Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015737.t1 | XP_003630825.2 | 96.7 | 419 | 9 | 3 | 1 | 415 | 1 | 418 | 7.80E-221 | 776.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015737.t1 | Q9T0K7 | 73.3 | 386 | 99 | 1 | 34 | 415 | 36 | 421 | 9.2e-162 | 571.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015737.t1 | I3S5F5 | 96.7 | 419 | 9 | 3 | 1 | 415 | 1 | 418 | 5.6e-221 | 776.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene015737 | MS.gene058907 | PPI |
| MS.gene000261 | MS.gene015737 | PPI |
| MS.gene022768 | MS.gene015737 | PPI |
| MS.gene015737 | MS.gene022542 | PPI |
| MS.gene015737 | MS.gene030881 | PPI |
| MS.gene39279 | MS.gene015737 | PPI |
| MS.gene015737 | MS.gene62781 | PPI |
| MS.gene69510 | MS.gene015737 | PPI |
| MS.gene016092 | MS.gene015737 | PPI |
| MS.gene015737 | MS.gene049135 | PPI |
| MS.gene61573 | MS.gene015737 | PPI |
| MS.gene022542 | MS.gene015737 | PPI |
| MS.gene020199 | MS.gene015737 | PPI |
| MS.gene33113 | MS.gene015737 | PPI |
| MS.gene59431 | MS.gene015737 | PPI |
| MS.gene019194 | MS.gene015737 | PPI |
| MS.gene04775 | MS.gene015737 | PPI |
| MS.gene010581 | MS.gene015737 | PPI |
| MS.gene058482 | MS.gene015737 | PPI |
| MS.gene015737 | MS.gene04775 | PPI |
| MS.gene051489 | MS.gene015737 | PPI |
| MS.gene27992 | MS.gene015737 | PPI |
| MS.gene05932 | MS.gene015737 | PPI |
| MS.gene47956 | MS.gene015737 | PPI |
| MS.gene64726 | MS.gene015737 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015737.t1 | MTR_8g103840 | 98.143 | 377 | 7 | 0 | 39 | 415 | 1 | 377 | 0.0 | 761 |
| MS.gene015737.t1 | MTR_8g103840 | 92.124 | 419 | 24 | 5 | 1 | 415 | 1 | 414 | 0.0 | 750 |
| MS.gene015737.t1 | MTR_8g103840 | 98.403 | 313 | 5 | 0 | 103 | 415 | 4 | 316 | 0.0 | 631 |
| MS.gene015737.t1 | MTR_8g103840 | 97.611 | 293 | 7 | 0 | 123 | 415 | 8 | 300 | 0.0 | 587 |
| MS.gene015737.t1 | MTR_8g103840 | 98.134 | 268 | 5 | 0 | 148 | 415 | 1 | 268 | 0.0 | 540 |
| MS.gene015737.t1 | MTR_8g010580 | 36.034 | 358 | 207 | 10 | 55 | 409 | 22 | 360 | 1.64e-53 | 182 |
| MS.gene015737.t1 | MTR_3g046330 | 30.769 | 364 | 226 | 11 | 51 | 410 | 19 | 360 | 9.82e-49 | 170 |
| MS.gene015737.t1 | MTR_8g005990 | 33.151 | 365 | 217 | 12 | 48 | 406 | 40 | 383 | 4.67e-48 | 169 |
| MS.gene015737.t1 | MTR_8g010580 | 34.821 | 336 | 197 | 10 | 55 | 387 | 22 | 338 | 2.55e-45 | 160 |
| MS.gene015737.t1 | MTR_1g014040 | 31.356 | 354 | 215 | 12 | 58 | 405 | 58 | 389 | 3.93e-45 | 161 |
| MS.gene015737.t1 | MTR_8g005990 | 32.055 | 365 | 198 | 12 | 48 | 406 | 40 | 360 | 7.70e-41 | 149 |
| MS.gene015737.t1 | MTR_8g010580 | 35.424 | 271 | 165 | 7 | 55 | 325 | 22 | 282 | 2.01e-37 | 139 |
| MS.gene015737.t1 | MTR_4g100350 | 25.103 | 243 | 161 | 7 | 36 | 271 | 34 | 262 | 6.97e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015737.t1 | AT4G13360 | 73.316 | 386 | 99 | 1 | 34 | 415 | 36 | 421 | 0.0 | 592 |
| MS.gene015737.t1 | AT3G24360 | 67.980 | 406 | 122 | 1 | 18 | 415 | 13 | 418 | 0.0 | 577 |
| MS.gene015737.t1 | AT3G24360 | 64.532 | 406 | 132 | 3 | 18 | 415 | 13 | 414 | 0.0 | 544 |
| MS.gene015737.t1 | AT3G24360 | 70.288 | 313 | 93 | 0 | 103 | 415 | 4 | 316 | 3.22e-166 | 469 |
| MS.gene015737.t1 | AT3G24360 | 69.153 | 295 | 90 | 1 | 121 | 415 | 21 | 314 | 2.30e-153 | 436 |
| MS.gene015737.t1 | AT3G24360 | 69.072 | 291 | 90 | 0 | 125 | 415 | 3 | 293 | 8.76e-153 | 434 |
| MS.gene015737.t1 | AT3G24360 | 67.905 | 296 | 87 | 1 | 18 | 305 | 13 | 308 | 4.01e-147 | 422 |
| MS.gene015737.t1 | AT5G65940 | 36.944 | 360 | 205 | 9 | 53 | 409 | 19 | 359 | 2.13e-65 | 214 |
| MS.gene015737.t1 | AT5G65940 | 36.944 | 360 | 205 | 9 | 53 | 409 | 19 | 359 | 2.13e-65 | 214 |
| MS.gene015737.t1 | AT2G30660 | 35.112 | 356 | 209 | 9 | 51 | 403 | 13 | 349 | 1.44e-61 | 204 |
| MS.gene015737.t1 | AT5G65940 | 36.607 | 336 | 191 | 9 | 53 | 385 | 19 | 335 | 3.66e-58 | 194 |
| MS.gene015737.t1 | AT2G30650 | 34.890 | 364 | 211 | 9 | 53 | 411 | 15 | 357 | 3.67e-58 | 195 |
| MS.gene015737.t1 | AT2G30660 | 35.077 | 325 | 189 | 9 | 82 | 403 | 12 | 317 | 7.86e-55 | 185 |
| MS.gene015737.t1 | AT1G06550 | 32.958 | 355 | 214 | 11 | 53 | 404 | 21 | 354 | 3.21e-50 | 174 |
| MS.gene015737.t1 | AT5G65940 | 34.663 | 326 | 191 | 9 | 53 | 375 | 19 | 325 | 3.45e-49 | 170 |
| MS.gene015737.t1 | AT4G31810 | 33.144 | 353 | 210 | 11 | 58 | 405 | 56 | 387 | 1.65e-48 | 170 |
| MS.gene015737.t1 | AT2G30650 | 32.317 | 328 | 196 | 9 | 53 | 375 | 15 | 321 | 1.99e-41 | 149 |
| MS.gene015737.t1 | AT3G60510 | 32.295 | 353 | 215 | 10 | 58 | 406 | 52 | 384 | 2.54e-41 | 151 |
| MS.gene015737.t1 | AT3G60510 | 30.933 | 375 | 216 | 11 | 58 | 406 | 52 | 409 | 1.99e-38 | 144 |
| MS.gene015737.t1 | AT3G60510 | 32.342 | 269 | 170 | 8 | 58 | 325 | 52 | 309 | 8.43e-29 | 115 |
Find 118 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGAAGAAAGGTTTGATTT+TGG | 0.204953 | 4.3:+1991965 | None:intergenic |
| ACCTTGATGGTTTCCACTTT+GGG | 0.233100 | 4.3:+1987729 | None:intergenic |
| TTCATGGCGTTGAGAGCTTT+GGG | 0.269255 | 4.3:+1991858 | None:intergenic |
