Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04775.t1 | XP_003630825.2 | 97.9 | 377 | 8 | 0 | 1 | 377 | 42 | 418 | 5.80E-207 | 729.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04775.t1 | Q9T0K7 | 74.1 | 375 | 97 | 0 | 3 | 377 | 47 | 421 | 9.2e-161 | 567.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04775.t1 | G7L900 | 97.9 | 377 | 8 | 0 | 1 | 377 | 1 | 377 | 4.2e-207 | 729.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene69510 | MS.gene04775 | PPI |
| MS.gene47956 | MS.gene04775 | PPI |
| MS.gene000261 | MS.gene04775 | PPI |
| MS.gene022768 | MS.gene04775 | PPI |
| MS.gene04775 | MS.gene022542 | PPI |
| MS.gene04775 | MS.gene030881 | PPI |
| MS.gene022542 | MS.gene04775 | PPI |
| MS.gene04775 | MS.gene62781 | PPI |
| MS.gene33113 | MS.gene04775 | PPI |
| MS.gene39279 | MS.gene04775 | PPI |
| MS.gene04775 | MS.gene049135 | PPI |
| MS.gene04775 | MS.gene058907 | PPI |
| MS.gene016092 | MS.gene04775 | PPI |
| MS.gene61573 | MS.gene04775 | PPI |
| MS.gene020199 | MS.gene04775 | PPI |
| MS.gene59431 | MS.gene04775 | PPI |
| MS.gene04775 | MS.gene015737 | PPI |
| MS.gene27992 | MS.gene04775 | PPI |
| MS.gene015737 | MS.gene04775 | PPI |
| MS.gene019194 | MS.gene04775 | PPI |
| MS.gene010581 | MS.gene04775 | PPI |
| MS.gene058482 | MS.gene04775 | PPI |
| MS.gene051489 | MS.gene04775 | PPI |
| MS.gene64726 | MS.gene04775 | PPI |
| MS.gene05932 | MS.gene04775 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04775.t1 | MTR_8g103840 | 97.878 | 377 | 8 | 0 | 1 | 377 | 1 | 377 | 0.0 | 758 |
| MS.gene04775.t1 | MTR_8g103840 | 93.103 | 377 | 22 | 2 | 1 | 377 | 42 | 414 | 0.0 | 715 |
| MS.gene04775.t1 | MTR_8g103840 | 98.403 | 313 | 5 | 0 | 65 | 377 | 4 | 316 | 0.0 | 630 |
| MS.gene04775.t1 | MTR_8g103840 | 97.611 | 293 | 7 | 0 | 85 | 377 | 8 | 300 | 0.0 | 586 |
| MS.gene04775.t1 | MTR_8g103840 | 98.134 | 268 | 5 | 0 | 110 | 377 | 1 | 268 | 0.0 | 538 |
| MS.gene04775.t1 | MTR_8g010580 | 35.754 | 358 | 208 | 10 | 17 | 371 | 22 | 360 | 1.06e-53 | 182 |
| MS.gene04775.t1 | MTR_3g046330 | 30.663 | 362 | 225 | 11 | 15 | 372 | 21 | 360 | 1.33e-48 | 169 |
| MS.gene04775.t1 | MTR_8g005990 | 33.151 | 365 | 217 | 12 | 10 | 368 | 40 | 383 | 6.60e-48 | 167 |
| MS.gene04775.t1 | MTR_1g014040 | 31.356 | 354 | 215 | 12 | 20 | 367 | 58 | 389 | 3.47e-45 | 160 |
| MS.gene04775.t1 | MTR_8g010580 | 34.524 | 336 | 198 | 10 | 17 | 349 | 22 | 338 | 3.50e-45 | 159 |
| MS.gene04775.t1 | MTR_8g005990 | 32.055 | 365 | 198 | 12 | 10 | 368 | 40 | 360 | 4.52e-41 | 149 |
| MS.gene04775.t1 | MTR_8g010580 | 35.055 | 271 | 166 | 7 | 17 | 287 | 22 | 282 | 2.88e-37 | 137 |
| MS.gene04775.t1 | MTR_4g100350 | 25.105 | 239 | 158 | 7 | 2 | 233 | 38 | 262 | 9.37e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04775.t1 | AT4G13360 | 74.133 | 375 | 97 | 0 | 3 | 377 | 47 | 421 | 0.0 | 587 |
| MS.gene04775.t1 | AT3G24360 | 71.011 | 376 | 109 | 0 | 2 | 377 | 43 | 418 | 0.0 | 570 |
| MS.gene04775.t1 | AT3G24360 | 67.287 | 376 | 119 | 2 | 2 | 377 | 43 | 414 | 0.0 | 538 |
| MS.gene04775.t1 | AT3G24360 | 70.288 | 313 | 93 | 0 | 65 | 377 | 4 | 316 | 1.41e-166 | 468 |
| MS.gene04775.t1 | AT3G24360 | 69.153 | 295 | 90 | 1 | 83 | 377 | 21 | 314 | 1.13e-153 | 436 |
| MS.gene04775.t1 | AT3G24360 | 69.072 | 291 | 90 | 0 | 87 | 377 | 3 | 293 | 4.88e-153 | 433 |
| MS.gene04775.t1 | AT3G24360 | 72.180 | 266 | 74 | 0 | 2 | 267 | 43 | 308 | 1.48e-145 | 416 |
| MS.gene04775.t1 | AT5G65940 | 36.740 | 362 | 207 | 9 | 13 | 371 | 17 | 359 | 9.17e-66 | 213 |
| MS.gene04775.t1 | AT5G65940 | 36.740 | 362 | 207 | 9 | 13 | 371 | 17 | 359 | 9.17e-66 | 213 |
| MS.gene04775.t1 | AT2G30660 | 35.112 | 356 | 209 | 9 | 13 | 365 | 13 | 349 | 4.48e-62 | 204 |
| MS.gene04775.t1 | AT2G30650 | 34.699 | 366 | 213 | 9 | 13 | 373 | 13 | 357 | 1.90e-58 | 194 |
| MS.gene04775.t1 | AT5G65940 | 36.607 | 336 | 191 | 9 | 15 | 347 | 19 | 335 | 2.46e-58 | 193 |
| MS.gene04775.t1 | AT2G30660 | 35.077 | 325 | 189 | 9 | 44 | 365 | 12 | 317 | 1.68e-55 | 186 |
| MS.gene04775.t1 | AT1G06550 | 32.394 | 355 | 216 | 11 | 15 | 366 | 21 | 354 | 1.38e-49 | 171 |
| MS.gene04775.t1 | AT5G65940 | 34.451 | 328 | 193 | 9 | 13 | 337 | 17 | 325 | 2.93e-49 | 169 |
| MS.gene04775.t1 | AT4G31810 | 33.144 | 353 | 210 | 11 | 20 | 367 | 56 | 387 | 1.62e-48 | 169 |
| MS.gene04775.t1 | AT3G60510 | 32.295 | 353 | 215 | 10 | 20 | 368 | 52 | 384 | 1.97e-41 | 150 |
| MS.gene04775.t1 | AT2G30650 | 32.121 | 330 | 198 | 9 | 13 | 337 | 13 | 321 | 2.23e-41 | 148 |
| MS.gene04775.t1 | AT3G60510 | 30.933 | 375 | 216 | 11 | 20 | 368 | 52 | 409 | 2.47e-38 | 142 |
| MS.gene04775.t1 | AT3G60510 | 32.342 | 269 | 170 | 8 | 20 | 287 | 52 | 309 | 1.13e-28 | 114 |
| MS.gene04775.t1 | AT4G16800 | 27.473 | 182 | 119 | 4 | 4 | 182 | 41 | 212 | 6.09e-11 | 63.2 |
