AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene28806


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene28806.t1 MTR_7g109470 92.641 1291 30 5 4 1242 3 1280 0.0 2425
MS.gene28806.t1 MTR_1g100683 28.497 958 547 28 299 1180 102 997 1.16e-77 279
MS.gene28806.t1 MTR_1g100683 28.497 958 547 28 299 1180 102 997 1.16e-77 279
MS.gene28806.t1 MTR_6g086270 44.411 331 168 7 892 1208 797 1125 1.81e-71 261
MS.gene28806.t1 MTR_6g086270 35.471 499 280 15 254 745 279 742 3.24e-67 248
MS.gene28806.t1 MTR_4g111945 28.805 611 359 21 602 1179 294 861 6.19e-50 192
MS.gene28806.t1 MTR_5g093110 25.201 623 361 24 602 1171 184 754 3.60e-34 142
MS.gene28806.t1 MTR_1g045670 34.234 222 133 3 982 1196 760 975 4.17e-26 117
MS.gene28806.t1 MTR_5g068600 29.389 262 150 9 972 1230 318 547 3.98e-17 87.4
MS.gene28806.t1 MTR_5g068600 29.389 262 150 9 972 1230 418 647 5.30e-17 87.0
MS.gene28806.t1 MTR_4g088920 27.830 212 141 6 962 1171 403 604 5.22e-15 80.9
MS.gene28806.t1 MTR_1g014270 47.368 57 30 0 98 154 644 700 2.05e-11 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene28806.t1 AT4G02070 66.766 1008 323 4 188 1184 270 1276 0.0 1386
MS.gene28806.t1 AT4G02070 39.151 212 88 6 4 183 5 207 3.23e-31 134
MS.gene28806.t1 AT4G02070 66.468 1008 323 5 188 1184 270 1273 0.0 1375
MS.gene28806.t1 AT4G02070 39.151 212 88 6 4 183 5 207 3.06e-31 134
MS.gene28806.t1 AT4G25540 28.511 947 568 27 299 1180 108 1010 2.22e-85 302
MS.gene28806.t1 AT3G24495 43.988 341 169 7 892 1212 744 1082 1.13e-71 261
MS.gene28806.t1 AT3G24495 33.333 486 293 10 250 731 221 679 7.57e-66 244
MS.gene28806.t1 AT3G24495 33.333 486 293 10 250 731 221 679 4.93e-67 244
MS.gene28806.t1 AT3G18524 31.909 351 222 6 859 1202 541 881 8.38e-44 173
MS.gene28806.t1 AT4G17380 37.917 240 129 6 958 1188 525 753 2.94e-36 149
MS.gene28806.t1 AT4G17380 46.405 153 76 3 958 1110 525 671 1.17e-31 134
MS.gene28806.t1 AT3G24320 39.583 192 110 3 982 1173 514 699 3.20e-28 123
MS.gene28806.t1 AT3G24320 39.583 192 110 3 982 1173 759 944 4.10e-28 123
MS.gene28806.t1 AT3G20475 30.640 297 188 9 911 1203 502 784 1.46e-27 121
MS.gene28806.t1 AT3G20475 32.422 256 155 9 911 1162 502 743 3.82e-24 110
MS.gene28806.t1 AT3G20475 31.855 248 151 9 911 1154 502 735 5.15e-22 103
MS.gene28806.t1 AT5G54090 29.557 203 129 6 972 1171 424 615 1.32e-15 82.8
MS.gene28806.t1 AT1G65070 25.084 299 209 7 877 1171 288 575 8.85e-13 73.6
MS.gene28806.t1 AT1G65070 25.084 299 209 7 877 1171 288 575 1.41e-12 72.8
MS.gene28806.t1 AT1G65070 25.084 299 209 7 877 1171 288 575 1.42e-12 72.8
MS.gene28806.t1 AT1G65070 25.084 299 209 7 877 1171 288 575 4.57e-12 70.9

