Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05932.t1 | XP_003630825.2 | 96.7 | 419 | 9 | 3 | 1 | 415 | 1 | 418 | 7.80E-221 | 776.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05932.t1 | Q9T0K7 | 73.3 | 386 | 99 | 1 | 34 | 415 | 36 | 421 | 9.2e-162 | 571.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05932.t1 | I3S5F5 | 96.7 | 419 | 9 | 3 | 1 | 415 | 1 | 418 | 5.6e-221 | 776.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene05932 | MS.gene000261 | PPI |
| MS.gene05932 | MS.gene020199 | PPI |
| MS.gene05932 | MS.gene33113 | PPI |
| MS.gene05932 | MS.gene39279 | PPI |
| MS.gene05932 | MS.gene019194 | PPI |
| MS.gene05932 | MS.gene27992 | PPI |
| MS.gene05932 | MS.gene022768 | PPI |
| MS.gene05932 | MS.gene64726 | PPI |
| MS.gene05932 | MS.gene010581 | PPI |
| MS.gene05932 | MS.gene058907 | PPI |
| MS.gene05932 | MS.gene022542 | PPI |
| MS.gene05932 | MS.gene030881 | PPI |
| MS.gene05932 | MS.gene59431 | PPI |
| MS.gene05932 | MS.gene62781 | PPI |
| MS.gene05932 | MS.gene016092 | PPI |
| MS.gene05932 | MS.gene051489 | PPI |
| MS.gene05932 | MS.gene47956 | PPI |
| MS.gene05932 | MS.gene69510 | PPI |
| MS.gene05932 | MS.gene049135 | PPI |
| MS.gene05932 | MS.gene058482 | PPI |
| MS.gene05932 | MS.gene015737 | PPI |
| MS.gene05932 | MS.gene61573 | PPI |
| MS.gene05932 | MS.gene04775 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05932.t1 | MTR_8g103840 | 98.143 | 377 | 7 | 0 | 39 | 415 | 1 | 377 | 0.0 | 761 |
| MS.gene05932.t1 | MTR_8g103840 | 92.124 | 419 | 24 | 5 | 1 | 415 | 1 | 414 | 0.0 | 750 |
| MS.gene05932.t1 | MTR_8g103840 | 98.403 | 313 | 5 | 0 | 103 | 415 | 4 | 316 | 0.0 | 631 |
| MS.gene05932.t1 | MTR_8g103840 | 97.611 | 293 | 7 | 0 | 123 | 415 | 8 | 300 | 0.0 | 587 |
| MS.gene05932.t1 | MTR_8g103840 | 98.134 | 268 | 5 | 0 | 148 | 415 | 1 | 268 | 0.0 | 540 |
| MS.gene05932.t1 | MTR_8g010580 | 36.034 | 358 | 207 | 10 | 55 | 409 | 22 | 360 | 1.64e-53 | 182 |
| MS.gene05932.t1 | MTR_3g046330 | 30.769 | 364 | 226 | 11 | 51 | 410 | 19 | 360 | 9.82e-49 | 170 |
| MS.gene05932.t1 | MTR_8g005990 | 33.151 | 365 | 217 | 12 | 48 | 406 | 40 | 383 | 4.67e-48 | 169 |
| MS.gene05932.t1 | MTR_8g010580 | 34.821 | 336 | 197 | 10 | 55 | 387 | 22 | 338 | 2.55e-45 | 160 |
| MS.gene05932.t1 | MTR_1g014040 | 31.356 | 354 | 215 | 12 | 58 | 405 | 58 | 389 | 3.93e-45 | 161 |
| MS.gene05932.t1 | MTR_8g005990 | 32.055 | 365 | 198 | 12 | 48 | 406 | 40 | 360 | 7.70e-41 | 149 |
| MS.gene05932.t1 | MTR_8g010580 | 35.424 | 271 | 165 | 7 | 55 | 325 | 22 | 282 | 2.01e-37 | 139 |
| MS.gene05932.t1 | MTR_4g100350 | 25.103 | 243 | 161 | 7 | 36 | 271 | 34 | 262 | 6.97e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05932.t1 | AT4G13360 | 73.316 | 386 | 99 | 1 | 34 | 415 | 36 | 421 | 0.0 | 592 |
| MS.gene05932.t1 | AT3G24360 | 67.980 | 406 | 122 | 1 | 18 | 415 | 13 | 418 | 0.0 | 577 |
| MS.gene05932.t1 | AT3G24360 | 64.532 | 406 | 132 | 3 | 18 | 415 | 13 | 414 | 0.0 | 544 |
| MS.gene05932.t1 | AT3G24360 | 70.288 | 313 | 93 | 0 | 103 | 415 | 4 | 316 | 3.22e-166 | 469 |
| MS.gene05932.t1 | AT3G24360 | 69.153 | 295 | 90 | 1 | 121 | 415 | 21 | 314 | 2.30e-153 | 436 |
| MS.gene05932.t1 | AT3G24360 | 69.072 | 291 | 90 | 0 | 125 | 415 | 3 | 293 | 8.76e-153 | 434 |
| MS.gene05932.t1 | AT3G24360 | 67.905 | 296 | 87 | 1 | 18 | 305 | 13 | 308 | 4.01e-147 | 422 |
| MS.gene05932.t1 | AT5G65940 | 36.944 | 360 | 205 | 9 | 53 | 409 | 19 | 359 | 2.13e-65 | 214 |
| MS.gene05932.t1 | AT5G65940 | 36.944 | 360 | 205 | 9 | 53 | 409 | 19 | 359 | 2.13e-65 | 214 |
| MS.gene05932.t1 | AT2G30660 | 35.112 | 356 | 209 | 9 | 51 | 403 | 13 | 349 | 1.44e-61 | 204 |
| MS.gene05932.t1 | AT5G65940 | 36.607 | 336 | 191 | 9 | 53 | 385 | 19 | 335 | 3.66e-58 | 194 |
| MS.gene05932.t1 | AT2G30650 | 34.890 | 364 | 211 | 9 | 53 | 411 | 15 | 357 | 3.67e-58 | 195 |
| MS.gene05932.t1 | AT2G30660 | 35.077 | 325 | 189 | 9 | 82 | 403 | 12 | 317 | 7.86e-55 | 185 |
| MS.gene05932.t1 | AT1G06550 | 32.958 | 355 | 214 | 11 | 53 | 404 | 21 | 354 | 3.21e-50 | 174 |
| MS.gene05932.t1 | AT5G65940 | 34.663 | 326 | 191 | 9 | 53 | 375 | 19 | 325 | 3.45e-49 | 170 |
| MS.gene05932.t1 | AT4G31810 | 33.144 | 353 | 210 | 11 | 58 | 405 | 56 | 387 | 1.65e-48 | 170 |
| MS.gene05932.t1 | AT2G30650 | 32.317 | 328 | 196 | 9 | 53 | 375 | 15 | 321 | 1.99e-41 | 149 |
| MS.gene05932.t1 | AT3G60510 | 32.295 | 353 | 215 | 10 | 58 | 406 | 52 | 384 | 2.54e-41 | 151 |
| MS.gene05932.t1 | AT3G60510 | 30.933 | 375 | 216 | 11 | 58 | 406 | 52 | 409 | 1.99e-38 | 144 |
| MS.gene05932.t1 | AT3G60510 | 32.342 | 269 | 170 | 8 | 58 | 325 | 52 | 309 | 8.43e-29 | 115 |
Find 116 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGAAGAAAGGTTTGATTT+TGG | 0.204953 | 4.4:+2838697 | None:intergenic |
| ACCTTGATGGTTTCCACTTT+GGG | 0.233100 | 4.4:+2834420 | None:intergenic |
| TTCATGGCGTTGAGAGCTTT+GGG | 0.269255 | 4.4:+2838590 | None:intergenic |