Find 111 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTTGATGGTTTCCACTTT+GGG | 0.233100 | 4.2:+1998258 | None:intergenic |
| TTCATGGCGTTGAGAGCTTT+GGG | 0.269255 | 4.2:+2002381 | None:intergenic |
| TTCATTCAAGGAGGCCCTTT+TGG | 0.286601 | 4.2:-2000071 | MS.gene04775:CDS |
| GTTCTTGCAATGCCAGAAAA+TGG | 0.288824 | 4.2:-2000546 | MS.gene04775:CDS |
| CCTGAGATAATTTCTTCATT+TGG | 0.297730 | 4.2:-1999618 | MS.gene04775:CDS |
| CCATCCATGAAACTTATATA+TGG | 0.298685 | 4.2:+2000747 | None:intergenic |
| GTTCATGGCGTTGAGAGCTT+TGG | 0.301149 | 4.2:+2002380 | None:intergenic |
| ACCAGAACACATTTGACATT+TGG | 0.311682 | 4.2:+2001949 | None:intergenic |
| GATGGAATAACAATGGGTTT+TGG | 0.315013 | 4.2:-2000729 | MS.gene04775:CDS |
| CTGACTGCAGGTGCTTATCT+TGG | 0.324350 | 4.2:-2000178 | MS.gene04775:intron |
| AATGCAGGTATGGATATTAA+AGG | 0.328338 | 4.2:-2001721 | MS.gene04775:intron |
| CTGCGACATGATTTCGTAGA+AGG | 0.333713 | 4.2:-1999106 | MS.gene04775:CDS |
| AACCTTGATGGTTTCCACTT+TGG | 0.340812 | 4.2:+1998257 | None:intergenic |
| CCAGAACACATTTGACATTT+GGG | 0.350947 | 4.2:+2001950 | None:intergenic |
| CTCGCCCACTTCTGCTCCTA+AGG | 0.362509 | 4.2:+1998193 | None:intergenic |
| TCAACTTCCTCCAACCTTGA+TGG | 0.363288 | 4.2:+1998245 | None:intergenic |
| AGTACTTGTTTGTCAAGAAA+AGG | 0.372402 | 4.2:+1999329 | None:intergenic |
| TTTAACTGTGCCTCACTGTC+CGG | 0.378341 | 4.2:+1999651 | None:intergenic |
| ATATGAGCAAATCCTACATC+TGG | 0.391243 | 4.2:+2000510 | None:intergenic |
| CTATTGGTTATTTAGTTCTC+AGG | 0.393990 | 4.2:-1999721 | MS.gene04775:intron |
| TAAAAGTTATCTTGATGAAT+GGG | 0.394272 | 4.2:-2001980 | MS.gene04775:CDS |
| GAAACCATATATAAGTTTCA+TGG | 0.401334 | 4.2:-2000751 | MS.gene04775:CDS |
| TATGTGCCATCGGGAAAGTT+AGG | 0.405875 | 4.2:-2000094 | MS.gene04775:CDS |
| ATGCAGGTATGGATATTAAA+GGG | 0.406021 | 4.2:-2001720 | MS.gene04775:intron |
| GCAATGCCAGAAAATGGAAT+TGG | 0.413015 | 4.2:-2000540 | MS.gene04775:CDS |
| ATAAAAGTTATCTTGATGAA+TGG | 0.413865 | 4.2:-2001981 | MS.gene04775:CDS |
| CATACAAGTTTGTTGCCAAA+AGG | 0.414169 | 4.2:+2000056 | None:intergenic |
| GGCAACACCGTTAGAATTAA+CGG | 0.431120 | 4.2:+2002422 | None:intergenic |
| CCCAAATGTCAAATGTGTTC+TGG | 0.432136 | 4.2:-2001950 | MS.gene04775:CDS |
| GAGATAATTTCTTCATTTGG+AGG | 0.438462 | 4.2:-1999615 | MS.gene04775:CDS |
| AAATAAGAAACCTAGGTTCA+TGG | 0.454268 | 4.2:+2002365 | None:intergenic |
| AGTATTAGTGGATAAAGATC+AGG | 0.459616 | 4.2:-1999074 | MS.gene04775:intron |
| CAGTCGAGCACTGACTCTAA+TGG | 0.460203 | 4.2:-1999549 | MS.gene04775:intron |
| CCAACATATATTGCATCTGC+TGG | 0.461407 | 4.2:+2000130 | None:intergenic |
| TTCATGGATGGAATAACAAT+GGG | 0.461776 | 4.2:-2000735 | MS.gene04775:CDS |
| GTACTTGTTTGTCAAGAAAA+GGG | 0.464988 | 4.2:+1999330 | None:intergenic |
| AAGCACACCTTTAGTGCAAA+AGG | 0.469186 | 4.2:-2001671 | MS.gene04775:intron |
| GGAATTGGCTTATCTGGTCA+TGG | 0.469307 | 4.2:-2000708 | MS.gene04775:CDS |
| GGTGCTTATCTTGGATTGAC+TGG | 0.469940 | 4.2:-2000169 | MS.gene04775:CDS |
| GATGCAATATATGTTGGCTT+AGG | 0.477695 | 4.2:-2000124 | MS.gene04775:CDS |
| TCTATTTCTAGTTGCTGAGT+GGG | 0.479340 | 4.2:-1999395 | MS.gene04775:intron |
| TAGTTCTCAGGATCCCCATC+AGG | 0.480036 | 4.2:-1999709 | MS.gene04775:CDS |
| TTACCAACAGCTCCTTCTCC+TGG | 0.486422 | 4.2:+2000474 | None:intergenic |
| GCTCTCCAAGGCCTTGCAAA+AGG | 0.490434 | 4.2:-1999364 | MS.gene04775:CDS |
| TTAACTGTGCCTCACTGTCC+GGG | 0.494046 | 4.2:+1999652 | None:intergenic |
| CCAAATGAAGAAATTATCTC+AGG | 0.496539 | 4.2:+1999618 | None:intergenic |
| ATACAAGTTTGTTGCCAAAA+GGG | 0.500776 | 4.2:+2000057 | None:intergenic |
| TGGGGCGATCGAGGGTGAGA+AGG | 0.503187 | 4.2:+2002400 | None:intergenic |
| ATCATACATACCGGCACAAA+AGG | 0.503920 | 4.2:+2001906 | None:intergenic |
| CATATAGCGGCTCAAAGTCC+AGG | 0.508132 | 4.2:-2000492 | MS.gene04775:CDS |
| TCTTGGATTGACTGGAAAGA+GGG | 0.508317 | 4.2:-2000161 | MS.gene04775:CDS |
| GGGAAAGTTAGGTTCATTCA+AGG | 0.518997 | 4.2:-2000083 | MS.gene04775:CDS |
| AAAGTACTTTGATGTCCTGA+TGG | 0.520744 | 4.2:+1999694 | None:intergenic |
| TCTGCCGTTGCCTCTGCACT+AGG | 0.522855 | 4.2:-1999304 | MS.gene04775:CDS |
| ATTGGCTTGTTCCCAGATGT+AGG | 0.524294 | 4.2:-2000522 | MS.gene04775:CDS |
| AGGTGTCCGAGCAGTATTAG+TGG | 0.524429 | 4.2:-1999086 | MS.gene04775:CDS |
| AAGACGGCTTCAACCTCACT+TGG | 0.525028 | 4.2:+1998221 | None:intergenic |
| CATTAGAGTCAGTGCTCGAC+TGG | 0.527781 | 4.2:+1999550 | None:intergenic |
| TTTCATGGATGGAATAACAA+TGG | 0.527960 | 4.2:-2000736 | MS.gene04775:CDS |
| ATCTTGGATTGACTGGAAAG+AGG | 0.530642 | 4.2:-2000162 | MS.gene04775:CDS |
| TTCTATTTCTAGTTGCTGAG+TGG | 0.533730 | 4.2:-1999396 | MS.gene04775:intron |
| TGCTCCTAAGGGTTTAAAGA+CGG | 0.540590 | 4.2:+1998205 | None:intergenic |
| TGAGAGCTTTGGGGCGATCG+AGG | 0.541267 | 4.2:+2002391 | None:intergenic |
| AAGTACTTTGATGTCCTGAT+GGG | 0.541762 | 4.2:+1999695 | None:intergenic |
