Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47956.t1 | XP_013446711.1 | 97 | 439 | 11 | 2 | 1 | 437 | 1 | 439 | 1.30E-176 | 629.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47956.t1 | O48716 | 32.0 | 334 | 209 | 8 | 99 | 427 | 99 | 419 | 2.0e-29 | 131.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47956.t1 | A0A072TV41 | 97.0 | 439 | 11 | 2 | 1 | 437 | 1 | 439 | 9.1e-177 | 629.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058907 | MS.gene47956 | 0.965661 | 6.79E-125 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene47956 | MS.gene064484 | PPI |
| MS.gene47956 | MS.gene020660 | PPI |
| MS.gene47956 | MS.gene04775 | PPI |
| MS.gene47956 | MS.gene060919 | PPI |
| MS.gene010581 | MS.gene47956 | PPI |
| MS.gene47956 | MS.gene016020 | PPI |
| MS.gene47956 | MS.gene64726 | PPI |
| MS.gene47956 | MS.gene007411 | PPI |
| MS.gene47956 | MS.gene59431 | PPI |
| MS.gene05932 | MS.gene47956 | PPI |
| MS.gene47956 | MS.gene049135 | PPI |
| MS.gene47956 | MS.gene22414 | PPI |
| MS.gene47956 | MS.gene055900 | PPI |
| MS.gene47956 | MS.gene029810 | PPI |
| MS.gene33168 | MS.gene47956 | PPI |
| MS.gene007535 | MS.gene47956 | PPI |
| MS.gene47956 | MS.gene015737 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47956.t1 | MTR_8g089650 | 98.178 | 439 | 6 | 2 | 1 | 437 | 1 | 439 | 0.0 | 877 |
| MS.gene47956.t1 | MTR_4g104410 | 54.335 | 346 | 136 | 10 | 88 | 426 | 33 | 363 | 7.22e-115 | 341 |
| MS.gene47956.t1 | MTR_5g035980 | 46.959 | 411 | 156 | 14 | 67 | 428 | 48 | 445 | 1.35e-106 | 323 |
| MS.gene47956.t1 | MTR_4g106480 | 45.455 | 396 | 181 | 12 | 51 | 428 | 20 | 398 | 7.85e-103 | 312 |
| MS.gene47956.t1 | MTR_3g078380 | 46.173 | 392 | 178 | 13 | 60 | 428 | 30 | 411 | 2.13e-101 | 308 |
| MS.gene47956.t1 | MTR_1g021590 | 42.687 | 335 | 172 | 9 | 99 | 427 | 112 | 432 | 4.34e-80 | 255 |
| MS.gene47956.t1 | MTR_2g060070 | 39.710 | 345 | 190 | 8 | 82 | 424 | 51 | 379 | 1.55e-76 | 244 |
| MS.gene47956.t1 | MTR_5g018520 | 40.541 | 333 | 180 | 7 | 99 | 426 | 100 | 419 | 3.69e-76 | 245 |
| MS.gene47956.t1 | MTR_4g068457 | 37.883 | 359 | 204 | 7 | 79 | 427 | 108 | 457 | 9.35e-74 | 240 |
| MS.gene47956.t1 | MTR_2g101410 | 33.062 | 369 | 205 | 11 | 77 | 428 | 66 | 409 | 1.20e-58 | 198 |
| MS.gene47956.t1 | MTR_3g110185 | 36.441 | 354 | 195 | 12 | 85 | 428 | 78 | 411 | 4.66e-54 | 193 |