| TTCATTCAAGGAGGCCCTTT+TGG | 0.286601 | 4.4:-2836268 | MS.gene05932:CDS |
| GTTCTTGCAATGCCAGAAAA+TGG | 0.288824 | 4.4:-2836747 | MS.gene05932:CDS |
| CCTGAGATAATTTCTTCATT+TGG | 0.297730 | 4.4:-2835809 | MS.gene05932:CDS |
| CCATCCATGAAACTTATATA+TGG | 0.298685 | 4.4:+2836948 | None:intergenic |
| GTTCATGGCGTTGAGAGCTT+TGG | 0.301149 | 4.4:+2838589 | None:intergenic |
| TTCTTCAGCCATTGAAGAAA+TGG | 0.307356 | 4.4:+2838667 | None:intergenic |
| ACCAGAACACATTTGACATT+TGG | 0.311682 | 4.4:+2838173 | None:intergenic |
| GATGGAATAACAATGGGTTT+TGG | 0.315013 | 4.4:-2836930 | MS.gene05932:CDS |
| CTGACTGCAGGTGCTTATCT+TGG | 0.324350 | 4.4:-2836375 | MS.gene05932:intron |
| AATGCAGGTATGGATATTAA+AGG | 0.328338 | 4.4:-2837945 | MS.gene05932:intron |
| CTGCGACATGATTTCGTAGA+AGG | 0.333713 | 4.4:-2835298 | MS.gene05932:CDS |
| AACCTTGATGGTTTCCACTT+TGG | 0.340812 | 4.4:+2834419 | None:intergenic |
| CCAGAACACATTTGACATTT+GGG | 0.350947 | 4.4:+2838174 | None:intergenic |
| CTCGCCCACCTCTGCTCCTA+AGG | 0.358294 | 4.4:+2834355 | None:intergenic |
| TTTCCGACCCATTTCTTCAA+TGG | 0.359939 | 4.4:-2838675 | MS.gene05932:CDS |
| TCAACTTCCTCCAACCTTGA+TGG | 0.368546 | 4.4:+2834407 | None:intergenic |
| AGTACTTGTTTGTCAAGAAA+AGG | 0.372402 | 4.4:+2835520 | None:intergenic |
| TTTAACTGTGCCTCACTGTC+CGG | 0.378341 | 4.4:+2835842 | None:intergenic |
| ATATGAGCAAATCCTACATC+TGG | 0.391243 | 4.4:+2836711 | None:intergenic |
| CTATTGGTTATTTAGTTCTC+AGG | 0.393990 | 4.4:-2835912 | MS.gene05932:intron |
| GAAACCATATATAAGTTTCA+TGG | 0.401334 | 4.4:-2836952 | MS.gene05932:CDS |
| TATGTGCCATCGGGAAAGTT+AGG | 0.405875 | 4.4:-2836291 | MS.gene05932:CDS |
| ATGCAGGTATGGATATTAAA+GGG | 0.406021 | 4.4:-2837944 | MS.gene05932:intron |
| GCAATGCCAGAAAATGGAAT+TGG | 0.413015 | 4.4:-2836741 | MS.gene05932:CDS |
| CATACAAGTTTGTTGCCAAA+AGG | 0.414169 | 4.4:+2836253 | None:intergenic |
| TAAAAGTTATCTTGATGAAT+GGG | 0.417765 | 4.4:-2838204 | MS.gene05932:CDS |
| GGCAACACCGTTAGAATTAA+CGG | 0.431120 | 4.4:+2838631 | None:intergenic |
| CCCAAATGTCAAATGTGTTC+TGG | 0.432136 | 4.4:-2838174 | MS.gene05932:CDS |
| GAGATAATTTCTTCATTTGG+AGG | 0.438462 | 4.4:-2835806 | MS.gene05932:CDS |
| ATAAAAGTTATCTTGATGAA+TGG | 0.449490 | 4.4:-2838205 | MS.gene05932:CDS |
| TCTATTTCTAGTTGCTGAGT+GGG | 0.450844 | 4.4:-2835586 | MS.gene05932:intron |
| AAATAAGAAACCTAGGTTCA+TGG | 0.454268 | 4.4:+2838574 | None:intergenic |
| AGTATTAGTGGATAAAGATC+AGG | 0.459616 | 4.4:-2835266 | MS.gene05932:intron |
| CAGTCGAGCACTGACTCTAA+TGG | 0.460203 | 4.4:-2835740 | MS.gene05932:intron |
| CCAACATATATTGCATCTGC+TGG | 0.461407 | 4.4:+2836327 | None:intergenic |
| TTCATGGATGGAATAACAAT+GGG | 0.461776 | 4.4:-2836936 | MS.gene05932:CDS |
| GTACTTGTTTGTCAAGAAAA+GGG | 0.464988 | 4.4:+2835521 | None:intergenic |
| AAGCACACCTTTAGTGCAAA+AGG | 0.469186 | 4.4:-2837895 | MS.gene05932:intron |
| GGAATTGGCTTATCTGGTCA+TGG | 0.469307 | 4.4:-2836909 | MS.gene05932:CDS |
| GGTGCTTATCTTGGATTGAC+TGG | 0.469940 | 4.4:-2836366 | MS.gene05932:CDS |
| GATGCAATATATGTTGGCTT+AGG | 0.477695 | 4.4:-2836321 | MS.gene05932:CDS |
| TAGTTCTCAGGATCCCCATC+AGG | 0.480036 | 4.4:-2835900 | MS.gene05932:CDS |
| TCTTCAGCCATTGAAGAAAT+GGG | 0.483584 | 4.4:+2838668 | None:intergenic |
| AAGACGGCTTCAACCTCACT+TGG | 0.485673 | 4.4:+2834383 | None:intergenic |
| TTACCAACAGCTCCTTCTCC+TGG | 0.486422 | 4.4:+2836675 | None:intergenic |
| GCTCTCCAAGGCCTTGCAAA+AGG | 0.490434 | 4.4:-2835555 | MS.gene05932:CDS |
| TTAACTGTGCCTCACTGTCC+GGG | 0.494046 | 4.4:+2835843 | None:intergenic |
| CCAAATGAAGAAATTATCTC+AGG | 0.496539 | 4.4:+2835809 | None:intergenic |
| ATACAAGTTTGTTGCCAAAA+GGG | 0.500776 | 4.4:+2836254 | None:intergenic |
| TGGGGCGATCGAGGGTGAGA+AGG | 0.503187 | 4.4:+2838609 | None:intergenic |
| ATCATACATACCGGCACAAA+AGG | 0.503920 | 4.4:+2838130 | None:intergenic |
| CATATAGCGGCTCAAAGTCC+AGG | 0.508132 | 4.4:-2836693 | MS.gene05932:CDS |
| TCTTGGATTGACTGGAAAGA+GGG | 0.508317 | 4.4:-2836358 | MS.gene05932:CDS |
| GGGAAAGTTAGGTTCATTCA+AGG | 0.518997 | 4.4:-2836280 | MS.gene05932:CDS |
| AAAGTACTTTGATGTCCTGA+TGG | 0.520744 | 4.4:+2835885 | None:intergenic |
| TCTGCCGTTGCCTCTGCACT+AGG | 0.522855 | 4.4:-2835495 | MS.gene05932:CDS |
| ATTGGCTTGTTCCCAGATGT+AGG | 0.524294 | 4.4:-2836723 | MS.gene05932:CDS |
| AGGTGTCCGAGCAGTATTAG+TGG | 0.524429 | 4.4:-2835278 | MS.gene05932:CDS |
| CATTAGAGTCAGTGCTCGAC+TGG | 0.527781 | 4.4:+2835741 | None:intergenic |
| TTTCATGGATGGAATAACAA+TGG | 0.527960 | 4.4:-2836937 | MS.gene05932:CDS |
| ATCTTGGATTGACTGGAAAG+AGG | 0.530642 | 4.4:-2836359 | MS.gene05932:CDS |
| TTCTATTTCTAGTTGCTGAG+TGG | 0.533730 | 4.4:-2835587 | MS.gene05932:intron |
| TGAGAGCTTTGGGGCGATCG+AGG | 0.541267 | 4.4:+2838600 | None:intergenic |
| AAGTACTTTGATGTCCTGAT+GGG | 0.541762 | 4.4:+2835886 | None:intergenic |
| ATGGGTCGGAAAGAGAAGAA+AGG | 0.541911 | 4.4:+2838686 | None:intergenic |
| CCAGCAGATGCAATATATGT+TGG | 0.544693 | 4.4:-2836327 | MS.gene05932:CDS |