| CCAGCAGATGCAATATATGT+TGG | 0.544693 | 4.2:-2000130 | MS.gene04775:CDS |
| GTGGAAACCATCAAGGTTGG+AGG | 0.546371 | 4.2:-1998252 | MS.gene04775:CDS |
| GGGGCGATCGAGGGTGAGAA+GGG | 0.549823 | 4.2:+2002401 | None:intergenic |
| AAAGTGGAAACCATCAAGGT+TGG | 0.553124 | 4.2:-1998255 | MS.gene04775:CDS |
| GAAGCCGTCTTTAAACCCTT+AGG | 0.555410 | 4.2:-1998209 | MS.gene04775:CDS |
| GAGAGCTTTGGGGCGATCGA+GGG | 0.558416 | 4.2:+2002392 | None:intergenic |
| CCTTTCCATCGAAAATTACA+CGG | 0.558704 | 4.2:+1998166 | None:intergenic |
| TCGCCCACTTCTGCTCCTAA+GGG | 0.559819 | 4.2:+1998194 | None:intergenic |
| TAAACCCTTAGGAGCAGAAG+TGG | 0.561095 | 4.2:-1998198 | MS.gene04775:CDS |
| GGAACACACTATGTGCCATC+GGG | 0.563387 | 4.2:-2000103 | MS.gene04775:CDS |
| ACCCAAAGTGGAAACCATCA+AGG | 0.563693 | 4.2:-1998259 | MS.gene04775:CDS |
| GTTTGTCAAGAAAAGGGAGA+AGG | 0.565056 | 4.2:+1999336 | None:intergenic |
| CCATATATAAGTTTCATGGA+TGG | 0.569201 | 4.2:-2000747 | MS.gene04775:CDS |
| TTTGCCTAGTGCAGAGGCAA+CGG | 0.570032 | 4.2:+1999300 | None:intergenic |
| GCTCTCAACGCCATGAACCT+AGG | 0.579390 | 4.2:-2002375 | MS.gene04775:intron |
| TTTGCATATCAAAGAATACT+CGG | 0.580158 | 4.2:+2000788 | None:intergenic |
| AGGAACACACTATGTGCCAT+CGG | 0.580813 | 4.2:-2000104 | MS.gene04775:CDS |
| CTTTATCCACTAATACTGCT+CGG | 0.582905 | 4.2:+1999080 | None:intergenic |
| TCATGGCGTTGAGAGCTTTG+GGG | 0.585204 | 4.2:+2002382 | None:intergenic |
| AGTCCAGGAGAAGGAGCTGT+TGG | 0.585383 | 4.2:-2000477 | MS.gene04775:intron |
| ATGTCGCAGCGAAGACCTCA+AGG | 0.588206 | 4.2:+1999120 | None:intergenic |
| ATTCACTGCAGAACCCAAAG+TGG | 0.590706 | 4.2:-1998271 | MS.gene04775:intron |
| GCGGCTCAAAGTCCAGGAGA+AGG | 0.592993 | 4.2:-2000486 | MS.gene04775:CDS |
| TATGAGCAAATCCTACATCT+GGG | 0.594751 | 4.2:+2000511 | None:intergenic |
| TTTGTCAAGAAAAGGGAGAA+GGG | 0.596278 | 4.2:+1999337 | None:intergenic |
| CTGAGTATCGCATTGCCTTG+AGG | 0.604394 | 4.2:-1999135 | MS.gene04775:CDS |
| ACCGGCACAAAAGGCACGAG+GGG | 0.606107 | 4.2:+2001915 | None:intergenic |
| GGAGGAAGTTGAACCAAGTG+AGG | 0.619571 | 4.2:-1998234 | MS.gene04775:CDS |
| AATGAACCTAACTTTCCCGA+TGG | 0.624467 | 4.2:+2000088 | None:intergenic |
| ATGGCTGAAGAATTCGTCAA+AGG | 0.630406 | 4.2:-2002447 | MS.gene04775:CDS |
| AGCAAGATATGAGTCAAACC+CGG | 0.631831 | 4.2:-1999670 | MS.gene04775:CDS |
| AAAGGCACCGTTAATTCTAA+CGG | 0.635338 | 4.2:-2002429 | MS.gene04775:CDS |
| TGCAGGTATGGATATTAAAG+GGG | 0.636890 | 4.2:-2001719 | MS.gene04775:intron |
| GGTTGTTGCTGAAATACAGA+AGG | 0.644020 | 4.2:-2001698 | MS.gene04775:CDS |
| CTTTCCATCGAAAATTACAC+GGG | 0.647825 | 4.2:+1998167 | None:intergenic |
| AAACGACTGTGAATTATCCA+CGG | 0.650353 | 4.2:-1999278 | MS.gene04775:intron |
| TGGGCTAATGAAGCTCTCCA+AGG | 0.651121 | 4.2:-1999376 | MS.gene04775:CDS |
| AAACCCTTAGGAGCAGAAGT+GGG | 0.666488 | 4.2:-1998197 | MS.gene04775:CDS |
| TGTAGGATTTGCTCATATAG+CGG | 0.671989 | 4.2:-2000505 | MS.gene04775:CDS |
| TACCGGCACAAAAGGCACGA+GGG | 0.677239 | 4.2:+2001914 | None:intergenic |
| AGTACTTTGATGTCCTGATG+GGG | 0.677245 | 4.2:+1999696 | None:intergenic |
| AAAGTTAGGTTCATTCAAGG+AGG | 0.694937 | 4.2:-2000080 | MS.gene04775:CDS |
| CCGCTATCGTATCATAACAG+AGG | 0.696061 | 4.2:-2000685 | MS.gene04775:intron |
| TGAGTCAAACCCGGACAGTG+AGG | 0.708212 | 4.2:-1999661 | MS.gene04775:CDS |
| ATACCGGCACAAAAGGCACG+AGG | 0.714810 | 4.2:+2001913 | None:intergenic |
| ATCTGTTATTGAAATCATCG+AGG | 0.717212 | 4.2:-1999586 | MS.gene04775:CDS |
| CCTCTGTTATGATACGATAG+CGG | 0.726952 | 4.2:+2000685 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTACAAATGTAATCTAAT+AGG | + | chr4.2:1999646-1999665 | None:intergenic | 15.0% |
| !! | ATTAGATTACATTTGTAATT+TGG | - | chr4.2:1999646-1999665 | MS.gene04775:CDS | 15.0% |
| !! | TTGTTTGAACTTATTTATAT+TGG | - | chr4.2:2001900-2001919 | MS.gene04775:intron | 15.0% |
| !!! | ATTGATAAATTTTACTTTTG+CGG | - | chr4.2:2001702-2001721 | MS.gene04775:CDS | 15.0% |
| !!! | CTTCAATGTTTTAAAATAAT+TGG | - | chr4.2:1999413-1999432 | MS.gene04775:intron | 15.0% |
| !!! | GAATTTTTAGTTAATTATGT+AGG | - | chr4.2:1998521-1998540 | MS.gene04775:intron | 15.0% |
| !!! | TTGATTCATATTTTAATGAA+AGG | - | chr4.2:1998424-1998443 | MS.gene04775:intron | 15.0% |
| !!! | TTTTTTTTTTTTTGAGCAAA+AGG | + | chr4.2:2002252-2002271 | None:intergenic | 15.0% |
| !! | AATCTATCAACAACAAAAAA+AGG | + | chr4.2:2002220-2002239 | None:intergenic | 20.0% |
| !! | ACAAAAAAGATGTAACTAAA+GGG | + | chr4.2:1999580-1999599 | None:intergenic | 20.0% |
| !! | ATAAAAGTTATCTTGATGAA+TGG | - | chr4.2:1998647-1998666 | MS.gene04775:intron | 20.0% |
| !! | CTTAACTTAAGAAGTTTAAA+GGG | + | chr4.2:2000645-2000664 | None:intergenic | 20.0% |
| !! | GTTTATTCGATGATTTAATA+AGG | - | chr4.2:2000218-2000237 | MS.gene04775:intron | 20.0% |
| !! | TAAAAGTTATCTTGATGAAT+GGG | - | chr4.2:1998648-1998667 | MS.gene04775:intron | 20.0% |