| TTCATTCAAGGAGGCCCTTT+TGG | 0.286601 | 4.3:-1989574 | MS.gene015737:CDS |
| GTTCTTGCAATGCCAGAAAA+TGG | 0.288824 | 4.3:-1990054 | MS.gene015737:CDS |
| CCTGAGATAATTTCTTCATT+TGG | 0.297730 | 4.3:-1989118 | MS.gene015737:CDS |
| CCATCCATGAAACTTATATA+TGG | 0.298685 | 4.3:+1990255 | None:intergenic |
| GTTCATGGCGTTGAGAGCTT+TGG | 0.301149 | 4.3:+1991857 | None:intergenic |
| TTCTTCAGCCATTGAAGAAA+TGG | 0.307356 | 4.3:+1991935 | None:intergenic |
| ACCAGAACACATTTGACATT+TGG | 0.311682 | 4.3:+1991480 | None:intergenic |
| GATGGAATAACAATGGGTTT+TGG | 0.315013 | 4.3:-1990237 | MS.gene015737:CDS |
| CTGACTGCAGGTGCTTATCT+TGG | 0.324350 | 4.3:-1989681 | MS.gene015737:intron |
| AATGCAGGTATGGATATTAA+AGG | 0.328338 | 4.3:-1991252 | MS.gene015737:intron |
| CTGCGACATGATTTCGTAGA+AGG | 0.333713 | 4.3:-1988607 | MS.gene015737:CDS |
| AACCTTGATGGTTTCCACTT+TGG | 0.340812 | 4.3:+1987728 | None:intergenic |
| CCAGAACACATTTGACATTT+GGG | 0.350947 | 4.3:+1991481 | None:intergenic |
| CTCGCCCACCTCTGCTCCTA+AGG | 0.358294 | 4.3:+1987664 | None:intergenic |
| TTTCCGACCCATTTCTTCAA+TGG | 0.359939 | 4.3:-1991943 | MS.gene015737:CDS |
| TCAACTTCCTCCAACCTTGA+TGG | 0.368546 | 4.3:+1987716 | None:intergenic |
| AGTACTTGTTTGTCAAGAAA+AGG | 0.372402 | 4.3:+1988829 | None:intergenic |
| TTTAACTGTGCCTCACTGTC+CGG | 0.378341 | 4.3:+1989151 | None:intergenic |
| ATATGAGCAAATCCTACATC+TGG | 0.391243 | 4.3:+1990018 | None:intergenic |
| CTATTGGTTATTTAGTTCTC+AGG | 0.393990 | 4.3:-1989221 | MS.gene015737:intron |
| GAAACCATATATAAGTTTCA+TGG | 0.401334 | 4.3:-1990259 | MS.gene015737:CDS |
| TATGTGCCATCGGGAAAGTT+AGG | 0.405875 | 4.3:-1989597 | MS.gene015737:CDS |
| ATGCAGGTATGGATATTAAA+GGG | 0.406021 | 4.3:-1991251 | MS.gene015737:intron |
| GCAATGCCAGAAAATGGAAT+TGG | 0.413015 | 4.3:-1990048 | MS.gene015737:CDS |
| CATACAAGTTTGTTGCCAAA+AGG | 0.414169 | 4.3:+1989559 | None:intergenic |
| TAAAAGTTATCTTGATGAAT+GGG | 0.417765 | 4.3:-1991511 | MS.gene015737:CDS |
| GGCAACACCGTTAGAATTAA+CGG | 0.431120 | 4.3:+1991899 | None:intergenic |
| CCCAAATGTCAAATGTGTTC+TGG | 0.432136 | 4.3:-1991481 | MS.gene015737:CDS |
| GAGATAATTTCTTCATTTGG+AGG | 0.438462 | 4.3:-1989115 | MS.gene015737:CDS |
| ATAAAAGTTATCTTGATGAA+TGG | 0.449490 | 4.3:-1991512 | MS.gene015737:CDS |
| AAATAAGAAACCTAGGTTCA+TGG | 0.454268 | 4.3:+1991842 | None:intergenic |
| AGTATTAGTGGATAAAGATC+AGG | 0.459616 | 4.3:-1988575 | MS.gene015737:intron |
| CAGTCGAGCACTGACTCTAA+TGG | 0.460203 | 4.3:-1989049 | MS.gene015737:intron |
| CCAACATATATTGCATCTGC+TGG | 0.461407 | 4.3:+1989633 | None:intergenic |
| TTCATGGATGGAATAACAAT+GGG | 0.461776 | 4.3:-1990243 | MS.gene015737:CDS |
| GTACTTGTTTGTCAAGAAAA+GGG | 0.464988 | 4.3:+1988830 | None:intergenic |
| AAGCACACCTTTAGTGCAAA+AGG | 0.469186 | 4.3:-1991202 | MS.gene015737:intron |
| GGAATTGGCTTATCTGGTCA+TGG | 0.469307 | 4.3:-1990216 | MS.gene015737:CDS |
| GGTGCTTATCTTGGATTGAC+TGG | 0.469940 | 4.3:-1989672 | MS.gene015737:CDS |
| TCTATTTCTAGTTGCTGAGT+GGG | 0.476079 | 4.3:-1988895 | MS.gene015737:intron |
| GATGCAATATATGTTGGCTT+AGG | 0.477695 | 4.3:-1989627 | MS.gene015737:CDS |
| TAGTTCTCAGGATCCCCATC+AGG | 0.480036 | 4.3:-1989209 | MS.gene015737:CDS |
| TCTTCAGCCATTGAAGAAAT+GGG | 0.483584 | 4.3:+1991936 | None:intergenic |
| AAGACGGCTTCAACCTCACT+TGG | 0.485673 | 4.3:+1987692 | None:intergenic |
| TTACCAACAGCTCCTTCTCC+TGG | 0.486422 | 4.3:+1989982 | None:intergenic |
| GCTCTCCAAGGCCTTGCAAA+AGG | 0.490434 | 4.3:-1988864 | MS.gene015737:CDS |
| TTAACTGTGCCTCACTGTCC+GGG | 0.494046 | 4.3:+1989152 | None:intergenic |
| CCAAATGAAGAAATTATCTC+AGG | 0.496539 | 4.3:+1989118 | None:intergenic |
| ATACAAGTTTGTTGCCAAAA+GGG | 0.500776 | 4.3:+1989560 | None:intergenic |
| TGGGGCGATCGAGGGTGAGA+AGG | 0.503187 | 4.3:+1991877 | None:intergenic |
| ATCATACATACCGGCACAAA+AGG | 0.503920 | 4.3:+1991437 | None:intergenic |
| CATATAGCGGCTCAAAGTCC+AGG | 0.508132 | 4.3:-1990000 | MS.gene015737:CDS |
| TCTTGGATTGACTGGAAAGA+GGG | 0.508317 | 4.3:-1989664 | MS.gene015737:CDS |
| GGGAAAGTTAGGTTCATTCA+AGG | 0.518997 | 4.3:-1989586 | MS.gene015737:CDS |
| AAAGTACTTTGATGTCCTGA+TGG | 0.520744 | 4.3:+1989194 | None:intergenic |
| TCTGCCGTTGCCTCTGCACT+AGG | 0.522855 | 4.3:-1988804 | MS.gene015737:CDS |
| ATTGGCTTGTTCCCAGATGT+AGG | 0.524294 | 4.3:-1990030 | MS.gene015737:CDS |
| AGGTGTCCGAGCAGTATTAG+TGG | 0.524429 | 4.3:-1988587 | MS.gene015737:CDS |
| CATTAGAGTCAGTGCTCGAC+TGG | 0.527781 | 4.3:+1989050 | None:intergenic |
| TTTCATGGATGGAATAACAA+TGG | 0.527960 | 4.3:-1990244 | MS.gene015737:CDS |
| ATCTTGGATTGACTGGAAAG+AGG | 0.530642 | 4.3:-1989665 | MS.gene015737:CDS |
| TTCTATTTCTAGTTGCTGAG+TGG | 0.533730 | 4.3:-1988896 | MS.gene015737:intron |
| TGAGAGCTTTGGGGCGATCG+AGG | 0.541267 | 4.3:+1991868 | None:intergenic |
| AAGTACTTTGATGTCCTGAT+GGG | 0.541762 | 4.3:+1989195 | None:intergenic |
| ATGGGTCGGAAAGAGAAGAA+AGG | 0.541911 | 4.3:+1991954 | None:intergenic |
| CCAGCAGATGCAATATATGT+TGG | 0.544693 | 4.3:-1989633 | MS.gene015737:CDS |