| GTGGAAACCATCAAGGTTGG+AGG | 0.546371 | 4.4:-2834414 | MS.gene05932:CDS |
| GGGGCGATCGAGGGTGAGAA+GGG | 0.549823 | 4.4:+2838610 | None:intergenic |
| AAAGTGGAAACCATCAAGGT+TGG | 0.553124 | 4.4:-2834417 | MS.gene05932:CDS |
| GAAGCCGTCTTTAAACCCTT+AGG | 0.555410 | 4.4:-2834371 | MS.gene05932:CDS |
| GAGAGCTTTGGGGCGATCGA+GGG | 0.558416 | 4.4:+2838601 | None:intergenic |
| CCTTTCCATCGAAAATTACA+CGG | 0.558704 | 4.4:+2834328 | None:intergenic |
| GGAACACACTATGTGCCATC+GGG | 0.563387 | 4.4:-2836300 | MS.gene05932:CDS |
| ACCCAAAGTGGAAACCATCA+AGG | 0.563693 | 4.4:-2834421 | MS.gene05932:CDS |
| GTTTGTCAAGAAAAGGGAGA+AGG | 0.565056 | 4.4:+2835527 | None:intergenic |
| CCATATATAAGTTTCATGGA+TGG | 0.569201 | 4.4:-2836948 | MS.gene05932:CDS |
| TGCTCCTAAGGGTTTAAAGA+CGG | 0.569607 | 4.4:+2834367 | None:intergenic |
| TTTGCCTAGTGCAGAGGCAA+CGG | 0.570032 | 4.4:+2835491 | None:intergenic |
| TAAACCCTTAGGAGCAGAGG+TGG | 0.570655 | 4.4:-2834360 | MS.gene05932:CDS |
| GCTCTCAACGCCATGAACCT+AGG | 0.579390 | 4.4:-2838584 | MS.gene05932:intron |
| TTTGCATATCAAAGAATACT+CGG | 0.580158 | 4.4:+2836989 | None:intergenic |
| AGGAACACACTATGTGCCAT+CGG | 0.580813 | 4.4:-2836301 | MS.gene05932:CDS |
| CTTTATCCACTAATACTGCT+CGG | 0.582905 | 4.4:+2835272 | None:intergenic |
| TCGCCCACCTCTGCTCCTAA+GGG | 0.584657 | 4.4:+2834356 | None:intergenic |
| TCATGGCGTTGAGAGCTTTG+GGG | 0.585204 | 4.4:+2838591 | None:intergenic |
| AGTCCAGGAGAAGGAGCTGT+TGG | 0.585383 | 4.4:-2836678 | MS.gene05932:intron |
| ATGTCGCAGCGAAGACCTCA+AGG | 0.588206 | 4.4:+2835312 | None:intergenic |
| ATTCACTGCAGAACCCAAAG+TGG | 0.590706 | 4.4:-2834433 | MS.gene05932:intron |
| GCGGCTCAAAGTCCAGGAGA+AGG | 0.592993 | 4.4:-2836687 | MS.gene05932:CDS |
| TATGAGCAAATCCTACATCT+GGG | 0.594751 | 4.4:+2836712 | None:intergenic |
| TTTGTCAAGAAAAGGGAGAA+GGG | 0.596278 | 4.4:+2835528 | None:intergenic |
| CTGAGTATCGCATTGCCTTG+AGG | 0.604394 | 4.4:-2835327 | MS.gene05932:CDS |
| CTTTAAACCCTTAGGAGCAG+AGG | 0.606217 | 4.4:-2834363 | MS.gene05932:CDS |
| AATGAACCTAACTTTCCCGA+TGG | 0.624467 | 4.4:+2836285 | None:intergenic |
| CAGCCATTGAAGAAATGGGT+CGG | 0.624981 | 4.4:+2838672 | None:intergenic |
| ATGGCTGAAGAATTCGTCAA+AGG | 0.630406 | 4.4:-2838656 | MS.gene05932:CDS |
| TGGGCTGATGAAGCTCTCCA+AGG | 0.631128 | 4.4:-2835567 | MS.gene05932:CDS |
| AGCAAGATATGAGTCAAACC+CGG | 0.631831 | 4.4:-2835861 | MS.gene05932:CDS |
| AAAGGCACCGTTAATTCTAA+CGG | 0.635338 | 4.4:-2838638 | MS.gene05932:CDS |
| TGCAGGTATGGATATTAAAG+GGG | 0.636890 | 4.4:-2837943 | MS.gene05932:intron |
| GGTTGTTGCTGAAATACAGA+AGG | 0.644020 | 4.4:-2837922 | MS.gene05932:CDS |
| CTTTCCATCGAAAATTACAC+GGG | 0.647825 | 4.4:+2834329 | None:intergenic |
| AAACGACTGTGAATTATCCA+CGG | 0.650353 | 4.4:-2835469 | MS.gene05932:intron |
| GGAGGAAGTTGATCCAAGTG+AGG | 0.659499 | 4.4:-2834396 | MS.gene05932:CDS |
| TGTAGGATTTGCTCATATAG+CGG | 0.671989 | 4.4:-2836706 | MS.gene05932:CDS |
| AAACCCTTAGGAGCAGAGGT+GGG | 0.675531 | 4.4:-2834359 | MS.gene05932:CDS |
| AGTACTTTGATGTCCTGATG+GGG | 0.677245 | 4.4:+2835887 | None:intergenic |
| AAAGTTAGGTTCATTCAAGG+AGG | 0.694937 | 4.4:-2836277 | MS.gene05932:CDS |
| CCGCTATCGTATCATAACAG+AGG | 0.696061 | 4.4:-2836886 | MS.gene05932:intron |
| TGAGTCAAACCCGGACAGTG+AGG | 0.708212 | 4.4:-2835852 | MS.gene05932:CDS |
| ATCTGTTATTGAAATCATCG+AGG | 0.717212 | 4.4:-2835777 | MS.gene05932:CDS |
| CCTCTGTTATGATACGATAG+CGG | 0.726952 | 4.4:+2836886 | None:intergenic |
| ATACCGGCACAAAAGGCACG+AGG | 0.754700 | 4.4:+2838137 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAAAAAATATGTAAAATT+TGG | - | chr4.4:2834665-2834684 | MS.gene05932:intron | 10.0% |
| !!! | TTTATTCATATTTTAATGAA+AGG | - | chr4.4:2834694-2834713 | MS.gene05932:intron | 10.0% |
| !! | AATTACAAATGTAATCTAAT+AGG | + | chr4.4:2835929-2835948 | None:intergenic | 15.0% |
| !! | ATTAGATTACATTTGTAATT+TGG | - | chr4.4:2835929-2835948 | MS.gene05932:intron | 15.0% |
| !! | TTGTTTGAACTTATTTATAT+TGG | - | chr4.4:2838193-2838212 | MS.gene05932:CDS | 15.0% |
| !!! | ATTGATAAATTTTACTTTTG+CGG | - | chr4.4:2837995-2838014 | MS.gene05932:intron | 15.0% |
| !!! | CTTCAATGTTTTAAAATAAT+TGG | - | chr4.4:2835665-2835684 | MS.gene05932:intron | 15.0% |
| !!! | GAATTTTTAGTTAATTATGT+AGG | - | chr4.4:2834791-2834810 | MS.gene05932:intron | 15.0% |
| !! | AATCTATCAACAACAAAAAA+AGG | + | chr4.4:2838513-2838532 | None:intergenic | 20.0% |
| !! | ACAAAAAAGATGTAACTAAA+GGG | + | chr4.4:2835863-2835882 | None:intergenic | 20.0% |
| !! | ATAAAAGTTATCTTGATGAA+TGG | - | chr4.4:2834908-2834927 | MS.gene05932:intron | 20.0% |
| !! | CTTAACTTAAGAAGTTTAAA+GGG | + | chr4.4:2836935-2836954 | None:intergenic | 20.0% |
| !! | GTTTATTCGATGATTTAATA+AGG | - | chr4.4:2836506-2836525 | MS.gene05932:intron | 20.0% |
| !! | TAAAAGTTATCTTGATGAAT+GGG | - | chr4.4:2834909-2834928 | MS.gene05932:intron | 20.0% |
| !! | TAAAATATTCAAACCGAATT+CGG | + | chr4.4:2836718-2836737 | None:intergenic | 20.0% |