| !! | TAAAATATTCAAACCGAATT+CGG | + | chr4.2:2000430-2000449 | None:intergenic | 20.0% |
| !! | TCTTAACTTAAGAAGTTTAA+AGG | + | chr4.2:2000646-2000665 | None:intergenic | 20.0% |
| !! | TTCTTAAGTTAAGATTGAAT+TGG | - | chr4.2:2000652-2000671 | MS.gene04775:intron | 20.0% |
| !! | TTTATATTTGGAAATCTTTG+TGG | - | chr4.2:1998604-1998623 | MS.gene04775:intron | 20.0% |
| !!! | AAAAATATGGTGATAATGAT+AGG | + | chr4.2:2001109-2001128 | None:intergenic | 20.0% |
| !!! | AAAAGGTATTCATTTTGAAT+TGG | + | chr4.2:1999324-1999343 | None:intergenic | 20.0% |
| !!! | GTTATGTTTTGTTCAATATT+TGG | - | chr4.2:2002301-2002320 | MS.gene04775:intron | 20.0% |
| !!! | TATGAGTATAAAAGCATAAA+CGG | + | chr4.2:2001777-2001796 | None:intergenic | 20.0% |
| !!! | TTGGTAATAAACAGTTATTA+AGG | - | chr4.2:1999432-1999451 | MS.gene04775:intron | 20.0% |
| ! | AAAAAAAACCATGACACATA+TGG | + | chr4.2:2000758-2000777 | None:intergenic | 25.0% |
| ! | AACACTCATTAAAATCATGT+TGG | + | chr4.2:2001430-2001449 | None:intergenic | 25.0% |
| ! | ACTATTAAAACATCTAGATG+TGG | - | chr4.2:2000326-2000345 | MS.gene04775:intron | 25.0% |
| ! | ATGAAAGGTTAAGAATTTGA+TGG | + | chr4.2:1999287-1999306 | None:intergenic | 25.0% |
| ! | ATTAAGCAACTATACTATAG+CGG | + | chr4.2:1999974-1999993 | None:intergenic | 25.0% |
| ! | ATTGAACAAAACATAACTGT+GGG | + | chr4.2:2002298-2002317 | None:intergenic | 25.0% |
| ! | CAAAAAAAGGATTTGTACAA+AGG | + | chr4.2:2002207-2002226 | None:intergenic | 25.0% |
| ! | GAAACCATATATAAGTTTCA+TGG | - | chr4.2:1999877-1999896 | MS.gene04775:intron | 25.0% |
| ! | GACAAAAAAGATGTAACTAA+AGG | + | chr4.2:1999581-1999600 | None:intergenic | 25.0% |
| ! | GCTAATAATATCTACACAAA+AGG | + | chr4.2:1999341-1999360 | None:intergenic | 25.0% |
| ! | TAAAATCATGTTGGAAAACA+TGG | + | chr4.2:2001421-2001440 | None:intergenic | 25.0% |
| ! | TATGAAAATAGTGCACAAAA+AGG | + | chr4.2:2000280-2000299 | None:intergenic | 25.0% |
| ! | TATTGAACAAAACATAACTG+TGG | + | chr4.2:2002299-2002318 | None:intergenic | 25.0% |
| ! | TCACCAAAAAAAAAAGGAAA+AGG | + | chr4.2:2001386-2001405 | None:intergenic | 25.0% |
| ! | TGAATGAAAATAAGAAACCT+AGG | + | chr4.2:1998273-1998292 | None:intergenic | 25.0% |
| ! | TTCAGTGTAAGCAAAAAATA+TGG | + | chr4.2:2001122-2001141 | None:intergenic | 25.0% |
| ! | TTTGCATATCAAAGAATACT+CGG | + | chr4.2:1999843-1999862 | None:intergenic | 25.0% |
| !! | ATGAGTATAAAAGCATAAAC+GGG | + | chr4.2:2001776-2001795 | None:intergenic | 25.0% |
| !! | GCATGGTTTTTATAAATGAA+AGG | + | chr4.2:1999302-1999321 | None:intergenic | 25.0% |
| !! | GTTCCTTTTCCTTTTTTTTT+TGG | - | chr4.2:2001380-2001399 | MS.gene04775:intron | 25.0% |
| !! | TTTTATTAACACATTTCCAG+AGG | - | chr4.2:2000056-2000075 | MS.gene04775:intron | 25.0% |
| !!! | AACAGCTTATTAGTTTTCAT+AGG | - | chr4.2:2000364-2000383 | MS.gene04775:intron | 25.0% |
| !!! | TAGGTGTTGATTGTTTATTA+TGG | - | chr4.2:1998458-1998477 | MS.gene04775:intron | 25.0% |
| !!! | TTGTTGGCTTGATTTATATT+TGG | - | chr4.2:1998592-1998611 | MS.gene04775:intron | 25.0% |
| !!! | TTTCCTTTTTTTTTTGGTGA+TGG | - | chr4.2:2001386-2001405 | MS.gene04775:intron | 25.0% |
| !!! | TTTTCATAGGTTTTGTTGAA+AGG | - | chr4.2:2000377-2000396 | MS.gene04775:intron | 25.0% |
| AAAAGACTCGAGCAATTTAA+AGG | + | chr4.2:2000608-2000627 | None:intergenic | 30.0% | |
| AAATAAGAAACCTAGGTTCA+TGG | + | chr4.2:1998266-1998285 | None:intergenic | 30.0% | |
| AACTTAAGAAGTTTAAAGGG+TGG | + | chr4.2:2000642-2000661 | None:intergenic | 30.0% | |
| AAGCATGTAAAAAATGCAAC+TGG | + | chr4.2:1999017-1999036 | None:intergenic | 30.0% | |
| AAGTTATCCTCAAAAGCTTA+TGG | + | chr4.2:2001991-2002010 | None:intergenic | 30.0% | |
| AATCTATCTGCATATATTGG+GGG | - | chr4.2:2002157-2002176 | MS.gene04775:intron | 30.0% | |
| AATGCAGGTATGGATATTAA+AGG | - | chr4.2:1998907-1998926 | MS.gene04775:intron | 30.0% | |
| ACATGCATGCAGAAAATTAT+TGG | - | chr4.2:2001662-2001681 | MS.gene04775:intron | 30.0% | |
| ACCAATCTATCTGCATATAT+TGG | - | chr4.2:2002154-2002173 | MS.gene04775:intron | 30.0% | |
| ACGATCTTACACAAAACTAT+TGG | - | chr4.2:2000891-2000910 | MS.gene04775:intron | 30.0% | |
| AGTACTTGTTTGTCAAGAAA+AGG | + | chr4.2:2001302-2001321 | None:intergenic | 30.0% | |
| ATCTGTTATTGAAATCATCG+AGG | - | chr4.2:2001042-2001061 | MS.gene04775:intron | 30.0% | |
| ATGCAGGTATGGATATTAAA+GGG | - | chr4.2:1998908-1998927 | MS.gene04775:intron | 30.0% | |
| CAATCTATCTGCATATATTG+GGG | - | chr4.2:2002156-2002175 | MS.gene04775:intron | 30.0% | |
| CCAAATGAAGAAATTATCTC+AGG | + | chr4.2:2001013-2001032 | None:intergenic | 30.0% | |
| CCAATCTATCTGCATATATT+GGG | - | chr4.2:2002155-2002174 | MS.gene04775:intron | 30.0% | |
| CCATATATAAGTTTCATGGA+TGG | - | chr4.2:1999881-1999900 | MS.gene04775:intron | 30.0% | |
| CCATCCATGAAACTTATATA+TGG | + | chr4.2:1999884-1999903 | None:intergenic | 30.0% | |