| GTGGAAACCATCAAGGTTGG+AGG | 0.546371 | 4.3:-1987723 | MS.gene015737:CDS |
| GGGGCGATCGAGGGTGAGAA+GGG | 0.549823 | 4.3:+1991878 | None:intergenic |
| AAAGTGGAAACCATCAAGGT+TGG | 0.553124 | 4.3:-1987726 | MS.gene015737:CDS |
| GAAGCCGTCTTTAAACCCTT+AGG | 0.555410 | 4.3:-1987680 | MS.gene015737:CDS |
| GAGAGCTTTGGGGCGATCGA+GGG | 0.558416 | 4.3:+1991869 | None:intergenic |
| CCTTTCCATCGAAAATTACA+CGG | 0.558704 | 4.3:+1987637 | None:intergenic |
| GGAACACACTATGTGCCATC+GGG | 0.563387 | 4.3:-1989606 | MS.gene015737:CDS |
| ACCCAAAGTGGAAACCATCA+AGG | 0.563693 | 4.3:-1987730 | MS.gene015737:CDS |
| GTTTGTCAAGAAAAGGGAGA+AGG | 0.565056 | 4.3:+1988836 | None:intergenic |
| CCATATATAAGTTTCATGGA+TGG | 0.569201 | 4.3:-1990255 | MS.gene015737:CDS |
| TGCTCCTAAGGGTTTAAAGA+CGG | 0.569607 | 4.3:+1987676 | None:intergenic |
| TTTGCCTAGTGCAGAGGCAA+CGG | 0.570032 | 4.3:+1988800 | None:intergenic |
| TAAACCCTTAGGAGCAGAGG+TGG | 0.570655 | 4.3:-1987669 | MS.gene015737:CDS |
| GCTCTCAACGCCATGAACCT+AGG | 0.579390 | 4.3:-1991852 | MS.gene015737:intron |
| TTTGCATATCAAAGAATACT+CGG | 0.580158 | 4.3:+1990296 | None:intergenic |
| AGGAACACACTATGTGCCAT+CGG | 0.580813 | 4.3:-1989607 | MS.gene015737:CDS |
| CTTTATCCACTAATACTGCT+CGG | 0.582905 | 4.3:+1988581 | None:intergenic |
| TCGCCCACCTCTGCTCCTAA+GGG | 0.584657 | 4.3:+1987665 | None:intergenic |
| TCATGGCGTTGAGAGCTTTG+GGG | 0.585204 | 4.3:+1991859 | None:intergenic |
| AGTCCAGGAGAAGGAGCTGT+TGG | 0.585383 | 4.3:-1989985 | MS.gene015737:intron |
| ATGTCGCAGCGAAGACCTCA+AGG | 0.588206 | 4.3:+1988621 | None:intergenic |
| ATTCACTGCAGAACCCAAAG+TGG | 0.590706 | 4.3:-1987742 | MS.gene015737:intron |
| GCGGCTCAAAGTCCAGGAGA+AGG | 0.592993 | 4.3:-1989994 | MS.gene015737:CDS |
| TATGAGCAAATCCTACATCT+GGG | 0.594751 | 4.3:+1990019 | None:intergenic |
| TTTGTCAAGAAAAGGGAGAA+GGG | 0.596278 | 4.3:+1988837 | None:intergenic |
| CTGAGTATCGCATTGCCTTG+AGG | 0.604394 | 4.3:-1988636 | MS.gene015737:CDS |
| ACCGGCACAAAAGGCACGAG+GGG | 0.606107 | 4.3:+1991446 | None:intergenic |
| CTTTAAACCCTTAGGAGCAG+AGG | 0.606217 | 4.3:-1987672 | MS.gene015737:CDS |
| AATGAACCTAACTTTCCCGA+TGG | 0.624467 | 4.3:+1989591 | None:intergenic |
| CAGCCATTGAAGAAATGGGT+CGG | 0.624981 | 4.3:+1991940 | None:intergenic |
| ATGGCTGAAGAATTCGTCAA+AGG | 0.630406 | 4.3:-1991924 | MS.gene015737:CDS |
| TGGGCTGATGAAGCTCTCCA+AGG | 0.631128 | 4.3:-1988876 | MS.gene015737:CDS |
| AGCAAGATATGAGTCAAACC+CGG | 0.631831 | 4.3:-1989170 | MS.gene015737:CDS |
| AAAGGCACCGTTAATTCTAA+CGG | 0.635338 | 4.3:-1991906 | MS.gene015737:CDS |
| TGCAGGTATGGATATTAAAG+GGG | 0.636890 | 4.3:-1991250 | MS.gene015737:intron |
| GGTTGTTGCTGAAATACAGA+AGG | 0.644020 | 4.3:-1991229 | MS.gene015737:CDS |
| CTTTCCATCGAAAATTACAC+GGG | 0.647825 | 4.3:+1987638 | None:intergenic |
| AAACGACTGTGAATTATCCA+CGG | 0.650353 | 4.3:-1988778 | MS.gene015737:intron |
| GGAGGAAGTTGATCCAAGTG+AGG | 0.659499 | 4.3:-1987705 | MS.gene015737:CDS |
| TGTAGGATTTGCTCATATAG+CGG | 0.671989 | 4.3:-1990013 | MS.gene015737:CDS |
| AAACCCTTAGGAGCAGAGGT+GGG | 0.675531 | 4.3:-1987668 | MS.gene015737:CDS |
| TACCGGCACAAAAGGCACGA+GGG | 0.677239 | 4.3:+1991445 | None:intergenic |
| AGTACTTTGATGTCCTGATG+GGG | 0.677245 | 4.3:+1989196 | None:intergenic |
| AAAGTTAGGTTCATTCAAGG+AGG | 0.694937 | 4.3:-1989583 | MS.gene015737:CDS |
| CCGCTATCGTATCATAACAG+AGG | 0.696061 | 4.3:-1990193 | MS.gene015737:intron |
| TGAGTCAAACCCGGACAGTG+AGG | 0.708212 | 4.3:-1989161 | MS.gene015737:CDS |
| ATACCGGCACAAAAGGCACG+AGG | 0.714810 | 4.3:+1991444 | None:intergenic |
| ATCTGTTATTGAAATCATCG+AGG | 0.717212 | 4.3:-1989086 | MS.gene015737:CDS |
| CCTCTGTTATGATACGATAG+CGG | 0.726952 | 4.3:+1990193 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTACAAATGTAATCTAAT+AGG | + | chr4.3:1989199-1989218 | None:intergenic | 15.0% |
| !! | ATTAGATTACATTTGTAATT+TGG | - | chr4.3:1989199-1989218 | MS.gene015737:CDS | 15.0% |
| !! | TTGTTTGAACTTATTTATAT+TGG | - | chr4.3:1991461-1991480 | MS.gene015737:CDS | 15.0% |
| !!! | ATTGATAAATTTTACTTTTG+CGG | - | chr4.3:1991263-1991282 | MS.gene015737:intron | 15.0% |
| !!! | CTTCAATGTTTTAAAATAAT+TGG | - | chr4.3:1988935-1988954 | MS.gene015737:intron | 15.0% |
| !!! | GAATTTTTAGTTAATTATGT+AGG | - | chr4.3:1988101-1988120 | MS.gene015737:intron | 15.0% |
| !!! | TTGATTCATATTTTAATGAA+AGG | - | chr4.3:1988004-1988023 | MS.gene015737:intron | 15.0% |
| !! | AATCTATCAACAACAAAAAA+AGG | + | chr4.3:1991781-1991800 | None:intergenic | 20.0% |
| !! | ACAAAAAAGATGTAACTAAA+GGG | + | chr4.3:1989133-1989152 | None:intergenic | 20.0% |
| !! | ATAAAAGTTATCTTGATGAA+TGG | - | chr4.3:1988178-1988197 | MS.gene015737:intron | 20.0% |
| !! | CTTAACTTAAGAAGTTTAAA+GGG | + | chr4.3:1990206-1990225 | None:intergenic | 20.0% |
| !! | GTTTATTCGATGATTTAATA+AGG | - | chr4.3:1989777-1989796 | MS.gene015737:intron | 20.0% |
| !! | TAAAAGTTATCTTGATGAAT+GGG | - | chr4.3:1988179-1988198 | MS.gene015737:intron | 20.0% |
| !! | TAAAATATTCAAACCGAATT+CGG | + | chr4.3:1989989-1990008 | None:intergenic | 20.0% |