| !! | TCTTAACTTAAGAAGTTTAA+AGG | + | chr4.4:2836936-2836955 | None:intergenic | 20.0% |
| !! | TTCTTAAGTTAAGATTGAAT+TGG | - | chr4.4:2836942-2836961 | MS.gene05932:CDS | 20.0% |
| !!! | AAAAATATGGTGATAATGAT+AGG | + | chr4.4:2837403-2837422 | None:intergenic | 20.0% |
| !!! | AAAAGGTATTCATTTTGAAT+TGG | + | chr4.4:2835576-2835595 | None:intergenic | 20.0% |
| !!! | CTTTTTTTTTTTTGAGCAAA+AGG | + | chr4.4:2838577-2838596 | None:intergenic | 20.0% |
| !!! | GTTATGTTTTGTTCAATATT+TGG | - | chr4.4:2838624-2838643 | MS.gene05932:CDS | 20.0% |
| !!! | TATGAGTATAAAAGCATAAA+CGG | + | chr4.4:2838070-2838089 | None:intergenic | 20.0% |
| !!! | TATTTCTGATTATTGTCATA+AGG | - | chr4.4:2834637-2834656 | MS.gene05932:intron | 20.0% |
| !!! | TTGGTAATAAACAGTTATTA+AGG | - | chr4.4:2835684-2835703 | MS.gene05932:intron | 20.0% |
| ! | AAAAAAAACCATGACACATA+TGG | + | chr4.4:2837048-2837067 | None:intergenic | 25.0% |
| ! | AACACTCATTAAATTCATGT+TGG | + | chr4.4:2837723-2837742 | None:intergenic | 25.0% |
| ! | ACTATTAAAACATCTAGATG+TGG | - | chr4.4:2836614-2836633 | MS.gene05932:intron | 25.0% |
| ! | ATCACCAAAAAAAAAGGAAA+AGG | + | chr4.4:2837680-2837699 | None:intergenic | 25.0% |
| ! | ATGAAAGGTTAAGAATTTGA+TGG | + | chr4.4:2835539-2835558 | None:intergenic | 25.0% |
| ! | ATTAAGCAACTATACTATAG+CGG | + | chr4.4:2836258-2836277 | None:intergenic | 25.0% |
| ! | ATTGAACAAAACATAACTGT+GGG | + | chr4.4:2838621-2838640 | None:intergenic | 25.0% |
| ! | CAAAAAAAGGATTTGTACAA+AGG | + | chr4.4:2838500-2838519 | None:intergenic | 25.0% |
| ! | GAAACCATATATAAGTTTCA+TGG | - | chr4.4:2836161-2836180 | MS.gene05932:intron | 25.0% |
| ! | GACAAAAAAGATGTAACTAA+AGG | + | chr4.4:2835864-2835883 | None:intergenic | 25.0% |
| ! | GCTAATAATATCTACACAAA+AGG | + | chr4.4:2835593-2835612 | None:intergenic | 25.0% |
| ! | TAAATTCATGTTGGAAAACA+TGG | + | chr4.4:2837714-2837733 | None:intergenic | 25.0% |
| ! | TATGAAAATAGTGCACAAAA+AGG | + | chr4.4:2836568-2836587 | None:intergenic | 25.0% |
| ! | TATTGAACAAAACATAACTG+TGG | + | chr4.4:2838622-2838641 | None:intergenic | 25.0% |
| ! | TGAATGTAAATAAGAAACCT+AGG | + | chr4.4:2834549-2834568 | None:intergenic | 25.0% |
| ! | TTCAGTGTAAGCAAAAAATA+TGG | + | chr4.4:2837416-2837435 | None:intergenic | 25.0% |
| ! | TTTGCATATCAAAGAATACT+CGG | + | chr4.4:2836127-2836146 | None:intergenic | 25.0% |
| !! | ATGAGTATAAAAGCATAAAC+GGG | + | chr4.4:2838069-2838088 | None:intergenic | 25.0% |
| !! | GCATGGTTTTTATAAATGAA+AGG | + | chr4.4:2835554-2835573 | None:intergenic | 25.0% |
| !! | TTTTATTAACACATTTCCAG+AGG | - | chr4.4:2836340-2836359 | MS.gene05932:CDS | 25.0% |
| !!! | AACAGCTTATTAGTTTTCAT+AGG | - | chr4.4:2836652-2836671 | MS.gene05932:intron | 25.0% |
| !!! | TTTTCATAGGTTTTGTTGAA+AGG | - | chr4.4:2836665-2836684 | MS.gene05932:intron | 25.0% |
| !!! | TTTTCCTTTTTTTTTGGTGA+TGG | - | chr4.4:2837679-2837698 | MS.gene05932:intron | 25.0% |
| !!! | TTTTGATTTGGAAATCTTTG+TGG | - | chr4.4:2834865-2834884 | MS.gene05932:intron | 25.0% |
| AAATAAGAAACCTAGGTTCA+TGG | + | chr4.4:2834542-2834561 | None:intergenic | 30.0% | |
| AACTTAAGAAGTTTAAAGGG+TGG | + | chr4.4:2836932-2836951 | None:intergenic | 30.0% | |
| AAGACTCAAGAGCAATTTAA+AGG | + | chr4.4:2836896-2836915 | None:intergenic | 30.0% | |
| AAGCATGTAAAAAATGCAAC+TGG | + | chr4.4:2835278-2835297 | None:intergenic | 30.0% | |
| AAGTTATCCTCAAAAGCTTA+TGG | + | chr4.4:2838284-2838303 | None:intergenic | 30.0% | |
| AATCTATCTGCATATATTGG+GGG | - | chr4.4:2838450-2838469 | MS.gene05932:intron | 30.0% | |
| AATGAGTGTTCTATCTGTAT+TGG | - | chr4.4:2837733-2837752 | MS.gene05932:intron | 30.0% | |
| AATGCAGGTATGGATATTAA+AGG | - | chr4.4:2835168-2835187 | MS.gene05932:intron | 30.0% | |
| ACATGCATGCAGAAAATTAT+TGG | - | chr4.4:2837955-2837974 | MS.gene05932:intron | 30.0% | |
| ACCAATCTATCTGCATATAT+TGG | - | chr4.4:2838447-2838466 | MS.gene05932:intron | 30.0% | |
| ACGATCTTACACAAAACTAT+TGG | - | chr4.4:2837185-2837204 | MS.gene05932:intron | 30.0% | |
| AGTACTTGTTTGTCAAGAAA+AGG | + | chr4.4:2837596-2837615 | None:intergenic | 30.0% | |
| ATCACCATCACCAAAAAAAA+AGG | + | chr4.4:2837686-2837705 | None:intergenic | 30.0% | |
| ATCTGTTATTGAAATCATCG+AGG | - | chr4.4:2837336-2837355 | MS.gene05932:intron | 30.0% | |
| ATGCAGGTATGGATATTAAA+GGG | - | chr4.4:2835169-2835188 | MS.gene05932:intron | 30.0% | |
| CAATCTATCTGCATATATTG+GGG | - | chr4.4:2838449-2838468 | MS.gene05932:intron | 30.0% | |
| CCAAATGAAGAAATTATCTC+AGG | + | chr4.4:2837307-2837326 | None:intergenic | 30.0% | |
| CCAATCTATCTGCATATATT+GGG | - | chr4.4:2838448-2838467 | MS.gene05932:intron | 30.0% | |
| CCATATATAAGTTTCATGGA+TGG | - | chr4.4:2836165-2836184 | MS.gene05932:intron | 30.0% | |
| CCATCCATGAAACTTATATA+TGG | + | chr4.4:2836168-2836187 | None:intergenic | 30.0% | |
| CCTAAAATATGCAGCATAAT+AGG | + | chr4.4:2836095-2836114 | None:intergenic | 30.0% | |
| CCTGAGATAATTTCTTCATT+TGG | - | chr4.4:2837304-2837323 | MS.gene05932:intron | 30.0% | |