| CCTAAAATATGCAGCATAAT+AGG | + | chr4.2:1999811-1999830 | None:intergenic | 30.0% | |
| CCTGAGATAATTTCTTCATT+TGG | - | chr4.2:2001010-2001029 | MS.gene04775:intron | 30.0% | |
| CTTCAAGATATTACAATTGG+TGG | - | chr4.2:2001727-2001746 | MS.gene04775:intron | 30.0% | |
| GAGATAATTTCTTCATTTGG+AGG | - | chr4.2:2001013-2001032 | MS.gene04775:intron | 30.0% | |
| GATGATTTAATAAGGACTGA+GGG | - | chr4.2:2000226-2000245 | MS.gene04775:intron | 30.0% | |
| GCACTTCAAGATATTACAAT+TGG | - | chr4.2:2001724-2001743 | MS.gene04775:intron | 30.0% | |
| GTACTTGTTTGTCAAGAAAA+GGG | + | chr4.2:2001301-2001320 | None:intergenic | 30.0% | |
| TATGACTCAATCATACATAC+CGG | + | chr4.2:1998734-1998753 | None:intergenic | 30.0% | |
| TCACCATCACCAAAAAAAAA+AGG | + | chr4.2:2001392-2001411 | None:intergenic | 30.0% | |
| TCTGACTGATTATTGTCATA+AGG | - | chr4.2:1998365-1998384 | MS.gene04775:intron | 30.0% | |
| TTAAATATGCAACTCTTGCT+CGG | - | chr4.2:1999460-1999479 | MS.gene04775:intron | 30.0% | |
| TTCATGGATGGAATAACAAT+GGG | - | chr4.2:1999893-1999912 | MS.gene04775:intron | 30.0% | |
| TTGCAGATGTTCTACTTATT+TGG | - | chr4.2:1998841-1998860 | MS.gene04775:intron | 30.0% | |
| TTTCATGGATGGAATAACAA+TGG | - | chr4.2:1999892-1999911 | MS.gene04775:intron | 30.0% | |
| ! | AGTATTAGTGGATAAAGATC+AGG | - | chr4.2:2001554-2001573 | MS.gene04775:intron | 30.0% |
| ! | CATATTTCCATAAGCTTTTG+AGG | - | chr4.2:2001981-2002000 | MS.gene04775:CDS | 30.0% |
| ! | CCTATTATGCTGCATATTTT+AGG | - | chr4.2:1999808-1999827 | MS.gene04775:intron | 30.0% |
| ! | GTATTCATTTTGAATTGGCA+TGG | + | chr4.2:1999319-1999338 | None:intergenic | 30.0% |
| ! | TGAGTATAAAAGCATAAACG+GGG | + | chr4.2:2001775-2001794 | None:intergenic | 30.0% |
| ! | TTTTGCACAAGTTGTTAAAG+TGG | - | chr4.2:1999768-1999787 | MS.gene04775:intron | 30.0% |
| !! | ATACAAGTTTGTTGCCAAAA+GGG | + | chr4.2:2000574-2000593 | None:intergenic | 30.0% |
| !! | CTATTGGTTATTTAGTTCTC+AGG | - | chr4.2:2000907-2000926 | MS.gene04775:intron | 30.0% |
| !! | TTGAATATTTTACTGACTGC+AGG | - | chr4.2:2000438-2000457 | MS.gene04775:intron | 30.0% |
| !!! | ATAACAATGGGTTTTGGAAT+TGG | - | chr4.2:1999905-1999924 | MS.gene04775:intron | 30.0% |
| !!! | GCATTTTTTACATGCTTCAT+TGG | - | chr4.2:1999020-1999039 | MS.gene04775:intron | 30.0% |
| !!! | TCTACTTATTTGGTTTTGAG+TGG | - | chr4.2:1998851-1998870 | MS.gene04775:intron | 30.0% |
| AAAAGACATCATGCTGACAA+TGG | + | chr4.2:1999388-1999407 | None:intergenic | 35.0% | |
| AAACGACTGTGAATTATCCA+CGG | - | chr4.2:2001350-2001369 | MS.gene04775:intron | 35.0% | |
| AAAGTTAGGTTCATTCAAGG+AGG | - | chr4.2:2000548-2000567 | MS.gene04775:CDS | 35.0% | |
| AAATCTTTGTGGTGCAGAAA+TGG | - | chr4.2:1998615-1998634 | MS.gene04775:intron | 35.0% | |
| AAGTACTTTGATGTCCTGAT+GGG | + | chr4.2:2000936-2000955 | None:intergenic | 35.0% | |
| AATTGCACCTATACTTGGTT+TGG | + | chr4.2:2001641-2001660 | None:intergenic | 35.0% | |
| ACCAGAACACATTTGACATT+TGG | + | chr4.2:1998682-1998701 | None:intergenic | 35.0% | |
| ATATGAGCAAATCCTACATC+TGG | + | chr4.2:2000121-2000140 | None:intergenic | 35.0% | |
| ATCGTATCATAACAGAGGTA+TGG | - | chr4.2:1999948-1999967 | MS.gene04775:intron | 35.0% | |
| ATGTCAATTGCACCTATACT+TGG | + | chr4.2:2001646-2001665 | None:intergenic | 35.0% | |
| ATTAATGGTCAATGCAGGTA+TGG | - | chr4.2:1998897-1998916 | MS.gene04775:intron | 35.0% | |
| CACAAAAAGGAGAAATGGAA+GGG | + | chr4.2:2000267-2000286 | None:intergenic | 35.0% | |
| CAGATGCAATTCAAAGGTTA+AGG | + | chr4.2:1999537-1999556 | None:intergenic | 35.0% | |
| CCAGAACACATTTGACATTT+GGG | + | chr4.2:1998681-1998700 | None:intergenic | 35.0% | |
| CCCAATATATGCAGATAGAT+TGG | + | chr4.2:2002158-2002177 | None:intergenic | 35.0% | |
| CGATGATTTAATAAGGACTG+AGG | - | chr4.2:2000225-2000244 | MS.gene04775:intron | 35.0% | |
| CTGCAGATAAACTAAGATCT+CGG | + | chr4.2:1999183-1999202 | None:intergenic | 35.0% | |
| CTTATATTACCGACACAATC+AGG | + | chr4.2:2000707-2000726 | None:intergenic | 35.0% | |
| CTTTATCCACTAATACTGCT+CGG | + | chr4.2:2001551-2001570 | None:intergenic | 35.0% | |
| GAAAAGTTGCATAGCAAAGA+AGG | + | chr4.2:1999097-1999116 | None:intergenic | 35.0% | |
| TAGTGCACAAAAAGGAGAAA+TGG | + | chr4.2:2000272-2000291 | None:intergenic | 35.0% | |
| TATGAGCAAATCCTACATCT+GGG | + | chr4.2:2000120-2000139 | None:intergenic | 35.0% | |
| TCATAATTGCCTTCTAAACC+AGG | - | chr4.2:2001792-2001811 | MS.gene04775:intron | 35.0% | |
| TGCAGGTATGGATATTAAAG+GGG | - | chr4.2:1998909-1998928 | MS.gene04775:intron | 35.0% | |
| TGCATGCAGAAAATTATTGG+AGG | - | chr4.2:2001665-2001684 | MS.gene04775:intron | 35.0% | |
| TTAGAATGTACTTCCAGTTG+AGG | - | chr4.2:1999500-1999519 | MS.gene04775:intron | 35.0% | |
| TTTGTCAAGAAAAGGGAGAA+GGG | + | chr4.2:2001294-2001313 | None:intergenic | 35.0% | |
| ! | AAAGTACTTTGATGTCCTGA+TGG | + | chr4.2:2000937-2000956 | None:intergenic | 35.0% |