| !! | TCTTAACTTAAGAAGTTTAA+AGG | + | chr4.3:1990207-1990226 | None:intergenic | 20.0% |
| !! | TTCTTAAGTTAAGATTGAAT+TGG | - | chr4.3:1990213-1990232 | MS.gene015737:CDS | 20.0% |
| !!! | AAAAATATGGTGATAATGAT+AGG | + | chr4.3:1990671-1990690 | None:intergenic | 20.0% |
| !!! | AAAAGGTATTCATTTTGAAT+TGG | + | chr4.3:1988846-1988865 | None:intergenic | 20.0% |
| !!! | CTTTTTTTTTTTTGAGCAAA+AGG | + | chr4.3:1991845-1991864 | None:intergenic | 20.0% |
| !!! | GATTCAAAACAATTGATTTT+TGG | - | chr4.3:1988123-1988142 | MS.gene015737:intron | 20.0% |
| !!! | GTTATGTTTTGTTCAATATT+TGG | - | chr4.3:1991892-1991911 | MS.gene015737:CDS | 20.0% |
| !!! | TATGAGTATAAAAGCATAAA+CGG | + | chr4.3:1991338-1991357 | None:intergenic | 20.0% |
| !!! | TATTTCTGATTATTGTCATA+AGG | - | chr4.3:1987946-1987965 | MS.gene015737:intron | 20.0% |
| !!! | TTGGTAATAAACAGTTATTA+AGG | - | chr4.3:1988954-1988973 | MS.gene015737:intron | 20.0% |
| ! | AAAAAAAACCATGACACATA+TGG | + | chr4.3:1990319-1990338 | None:intergenic | 25.0% |
| ! | AACACTCATTAAATTCATGT+TGG | + | chr4.3:1990991-1991010 | None:intergenic | 25.0% |
| ! | ACTATTAAAACATCTAGATG+TGG | - | chr4.3:1989885-1989904 | MS.gene015737:intron | 25.0% |
| ! | ATCACCAAAAAAAAAGGAAA+AGG | + | chr4.3:1990948-1990967 | None:intergenic | 25.0% |
| ! | ATGAAAGGTTAAGAATTTGA+TGG | + | chr4.3:1988809-1988828 | None:intergenic | 25.0% |
| ! | ATTAAGCAACTATACTATAG+CGG | + | chr4.3:1989528-1989547 | None:intergenic | 25.0% |
| ! | ATTGAACAAAACATAACTGT+GGG | + | chr4.3:1991889-1991908 | None:intergenic | 25.0% |
| ! | CAAAAAAAGGATTTGTACAA+AGG | + | chr4.3:1991768-1991787 | None:intergenic | 25.0% |
| ! | GAAACCATATATAAGTTTCA+TGG | - | chr4.3:1989431-1989450 | MS.gene015737:intron | 25.0% |
| ! | GACAAAAAAGATGTAACTAA+AGG | + | chr4.3:1989134-1989153 | None:intergenic | 25.0% |
| ! | GCTAATAATATCTACACAAA+AGG | + | chr4.3:1988863-1988882 | None:intergenic | 25.0% |
| ! | TAAATTCATGTTGGAAAACA+TGG | + | chr4.3:1990982-1991001 | None:intergenic | 25.0% |
| ! | TATGAAAATAGTGCACAAAA+AGG | + | chr4.3:1989839-1989858 | None:intergenic | 25.0% |
| ! | TATTGAACAAAACATAACTG+TGG | + | chr4.3:1991890-1991909 | None:intergenic | 25.0% |
| ! | TGAATGAAAATAAGAAACCT+AGG | + | chr4.3:1987858-1987877 | None:intergenic | 25.0% |
| ! | TTCAGTGTAAGCAAAAAATA+TGG | + | chr4.3:1990684-1990703 | None:intergenic | 25.0% |
| ! | TTTGCATATCAAAGAATACT+CGG | + | chr4.3:1989397-1989416 | None:intergenic | 25.0% |
| !! | ATGAGTATAAAAGCATAAAC+GGG | + | chr4.3:1991337-1991356 | None:intergenic | 25.0% |
| !! | GCATGGTTTTTATAAATGAA+AGG | + | chr4.3:1988824-1988843 | None:intergenic | 25.0% |
| !! | TTTTATTAACACATTTCCAG+AGG | - | chr4.3:1989610-1989629 | MS.gene015737:CDS | 25.0% |
| !!! | AACAGCTTATTAGTTTTCAT+AGG | - | chr4.3:1989923-1989942 | MS.gene015737:intron | 25.0% |
| !!! | TTGATTTTTGGAAATCTTTG+TGG | - | chr4.3:1988135-1988154 | MS.gene015737:intron | 25.0% |
| !!! | TTTTCATAGGTTTTGTTGAA+AGG | - | chr4.3:1989936-1989955 | MS.gene015737:intron | 25.0% |
| !!! | TTTTCCTTTTTTTTTGGTGA+TGG | - | chr4.3:1990947-1990966 | MS.gene015737:intron | 25.0% |
| AAATAAGAAACCTAGGTTCA+TGG | + | chr4.3:1987851-1987870 | None:intergenic | 30.0% | |
| AACTTAAGAAGTTTAAAGGG+TGG | + | chr4.3:1990203-1990222 | None:intergenic | 30.0% | |
| AAGACTCAAGAGCAATTTAA+AGG | + | chr4.3:1990167-1990186 | None:intergenic | 30.0% | |
| AAGCATGTAAAAAATGCAAC+TGG | + | chr4.3:1988548-1988567 | None:intergenic | 30.0% | |
| AAGTTATCCTCAAAAGCTTA+TGG | + | chr4.3:1991552-1991571 | None:intergenic | 30.0% | |
| AATCTATCTGCATATATTGG+GGG | - | chr4.3:1991718-1991737 | MS.gene015737:intron | 30.0% | |
| AATGAGTGTTCTATCTGTAT+TGG | - | chr4.3:1991001-1991020 | MS.gene015737:intron | 30.0% | |
| AATGCAGGTATGGATATTAA+AGG | - | chr4.3:1988438-1988457 | MS.gene015737:intron | 30.0% | |
| ACATGCATGCAGAAAATTAT+TGG | - | chr4.3:1991223-1991242 | MS.gene015737:CDS | 30.0% | |
| ACCAATCTATCTGCATATAT+TGG | - | chr4.3:1991715-1991734 | MS.gene015737:intron | 30.0% | |
| ACGATCTTACACAAAACTAT+TGG | - | chr4.3:1990453-1990472 | MS.gene015737:intron | 30.0% | |
| AGTACTTGTTTGTCAAGAAA+AGG | + | chr4.3:1990864-1990883 | None:intergenic | 30.0% | |
| ATCACCATCACCAAAAAAAA+AGG | + | chr4.3:1990954-1990973 | None:intergenic | 30.0% | |
| ATCTGTTATTGAAATCATCG+AGG | - | chr4.3:1990604-1990623 | MS.gene015737:intron | 30.0% | |
| ATGCAGGTATGGATATTAAA+GGG | - | chr4.3:1988439-1988458 | MS.gene015737:intron | 30.0% | |
| CAATCTATCTGCATATATTG+GGG | - | chr4.3:1991717-1991736 | MS.gene015737:intron | 30.0% | |
| CCAAATGAAGAAATTATCTC+AGG | + | chr4.3:1990575-1990594 | None:intergenic | 30.0% | |
| CCAATCTATCTGCATATATT+GGG | - | chr4.3:1991716-1991735 | MS.gene015737:intron | 30.0% | |
| CCATATATAAGTTTCATGGA+TGG | - | chr4.3:1989435-1989454 | MS.gene015737:intron | 30.0% | |
| CCATCCATGAAACTTATATA+TGG | + | chr4.3:1989438-1989457 | None:intergenic | 30.0% | |
| CCTAAAATATGCAGCATAAT+AGG | + | chr4.3:1989365-1989384 | None:intergenic | 30.0% | |