Find 290 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTTTGCTTGGCTGTGATTT+TGG 0.151082 7.4:+5932089 MS.gene28806:CDS
GCCTCCTTTATTCTTCTTAC+AGG 0.162950 7.4:+5932030 MS.gene28806:CDS
GATCATCTGAAGAGAATTTA+TGG 0.180715 7.4:+5929299 MS.gene28806:CDS
ATTGGCGCCTTTGAATAATT+TGG 0.206877 7.4:+5926867 MS.gene28806:CDS
CCGCAACCGTTTAAGCTTCT+TGG 0.211969 7.4:-5926497 None:intergenic
GCTCAGAAGTTTCACTTTCT+AGG 0.220678 7.4:+5927403 MS.gene28806:CDS
AGAGTGGAAATGAAGTTAAT+AGG 0.221825 7.4:+5926824 MS.gene28806:CDS
ACGAAGTCACCTTTCTTTAC+AGG 0.240867 7.4:+5933555 MS.gene28806:CDS
TAATTCCAAATGTGGAATTC+TGG 0.241545 7.4:+5929258 MS.gene28806:CDS
TCCTGAAGCTGCATATTTAA+TGG 0.259152 7.4:+5928669 MS.gene28806:CDS
GGAAGCTGTTGCAGGTTTAA+AGG 0.263336 7.4:+5929809 MS.gene28806:CDS
GACAAATTCCTCACAAAATC+TGG 0.269200 7.4:-5927695 None:intergenic
AACCAATGTGTTACGGCGTT+TGG 0.270484 7.4:+5929720 MS.gene28806:CDS
TATTATACGGCCGGAGTTAT+TGG 0.272733 7.4:-5930908 None:intergenic
CAACTTTGATTGGAAGAGTT+TGG 0.276106 7.4:-5933914 None:intergenic
GGAGAAGATTGAGTGGATTC+AGG 0.297208 7.4:+5926465 MS.gene28806:CDS
CTAGGGTTAGGGTTAGGGTT+AGG 0.303152 7.4:-5926196 None:intergenic
TCAAAAGGCACATTAATAGA+TGG 0.309098 7.4:+5928628 MS.gene28806:CDS
GCCATTAAATATGCAGCTTC+AGG 0.319588 7.4:-5928670 None:intergenic
TGGCACGGGTGCTCTCTTCT+AGG 0.330298 7.4:+5930456 MS.gene28806:CDS
CAGATCTCTTATGTTGGTAT+TGG 0.331238 7.4:+5931135 MS.gene28806:intron
TTAGGGTTAGGGTTAGGTTT+TGG 0.333327 7.4:-5926184 None:intergenic
CGCCGAAGCTCCATCTGTTC+AGG 0.336095 7.4:-5928359 None:intergenic
CTCATCAACCCAACTTTGAT+TGG 0.337658 7.4:-5933924 None:intergenic
GGAATGGGATTATTAGGGTT+TGG 0.338626 7.4:-5926163 None:intergenic
AGCAGAAACGGAGAGTCTTC+AGG 0.339726 7.4:+5929593 MS.gene28806:CDS
GGCGCGGTTCTTCTCCTATC+AGG 0.339946 7.4:+5926518 MS.gene28806:CDS
GTAGGACTAGGGTTAGGGTT+AGG 0.340620 7.4:-5926202 None:intergenic
TAGGACTAGGGTTAGGGTTA+GGG 0.341151 7.4:-5926201 None:intergenic
GTTAGGGTAGGACTAGGGTT+AGG 0.344466 7.4:-5926208 None:intergenic
TGCTCTCTATTATTTGAAAC+AGG 0.349767 7.4:+5929436 MS.gene28806:CDS
TTAAACCTGCAACAGCTTCC+TGG 0.356135 7.4:-5929806 None:intergenic
CCTGCGTGGTCTTGAACTTA+TGG 0.357425 7.4:+5930665 MS.gene28806:CDS
GGAATGTATTGATCTTTCTA+AGG 0.363678 7.4:+5926444 MS.gene28806:CDS
TAGGGTTAGGGTTAGGGTTA+GGG 0.364815 7.4:-5926195 None:intergenic
GGAGAGAGAGGGAGAGGGAG+AGG 0.366098 7.4:-5926128 None:intergenic
GTCTAGGACACCCTGTTCTT+AGG 0.369436 7.4:+5931944 MS.gene28806:CDS
TGAGAGGTGAAGGTGTGGTT+AGG 0.371901 7.4:-5926225 None:intergenic
CTCCTTCATGAGGTATTATA+CGG 0.373099 7.4:-5930921 None:intergenic
ATCTCCTGGACGCCTTCGTT+TGG 0.373919 7.4:-5927639 None:intergenic