| ! | AACAAGCCAATTCCATTTTC+TGG | + | chr4.2:2000097-2000116 | None:intergenic | 35.0% |
| ! | AACATAACTGTGGGTTAAAG+AGG | + | chr4.2:2002289-2002308 | None:intergenic | 35.0% |
| ! | ATACCTGCATTGACCATTAA+TGG | + | chr4.2:1998898-1998917 | None:intergenic | 35.0% |
| ! | ATACTCAGTTTTCATTACGC+TGG | + | chr4.2:2001481-2001500 | None:intergenic | 35.0% |
| ! | ATGAAAGGATGATTCTAGCT+AGG | - | chr4.2:1998439-1998458 | MS.gene04775:intron | 35.0% |
| ! | ATTGAGACCTTTTGCACTAA+AGG | + | chr4.2:1998967-1998986 | None:intergenic | 35.0% |
| ! | CAGCTTAAAGTGAGTCTTTT+TGG | - | chr4.2:2001871-2001890 | MS.gene04775:intron | 35.0% |
| ! | GATGATGATGATGATGATGA+TGG | + | chr4.2:1999075-1999094 | None:intergenic | 35.0% |
| ! | GTTTTTCCACTTACTTTCTG+TGG | - | chr4.2:2000399-2000418 | MS.gene04775:intron | 35.0% |
| ! | TAGATTCTAAAGAGTTTGCC+TGG | + | chr4.2:2001813-2001832 | None:intergenic | 35.0% |
| ! | TGTAGGATTTGCTCATATAG+CGG | - | chr4.2:2000123-2000142 | MS.gene04775:CDS | 35.0% |
| !! | AAAGGCACCGTTAATTCTAA+CGG | - | chr4.2:1998199-1998218 | MS.gene04775:CDS | 35.0% |
| !! | CATACAAGTTTGTTGCCAAA+AGG | + | chr4.2:2000575-2000594 | None:intergenic | 35.0% |
| !! | GATGCAATATATGTTGGCTT+AGG | - | chr4.2:2000504-2000523 | MS.gene04775:CDS | 35.0% |
| !! | GATGGAATAACAATGGGTTT+TGG | - | chr4.2:1999899-1999918 | MS.gene04775:intron | 35.0% |
| !! | TCTATTTCTAGTTGCTGAGT+GGG | - | chr4.2:2001233-2001252 | MS.gene04775:intron | 35.0% |
| !! | TTCTATTTCTAGTTGCTGAG+TGG | - | chr4.2:2001232-2001251 | MS.gene04775:intron | 35.0% |
| !!! | CTTATTTGGTTTTGAGTGGT+AGG | - | chr4.2:1998855-1998874 | MS.gene04775:intron | 35.0% |
| !!! | GTTTTGAGAGTCACCATTAA+TGG | - | chr4.2:1998882-1998901 | MS.gene04775:intron | 35.0% |
| AAAAGGAGAAATGGAAGGGT+TGG | + | chr4.2:2000263-2000282 | None:intergenic | 40.0% | |
| AAACATCTAGATGTGGTCTC+TGG | - | chr4.2:2000333-2000352 | MS.gene04775:intron | 40.0% | |
| AAAGTGGAAACCATCAAGGT+TGG | - | chr4.2:2002373-2002392 | MS.gene04775:intron | 40.0% | |
| AAGAGTTTGCCTGGTTTAGA+AGG | + | chr4.2:2001804-2001823 | None:intergenic | 40.0% | |
| AAGCACACCTTTAGTGCAAA+AGG | - | chr4.2:1998957-1998976 | MS.gene04775:intron | 40.0% | |
| AATGAACCTAACTTTCCCGA+TGG | + | chr4.2:2000543-2000562 | None:intergenic | 40.0% | |
| AGACCTCAATCACATCTGAT+AGG | + | chr4.2:1999240-1999259 | None:intergenic | 40.0% | |
| AGAGACACTGAACTTCCTTA+TGG | - | chr4.2:1999605-1999624 | MS.gene04775:CDS | 40.0% | |
| AGCAAGATATGAGTCAAACC+CGG | - | chr4.2:2000958-2000977 | MS.gene04775:intron | 40.0% | |
| AGTACTTTGATGTCCTGATG+GGG | + | chr4.2:2000935-2000954 | None:intergenic | 40.0% | |
| ATAAGGAAGTTCAGTGTCTC+TGG | + | chr4.2:1999606-1999625 | None:intergenic | 40.0% | |
| ATCATACATACCGGCACAAA+AGG | + | chr4.2:1998725-1998744 | None:intergenic | 40.0% | |
| ATCTTGGATTGACTGGAAAG+AGG | - | chr4.2:2000466-2000485 | MS.gene04775:intron | 40.0% | |
| ATGGCTGAAGAATTCGTCAA+AGG | - | chr4.2:1998181-1998200 | MS.gene04775:CDS | 40.0% | |
| CAACCTATCAGATGTGATTG+AGG | - | chr4.2:1999234-1999253 | MS.gene04775:intron | 40.0% | |
| CACACACAGAAACATCCATA+AGG | + | chr4.2:1999623-1999642 | None:intergenic | 40.0% | |
| CATCTGCTTCTCTCATTACA+GGG | - | chr4.2:1999551-1999570 | MS.gene04775:CDS | 40.0% | |
| CCAACATATATTGCATCTGC+TGG | + | chr4.2:2000501-2000520 | None:intergenic | 40.0% | |
| CCAGCAGATGCAATATATGT+TGG | - | chr4.2:2000498-2000517 | MS.gene04775:CDS | 40.0% | |
| CCCAAATGTCAAATGTGTTC+TGG | - | chr4.2:1998678-1998697 | MS.gene04775:intron | 40.0% | |
| CCTCTGTTATGATACGATAG+CGG | + | chr4.2:1999946-1999965 | None:intergenic | 40.0% | |
| CGAGATCTTAGTTTATCTGC+AGG | - | chr4.2:1999181-1999200 | MS.gene04775:intron | 40.0% | |
| GAGAAGCAGATGCAATTCAA+AGG | + | chr4.2:1999543-1999562 | None:intergenic | 40.0% | |
| GAGATTCCACAGAAAGTAAG+TGG | + | chr4.2:2000408-2000427 | None:intergenic | 40.0% | |
| GATCTTAGTTTATCTGCAGG+CGG | - | chr4.2:1999184-1999203 | MS.gene04775:intron | 40.0% | |
| GCAATGCCAGAAAATGGAAT+TGG | - | chr4.2:2000088-2000107 | MS.gene04775:CDS | 40.0% | |
| GCACAAAAAGGAGAAATGGA+AGG | + | chr4.2:2000268-2000287 | None:intergenic | 40.0% | |
| GGCAACACCGTTAGAATTAA+CGG | + | chr4.2:1998209-1998228 | None:intergenic | 40.0% | |
| GGGAAAGTTAGGTTCATTCA+AGG | - | chr4.2:2000545-2000564 | MS.gene04775:CDS | 40.0% | |
| GGTTGTTGCTGAAATACAGA+AGG | - | chr4.2:1998930-1998949 | MS.gene04775:intron | 40.0% | |
| GTTCTTGCAATGCCAGAAAA+TGG | - | chr4.2:2000082-2000101 | MS.gene04775:CDS | 40.0% | |
| GTTTGTCAAGAAAAGGGAGA+AGG | + | chr4.2:2001295-2001314 | None:intergenic | 40.0% | |
| TCACCATTAATGGTCAATGC+AGG | - | chr4.2:1998892-1998911 | MS.gene04775:intron | 40.0% | |
| TCTTGGATTGACTGGAAAGA+GGG | - | chr4.2:2000467-2000486 | MS.gene04775:intron | 40.0% | |
| TGCATTCACCATATGTGTCA+TGG | - | chr4.2:2000747-2000766 | MS.gene04775:CDS | 40.0% | |
