Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49075.t1 | XP_013469685.1 | 96 | 959 | 34 | 1 | 1 | 959 | 118 | 1072 | 0.00E+00 | 1796.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49075.t1 | O65607 | 65.5 | 895 | 296 | 7 | 1 | 885 | 124 | 1015 | 0.0e+00 | 1127.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49075.t1 | A0A072VPI7 | 96.0 | 959 | 34 | 1 | 1 | 959 | 118 | 1072 | 0.0e+00 | 1796.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene04418 | MS.gene49075 | PPI |
MS.gene49075 | MS.gene28806 | PPI |
MS.gene49075 | MS.gene050408 | PPI |
MS.gene05640 | MS.gene49075 | PPI |
MS.gene07047 | MS.gene49075 | PPI |
MS.gene49075 | MS.gene072703 | PPI |
MS.gene04079 | MS.gene49075 | PPI |
MS.gene49075 | MS.gene013296 | PPI |
MS.gene08109 | MS.gene49075 | PPI |
MS.gene49075 | MS.gene40912 | PPI |
MS.gene049266 | MS.gene49075 | PPI |
MS.gene06380 | MS.gene49075 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49075.t1 | MTR_1g100683 | 96.976 | 959 | 25 | 1 | 1 | 959 | 118 | 1072 | 0.0 | 1919 |
MS.gene49075.t1 | MTR_1g100683 | 96.976 | 959 | 25 | 1 | 1 | 959 | 118 | 1072 | 0.0 | 1919 |
MS.gene49075.t1 | MTR_7g109470 | 28.967 | 939 | 535 | 28 | 1 | 880 | 356 | 1221 | 4.50e-75 | 270 |
MS.gene49075.t1 | MTR_4g111945 | 29.213 | 623 | 368 | 21 | 283 | 879 | 286 | 861 | 2.40e-57 | 214 |
MS.gene49075.t1 | MTR_5g093110 | 26.560 | 625 | 371 | 21 | 289 | 874 | 182 | 757 | 1.22e-43 | 171 |
MS.gene49075.t1 | MTR_6g086270 | 37.818 | 275 | 150 | 7 | 613 | 871 | 816 | 1085 | 1.03e-40 | 163 |
MS.gene49075.t1 | MTR_6g086270 | 27.103 | 321 | 194 | 12 | 46 | 360 | 388 | 674 | 1.25e-12 | 72.8 |
MS.gene49075.t1 | MTR_1g045670 | 32.632 | 190 | 116 | 3 | 682 | 871 | 766 | 943 | 1.21e-16 | 85.9 |
MS.gene49075.t1 | MTR_5g068600 | 28.194 | 227 | 130 | 5 | 682 | 904 | 432 | 629 | 2.70e-16 | 84.3 |
MS.gene49075.t1 | MTR_5g068600 | 28.049 | 246 | 143 | 6 | 663 | 904 | 314 | 529 | 3.02e-16 | 84.0 |
MS.gene49075.t1 | MTR_4g088920 | 33.071 | 127 | 83 | 2 | 682 | 807 | 428 | 553 | 1.99e-15 | 81.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49075.t1 | AT4G25540 | 62.073 | 965 | 336 | 11 | 1 | 953 | 124 | 1070 | 0.0 | 1176 |
MS.gene49075.t1 | AT4G02070 | 28.844 | 943 | 566 | 31 | 1 | 894 | 396 | 1282 | 1.47e-75 | 271 |
MS.gene49075.t1 | AT4G02070 | 28.844 | 943 | 566 | 31 | 1 | 894 | 399 | 1285 | 1.50e-75 | 271 |
MS.gene49075.t1 | AT3G18524 | 28.173 | 646 | 403 | 20 | 292 | 915 | 294 | 900 | 1.71e-58 | 218 |
MS.gene49075.t1 | AT3G20475 | 27.460 | 630 | 371 | 26 | 289 | 880 | 180 | 761 | 4.33e-43 | 169 |
MS.gene49075.t1 | AT4G17380 | 26.677 | 626 | 393 | 20 | 292 | 892 | 165 | 749 | 3.11e-41 | 163 |