AGAATAAAGGAGGCCTGGTC+TGG 0.374566 7.4:-5932021 None:intergenic
TACAATATCACCGCCTCCTT+CGG 0.377124 7.4:+5926294 MS.gene28806:CDS
TCGTAATTCATTGGTGGCTC+TGG 0.380170 7.4:+5932875 MS.gene28806:CDS
CCACCTATGGTTATGTCATT+AGG 0.380822 7.4:-5931997 None:intergenic
GTTGACTTCCCACCCATGTT+AGG 0.382734 7.4:-5932054 None:intergenic
GGGAGAGGGAGAAGATGAAA+GGG 0.383062 7.4:-5926113 None:intergenic
ACCAATGTGTTACGGCGTTT+GGG 0.383653 7.4:+5929721 MS.gene28806:CDS
GAGTGGAAATGAAGTTAATA+GGG 0.383967 7.4:+5926825 MS.gene28806:CDS
GTAAACGAATCAAGGTTTAC+TGG 0.384133 7.4:+5926332 MS.gene28806:CDS
ATTTCAAGGATGCCTTTGAT+TGG 0.387401 7.4:+5930878 MS.gene28806:CDS
TGAAAGGGGAGAAGTGGATT+TGG 0.388522 7.4:-5926098 None:intergenic
TACAGGGCTTCGTTAGGTAT+TGG 0.390031 7.4:+5931420 MS.gene28806:intron
ACCTGACATGGAGCGGTTGC+TGG 0.392250 7.4:+5930436 MS.gene28806:CDS
CAAACTCTTCCAATCAAAGT+TGG 0.392529 7.4:+5933915 MS.gene28806:CDS
GAACGCCAGGAAGCTGTTGC+AGG 0.394933 7.4:+5929801 MS.gene28806:CDS
TTGATTCGTTTACCAATGAA+TGG 0.395151 7.4:-5926322 None:intergenic
GCTACAAGCAGAGTCATTCT+TGG 0.395732 7.4:+5928766 MS.gene28806:CDS
CTTCCTCCAAGAAGCTTAAA+CGG 0.396470 7.4:+5926491 MS.gene28806:CDS
CCTTCGGATTCTCCATTCAT+TGG 0.397165 7.4:+5926310 MS.gene28806:CDS
AACATTAACACCGTAGCTCT+TGG 0.401484 7.4:-5933597 None:intergenic
ATATCACGTGGAGTCAATAA+AGG 0.405153 7.4:+5929779 MS.gene28806:CDS
AGAATATGATTCAGCTTGTA+AGG 0.405787 7.4:+5930951 MS.gene28806:CDS
TTAGGGTTAGGGTTAGGGTT+AGG 0.405824 7.4:-5926190 None:intergenic
GCATCCCAGAATTCCACATT+TGG 0.409996 7.4:-5929263 None:intergenic
AGGACCTGTAAGAAGAATAA+AGG 0.411814 7.4:-5932034 None:intergenic
GGGAGCTTCATTTGTACATA+AGG 0.412222 7.4:-5931905 None:intergenic
ATTCATTGGTAAACGAATCA+AGG 0.412888 7.4:+5926324 MS.gene28806:CDS
GCTCTGGATGAGCTTGGGCG+TGG 0.413063 7.4:+5932891 MS.gene28806:CDS
GCCAGCAACCGCTCCATGTC+AGG 0.418908 7.4:-5930437 None:intergenic
ACATTAACACCGTAGCTCTT+GGG 0.420561 7.4:-5933596 None:intergenic
AGCTTGAATTGCAGTATATG+AGG 0.422859 7.4:+5928008 MS.gene28806:CDS
CATAAGGTCCCAACAAAACT+TGG 0.423951 7.4:-5931889 None:intergenic
GTTAATGTTGCTCGGTTAGC+TGG 0.424808 7.4:+5933611 MS.gene28806:CDS
CTTGAGATGATCTAACAAAC+TGG 0.428020 7.4:-5930992 None:intergenic
CTTCATTTCCACTACCAACT+TGG 0.428144 7.4:-5933526 None:intergenic
AATTCCAAATGTGGAATTCT+GGG 0.429851 7.4:+5929259 MS.gene28806:CDS
AAGGTGTCACTCCTAAGAAC+AGG 0.430782 7.4:-5931955 None:intergenic
ATACGTGGCCTCGAATTCTC+TGG 0.432996 7.4:-5933864 None:intergenic
TCTTCTTCGCCAAGTTTGCT+TGG 0.433375 7.4:+5932077 MS.gene28806:CDS
AAATCACAGCCAAGCAAACT+TGG 0.436638 7.4:-5932086 None:intergenic
AGGGAGAGGGAGAAGATGAA+AGG 0.438342 7.4:-5926114 None:intergenic