| TGCTCCTAAGGGTTTAAAGA+CGG | + | chr4.2:2002426-2002445 | None:intergenic | 40.0% | |
| TGTGTGTGAGTTAGTGTTGT+TGG | - | chr4.2:1998576-1998595 | MS.gene04775:intron | 40.0% | |
| TTCTGAACAAACTACGCTGA+TGG | + | chr4.2:2000821-2000840 | None:intergenic | 40.0% | |
| TTCTGTGGAATCTCCGAATT+CGG | - | chr4.2:2000414-2000433 | MS.gene04775:intron | 40.0% | |
| TTGTTCGCCAAACCAAGTAT+AGG | - | chr4.2:2001631-2001650 | MS.gene04775:intron | 40.0% | |
| ! | AACCTTGATGGTTTCCACTT+TGG | + | chr4.2:2002374-2002393 | None:intergenic | 40.0% |
| ! | ACCTTGATGGTTTCCACTTT+GGG | + | chr4.2:2002373-2002392 | None:intergenic | 40.0% |
| ! | ATACATTGGCCTGATTGTGT+CGG | - | chr4.2:2000695-2000714 | MS.gene04775:CDS | 40.0% |
| ! | GCAGATAGATTGGTCATGTT+TGG | + | chr4.2:2002148-2002167 | None:intergenic | 40.0% |
| ! | TTCCAGTTGAGGTTCTAATG+AGG | - | chr4.2:1999511-1999530 | MS.gene04775:intron | 40.0% |
| ! | TTTTCATTACGCTGGTAAGC+TGG | + | chr4.2:2001473-2001492 | None:intergenic | 40.0% |
| !!! | GGTTTTGGAATTGGCTTATC+TGG | - | chr4.2:1999914-1999933 | MS.gene04775:intron | 40.0% |
| !!! | TTGGTTTTGAGTGGTAGGTA+AGG | - | chr4.2:1998860-1998879 | MS.gene04775:intron | 40.0% |
| AAACCCTTAGGAGCAGAAGT+GGG | - | chr4.2:2002431-2002450 | MS.gene04775:CDS | 45.0% | |
| ACCCAAAGTGGAAACCATCA+AGG | - | chr4.2:2002369-2002388 | MS.gene04775:intron | 45.0% | |
| AGGAACACACTATGTGCCAT+CGG | - | chr4.2:2000524-2000543 | MS.gene04775:CDS | 45.0% | |
| ATTCACTGCAGAACCCAAAG+TGG | - | chr4.2:2002357-2002376 | MS.gene04775:intron | 45.0% | |
| ATTCTCGATGACCGCTTACT+TGG | - | chr4.2:1999154-1999173 | MS.gene04775:CDS | 45.0% | |
| CCGCTATCGTATCATAACAG+AGG | - | chr4.2:1999943-1999962 | MS.gene04775:intron | 45.0% | |
| CTGCGACATGATTTCGTAGA+AGG | - | chr4.2:2001522-2001541 | MS.gene04775:intron | 45.0% | |
| GAAGCCGTCTTTAAACCCTT+AGG | - | chr4.2:2002419-2002438 | MS.gene04775:CDS | 45.0% | |
| GATCTCGGTTACCAAGTAAG+CGG | + | chr4.2:1999168-1999187 | None:intergenic | 45.0% | |
| GCATCTGCTTCTCTCATTAC+AGG | - | chr4.2:1999550-1999569 | MS.gene04775:CDS | 45.0% | |
| GGTGCTTATCTTGGATTGAC+TGG | - | chr4.2:2000459-2000478 | MS.gene04775:intron | 45.0% | |
| TAAACCCTTAGGAGCAGAAG+TGG | - | chr4.2:2002430-2002449 | MS.gene04775:CDS | 45.0% | |
| TATGTGCCATCGGGAAAGTT+AGG | - | chr4.2:2000534-2000553 | MS.gene04775:CDS | 45.0% | |
| TCAACTTCCTCCAACCTTGA+TGG | + | chr4.2:2002386-2002405 | None:intergenic | 45.0% | |
| TTTAACTGTGCCTCACTGTC+CGG | + | chr4.2:2000980-2000999 | None:intergenic | 45.0% | |
| ! | CTGGAAGTACATTCTAACCC+AGG | + | chr4.2:1999497-1999516 | None:intergenic | 45.0% |
| ! | GGAATTGGCTTATCTGGTCA+TGG | - | chr4.2:1999920-1999939 | MS.gene04775:intron | 45.0% |
| ! | TTCATGGCGTTGAGAGCTTT+GGG | + | chr4.2:1998250-1998269 | None:intergenic | 45.0% |
| ! | TTCATTCAAGGAGGCCCTTT+TGG | - | chr4.2:2000557-2000576 | MS.gene04775:intron | 45.0% |
| !! | ACTCTTGCTCGGTGTTAGTT+TGG | - | chr4.2:1999471-1999490 | MS.gene04775:intron | 45.0% |
| !! | ATTGGCTTGTTCCCAGATGT+AGG | - | chr4.2:2000106-2000125 | MS.gene04775:CDS | 45.0% |
| !! | GATGATGATGATGGCGAAAG+CGG | + | chr4.2:1999066-1999085 | None:intergenic | 45.0% |
| !! | AAAAAAATATATGTAAAATT+TGG | - | chr4.2:1998395-1998414 | MS.gene04775:intron | 5.0% |
| !! | AAAAAATATATGTAAAATTT+GGG | - | chr4.2:1998396-1998415 | MS.gene04775:intron | 5.0% |
| !! | AAAATTATAATATAATACAT+TGG | - | chr4.2:2000681-2000700 | MS.gene04775:intron | 5.0% |
| !!! | GTATTATATTATAATTTTAT+TGG | + | chr4.2:2000679-2000698 | None:intergenic | 5.0% |
| AAGACGGCTTCAACCTCACT+TGG | + | chr4.2:2002410-2002429 | None:intergenic | 50.0% | |
| AGGAAGTTCAGTGTCTCTGG+AGG | + | chr4.2:1999603-1999622 | None:intergenic | 50.0% | |
| AGGTGTCCGAGCAGTATTAG+TGG | - | chr4.2:2001542-2001561 | MS.gene04775:intron | 50.0% | |
| CATATAGCGGCTCAAAGTCC+AGG | - | chr4.2:2000136-2000155 | MS.gene04775:CDS | 50.0% | |
| CATTAGAGTCAGTGCTCGAC+TGG | + | chr4.2:2001081-2001100 | None:intergenic | 50.0% | |
| CTGACTGCAGGTGCTTATCT+TGG | - | chr4.2:2000450-2000469 | MS.gene04775:intron | 50.0% | |
| GCATTGCAAGAACAGTCCTC+TGG | + | chr4.2:2000075-2000094 | None:intergenic | 50.0% | |
| GGAACACACTATGTGCCATC+GGG | - | chr4.2:2000525-2000544 | MS.gene04775:CDS | 50.0% | |
| GGAGGAAGTTGAACCAAGTG+AGG | - | chr4.2:2002394-2002413 | MS.gene04775:CDS | 50.0% | |
| GGCCTCATTAGAACCTCAAC+TGG | + | chr4.2:1999516-1999535 | None:intergenic | 50.0% | |
| GTGAATTATCCACGGTGAGC+AGG | - | chr4.2:2001358-2001377 | MS.gene04775:intron | 50.0% | |
| GTGGAAACCATCAAGGTTGG+AGG | - | chr4.2:2002376-2002395 | MS.gene04775:CDS | 50.0% | |
| TAGTTCTCAGGATCCCCATC+AGG | - | chr4.2:2000919-2000938 | MS.gene04775:intron | 50.0% | |
| TGGGCTAATGAAGCTCTCCA+AGG | - | chr4.2:2001252-2001271 | MS.gene04775:intron | 50.0% | |