MS.gene49075.t1 | AT3G24495 | 35.517 | 290 | 164 | 8 | 602 | 871 | 752 | 1038 | 3.07e-40 | 161 |
MS.gene49075.t1 | AT3G24495 | 25.067 | 375 | 231 | 12 | 1 | 361 | 287 | 625 | 1.19e-13 | 76.3 |
MS.gene49075.t1 | AT3G20475 | 27.815 | 604 | 350 | 27 | 289 | 854 | 180 | 735 | 7.20e-39 | 156 |
MS.gene49075.t1 | AT4G17380 | 27.156 | 545 | 343 | 16 | 292 | 812 | 165 | 679 | 4.75e-38 | 153 |
MS.gene49075.t1 | AT3G20475 | 27.273 | 616 | 352 | 27 | 289 | 861 | 180 | 742 | 1.33e-37 | 152 |
MS.gene49075.t1 | AT5G54090 | 30.252 | 238 | 139 | 5 | 682 | 908 | 438 | 659 | 7.70e-19 | 92.4 |
MS.gene49075.t1 | AT3G24320 | 32.850 | 207 | 125 | 4 | 667 | 871 | 503 | 697 | 6.93e-18 | 89.7 |
MS.gene49075.t1 | AT3G24320 | 32.850 | 207 | 125 | 4 | 667 | 871 | 748 | 942 | 9.19e-18 | 89.4 |
MS.gene49075.t1 | AT1G65070 | 31.250 | 160 | 104 | 4 | 667 | 822 | 385 | 542 | 7.99e-14 | 76.3 |
MS.gene49075.t1 | AT1G65070 | 29.570 | 186 | 118 | 5 | 648 | 822 | 359 | 542 | 9.73e-14 | 76.3 |
MS.gene49075.t1 | AT1G65070 | 29.570 | 186 | 118 | 5 | 648 | 822 | 359 | 542 | 1.02e-13 | 76.3 |
MS.gene49075.t1 | AT1G65070 | 29.570 | 186 | 118 | 5 | 648 | 822 | 359 | 542 | 1.26e-13 | 75.9 |
MS.gene49075.t1 | AT3G24495 | 25.067 | 375 | 231 | 12 | 1 | 361 | 287 | 625 | 1.94e-13 | 75.1 |
Find 196 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATGTAAAAGTGCCTTTAAAT+TGG | 0.154160 | 1.3:+69570177 | MS.gene49075:CDS |
AATCACACTCTTACTATATT+TGG | 0.156585 | 1.3:+69567866 | MS.gene49075:CDS |
TTTACTTTAACCCAATTTAA+AGG | 0.163743 | 1.3:-69570188 | None:intergenic |
TCTCCTGCTGAGTTGCTTCT+TGG | 0.182974 | 1.3:+69563051 | MS.gene49075:CDS |
TTGGAATATATGTGTGTTTC+TGG | 0.185265 | 1.3:+69569553 | MS.gene49075:CDS |
TCGACGGGAGATGTTGTTTA+TGG | 0.202150 | 1.3:+69562973 | MS.gene49075:CDS |
GTTTACTAGTGCTTCTAATT+TGG | 0.208298 | 1.3:-69572119 | None:intergenic |
TGCCATTCTTTCAAGAAATA+AGG | 0.210957 | 1.3:+69570406 | MS.gene49075:CDS |
ACGGCTCGGAATGCGGAAAT+TGG | 0.216042 | 1.3:+69569534 | MS.gene49075:CDS |
GCATGCTCTACAAGTGTTAT+TGG | 0.222801 | 1.3:+69568679 | MS.gene49075:CDS |
GCTTGAGGCGGCGCATGATA+TGG | 0.233393 | 1.3:+69562810 | MS.gene49075:CDS |
TGTTGTGGAGAAGAGTATTT+TGG | 0.257117 | 1.3:+69562879 | MS.gene49075:CDS |
CACTGTCCGCATCAAGAATT+TGG | 0.274491 | 1.3:+69572214 | MS.gene49075:CDS |
TGAGAATGCTGCTAGGGTTT+TGG | 0.275182 | 1.3:+69562585 | MS.gene49075:CDS |
GTTTCCAGGCTAGCAATCTT+TGG | 0.287281 | 1.3:-69571352 | None:intergenic |
GATCTATTATTAGTTATTAC+TGG | 0.290771 | 1.3:+69564763 | MS.gene49075:intron |
GATTGTCACTGGACCCAATA+TGG | 0.295792 | 1.3:+69570756 | MS.gene49075:CDS |