| CCTGAGATAATTTCTTCATT+TGG | - | chr4.3:1990572-1990591 | MS.gene015737:intron | 30.0% | |
| GAGATAATTTCTTCATTTGG+AGG | - | chr4.3:1990575-1990594 | MS.gene015737:intron | 30.0% | |
| GATGATTTAATAAGGACTGA+GGG | - | chr4.3:1989785-1989804 | MS.gene015737:intron | 30.0% | |
| GTACTTGTTTGTCAAGAAAA+GGG | + | chr4.3:1990863-1990882 | None:intergenic | 30.0% | |
| TAGATTATAAAGAGTTTGCC+TGG | + | chr4.3:1991374-1991393 | None:intergenic | 30.0% | |
| TATGACTCAATCATACATAC+CGG | + | chr4.3:1988265-1988284 | None:intergenic | 30.0% | |
| TTAAATATGCAACTCTTGCT+CGG | - | chr4.3:1989013-1989032 | MS.gene015737:intron | 30.0% | |
| TTCATGGATGGAATAACAAT+GGG | - | chr4.3:1989447-1989466 | MS.gene015737:intron | 30.0% | |
| TTGCAGATGTTCTACTTATT+TGG | - | chr4.3:1988372-1988391 | MS.gene015737:intron | 30.0% | |
| TTTCATGGATGGAATAACAA+TGG | - | chr4.3:1989446-1989465 | MS.gene015737:intron | 30.0% | |
| ! | AGTATTAGTGGATAAAGATC+AGG | - | chr4.3:1991115-1991134 | MS.gene015737:intron | 30.0% |
| ! | CATATTTCCATAAGCTTTTG+AGG | - | chr4.3:1991542-1991561 | MS.gene015737:intron | 30.0% |
| ! | CCTATTATGCTGCATATTTT+AGG | - | chr4.3:1989362-1989381 | MS.gene015737:intron | 30.0% |
| ! | GGTTCCTTTTCCTTTTTTTT+TGG | - | chr4.3:1990941-1990960 | MS.gene015737:intron | 30.0% |
| ! | GTATTCATTTTGAATTGGCA+TGG | + | chr4.3:1988841-1988860 | None:intergenic | 30.0% |
| ! | TGAGTATAAAAGCATAAACG+GGG | + | chr4.3:1991336-1991355 | None:intergenic | 30.0% |
| ! | TTTTGCACAAGTTGTTAAAG+TGG | - | chr4.3:1989322-1989341 | MS.gene015737:intron | 30.0% |
| !! | AGAGAAGAAAGGTTTGATTT+TGG | + | chr4.3:1987728-1987747 | None:intergenic | 30.0% |
| !! | ATACAAGTTTGTTGCCAAAA+GGG | + | chr4.3:1990133-1990152 | None:intergenic | 30.0% |
| !! | CTATTGGTTATTTAGTTCTC+AGG | - | chr4.3:1990469-1990488 | MS.gene015737:intron | 30.0% |
| !! | TAGGTGTTGATTGTTTATCA+TGG | - | chr4.3:1988038-1988057 | MS.gene015737:intron | 30.0% |
| !! | TTGAATATTTTACTGACTGC+AGG | - | chr4.3:1989997-1990016 | MS.gene015737:CDS | 30.0% |
| !!! | ATAACAATGGGTTTTGGAAT+TGG | - | chr4.3:1989459-1989478 | MS.gene015737:intron | 30.0% |
| !!! | GCATTTTTTACATGCTTCAT+TGG | - | chr4.3:1988551-1988570 | MS.gene015737:intron | 30.0% |
| !!! | TCTACTTATTTGGTTTTGAG+TGG | - | chr4.3:1988382-1988401 | MS.gene015737:intron | 30.0% |
| AAAAGACATCATGCTGACAA+TGG | + | chr4.3:1988910-1988929 | None:intergenic | 35.0% | |
| AAACGACTGTGAATTATCCA+CGG | - | chr4.3:1990912-1990931 | MS.gene015737:intron | 35.0% | |
| AAAGTTAGGTTCATTCAAGG+AGG | - | chr4.3:1990107-1990126 | MS.gene015737:intron | 35.0% | |
| AAATCTTTGTGGTGCAGAAA+TGG | - | chr4.3:1988146-1988165 | MS.gene015737:intron | 35.0% | |
| AAGTACTTTGATGTCCTGAT+GGG | + | chr4.3:1990498-1990517 | None:intergenic | 35.0% | |
| AATTGCACCTATACTTGGTT+TGG | + | chr4.3:1991202-1991221 | None:intergenic | 35.0% | |
| ACCAGAACACATTTGACATT+TGG | + | chr4.3:1988213-1988232 | None:intergenic | 35.0% | |
| ATATGAGCAAATCCTACATC+TGG | + | chr4.3:1989675-1989694 | None:intergenic | 35.0% | |
| ATCGTATCATAACAGAGGTA+TGG | - | chr4.3:1989502-1989521 | MS.gene015737:intron | 35.0% | |
| ATGTCAATTGCACCTATACT+TGG | + | chr4.3:1991207-1991226 | None:intergenic | 35.0% | |
| ATTAATGGTCAATGCAGGTA+TGG | - | chr4.3:1988428-1988447 | MS.gene015737:intron | 35.0% | |
| CACAAAAAGGAGAAATGGAA+GGG | + | chr4.3:1989826-1989845 | None:intergenic | 35.0% | |
| CAGATGCAATTCAAAGGTTA+AGG | + | chr4.3:1989090-1989109 | None:intergenic | 35.0% | |
| CCAGAACACATTTGACATTT+GGG | + | chr4.3:1988212-1988231 | None:intergenic | 35.0% | |
| CCCAATATATGCAGATAGAT+TGG | + | chr4.3:1991719-1991738 | None:intergenic | 35.0% | |
| CGATGATTTAATAAGGACTG+AGG | - | chr4.3:1989784-1989803 | MS.gene015737:intron | 35.0% | |
| CTGCAGATAAACTAAGATCT+CGG | + | chr4.3:1988705-1988724 | None:intergenic | 35.0% | |
| CTTATATTACCGACACAATC+AGG | + | chr4.3:1990268-1990287 | None:intergenic | 35.0% | |
| CTTCAAGATAGTACAATTGG+TGG | - | chr4.3:1991288-1991307 | MS.gene015737:intron | 35.0% | |
| CTTTATCCACTAATACTGCT+CGG | + | chr4.3:1991112-1991131 | None:intergenic | 35.0% | |
| GAAAAGTTGCATAGCAAAGA+AGG | + | chr4.3:1988619-1988638 | None:intergenic | 35.0% | |
| GCACTTCAAGATAGTACAAT+TGG | - | chr4.3:1991285-1991304 | MS.gene015737:intron | 35.0% | |
| TAGTGCACAAAAAGGAGAAA+TGG | + | chr4.3:1989831-1989850 | None:intergenic | 35.0% | |
| TATGAGCAAATCCTACATCT+GGG | + | chr4.3:1989674-1989693 | None:intergenic | 35.0% | |
| TCATAATTGCCTTCTAAACC+AGG | - | chr4.3:1991353-1991372 | MS.gene015737:intron | 35.0% | |
| TCTTCAGCCATTGAAGAAAT+GGG | + | chr4.3:1987757-1987776 | None:intergenic | 35.0% | |
| TGCAGGTATGGATATTAAAG+GGG | - | chr4.3:1988440-1988459 | MS.gene015737:intron | 35.0% | |
| TGCATGCAGAAAATTATTGG+AGG | - | chr4.3:1991226-1991245 | MS.gene015737:CDS | 35.0% | |
| TTAGAATGTACTTCCAGTTG+AGG | - | chr4.3:1989053-1989072 | MS.gene015737:CDS | 35.0% | |
| TTCTTCAGCCATTGAAGAAA+TGG | + | chr4.3:1987758-1987777 | None:intergenic | 35.0% | |
| TTTGTCAAGAAAAGGGAGAA+GGG | + | chr4.3:1990856-1990875 | None:intergenic | 35.0% | |