| TTAACTGTGCCTCACTGTCC+GGG | + | chr4.2:2000979-2000998 | None:intergenic | 50.0% | |
| TTACCAACAGCTCCTTCTCC+TGG | + | chr4.2:2000157-2000176 | None:intergenic | 50.0% | |
| TTTGCCTAGTGCAGAGGCAA+CGG | + | chr4.2:2001331-2001350 | None:intergenic | 50.0% | |
| ! | CTGAGTATCGCATTGCCTTG+AGG | - | chr4.2:2001493-2001512 | MS.gene04775:intron | 50.0% |
| ! | GTTCATGGCGTTGAGAGCTT+TGG | + | chr4.2:1998251-1998270 | None:intergenic | 50.0% |
| ! | TCATGGCGTTGAGAGCTTTG+GGG | + | chr4.2:1998249-1998268 | None:intergenic | 50.0% |
| !! | CAGTCGAGCACTGACTCTAA+TGG | - | chr4.2:2001079-2001098 | MS.gene04775:intron | 50.0% |
| !!! | AGAAGGGAGCACCTTTTGCA+AGG | + | chr4.2:2001278-2001297 | None:intergenic | 50.0% |
| !!! | GTCGTTTTTGCCTAGTGCAG+AGG | + | chr4.2:2001337-2001356 | None:intergenic | 50.0% |
| AGTCCAGGAGAAGGAGCTGT+TGG | - | chr4.2:2000151-2000170 | MS.gene04775:CDS | 55.0% | |
| ATGTCGCAGCGAAGACCTCA+AGG | + | chr4.2:2001511-2001530 | None:intergenic | 55.0% | |
| GAAAAGGAACCTGCTCACCG+TGG | + | chr4.2:2001370-2001389 | None:intergenic | 55.0% | |
| GCTCTCAACGCCATGAACCT+AGG | - | chr4.2:1998253-1998272 | MS.gene04775:CDS | 55.0% | |
| GCTCTCCAAGGCCTTGCAAA+AGG | - | chr4.2:2001264-2001283 | MS.gene04775:intron | 55.0% | |
| TCGCCCACTTCTGCTCCTAA+GGG | + | chr4.2:2002437-2002456 | None:intergenic | 55.0% | |
| TGAGTCAAACCCGGACAGTG+AGG | - | chr4.2:2000967-2000986 | MS.gene04775:intron | 55.0% | |
| ! | ATACCGGCACAAAAGGCACG+AGG | + | chr4.2:1998718-1998737 | None:intergenic | 55.0% |
| ! | GAGCACCTTTTGCAAGGCCT+TGG | + | chr4.2:2001272-2001291 | None:intergenic | 55.0% |
| ! | TACCGGCACAAAAGGCACGA+GGG | + | chr4.2:1998717-1998736 | None:intergenic | 55.0% |
| !! | GCTCGGTGTTAGTTTGGCCT+GGG | - | chr4.2:1999477-1999496 | MS.gene04775:intron | 55.0% |
| !! | TGCTCGGTGTTAGTTTGGCC+TGG | - | chr4.2:1999476-1999495 | MS.gene04775:intron | 55.0% |
| CTCGCCCACTTCTGCTCCTA+AGG | + | chr4.2:2002438-2002457 | None:intergenic | 60.0% | |
| GCGGCTCAAAGTCCAGGAGA+AGG | - | chr4.2:2000142-2000161 | MS.gene04775:CDS | 60.0% | |
| TCTGCCGTTGCCTCTGCACT+AGG | - | chr4.2:2001324-2001343 | MS.gene04775:intron | 60.0% | |
| ! | ACCGGCACAAAAGGCACGAG+GGG | + | chr4.2:1998716-1998735 | None:intergenic | 60.0% |
| ! | TCCCCTCGTGCCTTTTGTGC+CGG | - | chr4.2:1998712-1998731 | MS.gene04775:intron | 60.0% |
| !! | GAGAGCTTTGGGGCGATCGA+GGG | + | chr4.2:1998239-1998258 | None:intergenic | 60.0% |
| !! | TGAGAGCTTTGGGGCGATCG+AGG | + | chr4.2:1998240-1998259 | None:intergenic | 60.0% |
| GGGGCGATCGAGGGTGAGAA+GGG | + | chr4.2:1998230-1998249 | None:intergenic | 65.0% | |
| TGGGGCGATCGAGGGTGAGA+AGG | + | chr4.2:1998231-1998250 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 1998181 | 2002469 | 1998181 | ID=MS.gene04775 |
| chr4.2 | mRNA | 1998181 | 2002469 | 1998181 | ID=MS.gene04775.t1;Parent=MS.gene04775 |
| chr4.2 | exon | 2002376 | 2002469 | 2002376 | ID=MS.gene04775.t1.exon1;Parent=MS.gene04775.t1 |
| chr4.2 | CDS | 2002376 | 2002469 | 2002376 | ID=cds.MS.gene04775.t1;Parent=MS.gene04775.t1 |
| chr4.2 | exon | 2001917 | 2002018 | 2001917 | ID=MS.gene04775.t1.exon2;Parent=MS.gene04775.t1 |
| chr4.2 | CDS | 2001917 | 2002018 | 2001917 | ID=cds.MS.gene04775.t1;Parent=MS.gene04775.t1 |
| chr4.2 | exon | 2001672 | 2001736 | 2001672 | ID=MS.gene04775.t1.exon3;Parent=MS.gene04775.t1 |
| chr4.2 | CDS | 2001672 | 2001736 | 2001672 | ID=cds.MS.gene04775.t1;Parent=MS.gene04775.t1 |
| chr4.2 | exon | 2000686 | 2000820 | 2000686 | ID=MS.gene04775.t1.exon4;Parent=MS.gene04775.t1 |
| chr4.2 | CDS | 2000686 | 2000820 | 2000686 | ID=cds.MS.gene04775.t1;Parent=MS.gene04775.t1 |
| chr4.2 | exon | 2000478 | 2000574 | 2000478 | ID=MS.gene04775.t1.exon5;Parent=MS.gene04775.t1 |
| chr4.2 | CDS | 2000478 | 2000574 | 2000478 | ID=cds.MS.gene04775.t1;Parent=MS.gene04775.t1 |
| chr4.2 | exon | 2000061 | 2000190 | 2000061 | ID=MS.gene04775.t1.exon6;Parent=MS.gene04775.t1 |
| chr4.2 | CDS | 2000061 | 2000190 | 2000061 | ID=cds.MS.gene04775.t1;Parent=MS.gene04775.t1 |
| chr4.2 | exon | 1999550 | 1999728 | 1999550 | ID=MS.gene04775.t1.exon7;Parent=MS.gene04775.t1 |
| chr4.2 | CDS | 1999550 | 1999728 | 1999550 | ID=cds.MS.gene04775.t1;Parent=MS.gene04775.t1 |
| chr4.2 | exon | 1999279 | 1999406 | 1999279 | ID=MS.gene04775.t1.exon8;Parent=MS.gene04775.t1 |
| chr4.2 | CDS | 1999279 | 1999406 | 1999279 | ID=cds.MS.gene04775.t1;Parent=MS.gene04775.t1 |
| chr4.2 | exon | 1999075 | 1999176 | 1999075 | ID=MS.gene04775.t1.exon9;Parent=MS.gene04775.t1 |
| chr4.2 | CDS | 1999075 | 1999176 | 1999075 | ID=cds.MS.gene04775.t1;Parent=MS.gene04775.t1 |
| chr4.2 | exon | 1998181 | 1998282 | 1998181 | ID=MS.gene04775.t1.exon10;Parent=MS.gene04775.t1 |
| chr4.2 | CDS | 1998181 | 1998282 | 1998181 | ID=cds.MS.gene04775.t1;Parent=MS.gene04775.t1 |
| Gene Sequence |
| Protein sequence |