| GAGATAATTTCTTCATTTGG+AGG | - | chr4.4:2837307-2837326 | MS.gene05932:intron | 30.0% | |
| GATGATTTAATAAGGACTGA+GGG | - | chr4.4:2836514-2836533 | MS.gene05932:intron | 30.0% | |
| GTACTTGTTTGTCAAGAAAA+GGG | + | chr4.4:2837595-2837614 | None:intergenic | 30.0% | |
| TATGACTCAATCATACATAC+CGG | + | chr4.4:2834995-2835014 | None:intergenic | 30.0% | |
| TTAAATATGCAACTCTTGCT+CGG | - | chr4.4:2835743-2835762 | MS.gene05932:CDS | 30.0% | |
| TTCATGGATGGAATAACAAT+GGG | - | chr4.4:2836177-2836196 | MS.gene05932:intron | 30.0% | |
| TTGCAGATGTTCTACTTATT+TGG | - | chr4.4:2835102-2835121 | MS.gene05932:intron | 30.0% | |
| TTTCATGGATGGAATAACAA+TGG | - | chr4.4:2836176-2836195 | MS.gene05932:intron | 30.0% | |
| ! | AGTATTAGTGGATAAAGATC+AGG | - | chr4.4:2837847-2837866 | MS.gene05932:intron | 30.0% |
| ! | CATATTTCCATAAGCTTTTG+AGG | - | chr4.4:2838274-2838293 | MS.gene05932:intron | 30.0% |
| ! | CCTATTATGCTGCATATTTT+AGG | - | chr4.4:2836092-2836111 | MS.gene05932:intron | 30.0% |
| ! | GGTTCCTTTTCCTTTTTTTT+TGG | - | chr4.4:2837673-2837692 | MS.gene05932:intron | 30.0% |
| ! | GTATTCATTTTGAATTGGCA+TGG | + | chr4.4:2835571-2835590 | None:intergenic | 30.0% |
| ! | TGAGTATAAAAGCATAAACG+GGG | + | chr4.4:2838068-2838087 | None:intergenic | 30.0% |
| ! | TTTTGCACAAGTTGTTAAAG+TGG | - | chr4.4:2836052-2836071 | MS.gene05932:intron | 30.0% |
| !! | AGAGAAGAAAGGTTTGATTT+TGG | + | chr4.4:2834419-2834438 | None:intergenic | 30.0% |
| !! | ATACAAGTTTGTTGCCAAAA+GGG | + | chr4.4:2836862-2836881 | None:intergenic | 30.0% |
| !! | CTATTGGTTATTTAGTTCTC+AGG | - | chr4.4:2837201-2837220 | MS.gene05932:intron | 30.0% |
| !! | TAGGTGTTGATTGTTTATCA+TGG | - | chr4.4:2834728-2834747 | MS.gene05932:intron | 30.0% |
| !! | TTGAATATTTTACTGACTGC+AGG | - | chr4.4:2836726-2836745 | MS.gene05932:CDS | 30.0% |
| !!! | ATAACAATGGGTTTTGGAAT+TGG | - | chr4.4:2836189-2836208 | MS.gene05932:intron | 30.0% |
| !!! | GCATTTTTTACATGCTTCAT+TGG | - | chr4.4:2835281-2835300 | MS.gene05932:CDS | 30.0% |
| !!! | TCTACTTATTTGGTTTTGAG+TGG | - | chr4.4:2835112-2835131 | MS.gene05932:intron | 30.0% |
| !!! | TTGTTGGCTTGATTTTGATT+TGG | - | chr4.4:2834853-2834872 | MS.gene05932:intron | 30.0% |
| AAAAGACATCATGCTGACAA+TGG | + | chr4.4:2835640-2835659 | None:intergenic | 35.0% | |
| AAACGACTGTGAATTATCCA+CGG | - | chr4.4:2837644-2837663 | MS.gene05932:intron | 35.0% | |
| AAAGTTAGGTTCATTCAAGG+AGG | - | chr4.4:2836836-2836855 | MS.gene05932:intron | 35.0% | |
| AAATCTTTGTGGTGCAGAAA+TGG | - | chr4.4:2834876-2834895 | MS.gene05932:intron | 35.0% | |
| AAGTACTTTGATGTCCTGAT+GGG | + | chr4.4:2837230-2837249 | None:intergenic | 35.0% | |
| AATTGCACCTATACTTGGTT+TGG | + | chr4.4:2837934-2837953 | None:intergenic | 35.0% | |
| ACCAGAACACATTTGACATT+TGG | + | chr4.4:2834943-2834962 | None:intergenic | 35.0% | |
| ATATGAGCAAATCCTACATC+TGG | + | chr4.4:2836405-2836424 | None:intergenic | 35.0% | |
| ATCGTATCATAACAGAGGTA+TGG | - | chr4.4:2836232-2836251 | MS.gene05932:intron | 35.0% | |
| ATGTCAATTGCACCTATACT+TGG | + | chr4.4:2837939-2837958 | None:intergenic | 35.0% | |
| ATTAATGGTCAATGCAGGTA+TGG | - | chr4.4:2835158-2835177 | MS.gene05932:intron | 35.0% | |
| CACAAAAAGGAGAAATGGAA+GGG | + | chr4.4:2836555-2836574 | None:intergenic | 35.0% | |
| CAGATGCAATTCAAAGGTTA+AGG | + | chr4.4:2835820-2835839 | None:intergenic | 35.0% | |
| CCAGAACACATTTGACATTT+GGG | + | chr4.4:2834942-2834961 | None:intergenic | 35.0% | |
| CCCAATATATGCAGATAGAT+TGG | + | chr4.4:2838451-2838470 | None:intergenic | 35.0% | |
| CGATGATTTAATAAGGACTG+AGG | - | chr4.4:2836513-2836532 | MS.gene05932:intron | 35.0% | |
| CTGCAGATAAACTAAGATCT+CGG | + | chr4.4:2835435-2835454 | None:intergenic | 35.0% | |
| CTTATATTACCGACACAATC+AGG | + | chr4.4:2836997-2837016 | None:intergenic | 35.0% | |
| CTTCAAGATAGTACAATTGG+TGG | - | chr4.4:2838020-2838039 | MS.gene05932:intron | 35.0% | |
| CTTTATCCACTAATACTGCT+CGG | + | chr4.4:2837844-2837863 | None:intergenic | 35.0% | |
| GAAAAGTTGCATAGCAAAGA+AGG | + | chr4.4:2835349-2835368 | None:intergenic | 35.0% | |
| GCACTTCAAGATAGTACAAT+TGG | - | chr4.4:2838017-2838036 | MS.gene05932:intron | 35.0% | |
| TAGTGCACAAAAAGGAGAAA+TGG | + | chr4.4:2836560-2836579 | None:intergenic | 35.0% | |
| TATGAGCAAATCCTACATCT+GGG | + | chr4.4:2836404-2836423 | None:intergenic | 35.0% | |
| TCATAATTGCCTTCTAAACC+AGG | - | chr4.4:2838085-2838104 | MS.gene05932:intron | 35.0% | |
| TCTTCAGCCATTGAAGAAAT+GGG | + | chr4.4:2834448-2834467 | None:intergenic | 35.0% | |
| TGCAGGTATGGATATTAAAG+GGG | - | chr4.4:2835170-2835189 | MS.gene05932:intron | 35.0% | |
| TGCATGCAGAAAATTATTGG+AGG | - | chr4.4:2837958-2837977 | MS.gene05932:intron | 35.0% | |
| TTAGAATGTACTTCCAGTTG+AGG | - | chr4.4:2835783-2835802 | MS.gene05932:CDS | 35.0% | |
| TTCTTCAGCCATTGAAGAAA+TGG | + | chr4.4:2834449-2834468 | None:intergenic | 35.0% | |
| TTTGTCAAGAAAAGGGAGAA+GGG | + | chr4.4:2837588-2837607 | None:intergenic | 35.0% | |