GCGTGCATGCTTGTATCATT+TGG | 0.302157 | 1.3:-69570715 | None:intergenic |
CCTGACAAACCTCGACAAAA+TGG | 0.311412 | 1.3:-69562769 | None:intergenic |
AAGTCTCGCTCAATTCTTCT+AGG | 0.316427 | 1.3:-69571174 | None:intergenic |
CTCTTACTATATTTGGTTCC+AGG | 0.318033 | 1.3:+69567873 | MS.gene49075:CDS |
GTATATCAGGTGCCCGGCCC+AGG | 0.325648 | 1.3:-69568205 | None:intergenic |
AGCCTGGAAATTCAGTTTCC+AGG | 0.335870 | 1.3:-69571366 | None:intergenic |
TTGGATAATGAGTGACAAAT+AGG | 0.337443 | 1.3:-69571333 | None:intergenic |
TCTTGCTCTTGATCAATAAC+AGG | 0.342654 | 1.3:-69572184 | None:intergenic |
CTTGAGGCGGCGCATGATAT+GGG | 0.347667 | 1.3:+69562811 | MS.gene49075:CDS |
GTAATCCCACGCTGTATATC+AGG | 0.349821 | 1.3:-69568218 | None:intergenic |
GGTGTTTCTGAGAGAAGTTT+TGG | 0.350688 | 1.3:+69571490 | MS.gene49075:CDS |
TCCAATGCTGTCACTACTTC+AGG | 0.352461 | 1.3:-69570242 | None:intergenic |
CGTGCATGCTTGTATCATTT+GGG | 0.357137 | 1.3:-69570714 | None:intergenic |
GTTCCAGGCTTCTTAAACAT+TGG | 0.360925 | 1.3:+69567888 | MS.gene49075:CDS |
AACCTTATTTCTTGAAAGAA+TGG | 0.366750 | 1.3:-69570408 | None:intergenic |
GTTCAGATGCAAATTTGTTC+TGG | 0.369966 | 1.3:+69570538 | MS.gene49075:CDS |
TGAGTTGGCTGTCGAAGCTT+TGG | 0.374349 | 1.3:+69566853 | MS.gene49075:CDS |
TGTAAAAGTGCCTTTAAATT+GGG | 0.375046 | 1.3:+69570178 | MS.gene49075:CDS |
TACTGTCAGAAGCGCCCATC+CGG | 0.387453 | 1.3:-69571129 | None:intergenic |
TCCGCATTCCGAGCCGTTTG+CGG | 0.388107 | 1.3:-69569528 | None:intergenic |
GAAGAATCTTGGACGCTTTG+AGG | 0.394660 | 1.3:+69568118 | MS.gene49075:CDS |
TTCTGTGCTCAGGTGCTTTG+AGG | 0.396657 | 1.3:+69566918 | MS.gene49075:CDS |
AGCTAATACACTTCAACAAC+TGG | 0.403145 | 1.3:+69566973 | MS.gene49075:CDS |
TTATCCAAAGATTGCTAGCC+TGG | 0.407892 | 1.3:+69571348 | MS.gene49075:CDS |
GTTAGCGCACATACTTTCAT+TGG | 0.412002 | 1.3:+69568172 | MS.gene49075:CDS |
ACTCTGCTTGCCAAGGAGAT+TGG | 0.413169 | 1.3:+69568737 | MS.gene49075:CDS |
AACAATGAATTGACTGAGCT+TGG | 0.417774 | 1.3:+69564917 | MS.gene49075:CDS |
CTTCAAATGGCGAATAGTTA+AGG | 0.418426 | 1.3:-69566876 | None:intergenic |
TGTAATGGTATGAAGAATCT+TGG | 0.419362 | 1.3:+69568107 | MS.gene49075:CDS |
TTCCAGGCTTCTTAAACATT+GGG | 0.420803 | 1.3:+69567889 | MS.gene49075:CDS |
ATTCGCCATTTGAAGGGATT+CGG | 0.423556 | 1.3:+69566884 | MS.gene49075:CDS |
AGTGACATCTTCATGATCAT+TGG | 0.425696 | 1.3:-69571446 | None:intergenic |
CTGGTTATACTTGATGAGCT+TGG | 0.425757 | 1.3:+69571229 | MS.gene49075:CDS |
CTTAACTATTCGCCATTTGA+AGG | 0.425842 | 1.3:+69566877 | MS.gene49075:CDS |
TTAAGTCCCATGGTTTGAAT+CGG | 0.432685 | 1.3:+69562740 | MS.gene49075:CDS |
TGGGACAAAATTATTCTGTA+AGG | 0.433808 | 1.3:-69570695 | None:intergenic |