| MS.gene47956.t1 | MTR_3g110185 | 26.275 | 255 | 149 | 8 | 209 | 439 | 87 | 326 | 7.65e-12 | 67.8 |
| MS.gene47956.t1 | MTR_4g071130 | 24.290 | 317 | 169 | 11 | 78 | 366 | 2 | 275 | 2.58e-13 | 72.8 |
| MS.gene47956.t1 | MTR_6g465150 | 26.316 | 228 | 117 | 6 | 230 | 424 | 129 | 338 | 6.86e-13 | 70.5 |
| MS.gene47956.t1 | MTR_1g090827 | 24.606 | 317 | 168 | 11 | 78 | 366 | 2 | 275 | 7.83e-13 | 71.2 |
| MS.gene47956.t1 | MTR_3g088545 | 23.618 | 199 | 97 | 3 | 218 | 367 | 95 | 287 | 1.16e-12 | 69.3 |
| MS.gene47956.t1 | MTR_8g028700 | 27.354 | 223 | 126 | 9 | 209 | 424 | 230 | 423 | 1.34e-12 | 70.1 |
| MS.gene47956.t1 | MTR_2g102267 | 25.260 | 289 | 163 | 11 | 160 | 431 | 41 | 293 | 2.42e-12 | 68.2 |
| MS.gene47956.t1 | MTR_4g105700 | 27.074 | 229 | 134 | 10 | 222 | 429 | 419 | 635 | 1.21e-11 | 67.4 |
| MS.gene47956.t1 | MTR_1g072140 | 27.660 | 235 | 141 | 9 | 200 | 429 | 18 | 228 | 1.88e-11 | 65.5 |
| MS.gene47956.t1 | MTR_4g123597 | 25.857 | 321 | 186 | 12 | 73 | 374 | 414 | 701 | 2.35e-11 | 66.6 |
| MS.gene47956.t1 | MTR_4g069090 | 31.250 | 160 | 95 | 5 | 209 | 367 | 109 | 254 | 7.54e-11 | 64.7 |
| MS.gene47956.t1 | MTR_8g104010 | 27.523 | 218 | 132 | 7 | 209 | 425 | 912 | 1104 | 9.62e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47956.t1 | AT1G24530 | 64.130 | 368 | 118 | 4 | 62 | 428 | 51 | 405 | 5.50e-168 | 478 |
| MS.gene47956.t1 | AT1G24130 | 46.053 | 380 | 175 | 12 | 67 | 428 | 45 | 412 | 2.28e-100 | 306 |
| MS.gene47956.t1 | AT5G50120 | 42.391 | 368 | 180 | 11 | 85 | 428 | 27 | 386 | 7.21e-91 | 281 |
| MS.gene47956.t1 | AT2G26490 | 41.493 | 335 | 176 | 9 | 99 | 427 | 99 | 419 | 1.00e-78 | 252 |
| MS.gene47956.t1 | AT1G49450 | 40.708 | 339 | 183 | 7 | 99 | 427 | 137 | 467 | 8.56e-76 | 244 |
| MS.gene47956.t1 | AT3G51930 | 38.292 | 363 | 182 | 11 | 84 | 424 | 50 | 392 | 2.53e-74 | 239 |
| MS.gene47956.t1 | AT3G50390 | 39.645 | 338 | 182 | 8 | 99 | 427 | 101 | 425 | 5.75e-74 | 239 |
| MS.gene47956.t1 | AT3G18950 | 38.393 | 336 | 189 | 8 | 99 | 427 | 141 | 465 | 8.14e-71 | 231 |
| MS.gene47956.t1 | AT4G34380 | 37.389 | 337 | 196 | 7 | 99 | 427 | 128 | 457 | 1.34e-65 | 218 |
| MS.gene47956.t1 | AT1G47610 | 39.763 | 337 | 179 | 12 | 99 | 426 | 27 | 348 | 1.52e-65 | 214 |
| MS.gene47956.t1 | AT1G21651 | 31.707 | 164 | 100 | 5 | 209 | 366 | 523 | 680 | 1.95e-14 | 76.3 |