| ! | AAAGTACTTTGATGTCCTGA+TGG | + | chr4.4:2837231-2837250 | None:intergenic | 35.0% |
| ! | AACAAGCCAATTCCATTTTC+TGG | + | chr4.4:2836381-2836400 | None:intergenic | 35.0% |
| ! | AACATAACTGTGGGTTAAAG+AGG | + | chr4.4:2838612-2838631 | None:intergenic | 35.0% |
| ! | ATACCTGCATTGACCATTAA+TGG | + | chr4.4:2835159-2835178 | None:intergenic | 35.0% |
| ! | ATACTCAGTTTTCATTACGC+TGG | + | chr4.4:2837774-2837793 | None:intergenic | 35.0% |
| ! | ATGAAAGGATGATTCTAGCT+AGG | - | chr4.4:2834709-2834728 | MS.gene05932:intron | 35.0% |
| ! | ATTGAGACCTTTTGCACTAA+AGG | + | chr4.4:2835228-2835247 | None:intergenic | 35.0% |
| ! | CAGCTTAAAGTGAGTCTTTT+TGG | - | chr4.4:2838164-2838183 | MS.gene05932:CDS | 35.0% |
| ! | GTTTTTCCACTTACTTTCTG+TGG | - | chr4.4:2836687-2836706 | MS.gene05932:CDS | 35.0% |
| ! | TAGATTCTAAAGAGTTTGCC+TGG | + | chr4.4:2838106-2838125 | None:intergenic | 35.0% |
| ! | TGTAGGATTTGCTCATATAG+CGG | - | chr4.4:2836407-2836426 | MS.gene05932:intron | 35.0% |
| !! | AAAGGCACCGTTAATTCTAA+CGG | - | chr4.4:2834475-2834494 | MS.gene05932:intron | 35.0% |
| !! | CATACAAGTTTGTTGCCAAA+AGG | + | chr4.4:2836863-2836882 | None:intergenic | 35.0% |
| !! | GATGCAATATATGTTGGCTT+AGG | - | chr4.4:2836792-2836811 | MS.gene05932:intron | 35.0% |
| !! | GATGGAATAACAATGGGTTT+TGG | - | chr4.4:2836183-2836202 | MS.gene05932:intron | 35.0% |
| !! | TCTATTTCTAGTTGCTGAGT+GGG | - | chr4.4:2837527-2837546 | MS.gene05932:intron | 35.0% |
| !! | TTCTATTTCTAGTTGCTGAG+TGG | - | chr4.4:2837526-2837545 | MS.gene05932:intron | 35.0% |
| !!! | CTTATTTGGTTTTGAGTGGT+AGG | - | chr4.4:2835116-2835135 | MS.gene05932:intron | 35.0% |
| !!! | GTTTTGAGAGTCACCATTAA+TGG | - | chr4.4:2835143-2835162 | MS.gene05932:intron | 35.0% |
| AAAAGGAGAAATGGAAGGGT+TGG | + | chr4.4:2836551-2836570 | None:intergenic | 40.0% | |
| AAACATCTAGATGTGGTCTC+TGG | - | chr4.4:2836621-2836640 | MS.gene05932:intron | 40.0% | |
| AAAGTGGAAACCATCAAGGT+TGG | - | chr4.4:2838696-2838715 | MS.gene05932:CDS | 40.0% | |
| AAGAGTTTGCCTGGTTTAGA+AGG | + | chr4.4:2838097-2838116 | None:intergenic | 40.0% | |
| AAGCACACCTTTAGTGCAAA+AGG | - | chr4.4:2835218-2835237 | MS.gene05932:intron | 40.0% | |
| AATGAACCTAACTTTCCCGA+TGG | + | chr4.4:2836831-2836850 | None:intergenic | 40.0% | |
| AGACCTCAATCACATCTGAT+AGG | + | chr4.4:2835492-2835511 | None:intergenic | 40.0% | |
| AGAGACACTGAACTTCCTTA+TGG | - | chr4.4:2835888-2835907 | MS.gene05932:CDS | 40.0% | |
| AGCAAGATATGAGTCAAACC+CGG | - | chr4.4:2837252-2837271 | MS.gene05932:intron | 40.0% | |
| AGTACTTTGATGTCCTGATG+GGG | + | chr4.4:2837229-2837248 | None:intergenic | 40.0% | |
| ATAAGGAAGTTCAGTGTCTC+TGG | + | chr4.4:2835889-2835908 | None:intergenic | 40.0% | |
| ATCATACATACCGGCACAAA+AGG | + | chr4.4:2834986-2835005 | None:intergenic | 40.0% | |
| ATCTTGGATTGACTGGAAAG+AGG | - | chr4.4:2836754-2836773 | MS.gene05932:CDS | 40.0% | |
| ATGGCTGAAGAATTCGTCAA+AGG | - | chr4.4:2834457-2834476 | MS.gene05932:intron | 40.0% | |
| CAACCTATCAGATGTGATTG+AGG | - | chr4.4:2835486-2835505 | MS.gene05932:CDS | 40.0% | |
| CACACACAGAAACATCCATA+AGG | + | chr4.4:2835906-2835925 | None:intergenic | 40.0% | |
| CATCTGCTTCTCTCATTACA+GGG | - | chr4.4:2835834-2835853 | MS.gene05932:CDS | 40.0% | |
| CCAACATATATTGCATCTGC+TGG | + | chr4.4:2836789-2836808 | None:intergenic | 40.0% | |
| CCAGCAGATGCAATATATGT+TGG | - | chr4.4:2836786-2836805 | MS.gene05932:intron | 40.0% | |
| CCCAAATGTCAAATGTGTTC+TGG | - | chr4.4:2834939-2834958 | MS.gene05932:intron | 40.0% | |
| CCTCTGTTATGATACGATAG+CGG | + | chr4.4:2836230-2836249 | None:intergenic | 40.0% | |
| CGAGATCTTAGTTTATCTGC+AGG | - | chr4.4:2835433-2835452 | MS.gene05932:intron | 40.0% | |
| GAGAAGCAGATGCAATTCAA+AGG | + | chr4.4:2835826-2835845 | None:intergenic | 40.0% | |
| GAGATTCCACAGAAAGTAAG+TGG | + | chr4.4:2836696-2836715 | None:intergenic | 40.0% | |
| GATCTTAGTTTATCTGCAGG+CGG | - | chr4.4:2835436-2835455 | MS.gene05932:intron | 40.0% | |
| GCAATGCCAGAAAATGGAAT+TGG | - | chr4.4:2836372-2836391 | MS.gene05932:intron | 40.0% | |
| GCACAAAAAGGAGAAATGGA+AGG | + | chr4.4:2836556-2836575 | None:intergenic | 40.0% | |
| GGCAACACCGTTAGAATTAA+CGG | + | chr4.4:2834485-2834504 | None:intergenic | 40.0% | |
| GGGAAAGTTAGGTTCATTCA+AGG | - | chr4.4:2836833-2836852 | MS.gene05932:intron | 40.0% | |
| GGTTGTTGCTGAAATACAGA+AGG | - | chr4.4:2835191-2835210 | MS.gene05932:intron | 40.0% | |
| GTTCTTGCAATGCCAGAAAA+TGG | - | chr4.4:2836366-2836385 | MS.gene05932:CDS | 40.0% | |
| GTTTGTCAAGAAAAGGGAGA+AGG | + | chr4.4:2837589-2837608 | None:intergenic | 40.0% | |
| TCACCATTAATGGTCAATGC+AGG | - | chr4.4:2835153-2835172 | MS.gene05932:intron | 40.0% | |
| TCTTGGATTGACTGGAAAGA+GGG | - | chr4.4:2836755-2836774 | MS.gene05932:CDS | 40.0% | |
| TGCATTCACCATATGTGTCA+TGG | - | chr4.4:2837037-2837056 | MS.gene05932:intron | 40.0% | |
| TGCTCCTAAGGGTTTAAAGA+CGG | + | chr4.4:2838749-2838768 | None:intergenic | 40.0% | |