CTGTTGCCTGCCGAGCTGCA+TGG | 0.436855 | 1.3:+69570294 | MS.gene49075:CDS |
TGAAAGTATGTGCGCTAACT+CGG | 0.437377 | 1.3:-69568168 | None:intergenic |
GATGTGAGGATTGGGATTGT+TGG | 0.441507 | 1.3:+69562940 | MS.gene49075:CDS |
AGCCTGGAAACTGAATTTCC+AGG | 0.441723 | 1.3:+69571364 | MS.gene49075:CDS |
TGGTTATACTTGATGAGCTT+GGG | 0.443899 | 1.3:+69571230 | MS.gene49075:CDS |
AGCAGAATACATGGTAGATC+AGG | 0.445656 | 1.3:+69572142 | MS.gene49075:CDS |
GAACAAATTTGCATCTGAAC+AGG | 0.446299 | 1.3:-69570535 | None:intergenic |
TGATATGCTGCTACAGAGCC+TGG | 0.451470 | 1.3:-69571382 | None:intergenic |
TGGACATTTAATCGAAAAGT+TGG | 0.456102 | 1.3:-69562652 | None:intergenic |
AAACTATTTCTCACCTCAGA+TGG | 0.458381 | 1.3:-69568266 | None:intergenic |
TGATTGACTTGTACCGCAAA+CGG | 0.460262 | 1.3:+69569515 | MS.gene49075:CDS |
ACGCTCCACACGAGCATTTG+AGG | 0.461836 | 1.3:-69564801 | None:intergenic |
GTTATCCCATGCAGCTCGGC+AGG | 0.468651 | 1.3:-69570300 | None:intergenic |
TAATTATTTGTTGTGTGTTG+TGG | 0.471022 | 1.3:+69562864 | MS.gene49075:CDS |
TACCCAATGTTTAAGAAGCC+TGG | 0.471739 | 1.3:-69567891 | None:intergenic |
GTGAGGAGGCTTGTCAGTGC+AGG | 0.472677 | 1.3:+69562676 | MS.gene49075:CDS |
TTTGAAAGAATTCTGTGCTC+AGG | 0.473475 | 1.3:+69566908 | MS.gene49075:CDS |
CAAAACCGAATCCCTTCAAA+TGG | 0.478795 | 1.3:-69566889 | None:intergenic |
GACTTGTACCGCAAACGGCT+CGG | 0.482281 | 1.3:+69569520 | MS.gene49075:CDS |
ATCTGAAATCGCAGAGTCCA+TGG | 0.488575 | 1.3:+69568079 | MS.gene49075:CDS |
TAAGTCCCATGGTTTGAATC+GGG | 0.490341 | 1.3:+69562741 | MS.gene49075:CDS |
ATCAGCAAAACTGCATGTCC+TGG | 0.492985 | 1.3:+69571093 | MS.gene49075:CDS |
TGGTGTAACTCACTTGATAG+AGG | 0.496881 | 1.3:+69569573 | MS.gene49075:CDS |
GTGAATTTACCTGTGCAAGC+TGG | 0.497088 | 1.3:-69571525 | None:intergenic |
AACTATTTCTCACCTCAGAT+GGG | 0.502885 | 1.3:-69568265 | None:intergenic |
ATTGTCACTGGACCCAATAT+GGG | 0.503569 | 1.3:+69570757 | MS.gene49075:CDS |
TAGATGTACAGAACGTTCAC+TGG | 0.510813 | 1.3:+69571210 | MS.gene49075:CDS |
TGTTGCCTGCCGAGCTGCAT+GGG | 0.510976 | 1.3:+69570295 | MS.gene49075:CDS |
TTGAGGCGGCGCATGATATG+GGG | 0.511532 | 1.3:+69562812 | MS.gene49075:CDS |
ACACAACAAATAATTATTCA+CGG | 0.511670 | 1.3:-69562857 | None:intergenic |
CACTGACAAGCCTCCTCACA+TGG | 0.514857 | 1.3:-69562672 | None:intergenic |
CACGCTGTATATCAGGTGCC+CGG | 0.515705 | 1.3:-69568211 | None:intergenic |
TCATATTTGTCCAATCTCCT+TGG | 0.516334 | 1.3:-69568747 | None:intergenic |
CTAGTGCTTGAACAGAAGCT+TGG | 0.516722 | 1.3:-69570358 | None:intergenic |
TCGCAAAGACATTAGTTAGC+AGG | 0.516902 | 1.3:+69572347 | MS.gene49075:CDS |