| ! | AAAGTACTTTGATGTCCTGA+TGG | + | chr4.3:1990499-1990518 | None:intergenic | 35.0% |
| ! | AACAAGCCAATTCCATTTTC+TGG | + | chr4.3:1989651-1989670 | None:intergenic | 35.0% |
| ! | AACATAACTGTGGGTTAAAG+AGG | + | chr4.3:1991880-1991899 | None:intergenic | 35.0% |
| ! | ATACCTGCATTGACCATTAA+TGG | + | chr4.3:1988429-1988448 | None:intergenic | 35.0% |
| ! | ATACTCAGTTTTCATTACGC+TGG | + | chr4.3:1991042-1991061 | None:intergenic | 35.0% |
| ! | ATGAAAGGATGATTCTAGCT+AGG | - | chr4.3:1988019-1988038 | MS.gene015737:intron | 35.0% |
| ! | ATTGAGACCTTTTGCACTAA+AGG | + | chr4.3:1988498-1988517 | None:intergenic | 35.0% |
| ! | CAGCTTAAAGTGAGTCTTTT+TGG | - | chr4.3:1991432-1991451 | MS.gene015737:intron | 35.0% |
| ! | GTTTTTCCACTTACTTTCTG+TGG | - | chr4.3:1989958-1989977 | MS.gene015737:intron | 35.0% |
| ! | TGTAGGATTTGCTCATATAG+CGG | - | chr4.3:1989677-1989696 | MS.gene015737:intron | 35.0% |
| !! | AAAGGCACCGTTAATTCTAA+CGG | - | chr4.3:1987784-1987803 | MS.gene015737:intron | 35.0% |
| !! | CATACAAGTTTGTTGCCAAA+AGG | + | chr4.3:1990134-1990153 | None:intergenic | 35.0% |
| !! | GATGCAATATATGTTGGCTT+AGG | - | chr4.3:1990063-1990082 | MS.gene015737:CDS | 35.0% |
| !! | GATGGAATAACAATGGGTTT+TGG | - | chr4.3:1989453-1989472 | MS.gene015737:intron | 35.0% |
| !! | TCTATTTCTAGTTGCTGAGT+GGG | - | chr4.3:1990795-1990814 | MS.gene015737:intron | 35.0% |
| !! | TTCTATTTCTAGTTGCTGAG+TGG | - | chr4.3:1990794-1990813 | MS.gene015737:intron | 35.0% |
| !!! | CTTATTTGGTTTTGAGTGGT+AGG | - | chr4.3:1988386-1988405 | MS.gene015737:intron | 35.0% |
| !!! | GTTTTGAGAGTCACCATTAA+TGG | - | chr4.3:1988413-1988432 | MS.gene015737:intron | 35.0% |
| AAAAGGAGAAATGGAAGGGT+TGG | + | chr4.3:1989822-1989841 | None:intergenic | 40.0% | |
| AAACATCTAGATGTGGTCTC+TGG | - | chr4.3:1989892-1989911 | MS.gene015737:intron | 40.0% | |
| AAAGTGGAAACCATCAAGGT+TGG | - | chr4.3:1991964-1991983 | MS.gene015737:CDS | 40.0% | |
| AAGAGTTTGCCTGGTTTAGA+AGG | + | chr4.3:1991365-1991384 | None:intergenic | 40.0% | |
| AAGCACACCTTTAGTGCAAA+AGG | - | chr4.3:1988488-1988507 | MS.gene015737:intron | 40.0% | |
| AATGAACCTAACTTTCCCGA+TGG | + | chr4.3:1990102-1990121 | None:intergenic | 40.0% | |
| AGACCTCAATCACATCTGAT+AGG | + | chr4.3:1988762-1988781 | None:intergenic | 40.0% | |
| AGAGACACTGAACTTCCTTA+TGG | - | chr4.3:1989158-1989177 | MS.gene015737:CDS | 40.0% | |
| AGCAAGATATGAGTCAAACC+CGG | - | chr4.3:1990520-1990539 | MS.gene015737:intron | 40.0% | |
| AGTACTTTGATGTCCTGATG+GGG | + | chr4.3:1990497-1990516 | None:intergenic | 40.0% | |
| ATAAGGAAGTTCAGTGTCTC+TGG | + | chr4.3:1989159-1989178 | None:intergenic | 40.0% | |
| ATCATACATACCGGCACAAA+AGG | + | chr4.3:1988256-1988275 | None:intergenic | 40.0% | |
| ATCTTGGATTGACTGGAAAG+AGG | - | chr4.3:1990025-1990044 | MS.gene015737:CDS | 40.0% | |
| ATGGCTGAAGAATTCGTCAA+AGG | - | chr4.3:1987766-1987785 | MS.gene015737:intron | 40.0% | |
| CAACCTATCAGATGTGATTG+AGG | - | chr4.3:1988756-1988775 | MS.gene015737:intron | 40.0% | |
| CACACACAGAAACATCCATA+AGG | + | chr4.3:1989176-1989195 | None:intergenic | 40.0% | |
| CATCTGCTTCTCTCATTACA+GGG | - | chr4.3:1989104-1989123 | MS.gene015737:CDS | 40.0% | |
| CCAACATATATTGCATCTGC+TGG | + | chr4.3:1990060-1990079 | None:intergenic | 40.0% | |
| CCAGCAGATGCAATATATGT+TGG | - | chr4.3:1990057-1990076 | MS.gene015737:CDS | 40.0% | |
| CCCAAATGTCAAATGTGTTC+TGG | - | chr4.3:1988209-1988228 | MS.gene015737:intron | 40.0% | |
| CCTCTGTTATGATACGATAG+CGG | + | chr4.3:1989500-1989519 | None:intergenic | 40.0% | |
| CGAGATCTTAGTTTATCTGC+AGG | - | chr4.3:1988703-1988722 | MS.gene015737:intron | 40.0% | |
| GAGAAGCAGATGCAATTCAA+AGG | + | chr4.3:1989096-1989115 | None:intergenic | 40.0% | |
| GAGATTCCACAGAAAGTAAG+TGG | + | chr4.3:1989967-1989986 | None:intergenic | 40.0% | |
| GATCTTAGTTTATCTGCAGG+CGG | - | chr4.3:1988706-1988725 | MS.gene015737:intron | 40.0% | |
| GCAATGCCAGAAAATGGAAT+TGG | - | chr4.3:1989642-1989661 | MS.gene015737:CDS | 40.0% | |
| GCACAAAAAGGAGAAATGGA+AGG | + | chr4.3:1989827-1989846 | None:intergenic | 40.0% | |
| GGCAACACCGTTAGAATTAA+CGG | + | chr4.3:1987794-1987813 | None:intergenic | 40.0% | |
| GGGAAAGTTAGGTTCATTCA+AGG | - | chr4.3:1990104-1990123 | MS.gene015737:intron | 40.0% | |
| GGTTGTTGCTGAAATACAGA+AGG | - | chr4.3:1988461-1988480 | MS.gene015737:intron | 40.0% | |
| GTTCTTGCAATGCCAGAAAA+TGG | - | chr4.3:1989636-1989655 | MS.gene015737:CDS | 40.0% | |
| GTTTGTCAAGAAAAGGGAGA+AGG | + | chr4.3:1990857-1990876 | None:intergenic | 40.0% | |
| TCACCATTAATGGTCAATGC+AGG | - | chr4.3:1988423-1988442 | MS.gene015737:intron | 40.0% | |
| TCTTGGATTGACTGGAAAGA+GGG | - | chr4.3:1990026-1990045 | MS.gene015737:CDS | 40.0% | |
| TGCATTCACCATATGTGTCA+TGG | - | chr4.3:1990308-1990327 | MS.gene015737:CDS | 40.0% | |
| TGCTCCTAAGGGTTTAAAGA+CGG | + | chr4.3:1992017-1992036 | None:intergenic | 40.0% | |
| TTCTGAACAAACTACGCTGA+TGG | + | chr4.3:1990383-1990402 | None:intergenic | 40.0% | |
