583:CDS | 65.0% |
| CTCCCTTACGTGGACCGGCG+AGG | - | chr4.3:25190063-25190082 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 25190019 | 25192822 | 25190019 | ID=MS.gene47583 |
| chr4.3 | mRNA | 25190019 | 25192822 | 25190019 | ID=MS.gene47583.t1;Parent=MS.gene47583 |
| chr4.3 | exon | 25190019 | 25191577 | 25190019 | ID=MS.gene47583.t1.exon1;Parent=MS.gene47583.t1 |
| chr4.3 | CDS | 25190019 | 25191577 | 25190019 | ID=cds.MS.gene47583.t1;Parent=MS.gene47583.t1 |
| chr4.3 | exon | 25192004 | 25192275 | 25192004 | ID=MS.gene47583.t1.exon2;Parent=MS.gene47583.t1 |
| chr4.3 | CDS | 25192004 | 25192275 | 25192004 | ID=cds.MS.gene47583.t1;Parent=MS.gene47583.t1 |
| chr4.3 | exon | 25192782 | 25192822 | 25192782 | ID=MS.gene47583.t1.exon3;Parent=MS.gene47583.t1 |
| chr4.3 | CDS | 25192782 | 25192822 | 25192782 | ID=cds.MS.gene47583.t1;Parent=MS.gene47583.t1 |
| Gene Sequence |
| Protein sequence |