| MS.gene47956.t1 | AT1G21650 | 31.707 | 164 | 100 | 5 | 209 | 366 | 523 | 680 | 2.80e-14 | 75.9 |
| MS.gene47956.t1 | AT1G49040 | 28.899 | 218 | 129 | 7 | 209 | 425 | 898 | 1090 | 1.35e-13 | 73.6 |
| MS.gene47956.t1 | AT4G02730 | 29.534 | 193 | 108 | 9 | 241 | 429 | 34 | 202 | 1.21e-12 | 69.3 |
| MS.gene47956.t1 | AT3G49660 | 26.316 | 209 | 125 | 7 | 222 | 424 | 127 | 312 | 2.85e-12 | 67.8 |
| MS.gene47956.t1 | AT1G62020 | 23.975 | 317 | 170 | 10 | 78 | 366 | 2 | 275 | 5.45e-12 | 68.6 |
| MS.gene47956.t1 | AT5G25150 | 33.103 | 145 | 86 | 5 | 225 | 366 | 477 | 613 | 1.19e-11 | 67.4 |
| MS.gene47956.t1 | AT5G25150 | 33.103 | 145 | 86 | 5 | 225 | 366 | 477 | 613 | 1.41e-11 | 67.0 |
| MS.gene47956.t1 | AT3G21540 | 30.872 | 149 | 92 | 5 | 229 | 374 | 561 | 701 | 2.43e-11 | 66.6 |
| MS.gene47956.t1 | AT3G05090 | 29.412 | 204 | 94 | 9 | 209 | 366 | 83 | 282 | 3.39e-11 | 65.9 |
| MS.gene47956.t1 | AT3G05090 | 29.412 | 204 | 94 | 9 | 209 | 366 | 83 | 282 | 3.39e-11 | 65.9 |
| MS.gene47956.t1 | AT3G05090 | 29.412 | 204 | 94 | 9 | 209 | 366 | 83 | 282 | 3.39e-11 | 65.9 |
| MS.gene47956.t1 | AT5G16750 | 25.751 | 233 | 137 | 10 | 219 | 438 | 415 | 624 | 4.31e-11 | 65.9 |
| MS.gene47956.t1 | AT5G16750 | 23.293 | 249 | 149 | 6 | 85 | 326 | 10 | 223 | 5.80e-11 | 65.1 |
| MS.gene47956.t1 | AT2G21390 | 23.028 | 317 | 173 | 11 | 78 | 366 | 2 | 275 | 4.52e-11 | 65.9 |
| MS.gene47956.t1 | AT2G43770 | 32.164 | 171 | 83 | 8 | 288 | 429 | 46 | 212 | 7.11e-11 | 63.9 |
Find 0 sgRNAs with CRISPR-Local
Find 146 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TTCTTTAGATGGTGAAATAA+AGG | + | 57394:17993-18012 | MS.gene47956:CDS | 25.0% |
| !! | AATTCAAGAGTATAATGATG+AGG | + | 57394:17924-17943 | MS.gene47956:CDS | 25.0% |
| TAGATGGTGAAATAAAGGTT+TGG | + | 57394:17998-18017 | MS.gene47956:CDS | 30.0% | |
| AAGGTTTGGCAACTTTCTAT+TGG | + | 57394:18012-18031 | MS.gene47956:CDS | 35.0% | |
| AGGTTTGGCAACTTTCTATT+GGG | + | 57394:18013-18032 | MS.gene47956:CDS | 35.0% | |
| CGATCGTTCGATATTAGTAT+GGG | + | 57394:17693-17712 | MS.gene47956:CDS | 35.0% | |
| GAAAGTCAAAGTTCTCCAAA+CGG | + | 57394:17949-17968 | MS.gene47956:CDS | 35.0% | |
| GGGACAAAACACTCAAAATA+TGG | + | 57394:17431-17450 | MS.gene47956:CDS | 35.0% | |
| GTGTTTAGTGGTTCTTTAGA+TGG | + | 57394:17982-18001 | MS.gene47956:CDS | 35.0% | |