| TTCTGTGGAATCTCCGAATT+CGG | - | chr4.3:1989973-1989992 | MS.gene015737:intron | 40.0% | |
| TTGTTCGCCAAACCAAGTAT+AGG | - | chr4.3:1991192-1991211 | MS.gene015737:intron | 40.0% | |
| TTTCCGACCCATTTCTTCAA+TGG | - | chr4.3:1987747-1987766 | MS.gene015737:intron | 40.0% | |
| ! | AACCTTGATGGTTTCCACTT+TGG | + | chr4.3:1991965-1991984 | None:intergenic | 40.0% |
| ! | ACCTTGATGGTTTCCACTTT+GGG | + | chr4.3:1991964-1991983 | None:intergenic | 40.0% |
| ! | ATACATTGGCCTGATTGTGT+CGG | - | chr4.3:1990256-1990275 | MS.gene015737:CDS | 40.0% |
| ! | GCAAAGAAGGATGATGATGA+TGG | + | chr4.3:1988606-1988625 | None:intergenic | 40.0% |
| ! | GCAGATAGATTGGTCATGTT+TGG | + | chr4.3:1991709-1991728 | None:intergenic | 40.0% |
| ! | TTCCAGTTGAGGTTCTAATG+AGG | - | chr4.3:1989064-1989083 | MS.gene015737:CDS | 40.0% |
| ! | TTTTCATTACGCTGGTAAGC+TGG | + | chr4.3:1991034-1991053 | None:intergenic | 40.0% |
| !!! | GGTTTTGGAATTGGCTTATC+TGG | - | chr4.3:1989468-1989487 | MS.gene015737:intron | 40.0% |
| !!! | TTGGTTTTGAGTGGTAGGTA+AGG | - | chr4.3:1988391-1988410 | MS.gene015737:intron | 40.0% |
| ACCCAAAGTGGAAACCATCA+AGG | - | chr4.3:1991960-1991979 | MS.gene015737:CDS | 45.0% | |
| AGGAACACACTATGTGCCAT+CGG | - | chr4.3:1990083-1990102 | MS.gene015737:intron | 45.0% | |
| ATGGGTCGGAAAGAGAAGAA+AGG | + | chr4.3:1987739-1987758 | None:intergenic | 45.0% | |
| ATTCACTGCAGAACCCAAAG+TGG | - | chr4.3:1991948-1991967 | MS.gene015737:CDS | 45.0% | |
| ATTCTCGATGACCGCTTACT+TGG | - | chr4.3:1988676-1988695 | MS.gene015737:intron | 45.0% | |
| CAGCCATTGAAGAAATGGGT+CGG | + | chr4.3:1987753-1987772 | None:intergenic | 45.0% | |
| CCGCTATCGTATCATAACAG+AGG | - | chr4.3:1989497-1989516 | MS.gene015737:intron | 45.0% | |
| CTGCGACATGATTTCGTAGA+AGG | - | chr4.3:1991083-1991102 | MS.gene015737:intron | 45.0% | |
| CTTTAAACCCTTAGGAGCAG+AGG | - | chr4.3:1992018-1992037 | MS.gene015737:CDS | 45.0% | |
| GAAGCCGTCTTTAAACCCTT+AGG | - | chr4.3:1992010-1992029 | MS.gene015737:CDS | 45.0% | |
| GATCTCGGTTACCAAGTAAG+CGG | + | chr4.3:1988690-1988709 | None:intergenic | 45.0% | |
| GCATCTGCTTCTCTCATTAC+AGG | - | chr4.3:1989103-1989122 | MS.gene015737:CDS | 45.0% | |
| GGTGCTTATCTTGGATTGAC+TGG | - | chr4.3:1990018-1990037 | MS.gene015737:CDS | 45.0% | |
| TATGTGCCATCGGGAAAGTT+AGG | - | chr4.3:1990093-1990112 | MS.gene015737:intron | 45.0% | |
| TCAACTTCCTCCAACCTTGA+TGG | + | chr4.3:1991977-1991996 | None:intergenic | 45.0% | |
| TTTAACTGTGCCTCACTGTC+CGG | + | chr4.3:1990542-1990561 | None:intergenic | 45.0% | |
| ! | CTGGAAGTACATTCTAACCC+AGG | + | chr4.3:1989050-1989069 | None:intergenic | 45.0% |
| ! | GGAATTGGCTTATCTGGTCA+TGG | - | chr4.3:1989474-1989493 | MS.gene015737:intron | 45.0% |
| ! | TTCATGGCGTTGAGAGCTTT+GGG | + | chr4.3:1987835-1987854 | None:intergenic | 45.0% |
| ! | TTCATTCAAGGAGGCCCTTT+TGG | - | chr4.3:1990116-1990135 | MS.gene015737:intron | 45.0% |
| !! | ACTCTTGCTCGGTGTTAGTT+TGG | - | chr4.3:1989024-1989043 | MS.gene015737:intron | 45.0% |
| !! | ATTGGCTTGTTCCCAGATGT+AGG | - | chr4.3:1989660-1989679 | MS.gene015737:CDS | 45.0% |
| !! | GAGCTCAAATGCTGGTTCTA+TGG | - | chr4.3:1991740-1991759 | MS.gene015737:intron | 45.0% |
| !! | GATGATGATGATGGCGAAAG+CGG | + | chr4.3:1988597-1988616 | None:intergenic | 45.0% |
| !! | AAAAAAAAATATGTAAAATT+TGG | - | chr4.3:1987975-1987994 | MS.gene015737:intron | 5.0% |
| !! | AAAAAAAATATGTAAAATTT+GGG | - | chr4.3:1987976-1987995 | MS.gene015737:intron | 5.0% |
| !! | AAAATTATAATATAATACAT+TGG | - | chr4.3:1990242-1990261 | MS.gene015737:CDS | 5.0% |
| !!! | GTATTATATTATAATTTTAT+TGG | + | chr4.3:1990240-1990259 | None:intergenic | 5.0% |
| AAACCCTTAGGAGCAGAGGT+GGG | - | chr4.3:1992022-1992041 | MS.gene015737:CDS | 50.0% | |
| AAGACGGCTTCAACCTCACT+TGG | + | chr4.3:1992001-1992020 | None:intergenic | 50.0% | |
| AGGAAGTTCAGTGTCTCTGG+AGG | + | chr4.3:1989156-1989175 | None:intergenic | 50.0% | |
| AGGTGTCCGAGCAGTATTAG+TGG | - | chr4.3:1991103-1991122 | MS.gene015737:intron | 50.0% | |
| CATATAGCGGCTCAAAGTCC+AGG | - | chr4.3:1989690-1989709 | MS.gene015737:intron | 50.0% | |
| CATTAGAGTCAGTGCTCGAC+TGG | + | chr4.3:1990643-1990662 | None:intergenic | 50.0% | |
| CTGACTGCAGGTGCTTATCT+TGG | - | chr4.3:1990009-1990028 | MS.gene015737:CDS | 50.0% | |
| GCATTGCAAGAACAGTCCTC+TGG | + | chr4.3:1989629-1989648 | None:intergenic | 50.0% | |
| GGAACACACTATGTGCCATC+GGG | - | chr4.3:1990084-1990103 | MS.gene015737:intron | 50.0% | |
| GGCCTCATTAGAACCTCAAC+TGG | + | chr4.3:1989069-1989088 | None:intergenic | 50.0% | |
| GTGAATTATCCACGGTGAGC+AGG | - | chr4.3:1990920-1990939 | MS.gene015737:intron | 50.0% | |
| GTGGAAACCATCAAGGTTGG+AGG | - | chr4.3:1991967-1991986 | MS.gene015737:CDS | 50.0% | |
| TAAACCCTTAGGAGCAGAGG+TGG | - | chr4.3:1992021-1992040 | MS.gene015737:CDS | 50.0% | |
| TAGTTCTCAGGATCCCCATC+AGG | - | chr4.3:1990481-1990500 | MS.gene015737:intron | 50.0% | |
| TATTGGGGGAGCTCAAATGC+TGG | - | chr4.3:1991732-1991751 | MS.gene015737:intron | 50.0% | |
| TTAACTGTGCCTCACTGTCC+GGG | + | chr4.3:1990541-1990560 | None:intergenic | 50.0% | |