CAAATATCTCGAGATTCTCT+AGG 0.439006 7.4:-5929565 None:intergenic
TTTCAAGGATGCCTTTGATT+GGG 0.441751 7.4:+5930879 MS.gene28806:CDS
AGAAGATGAAAGGGGAGAAG+TGG 0.442853 7.4:-5926104 None:intergenic
GGCATTTACAGGGCTTCGTT+AGG 0.442920 7.4:+5931414 MS.gene28806:intron
CTGGGATGCTGATAGAACTT+TGG 0.443715 7.4:+5929277 MS.gene28806:CDS
GCCAGCCATGATATTATCTC+TGG 0.444404 7.4:-5932348 None:intergenic
CTCTGGATGAGCTTGGGCGT+GGG 0.447621 7.4:+5932892 MS.gene28806:CDS
GAGGAATTTGTCAGGTGGCC+AGG 0.448895 7.4:+5927706 MS.gene28806:CDS
GCAGGTTTCACAATTTCAAC+TGG 0.449601 7.4:-5929167 None:intergenic
TTGGTGGCTCTGGATGAGCT+TGG 0.451279 7.4:+5932885 MS.gene28806:CDS
TCAATCACCATCTTCCTGAT+AGG 0.452754 7.4:-5926532 None:intergenic
TTCACTGAGAAATTCTTCTC+TGG 0.453880 7.4:-5928160 None:intergenic
GAGAGGTGAAGGTGTGGTTA+GGG 0.455059 7.4:-5926224 None:intergenic
CAAAAGGCACATTAATAGAT+GGG 0.457854 7.4:+5928629 MS.gene28806:CDS
TCGTACCAGGCTTCGTCTAA+AGG 0.459471 7.4:-5926355 None:intergenic
CTACAAGCAGAGTCATTCTT+GGG 0.468134 7.4:+5928767 MS.gene28806:CDS
CATGGATCTGAATCATTTCA+AGG 0.469617 7.4:+5930864 MS.gene28806:CDS
TAAAGGAAAGAGTAGCAATA+AGG 0.469819 7.4:+5926741 MS.gene28806:intron
CTCAGTGAATGTAGAGAGAC+TGG 0.470800 7.4:+5928174 MS.gene28806:CDS
AAACTCTTCCAATCAAAGTT+GGG 0.471127 7.4:+5933916 MS.gene28806:CDS
TGGTGGCTCTGGATGAGCTT+GGG 0.474116 7.4:+5932886 MS.gene28806:CDS
GCTCTATCTTGTCTGAGATC+AGG 0.476786 7.4:+5929144 MS.gene28806:CDS
CATGGAGCGGTTGCTGGCAC+GGG 0.477706 7.4:+5930442 MS.gene28806:CDS
ATCTAAGCAACTGCTCATCT+AGG 0.478804 7.4:-5929463 None:intergenic
ATTGACTCCACGTGATATAA+CGG 0.479752 7.4:-5929774 None:intergenic
CACCTGAACAGATGGAGCTT+CGG 0.481803 7.4:+5928357 MS.gene28806:CDS
GATGGTGATTGAGGAGAATG+AGG 0.484439 7.4:+5926543 MS.gene28806:CDS
GGCCTCGAATTCTCTGGACT+TGG 0.484449 7.4:-5933858 None:intergenic
ATCAGCCACTCGTAATTCAT+TGG 0.488238 7.4:+5932866 MS.gene28806:CDS
CTCTCATGCTGAATCTGAAA+GGG 0.489062 7.4:+5931475 MS.gene28806:CDS
TTAGGGTAGGACTAGGGTTA+GGG 0.489364 7.4:-5926207 None:intergenic
ATTGCTAGTGATTACTATGA+AGG 0.489400 7.4:+5931853 MS.gene28806:CDS
ACATGGAGCGGTTGCTGGCA+CGG 0.489449 7.4:+5930441 MS.gene28806:CDS
GAGAGAGAGGGAGAGGGAGA+GGG 0.490371 7.4:-5926127 None:intergenic
TGTAGAGAGACTGGCTAGAA+AGG 0.491181 7.4:+5928183 MS.gene28806:CDS
TAAAAGATGACTAAGCTGTC+TGG 0.493182 7.4:-5930733 None:intergenic
GTGCGCTCTGACATTTCACT+TGG 0.493379 7.4:-5928718 None:intergenic
TAAATATGCAGCTTCAGGAT+TGG 0.495476 7.4:-5928665 None:intergenic
TAATAAAGTGGTTCTGTATG+AGG 0.495859 7.4:+5930605 MS.gene28806:CDS
TTCAGATCCATGCTTACATC+AGG 0.496298 7.4:-5930853 None:intergenic