TCTGATCGCTCTCATGGCTC+AGG | 0.523504 | 1.3:+69570810 | MS.gene49075:CDS |
ATTAAGACGAGCAGCAATCA+AGG | 0.523706 | 1.3:-69568051 | None:intergenic |
TGAATTTACCTGTGCAAGCT+GGG | 0.527013 | 1.3:-69571524 | None:intergenic |
CAAAACTGCATGTCCTGGAC+GGG | 0.528188 | 1.3:+69571098 | MS.gene49075:CDS |
TAAGGTTGCCCAGCTTGCAC+AGG | 0.528331 | 1.3:+69571516 | MS.gene49075:CDS |
GAGTCCATGGGAACTTGTAA+TGG | 0.530308 | 1.3:+69568092 | MS.gene49075:CDS |
TTTGGGTATTTATGCTCACA+TGG | 0.530710 | 1.3:+69562603 | MS.gene49075:CDS |
GTCAGTGCAGGGTATAAAGT+TGG | 0.531280 | 1.3:+69562688 | MS.gene49075:CDS |
TCAAGGTTTGATCACACAAT+GGG | 0.532861 | 1.3:-69568034 | None:intergenic |
TCTCCAAGAAGCAACTCAGC+AGG | 0.533436 | 1.3:-69563054 | None:intergenic |
CTAGTAAACAGCAGAATACA+TGG | 0.536333 | 1.3:+69572133 | MS.gene49075:CDS |
CTTCGACAGCCAACTCAGGC+AGG | 0.536386 | 1.3:-69566847 | None:intergenic |
TCCCATGGTTTGAATCGGGC+CGG | 0.538865 | 1.3:+69562745 | MS.gene49075:CDS |
ATACTTGATGAGCTTGGGAG+AGG | 0.542558 | 1.3:+69571235 | MS.gene49075:CDS |
GAAAGTATGTGCGCTAACTC+GGG | 0.542970 | 1.3:-69568167 | None:intergenic |
TTGAATTATGGTGTGGAAGG+TGG | 0.544265 | 1.3:+69562913 | MS.gene49075:CDS |
ATAGCACAAAGAAAACAATT+CGG | 0.544679 | 1.3:+69570210 | MS.gene49075:CDS |
TGAGGCGGCGCATGATATGG+GGG | 0.545773 | 1.3:+69562813 | MS.gene49075:CDS |
AAAGAATGGCAAGTGAATGC+AGG | 0.546419 | 1.3:-69570394 | None:intergenic |
GAGTACTGTCAGATTGTCAC+TGG | 0.546918 | 1.3:+69570745 | MS.gene49075:CDS |
GGACGGGATTTACACCCGGA+TGG | 0.546986 | 1.3:+69571114 | MS.gene49075:CDS |
TCCGGGTGTAAATCCCGTCC+AGG | 0.547902 | 1.3:-69571111 | None:intergenic |
AGTATCTCTGATCGCTCTCA+TGG | 0.548767 | 1.3:+69570804 | MS.gene49075:CDS |
TATATCAGGTGCCCGGCCCA+GGG | 0.549217 | 1.3:-69568204 | None:intergenic |
TGCTGATGATGCTGGTACAA+AGG | 0.549322 | 1.3:-69571077 | None:intergenic |
GACGGGATTTACACCCGGAT+GGG | 0.551654 | 1.3:+69571115 | MS.gene49075:CDS |
TACGAAGGCCACGCTTGAGG+CGG | 0.553669 | 1.3:+69562798 | MS.gene49075:CDS |
GACCGGCCCGATTCAAACCA+TGG | 0.555950 | 1.3:-69562747 | None:intergenic |
TTAACTATTCGCCATTTGAA+GGG | 0.556174 | 1.3:+69566878 | MS.gene49075:CDS |
TGAGAGCGATCAGAGATACT+TGG | 0.556186 | 1.3:-69570801 | None:intergenic |
CTCGCTCAATTCTTCTAGGA+AGG | 0.557105 | 1.3:-69571170 | None:intergenic |
ATCATGCGCCGCCTCAAGCG+TGG | 0.557718 | 1.3:-69562806 | None:intergenic |
CTGCATGGGATAACTTTCTG+AGG | 0.559444 | 1.3:+69570309 | MS.gene49075:CDS |
GGTGATGAACCTGCCTGAGT+TGG | 0.560257 | 1.3:+69566838 | MS.gene49075:CDS |
TCTGAAGCAGAAGAAAAGCT+TGG | 0.568542 | 1.3:+69571309 | MS.gene49075:CDS |
TACAAGTACGCATGATGGCA+TGG | 0.572756 | 1.3:+69571258 | MS.gene49075:CDS |