| TTACCAACAGCTCCTTCTCC+TGG | + | chr4.3:1989711-1989730 | None:intergenic | 50.0% | |
| TTTGCCTAGTGCAGAGGCAA+CGG | + | chr4.3:1990893-1990912 | None:intergenic | 50.0% | |
| ! | CTGAGTATCGCATTGCCTTG+AGG | - | chr4.3:1991054-1991073 | MS.gene015737:intron | 50.0% |
| ! | GGAGGAAGTTGATCCAAGTG+AGG | - | chr4.3:1991985-1992004 | MS.gene015737:CDS | 50.0% |
| ! | GTTCATGGCGTTGAGAGCTT+TGG | + | chr4.3:1987836-1987855 | None:intergenic | 50.0% |
| ! | TCATGGCGTTGAGAGCTTTG+GGG | + | chr4.3:1987834-1987853 | None:intergenic | 50.0% |
| !! | CAGTCGAGCACTGACTCTAA+TGG | - | chr4.3:1990641-1990660 | MS.gene015737:intron | 50.0% |
| !!! | AGAAGGGAGCACCTTTTGCA+AGG | + | chr4.3:1990840-1990859 | None:intergenic | 50.0% |
| !!! | GTCGTTTTTGCCTAGTGCAG+AGG | + | chr4.3:1990899-1990918 | None:intergenic | 50.0% |
| AGTCCAGGAGAAGGAGCTGT+TGG | - | chr4.3:1989705-1989724 | MS.gene015737:intron | 55.0% | |
| ATGTCGCAGCGAAGACCTCA+AGG | + | chr4.3:1991072-1991091 | None:intergenic | 55.0% | |
| GAAAAGGAACCTGCTCACCG+TGG | + | chr4.3:1990932-1990951 | None:intergenic | 55.0% | |
| GCTCTCAACGCCATGAACCT+AGG | - | chr4.3:1987838-1987857 | MS.gene015737:intron | 55.0% | |
| GCTCTCCAAGGCCTTGCAAA+AGG | - | chr4.3:1990826-1990845 | MS.gene015737:intron | 55.0% | |
| TGAGTCAAACCCGGACAGTG+AGG | - | chr4.3:1990529-1990548 | MS.gene015737:intron | 55.0% | |
| TGGGCTGATGAAGCTCTCCA+AGG | - | chr4.3:1990814-1990833 | MS.gene015737:intron | 55.0% | |
| ! | ATACCGGCACAAAAGGCACG+AGG | + | chr4.3:1988249-1988268 | None:intergenic | 55.0% |
| ! | GAGCACCTTTTGCAAGGCCT+TGG | + | chr4.3:1990834-1990853 | None:intergenic | 55.0% |
| ! | TACCGGCACAAAAGGCACGA+GGG | + | chr4.3:1988248-1988267 | None:intergenic | 55.0% |
| !! | GCTCGGTGTTAGTTTGGCCT+GGG | - | chr4.3:1989030-1989049 | MS.gene015737:intron | 55.0% |
| !! | TGCTCGGTGTTAGTTTGGCC+TGG | - | chr4.3:1989029-1989048 | MS.gene015737:intron | 55.0% |
| GCGGCTCAAAGTCCAGGAGA+AGG | - | chr4.3:1989696-1989715 | MS.gene015737:intron | 60.0% | |
| TCGCCCACCTCTGCTCCTAA+GGG | + | chr4.3:1992028-1992047 | None:intergenic | 60.0% | |
| TCTGCCGTTGCCTCTGCACT+AGG | - | chr4.3:1990886-1990905 | MS.gene015737:intron | 60.0% | |
| ! | ACCGGCACAAAAGGCACGAG+GGG | + | chr4.3:1988247-1988266 | None:intergenic | 60.0% |
| ! | TCCCCTCGTGCCTTTTGTGC+CGG | - | chr4.3:1988243-1988262 | MS.gene015737:intron | 60.0% |
| !! | GAGAGCTTTGGGGCGATCGA+GGG | + | chr4.3:1987824-1987843 | None:intergenic | 60.0% |
| !! | TGAGAGCTTTGGGGCGATCG+AGG | + | chr4.3:1987825-1987844 | None:intergenic | 60.0% |
| CTCGCCCACCTCTGCTCCTA+AGG | + | chr4.3:1992029-1992048 | None:intergenic | 65.0% | |
| GGGGCGATCGAGGGTGAGAA+GGG | + | chr4.3:1987815-1987834 | None:intergenic | 65.0% | |
| TGGGGCGATCGAGGGTGAGA+AGG | + | chr4.3:1987816-1987835 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 1987652 | 1992060 | 1987652 | ID=MS.gene015737 |
| chr4.3 | mRNA | 1987652 | 1992060 | 1987652 | ID=MS.gene015737.t1;Parent=MS.gene015737 |
| chr4.3 | exon | 1991853 | 1992060 | 1991853 | ID=MS.gene015737.t1.exon1;Parent=MS.gene015737.t1 |
| chr4.3 | CDS | 1991853 | 1992060 | 1991853 | ID=cds.MS.gene015737.t1;Parent=MS.gene015737.t1 |
| chr4.3 | exon | 1991448 | 1991549 | 1991448 | ID=MS.gene015737.t1.exon2;Parent=MS.gene015737.t1 |
| chr4.3 | CDS | 1991448 | 1991549 | 1991448 | ID=cds.MS.gene015737.t1;Parent=MS.gene015737.t1 |
| chr4.3 | exon | 1991203 | 1991267 | 1991203 | ID=MS.gene015737.t1.exon3;Parent=MS.gene015737.t1 |
| chr4.3 | CDS | 1991203 | 1991267 | 1991203 | ID=cds.MS.gene015737.t1;Parent=MS.gene015737.t1 |
| chr4.3 | exon | 1990194 | 1990328 | 1990194 | ID=MS.gene015737.t1.exon4;Parent=MS.gene015737.t1 |
| chr4.3 | CDS | 1990194 | 1990328 | 1990194 | ID=cds.MS.gene015737.t1;Parent=MS.gene015737.t1 |
| chr4.3 | exon | 1989986 | 1990082 | 1989986 | ID=MS.gene015737.t1.exon5;Parent=MS.gene015737.t1 |
| chr4.3 | CDS | 1989986 | 1990082 | 1989986 | ID=cds.MS.gene015737.t1;Parent=MS.gene015737.t1 |
| chr4.3 | exon | 1989564 | 1989693 | 1989564 | ID=MS.gene015737.t1.exon6;Parent=MS.gene015737.t1 |
| chr4.3 | CDS | 1989564 | 1989693 | 1989564 | ID=cds.MS.gene015737.t1;Parent=MS.gene015737.t1 |
| chr4.3 | exon | 1989050 | 1989228 | 1989050 | ID=MS.gene015737.t1.exon7;Parent=MS.gene015737.t1 |
| chr4.3 | CDS | 1989050 | 1989228 | 1989050 | ID=cds.MS.gene015737.t1;Parent=MS.gene015737.t1 |
| chr4.3 | exon | 1988779 | 1988906 | 1988779 | ID=MS.gene015737.t1.exon8;Parent=MS.gene015737.t1 |
| chr4.3 | CDS | 1988779 | 1988906 | 1988779 | ID=cds.MS.gene015737.t1;Parent=MS.gene015737.t1 |
| chr4.3 | exon | 1988576 | 1988677 | 1988576 | ID=MS.gene015737.t1.exon9;Parent=MS.gene015737.t1 |
| chr4.3 | CDS | 1988576 | 1988677 | 1988576 | ID=cds.MS.gene015737.t1;Parent=MS.gene015737.t1 |
| chr4.3 | exon | 1987652 | 1987753 | 1987652 | ID=MS.gene015737.t1.exon10;Parent=MS.gene015737.t1 |
| chr4.3 | CDS | 1987652 | 1987753 | 1987652 | ID=cds.MS.gene015737.t1;Parent=MS.gene015737.t1 |
| Gene Sequence |
| Protein sequence |