| TTCTGAACAAACTACGCTGA+TGG | + | chr4.4:2837115-2837134 | None:intergenic | 40.0% | |
| TTCTGTGGAATCTCCGAATT+CGG | - | chr4.4:2836702-2836721 | MS.gene05932:CDS | 40.0% | |
| TTGTTCGCCAAACCAAGTAT+AGG | - | chr4.4:2837924-2837943 | MS.gene05932:CDS | 40.0% | |
| TTTCCGACCCATTTCTTCAA+TGG | - | chr4.4:2834438-2834457 | MS.gene05932:intron | 40.0% | |
| ! | AACCTTGATGGTTTCCACTT+TGG | + | chr4.4:2838697-2838716 | None:intergenic | 40.0% |
| ! | ACCTTGATGGTTTCCACTTT+GGG | + | chr4.4:2838696-2838715 | None:intergenic | 40.0% |
| ! | ATACATTGGCCTGATTGTGT+CGG | - | chr4.4:2836985-2837004 | MS.gene05932:CDS | 40.0% |
| ! | GCAAAGAAGGATGATGATGA+TGG | + | chr4.4:2835336-2835355 | None:intergenic | 40.0% |
| ! | GCAGATAGATTGGTCATGTT+TGG | + | chr4.4:2838441-2838460 | None:intergenic | 40.0% |
| ! | TTCCAGTTGAGGTTCTAATG+AGG | - | chr4.4:2835794-2835813 | MS.gene05932:CDS | 40.0% |
| ! | TTTTCATTACGCTGGTAAGC+TGG | + | chr4.4:2837766-2837785 | None:intergenic | 40.0% |
| !!! | GGTTTTGGAATTGGCTTATC+TGG | - | chr4.4:2836198-2836217 | MS.gene05932:intron | 40.0% |
| !!! | TTGGTTTTGAGTGGTAGGTA+AGG | - | chr4.4:2835121-2835140 | MS.gene05932:intron | 40.0% |
| ACCCAAAGTGGAAACCATCA+AGG | - | chr4.4:2838692-2838711 | MS.gene05932:CDS | 45.0% | |
| AGGAACACACTATGTGCCAT+CGG | - | chr4.4:2836812-2836831 | MS.gene05932:intron | 45.0% | |
| ATGGGTCGGAAAGAGAAGAA+AGG | + | chr4.4:2834430-2834449 | None:intergenic | 45.0% | |
| ATTCACTGCAGAACCCAAAG+TGG | - | chr4.4:2838680-2838699 | MS.gene05932:CDS | 45.0% | |
| ATTCTCGATGACCGCTTACT+TGG | - | chr4.4:2835406-2835425 | MS.gene05932:intron | 45.0% | |
| CAGCCATTGAAGAAATGGGT+CGG | + | chr4.4:2834444-2834463 | None:intergenic | 45.0% | |
| CCGCTATCGTATCATAACAG+AGG | - | chr4.4:2836227-2836246 | MS.gene05932:intron | 45.0% | |
| CTGCGACATGATTTCGTAGA+AGG | - | chr4.4:2837815-2837834 | MS.gene05932:intron | 45.0% | |
| CTTTAAACCCTTAGGAGCAG+AGG | - | chr4.4:2838750-2838769 | MS.gene05932:CDS | 45.0% | |
| GAAGCCGTCTTTAAACCCTT+AGG | - | chr4.4:2838742-2838761 | MS.gene05932:CDS | 45.0% | |
| GATCTCGGTTACCAAGTAAG+CGG | + | chr4.4:2835420-2835439 | None:intergenic | 45.0% | |
| GCATCTGCTTCTCTCATTAC+AGG | - | chr4.4:2835833-2835852 | MS.gene05932:CDS | 45.0% | |
| GGTGCTTATCTTGGATTGAC+TGG | - | chr4.4:2836747-2836766 | MS.gene05932:CDS | 45.0% | |
| TATGTGCCATCGGGAAAGTT+AGG | - | chr4.4:2836822-2836841 | MS.gene05932:intron | 45.0% | |
| TCAACTTCCTCCAACCTTGA+TGG | + | chr4.4:2838709-2838728 | None:intergenic | 45.0% | |
| TTTAACTGTGCCTCACTGTC+CGG | + | chr4.4:2837274-2837293 | None:intergenic | 45.0% | |
| ! | CTGGAAGTACATTCTAACCC+AGG | + | chr4.4:2835780-2835799 | None:intergenic | 45.0% |
| ! | GGAATTGGCTTATCTGGTCA+TGG | - | chr4.4:2836204-2836223 | MS.gene05932:intron | 45.0% |
| ! | TGTGTGTGTGTGAGTGTTGT+TGG | - | chr4.4:2834837-2834856 | MS.gene05932:intron | 45.0% |
| ! | TTCATGGCGTTGAGAGCTTT+GGG | + | chr4.4:2834526-2834545 | None:intergenic | 45.0% |
| ! | TTCATTCAAGGAGGCCCTTT+TGG | - | chr4.4:2836845-2836864 | MS.gene05932:intron | 45.0% |
| !! | ACTCTTGCTCGGTGTTAGTT+TGG | - | chr4.4:2835754-2835773 | MS.gene05932:CDS | 45.0% |
| !! | ATTGGCTTGTTCCCAGATGT+AGG | - | chr4.4:2836390-2836409 | MS.gene05932:intron | 45.0% |
| !! | GAGCTCAAATGCTGGTTCTA+TGG | - | chr4.4:2838472-2838491 | MS.gene05932:intron | 45.0% |
| !! | GATGATGATGATGGCGAAAG+CGG | + | chr4.4:2835327-2835346 | None:intergenic | 45.0% |
| !! | AAAAAAAATATGTAAAATTT+GGG | - | chr4.4:2834666-2834685 | MS.gene05932:intron | 5.0% |
| !! | AAAATTATAATATAATACAT+TGG | - | chr4.4:2836971-2836990 | MS.gene05932:CDS | 5.0% |
| !!! | GTATTATATTATAATTTTAT+TGG | + | chr4.4:2836969-2836988 | None:intergenic | 5.0% |
| AAACCCTTAGGAGCAGAGGT+GGG | - | chr4.4:2838754-2838773 | MS.gene05932:CDS | 50.0% | |
| AAGACGGCTTCAACCTCACT+TGG | + | chr4.4:2838733-2838752 | None:intergenic | 50.0% | |
| AGGAAGTTCAGTGTCTCTGG+AGG | + | chr4.4:2835886-2835905 | None:intergenic | 50.0% | |
| AGGTGTCCGAGCAGTATTAG+TGG | - | chr4.4:2837835-2837854 | MS.gene05932:intron | 50.0% | |
| CATATAGCGGCTCAAAGTCC+AGG | - | chr4.4:2836420-2836439 | MS.gene05932:intron | 50.0% | |
| CATTAGAGTCAGTGCTCGAC+TGG | + | chr4.4:2837375-2837394 | None:intergenic | 50.0% | |
| CTGACTGCAGGTGCTTATCT+TGG | - | chr4.4:2836738-2836757 | MS.gene05932:CDS | 50.0% | |
| GCATTGCAAGAACAGTCCTC+TGG | + | chr4.4:2836359-2836378 | None:intergenic | 50.0% | |
| GGAACACACTATGTGCCATC+GGG | - | chr4.4:2836813-2836832 | MS.gene05932:intron | 50.0% | |
| GGCCTCATTAGAACCTCAAC+TGG | + | chr4.4:2835799-2835818 | None:intergenic | 50.0% | |
| GTGAATTATCCACGGTGAGC+AGG | - | chr4.4:2837652-2837671 | MS.gene05932:intron | 50.0% | |
| GTGGAAACCATCAAGGTTGG+AGG | - | chr4.4:2838699-2838718 | MS.gene05932:CDS | 50.0% | |
| TAAACCCTTAGGAGCAGAGG+TGG | - | chr4.4:2838753-2838772 | MS.gene05932:CDS | 50.0% | |
| TAGTTCTCAGGATCCCCATC+AGG | - | chr4.4:2837213-2837232 | MS.gene05932:intron | 50.0% | |