| ! | TTTGGAGAAGCATAAATCAG+CGG | + | 57394:17618-17637 | MS.gene47956:CDS | 35.0% |
| !! | GCATGTTGTTGTTTCTTAGA+TGG | - | 57394:16833-16852 | None:intergenic | 35.0% |
| !! | GTTGTTGTTTCTTAGATGGA+TGG | - | 57394:16829-16848 | None:intergenic | 35.0% |
| !!! | GGATGGTTATGTAGTTTTGT+GGG | - | 57394:17324-17343 | None:intergenic | 35.0% |
| !!! | GGTTTTGAGAAGAGAGTTTT+TGG | - | 57394:16961-16980 | None:intergenic | 35.0% |
| !!! | GTTGATTTGGTTTTCAGTTG+CGG | - | 57394:17083-17102 | None:intergenic | 35.0% |
| AACACCAAATCCATTTCCTC+CGG | + | 57394:17142-17161 | MS.gene47956:CDS | 40.0% | |
| ACTTTCTATTGGGTGTGATC+TGG | + | 57394:18023-18042 | MS.gene47956:CDS | 40.0% | |
| AGAGGATAGTGCGAATCATA+TGG | + | 57394:17720-17739 | MS.gene47956:CDS | 40.0% | |
| CAGAAAATATTGACCCTGAG+AGG | - | 57394:18049-18068 | None:intergenic | 40.0% | |
| CGAATCATATGGTTGTGAGT+GGG | + | 57394:17731-17750 | MS.gene47956:CDS | 40.0% | |
| CGTTATCTACTCCGTTTCAT+GGG | + | 57394:17411-17430 | MS.gene47956:CDS | 40.0% | |
| GAATCATATGGTTGTGAGTG+GGG | + | 57394:17732-17751 | MS.gene47956:CDS | 40.0% | |
| GATATTAGTATGGGAACGAG+AGG | + | 57394:17702-17721 | MS.gene47956:CDS | 40.0% | |
| GCGATCGTTCGATATTAGTA+TGG | + | 57394:17692-17711 | MS.gene47956:CDS | 40.0% | |
| GGAGATATGTACACGTTTGA+CGG | - | 57394:17114-17133 | None:intergenic | 40.0% | |
| GGATAAACGAATACGCGTTT+GGG | + | 57394:17555-17574 | MS.gene47956:CDS | 40.0% | |
| GTAAAGGAGGTTGTTATGGA+GGG | - | 57394:17059-17078 | None:intergenic | 40.0% | |
| GTAGTTGCTATAGAGAGTTG+AGG | - | 57394:16906-16925 | None:intergenic | 40.0% | |
| TTTAGTTGAACCGGAGGAAA+TGG | - | 57394:17155-17174 | None:intergenic | 40.0% | |
| TTTGGAGAGATGGAACTGAT+GGG | - | 57394:16943-16962 | None:intergenic | 40.0% | |
| ! | ATTTGGAAGCGGGTTTATGA+TGG | + | 57394:17841-17860 | MS.gene47956:CDS | 40.0% |
| ! | GAAGACCATGTCTTTAGAGA+AGG | - | 57394:17185-17204 | None:intergenic | 40.0% |
| ! | GAGTGTTTTGTCCCATGAAA+CGG | - | 57394:17425-17444 | None:intergenic | 40.0% |
| ! | TTTGGAAGCGGGTTTATGAT+GGG | + | 57394:17842-17861 | MS.gene47956:CDS | 40.0% |
| !! | CGGATGGTTATGTAGTTTTG+TGG | - | 57394:17325-17344 | None:intergenic | 40.0% |
| !! | GAAGAGAGTTTTTGGAGAGA+TGG | - | 57394:16953-16972 | None:intergenic | 40.0% |
| !! | GGAAATGGATTTGGTGTTGA+AGG | - | 57394:17140-17159 | None:intergenic | 40.0% |
| !! | TTTTGGAGAGATGGAACTGA+TGG | - | 57394:16944-16963 | None:intergenic | 40.0% |