TTCGATTAAATGTCCATGTG+AGG | 0.574732 | 1.3:+69562659 | MS.gene49075:CDS |
TTCAGCAAAAGCGCCTCCGT+TGG | 0.576824 | 1.3:-69564843 | None:intergenic |
GAGGATTGGGATTGTTGGTG+TGG | 0.577876 | 1.3:+69562945 | MS.gene49075:CDS |
CGGCTTCAGCAACTTAACAT+AGG | 0.578965 | 1.3:+69568592 | MS.gene49075:CDS |
GTTGGTGTGGAGATATCGAC+GGG | 0.579122 | 1.3:+69562958 | MS.gene49075:CDS |
ATTTCTGTATTGCTTACGAA+GGG | 0.580218 | 1.3:-69566941 | None:intergenic |
ATAGGTAACTACAGCTCGAA+AGG | 0.580422 | 1.3:+69569459 | MS.gene49075:intron |
ACCGCAAACGGCTCGGAATG+CGG | 0.582344 | 1.3:+69569527 | MS.gene49075:CDS |
AAGATGCTGAGAATGCTGCT+AGG | 0.582576 | 1.3:+69562578 | MS.gene49075:CDS |
GCAAAACTGCATGTCCTGGA+CGG | 0.584058 | 1.3:+69571097 | MS.gene49075:CDS |
CAGATGGGGTAGCAGTGCGA+TGG | 0.584605 | 1.3:-69568250 | None:intergenic |
AATGAAGACTCTGCTTGCCA+AGG | 0.585602 | 1.3:+69568730 | MS.gene49075:CDS |
ACCCTCCTCAAATGCTCGTG+TGG | 0.586421 | 1.3:+69564796 | MS.gene49075:CDS |
TCCTGAAGTAGTGACAGCAT+TGG | 0.587314 | 1.3:+69570241 | MS.gene49075:CDS |
AGATGCTGAGAATGCTGCTA+GGG | 0.587696 | 1.3:+69562579 | MS.gene49075:CDS |
GATTAAATGTCCATGTGAGG+AGG | 0.587869 | 1.3:+69562662 | MS.gene49075:CDS |
TCCTGGACGGGATTTACACC+CGG | 0.588888 | 1.3:+69571110 | MS.gene49075:CDS |
AAAGCTTCGACAGCCAACTC+AGG | 0.592282 | 1.3:-69566851 | None:intergenic |
ACCGGCCCGATTCAAACCAT+GGG | 0.592594 | 1.3:-69562746 | None:intergenic |
ACTGCTGCTATTAAGTCCCA+TGG | 0.594444 | 1.3:+69562730 | MS.gene49075:CDS |
CATTAGCCGAGCTATTGTCA+TGG | 0.594677 | 1.3:+69572093 | MS.gene49075:CDS |
ACTGTCAGAAGCGCCCATCC+GGG | 0.595251 | 1.3:-69571128 | None:intergenic |
TCTGAAATCGCAGAGTCCAT+GGG | 0.597436 | 1.3:+69568080 | MS.gene49075:CDS |
CATACCATTACAAGTTCCCA+TGG | 0.599441 | 1.3:-69568096 | None:intergenic |
TTGTCACTGGACCCAATATG+GGG | 0.599824 | 1.3:+69570758 | MS.gene49075:CDS |
AATCTGACAGTACTCTCTAT+CGG | 0.600944 | 1.3:-69570737 | None:intergenic |
CATTTCTGTATTGCTTACGA+AGG | 0.606746 | 1.3:-69566942 | None:intergenic |
AGATAAAATAGCTTGAACAA+TGG | 0.606851 | 1.3:-69568560 | None:intergenic |
TGAGGAGGCTTGTCAGTGCA+GGG | 0.607620 | 1.3:+69562677 | MS.gene49075:CDS |
GAAAGTTATCCCATGCAGCT+CGG | 0.610699 | 1.3:-69570304 | None:intergenic |
CAAACCTCGACAAAATGGAC+CGG | 0.614082 | 1.3:-69562764 | None:intergenic |
CAAATTCTTGATGCGGACAG+TGG | 0.615135 | 1.3:-69572213 | None:intergenic |
TGGAAGCCATGACAATAGCT+CGG | 0.615635 | 1.3:-69572099 | None:intergenic |
GTATACGAAGGCCACGCTTG+AGG | 0.615784 | 1.3:+69562795 | MS.gene49075:CDS |
TATCTATATAAACTCGTACC+TGG | 0.617343 | 1.3:+69571469 | MS.gene49075:CDS |
AGAGGTACAAGTACGCATGA+TGG | 0.618922 | 1.3:+69571253 | MS.gene49075:CDS |