| TATTGGGGGAGCTCAAATGC+TGG | - | chr4.4:2838464-2838483 | MS.gene05932:intron | 50.0% | |
| TTAACTGTGCCTCACTGTCC+GGG | + | chr4.4:2837273-2837292 | None:intergenic | 50.0% | |
| TTACCAACAGCTCCTTCTCC+TGG | + | chr4.4:2836441-2836460 | None:intergenic | 50.0% | |
| TTTGCCTAGTGCAGAGGCAA+CGG | + | chr4.4:2837625-2837644 | None:intergenic | 50.0% | |
| ! | CTGAGTATCGCATTGCCTTG+AGG | - | chr4.4:2837786-2837805 | MS.gene05932:intron | 50.0% |
| ! | GGAGGAAGTTGATCCAAGTG+AGG | - | chr4.4:2838717-2838736 | MS.gene05932:CDS | 50.0% |
| ! | GTTCATGGCGTTGAGAGCTT+TGG | + | chr4.4:2834527-2834546 | None:intergenic | 50.0% |
| ! | TCATGGCGTTGAGAGCTTTG+GGG | + | chr4.4:2834525-2834544 | None:intergenic | 50.0% |
| !! | CAGTCGAGCACTGACTCTAA+TGG | - | chr4.4:2837373-2837392 | MS.gene05932:intron | 50.0% |
| !!! | AGAAGGGAGCACCTTTTGCA+AGG | + | chr4.4:2837572-2837591 | None:intergenic | 50.0% |
| !!! | GTCGTTTTTGCCTAGTGCAG+AGG | + | chr4.4:2837631-2837650 | None:intergenic | 50.0% |
| AGTCCAGGAGAAGGAGCTGT+TGG | - | chr4.4:2836435-2836454 | MS.gene05932:intron | 55.0% | |
| ATGTCGCAGCGAAGACCTCA+AGG | + | chr4.4:2837804-2837823 | None:intergenic | 55.0% | |
| GAAAAGGAACCTGCTCACCG+TGG | + | chr4.4:2837664-2837683 | None:intergenic | 55.0% | |
| GCTCTCAACGCCATGAACCT+AGG | - | chr4.4:2834529-2834548 | MS.gene05932:intron | 55.0% | |
| GCTCTCCAAGGCCTTGCAAA+AGG | - | chr4.4:2837558-2837577 | MS.gene05932:intron | 55.0% | |
| TGAGTCAAACCCGGACAGTG+AGG | - | chr4.4:2837261-2837280 | MS.gene05932:intron | 55.0% | |
| TGGGCTGATGAAGCTCTCCA+AGG | - | chr4.4:2837546-2837565 | MS.gene05932:intron | 55.0% | |
| ! | ATACCGGCACAAAAGGCACG+AGG | + | chr4.4:2834979-2834998 | None:intergenic | 55.0% |
| ! | GAGCACCTTTTGCAAGGCCT+TGG | + | chr4.4:2837566-2837585 | None:intergenic | 55.0% |
| ! | TCTCCTCGTGCCTTTTGTGC+CGG | - | chr4.4:2834973-2834992 | MS.gene05932:intron | 55.0% |
| !! | GCTCGGTGTTAGTTTGGCCT+GGG | - | chr4.4:2835760-2835779 | MS.gene05932:CDS | 55.0% |
| !! | TGCTCGGTGTTAGTTTGGCC+TGG | - | chr4.4:2835759-2835778 | MS.gene05932:CDS | 55.0% |
| GCGGCTCAAAGTCCAGGAGA+AGG | - | chr4.4:2836426-2836445 | MS.gene05932:intron | 60.0% | |
| TCGCCCACCTCTGCTCCTAA+GGG | + | chr4.4:2838760-2838779 | None:intergenic | 60.0% | |
| TCTGCCGTTGCCTCTGCACT+AGG | - | chr4.4:2837618-2837637 | MS.gene05932:intron | 60.0% | |
| !! | GAGAGCTTTGGGGCGATCGA+GGG | + | chr4.4:2834515-2834534 | None:intergenic | 60.0% |
| !! | TGAGAGCTTTGGGGCGATCG+AGG | + | chr4.4:2834516-2834535 | None:intergenic | 60.0% |
| CTCGCCCACCTCTGCTCCTA+AGG | + | chr4.4:2838761-2838780 | None:intergenic | 65.0% | |
| GGGGCGATCGAGGGTGAGAA+GGG | + | chr4.4:2834506-2834525 | None:intergenic | 65.0% | |
| TGGGGCGATCGAGGGTGAGA+AGG | + | chr4.4:2834507-2834526 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 2834343 | 2838792 | 2834343 | ID=MS.gene05932 |
| chr4.4 | mRNA | 2834343 | 2838792 | 2834343 | ID=MS.gene05932.t1;Parent=MS.gene05932 |
| chr4.4 | exon | 2838585 | 2838792 | 2838585 | ID=MS.gene05932.t1.exon1;Parent=MS.gene05932.t1 |
| chr4.4 | CDS | 2838585 | 2838792 | 2838585 | ID=cds.MS.gene05932.t1;Parent=MS.gene05932.t1 |
| chr4.4 | exon | 2838141 | 2838242 | 2838141 | ID=MS.gene05932.t1.exon2;Parent=MS.gene05932.t1 |
| chr4.4 | CDS | 2838141 | 2838242 | 2838141 | ID=cds.MS.gene05932.t1;Parent=MS.gene05932.t1 |
| chr4.4 | exon | 2837896 | 2837960 | 2837896 | ID=MS.gene05932.t1.exon3;Parent=MS.gene05932.t1 |
| chr4.4 | CDS | 2837896 | 2837960 | 2837896 | ID=cds.MS.gene05932.t1;Parent=MS.gene05932.t1 |
| chr4.4 | exon | 2836887 | 2837021 | 2836887 | ID=MS.gene05932.t1.exon4;Parent=MS.gene05932.t1 |
| chr4.4 | CDS | 2836887 | 2837021 | 2836887 | ID=cds.MS.gene05932.t1;Parent=MS.gene05932.t1 |
| chr4.4 | exon | 2836679 | 2836775 | 2836679 | ID=MS.gene05932.t1.exon5;Parent=MS.gene05932.t1 |
| chr4.4 | CDS | 2836679 | 2836775 | 2836679 | ID=cds.MS.gene05932.t1;Parent=MS.gene05932.t1 |
| chr4.4 | exon | 2836258 | 2836387 | 2836258 | ID=MS.gene05932.t1.exon6;Parent=MS.gene05932.t1 |
| chr4.4 | CDS | 2836258 | 2836387 | 2836258 | ID=cds.MS.gene05932.t1;Parent=MS.gene05932.t1 |
| chr4.4 | exon | 2835741 | 2835919 | 2835741 | ID=MS.gene05932.t1.exon7;Parent=MS.gene05932.t1 |
| chr4.4 | CDS | 2835741 | 2835919 | 2835741 | ID=cds.MS.gene05932.t1;Parent=MS.gene05932.t1 |
| chr4.4 | exon | 2835470 | 2835597 | 2835470 | ID=MS.gene05932.t1.exon8;Parent=MS.gene05932.t1 |
| chr4.4 | CDS | 2835470 | 2835597 | 2835470 | ID=cds.MS.gene05932.t1;Parent=MS.gene05932.t1 |
| chr4.4 | exon | 2835267 | 2835368 | 2835267 | ID=MS.gene05932.t1.exon9;Parent=MS.gene05932.t1 |
| chr4.4 | CDS | 2835267 | 2835368 | 2835267 | ID=cds.MS.gene05932.t1;Parent=MS.gene05932.t1 |
| chr4.4 | exon | 2834343 | 2834444 | 2834343 | ID=MS.gene05932.t1.exon10;Parent=MS.gene05932.t1 |
| chr4.4 | CDS | 2834343 | 2834444 | 2834343 | ID=cds.MS.gene05932.t1;Parent=MS.gene05932.t1 |
| Gene Sequence |
| Protein sequence |