| !!! | AACGTGCTTTTTTTCTCCGA+CGG | - | 57394:17587-17606 | None:intergenic | 40.0% |
| !!! | GACGGTTCAGTGTTATTTTC+AGG | + | 57394:17664-17683 | MS.gene47956:CDS | 40.0% |
| !!! | GGTGGTTGTTGTTGTTTTTG+TGG | - | 57394:17249-17268 | None:intergenic | 40.0% |
| !!! | GGTTGTTGTTGTTTTTGTGG+TGG | - | 57394:17246-17265 | None:intergenic | 40.0% |
| !!! | TGGTTATGTAGTTTTGTGGG+AGG | - | 57394:17321-17340 | None:intergenic | 40.0% |
| !!! | TGTTGTTGTTTTTGTGGTGG+TGG | - | 57394:17243-17262 | None:intergenic | 40.0% |
| !!! | TTATGTAGTTTTGTGGGAGG+AGG | - | 57394:17318-17337 | None:intergenic | 40.0% |
| AACCGTCTACACAGGATCAT+CGG | + | 57394:17534-17553 | MS.gene47956:CDS | 45.0% | |
| AAGACTGCAAAATCCGTGTC+TGG | + | 57394:17215-17234 | MS.gene47956:CDS | 45.0% | |
| ATCCGATGATCCTGTGTAGA+CGG | - | 57394:17539-17558 | None:intergenic | 45.0% | |
| ATTGCCGCTAACGACTTAAC+CGG | - | 57394:17907-17926 | None:intergenic | 45.0% | |
| CGGATAAACGAATACGCGTT+TGG | + | 57394:17554-17573 | MS.gene47956:CDS | 45.0% | |
| CGTAAAGGAGGTTGTTATGG+AGG | - | 57394:17060-17079 | None:intergenic | 45.0% | |
| CTTAGATGGATGGAGTGAGA+TGG | - | 57394:16819-16838 | None:intergenic | 45.0% | |
| GAAACCGGTTAAGTCGTTAG+CGG | + | 57394:17900-17919 | MS.gene47956:CDS | 45.0% | |
| GCGAATCATATGGTTGTGAG+TGG | + | 57394:17730-17749 | MS.gene47956:CDS | 45.0% | |
| GCGTTATCTACTCCGTTTCA+TGG | + | 57394:17410-17429 | MS.gene47956:CDS | 45.0% | |
| TCGTTGCTTAGAATCCCTCA+AGG | + | 57394:17468-17487 | MS.gene47956:CDS | 45.0% | |
| ! | AGACACGGATTTTGCAGTCT+TGG | - | 57394:17216-17235 | None:intergenic | 45.0% |
| ! | CAATCCAGAGACGTTTTACG+TGG | - | 57394:17351-17370 | None:intergenic | 45.0% |
| ! | CATCGCCTTCTCTAAAGACA+TGG | + | 57394:17177-17196 | MS.gene47956:CDS | 45.0% |
| ! | CATGTCTTTAGAGAAGGCGA+TGG | - | 57394:17179-17198 | None:intergenic | 45.0% |
| ! | CTAACGACTTAACCGGTTTC+CGG | - | 57394:17900-17919 | None:intergenic | 45.0% |
| ! | GAGTGAGATGGTTGAGTTGT+GGG | - | 57394:16807-16826 | None:intergenic | 45.0% |
| ! | GATTTTGCAGTCTTGGTGAG+TGG | - | 57394:17209-17228 | None:intergenic | 45.0% |
| ! | TGAACCGGAGGAAATGGATT+TGG | - | 57394:17149-17168 | None:intergenic | 45.0% |
| ! | TGGGAAGAGTGGTTAACTTG+CGG | - | 57394:17270-17289 | None:intergenic | 45.0% |
| ! | TGTTGTGTTGGTGTTCTCGA+TGG | + | 57394:17871-17890 | MS.gene47956:CDS | 45.0% |