AAATTGAATTATGGTGTGGA+AGG | 0.618948 | 1.3:+69562910 | MS.gene49075:CDS |
AACTGAGGAGCAATTTCCAG+AGG | 0.619772 | 1.3:+69568777 | MS.gene49075:CDS |
TTTACTCGCATCATCGTGTG+AGG | 0.620272 | 1.3:-69571419 | None:intergenic |
ATCAAGGTTTGATCACACAA+TGG | 0.623420 | 1.3:-69568035 | None:intergenic |
CAGCAACTTAACATAGGAGA+GGG | 0.625229 | 1.3:+69568598 | MS.gene49075:CDS |
TCGCACTGCTACCCCATCTG+AGG | 0.626360 | 1.3:+69568253 | MS.gene49075:CDS |
TCACGAGATTGCTTCACCAA+CGG | 0.627672 | 1.3:+69564827 | MS.gene49075:CDS |
AAGTCAGCAGATGGTAGTGA+AGG | 0.628549 | 1.3:+69564940 | MS.gene49075:CDS |
AATGCTGTCACTACTTCAGG+AGG | 0.628596 | 1.3:-69570239 | None:intergenic |
TCTTTCAAAACAAACTGAGA+AGG | 0.632424 | 1.3:+69563080 | MS.gene49075:CDS |
TGCATGGGATAACTTTCTGA+GGG | 0.633306 | 1.3:+69570310 | MS.gene49075:CDS |
TGTTGGTGTGGAGATATCGA+CGG | 0.633351 | 1.3:+69562957 | MS.gene49075:CDS |
GGGGAGGGGAAGATGAGTGT+GGG | 0.633547 | 1.3:+69562833 | MS.gene49075:CDS |
GCTCGGCTAATGCAATGTGA+TGG | 0.638140 | 1.3:-69572082 | None:intergenic |
TAATACACTTCAACAACTGG+AGG | 0.638267 | 1.3:+69566976 | MS.gene49075:CDS |
TGAGCTTGGAAGTCAGCAGA+TGG | 0.640911 | 1.3:+69564931 | MS.gene49075:CDS |
GAGGCGGCGCATGATATGGG+GGG | 0.647351 | 1.3:+69562814 | MS.gene49075:CDS |
AACAGTGATGGATCTGCGAG+TGG | 0.647470 | 1.3:+69567824 | MS.gene49075:CDS |
TTTGTCAGGGTTGTATACGA+AGG | 0.649142 | 1.3:+69562783 | MS.gene49075:CDS |
GCTTCTGACAGTATTCAGCA+AGG | 0.649318 | 1.3:+69571139 | MS.gene49075:CDS |
ACTATTTCTCACCTCAGATG+GGG | 0.651307 | 1.3:-69568264 | None:intergenic |
CTCCACACGAGCATTTGAGG+AGG | 0.652649 | 1.3:-69564798 | None:intergenic |
CTTCTGACAGTATTCAGCAA+GGG | 0.653317 | 1.3:+69571140 | MS.gene49075:CDS |
GCTCTACCAAATTCTTGATG+CGG | 0.657214 | 1.3:-69572220 | None:intergenic |
AAATATGATCATTGCAACTG+AGG | 0.660596 | 1.3:+69568762 | MS.gene49075:CDS |
GTGATTCATAACTTGCAGCA+AGG | 0.661421 | 1.3:-69567849 | None:intergenic |
TCCACACGAGCATTTGAGGA+GGG | 0.663274 | 1.3:-69564797 | None:intergenic |
TCAGCAACTTAACATAGGAG+AGG | 0.666505 | 1.3:+69568597 | MS.gene49075:CDS |
CGGGCACCTGATATACAGCG+TGG | 0.670207 | 1.3:+69568212 | MS.gene49075:CDS |
GTCACTGGACCCAATATGGG+GGG | 0.673063 | 1.3:+69570760 | MS.gene49075:CDS |
GGGCACCTGATATACAGCGT+GGG | 0.676024 | 1.3:+69568213 | MS.gene49075:CDS |
ATGCTGTCACTACTTCAGGA+GGG | 0.678638 | 1.3:-69570238 | None:intergenic |
TGTCACTGGACCCAATATGG+GGG | 0.681502 | 1.3:+69570759 | MS.gene49075:CDS |
GTTGGTGAAGCAATCTCGTG+AGG | 0.685113 | 1.3:-69564825 | None:intergenic |
CGAGATTGCTTCACCAACGG+AGG | 0.686562 | 1.3:+69564830 | MS.gene49075:CDS |