| !! | AGTTTTGTGGGAGGAGGAAA+CGG | - | 57394:17312-17331 | None:intergenic | 45.0% |
| !! | GATGGGTCGTTTTGTTGTGT+TGG | + | 57394:17859-17878 | MS.gene47956:CDS | 45.0% |
| !! | GTCTCTGATTTGTTGCTGAG+TGG | + | 57394:17796-17815 | MS.gene47956:CDS | 45.0% |
| !! | TGGATTTGGTGTTGAAGGTG+TGG | - | 57394:17135-17154 | None:intergenic | 45.0% |
| !!! | ACGTGCTTTTTTTCTCCGAC+GGG | - | 57394:17586-17605 | None:intergenic | 45.0% |
| !!! | GATGGTTTTAGTTGAACCGG+AGG | - | 57394:17161-17180 | None:intergenic | 45.0% |
| !!! | GGCGATGGTTTTAGTTGAAC+CGG | - | 57394:17164-17183 | None:intergenic | 45.0% |
| AACACAGAAACGACGCCGTT+TGG | - | 57394:17967-17986 | None:intergenic | 50.0% | |
| AACGATGGAACCGTCTACAC+AGG | + | 57394:17526-17545 | MS.gene47956:CDS | 50.0% | |
| AACGGAGTAGATAACGCCGT+TGG | - | 57394:17407-17426 | None:intergenic | 50.0% | |
| ACACTGAACCGTCGTCGTTT+AGG | - | 57394:17657-17676 | None:intergenic | 50.0% | |
| AGGAGACGGAGAAGTTGTTG+AGG | - | 57394:16982-17001 | None:intergenic | 50.0% | |
| CACTGAACCGTCGTCGTTTA+GGG | - | 57394:17656-17675 | None:intergenic | 50.0% | |
| CGGCGTAAAGGAGGTTGTTA+TGG | - | 57394:17063-17082 | None:intergenic | 50.0% | |
| CTGATCGGACGGTTAGGATT+TGG | + | 57394:17824-17843 | MS.gene47956:CDS | 50.0% | |
| GACGGTTAGGATTTGGAAGC+GGG | + | 57394:17831-17850 | MS.gene47956:CDS | 50.0% | |
| GAGGTTGTTATGGAGGGCAA+GGG | - | 57394:17053-17072 | None:intergenic | 50.0% | |
| GCGGTTGCAGTTTCTAACGA+TGG | + | 57394:17511-17530 | MS.gene47956:CDS | 50.0% | |
| GCTTTAGCCCTAAACGACGA+CGG | + | 57394:17646-17665 | MS.gene47956:CDS | 50.0% | |
| GGACGGTTAGGATTTGGAAG+CGG | + | 57394:17830-17849 | MS.gene47956:CDS | 50.0% | |
| GGCGTCGTTTCTGTGTTTAG+TGG | + | 57394:17970-17989 | MS.gene47956:CDS | 50.0% | |
| GTAGATAACGCCGTTGGAGA+CGG | - | 57394:17401-17420 | None:intergenic | 50.0% | |
| TTTCAGTTGCGGCGTAAAGG+AGG | - | 57394:17072-17091 | None:intergenic | 50.0% | |
| ! | AGAGACGTTTTACGTGGCGA+CGG | - | 57394:17345-17364 | None:intergenic | 50.0% |
| ! | AGGTGCTGTCGTCAGAGTTT+AGG | - | 57394:16886-16905 | None:intergenic | 50.0% |
| ! | GACGGTCGTAGACGTTGATT+TGG | - | 57394:17096-17115 | None:intergenic | 50.0% |
| ! | GCACGTTCTAGTTGCGACTT+TGG | + | 57394:17600-17619 | MS.gene47956:CDS | 50.0% |
| ! | GGAGTGAGATGGTTGAGTTG+TGG | - | 57394:16808-16827 | None:intergenic | 50.0% |
| ! | GGTGCTGTCGTCAGAGTTTA+GGG | - | 57394:16885-16904 | None:intergenic | 50.0% |
| ! | GGTTTTCAGTTGCGGCGTAA+AGG | - | 57394:17075-17094 | None:intergenic | 50.0% |
| ! | TGAGATGGTTGAGTTGTGGG+TGG | - | 57394:16804-16823 | None:intergenic | 50.0% |
| ! | TGCTGAGTGGTTCTGCTGAT+CGG | + | 57394:17809-17828 | MS.gene47956:CDS | 50.0% |
| ! | TTGGTGTTCTCGATGGTCAC+CGG | + | 57394:17878-17897 | MS.gene47956:CDS | 50.0% |
| !! | GAAGAGTGGTTAACTTGCGG+TGG | - | 57394:17267-17286 | None:intergenic | 50.0% |
| ACACGAAGACGCAGTCAACG+CGG | + | 57394:17492-17511 | MS.gene47956:CDS | 55.0% | |
| GGAGGTTGTTATGGAGGGCA+AGG | - | 57394:17054-17073 | None:intergenic | 55.0% | |
| GGTGATGCAGTGGTAGGAGA+CGG | - | 57394:16996-17015 | None:intergenic | 55.0% | |
| GTCGCCACGTAAAACGTCTC+TGG | + | 57394:17344-17363 | MS.gene47956:CDS | 55.0% | |
| GTTCTGCTGATCGGACGGTT+AGG | + | 57394:17818-17837 | MS.gene47956:CDS | 55.0% | |
| GTTGTTATGGAGGGCAAGGG+AGG | - | 57394:17050-17069 | None:intergenic | 55.0% | |
| TCTCGATGGTCACCGGAAAC+CGG | + | 57394:17885-17904 | MS.gene47956:CDS | 55.0% | |
| TGAACATGCCGACGCTGTCA+CGG | + | 57394:17369-17388 | MS.gene47956:CDS | 55.0% | |
| TGCGTCTTCGTGTGCCTTGA+GGG | - | 57394:17485-17504 | None:intergenic | 55.0% | |
| TTTGTGGGAGGAGGAAACGG+CGG | - | 57394:17309-17328 | None:intergenic | 55.0% | |
| ! | ACGTTTTACGTGGCGACGGA+TGG | - | 57394:17341-17360 | None:intergenic | 55.0% |
| ! | GAGTGGTTCTGCTGATCGGA+CGG | + | 57394:17813-17832 | MS.gene47956:CDS | 55.0% |
| ! | GATGGTTGAGTTGTGGGTGG+TGG | - | 57394:16801-16820 | None:intergenic | 55.0% |
| !! | GGTTGTGAGTGGGGCATTGA+GGG | + | 57394:17741-17760 | MS.gene47956:CDS | 55.0% |
| !! | GTTGTGAGTGGGGCATTGAG+GGG | + | 57394:17742-17761 | MS.gene47956:CDS | 55.0% |
| !! | TGGTTGTGAGTGGGGCATTG+AGG | + | 57394:17740-17759 | MS.gene47956:CDS | 55.0% |
| !! | TGTGGTGGTGGTTCCAGACA+CGG | - | 57394:17231-17250 | None:intergenic | 55.0% |
| !! | TTGTGAGTGGGGCATTGAGG+GGG | + | 57394:17743-17762 | MS.gene47956:CDS | 55.0% |
| ACGGACCTTGCCGTCTCCAA+CGG | + | 57394:17388-17407 | MS.gene47956:CDS | 60.0% | |
| AGGTGATAGGGCGGGAAGAG+TGG | - | 57394:17030-17049 | None:intergenic | 60.0% | |
| CTGCGTCTTCGTGTGCCTTG+AGG | - | 57394:17486-17505 | None:intergenic | 60.0% | |
| GAGGGAGGTGATGCAGTGGT+AGG | - | 57394:17002-17021 | None:intergenic | 60.0% | |