AAACTTCTCTCAGAAACACC+AGG | 0.690326 | 1.3:-69571487 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 69562541 | 69572372 | 69562541 | ID=MS.gene49075 |
chr1.3 | mRNA | 69562541 | 69572372 | 69562541 | ID=MS.gene49075.t1;Parent=MS.gene49075 |
chr1.3 | exon | 69562541 | 69563101 | 69562541 | ID=MS.gene49075.t1.exon1;Parent=MS.gene49075.t1 |
chr1.3 | CDS | 69562541 | 69563101 | 69562541 | ID=cds.MS.gene49075.t1;Parent=MS.gene49075.t1 |
chr1.3 | exon | 69564776 | 69564961 | 69564776 | ID=MS.gene49075.t1.exon2;Parent=MS.gene49075.t1 |
chr1.3 | CDS | 69564776 | 69564961 | 69564776 | ID=cds.MS.gene49075.t1;Parent=MS.gene49075.t1 |
chr1.3 | exon | 69566836 | 69566997 | 69566836 | ID=MS.gene49075.t1.exon3;Parent=MS.gene49075.t1 |
chr1.3 | CDS | 69566836 | 69566997 | 69566836 | ID=cds.MS.gene49075.t1;Parent=MS.gene49075.t1 |
chr1.3 | exon | 69567812 | 69567910 | 69567812 | ID=MS.gene49075.t1.exon4;Parent=MS.gene49075.t1 |
chr1.3 | CDS | 69567812 | 69567910 | 69567812 | ID=cds.MS.gene49075.t1;Parent=MS.gene49075.t1 |
chr1.3 | exon | 69568026 | 69568274 | 69568026 | ID=MS.gene49075.t1.exon5;Parent=MS.gene49075.t1 |
chr1.3 | CDS | 69568026 | 69568274 | 69568026 | ID=cds.MS.gene49075.t1;Parent=MS.gene49075.t1 |
chr1.3 | exon | 69568553 | 69568798 | 69568553 | ID=MS.gene49075.t1.exon6;Parent=MS.gene49075.t1 |
chr1.3 | CDS | 69568553 | 69568798 | 69568553 | ID=cds.MS.gene49075.t1;Parent=MS.gene49075.t1 |
chr1.3 | exon | 69569463 | 69569594 | 69569463 | ID=MS.gene49075.t1.exon7;Parent=MS.gene49075.t1 |
chr1.3 | CDS | 69569463 | 69569594 | 69569463 | ID=cds.MS.gene49075.t1;Parent=MS.gene49075.t1 |
chr1.3 | exon | 69570167 | 69570427 | 69570167 | ID=MS.gene49075.t1.exon8;Parent=MS.gene49075.t1 |
chr1.3 | CDS | 69570167 | 69570427 | 69570167 | ID=cds.MS.gene49075.t1;Parent=MS.gene49075.t1 |
chr1.3 | exon | 69570499 | 69570570 | 69570499 | ID=MS.gene49075.t1.exon9;Parent=MS.gene49075.t1 |
chr1.3 | CDS | 69570499 | 69570570 | 69570499 | ID=cds.MS.gene49075.t1;Parent=MS.gene49075.t1 |
chr1.3 | exon | 69570682 | 69570831 | 69570682 | ID=MS.gene49075.t1.exon10;Parent=MS.gene49075.t1 |
chr1.3 | CDS | 69570682 | 69570831 | 69570682 | ID=cds.MS.gene49075.t1;Parent=MS.gene49075.t1 |
chr1.3 | exon | 69571070 | 69571537 | 69571070 | ID=MS.gene49075.t1.exon11;Parent=MS.gene49075.t1 |
chr1.3 | CDS | 69571070 | 69571537 | 69571070 | ID=cds.MS.gene49075.t1;Parent=MS.gene49075.t1 |
chr1.3 | exon | 69572079 | 69572372 | 69572079 | ID=MS.gene49075.t1.exon12;Parent=MS.gene49075.t1 |
chr1.3 | CDS | 69572079 | 69572372 | 69572079 | ID=cds.MS.gene49075.t1;Parent=MS.gene49075.t1 |
Gene Sequence |
Protein sequence |