| GGAGGGCAAGGGAGGTGATA+GGG | - | 57394:17042-17061 | None:intergenic | 60.0% | |
| GGGTGTGATCTGGCCTCTCA+GGG | + | 57394:18033-18052 | MS.gene47956:CDS | 60.0% | |
| GGTGATAGGGCGGGAAGAGT+GGG | - | 57394:17029-17048 | None:intergenic | 60.0% | |
| GTCGTTGACGGTGGGAAGAG+TGG | - | 57394:17281-17300 | None:intergenic | 60.0% | |
| GTGATAGGGCGGGAAGAGTG+GGG | - | 57394:17028-17047 | None:intergenic | 60.0% | |
| GTGTGAGGGAGGTGATGCAG+TGG | - | 57394:17006-17025 | None:intergenic | 60.0% | |
| TAACGCCGTTGGAGACGGCA+AGG | - | 57394:17396-17415 | None:intergenic | 60.0% | |
| TGGAGGGCAAGGGAGGTGAT+AGG | - | 57394:17043-17062 | None:intergenic | 60.0% | |
| TGGGTGTGATCTGGCCTCTC+AGG | + | 57394:18032-18051 | MS.gene47956:CDS | 60.0% | |
| ! | GGTTGAGTTGTGGGTGGTGG+TGG | - | 57394:16798-16817 | None:intergenic | 60.0% |
| ACGGCGGAGACGGTCGTTGA+CGG | - | 57394:17293-17312 | None:intergenic | 65.0% | |
| CGCGTTTGGGCGAAACCCGT+CGG | + | 57394:17568-17587 | MS.gene47956:CDS | 65.0% | |
| CGGAGACGGTCGTTGACGGT+GGG | - | 57394:17289-17308 | None:intergenic | 65.0% | |
| GCGGGAAGAGTGGGGTGTGA+GGG | - | 57394:17020-17039 | None:intergenic | 65.0% | |
| GGAAGAGTGGGGTGTGAGGG+AGG | - | 57394:17017-17036 | None:intergenic | 65.0% | |
| GGAGGAGGAAACGGCGGAGA+CGG | - | 57394:17303-17322 | None:intergenic | 65.0% | |
| GGCAAGGGAGGTGATAGGGC+GGG | - | 57394:17038-17057 | None:intergenic | 65.0% | |
| GGCAAGGTCCGTGACAGCGT+CGG | - | 57394:17380-17399 | None:intergenic | 65.0% | |
| GGGCAAGGGAGGTGATAGGG+CGG | - | 57394:17039-17058 | None:intergenic | 65.0% | |
| GCGGAGACGGTCGTTGACGG+TGG | - | 57394:17290-17309 | None:intergenic | 70.0% | |
| GGCGGGAAGAGTGGGGTGTG+AGG | - | 57394:17021-17040 | None:intergenic | 70.0% | |
| !! | GGTGGTGGTGGCGCAGTTGG+CGG | - | 57394:16786-16805 | None:intergenic | 70.0% |
| !! | GTGGGTGGTGGTGGCGCAGT+TGG | - | 57394:16789-16808 | None:intergenic | 70.0% |
| ! | GGTGGTGGCGCAGTTGGCGG+AGG | - | 57394:16783-16802 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 57394 | gene | 16749 | 18077 | 16749 | ID=MS.gene47956 |
| 57394 | mRNA | 16749 | 18077 | 16749 | ID=MS.gene47956.t1;Parent=MS.gene47956 |
| 57394 | exon | 16749 | 18077 | 16749 | ID=MS.gene47956.t1.exon1;Parent=MS.gene47956.t1 |
| 57394 | CDS | 16749 | 18077 | 16749 | ID=cds.MS.gene47956.t1;Parent=MS.gene47956.t1 |
| Gene Sequence |
| Protein sequence |