GGCCTGGTCTGGACCACCTA+TGG 0.496477 7.4:-5932010 None:intergenic
GCAGAAACGGAGAGTCTTCA+GGG 0.500501 7.4:+5929594 MS.gene28806:CDS
GAAGGAGGCGGTGATATTGT+AGG 0.501005 7.4:-5926292 None:intergenic
GTTCTTAGGAGTGACACCTT+AGG 0.502432 7.4:+5931958 MS.gene28806:CDS
ACCAGCTCCAGTAAAACATC+TGG 0.503484 7.4:-5929368 None:intergenic
TTTGACAGTACCTTCGTACC+AGG 0.503746 7.4:-5926368 None:intergenic
CAAGTTGGTAGTGGAAATGA+AGG 0.504132 7.4:+5933527 MS.gene28806:CDS
GACTGAAACACCTGAACAGA+TGG 0.505373 7.4:+5928349 MS.gene28806:CDS
TACTCAGTGCTGAAACAGAA+AGG 0.506285 7.4:+5929195 MS.gene28806:CDS
ACTGGCCTTTAGACGAAGCC+TGG 0.508254 7.4:+5926350 MS.gene28806:CDS
TTCAGAAACTGCAACAATGC+TGG 0.508469 7.4:+5932394 MS.gene28806:CDS
TCAGCACTGAGTAGTTTAGC+AGG 0.508590 7.4:-5929185 None:intergenic
GACAATTCAAAACTTTCTGA+AGG 0.508600 7.4:-5932293 None:intergenic
CAACCGTTTAAGCTTCTTGG+AGG 0.510878 7.4:-5926494 None:intergenic
CGTGGGACCTCAACGTCTGA+TGG 0.511144 7.4:+5932909 MS.gene28806:CDS
TGCCAAGTCCAGAGAATTCG+AGG 0.511558 7.4:+5933856 MS.gene28806:CDS
TGGAAAGGACACATACCTAT+TGG 0.515871 7.4:+5931155 MS.gene28806:CDS
TAAGAAGAATAAAGGAGGCC+TGG 0.517562 7.4:-5932026 None:intergenic
TGGTAGTGGAAATGAAGGTT+TGG 0.520746 7.4:+5933532 MS.gene28806:CDS
TCTTGCTTCAAAACCATACA+TGG 0.521293 7.4:+5929526 MS.gene28806:CDS
AAGGAACAAAGGAAATTACT+TGG 0.522279 7.4:+5931012 MS.gene28806:CDS
ATGGCATGCCAAGTTGGTAG+TGG 0.522448 7.4:+5933518 MS.gene28806:CDS
GCCAGAGATAATATCATGGC+TGG 0.523474 7.4:+5932347 MS.gene28806:CDS
TTTCTGGGATTGAGAGGTGA+AGG 0.523572 7.4:-5926235 None:intergenic
AGCTGTTAAGCTCCCACCAT+TGG 0.524736 7.4:+5926849 MS.gene28806:CDS
ATGACGAGACGCGGTTTGTG+TGG 0.524968 7.4:-5926259 None:intergenic
GGTGAAGGTGTGGTTAGGGT+AGG 0.525003 7.4:-5926220 None:intergenic
TCAATTAAACCAATGTGTTA+CGG 0.526620 7.4:+5929713 MS.gene28806:CDS
TTAGACGAAGCCTGGTACGA+AGG 0.526731 7.4:+5926358 MS.gene28806:CDS
GATGCCAAACGAAGGCGTCC+AGG 0.527682 7.4:+5927635 MS.gene28806:CDS
GGCGCAGACAATGTTGCAAC+TGG 0.527921 7.4:+5927349 MS.gene28806:CDS
TTTCACTTGGATTGTTCTCA+CGG 0.528806 7.4:-5928705 None:intergenic
AAGCAGAGTCATTCTTGGGC+AGG 0.530004 7.4:+5928771 MS.gene28806:CDS
TGTCTTCTAGGTTGTGAGAC+GGG 0.530777 7.4:+5928588 MS.gene28806:intron
ACAGCATCAAGAACCATGTA+TGG 0.531206 7.4:-5929539 None:intergenic
GGTTGATGAGATAATAGTCT+TGG 0.531511 7.4:+5933937 MS.gene28806:CDS
CAGTTGGTGTCTGCAACTGC+TGG 0.534677 7.4:+5931566 MS.gene28806:CDS
GAGCTTCGGCGCAAGGAGAA+CGG 0.534768 7.4:+5928371 MS.gene28806:CDS
ATATTTGAGAATAGCAGAAA+CGG 0.536056 7.4:+5929581 MS.gene28806:CDS
TGTTGCAGTTTCTGAAAGCT+CGG 0.537660 7.4:-5932387 None:intergenic
ATATGCGCAGTGGTTTCAAA+AGG 0.539354 7.4:+5928613 MS.gene28806:CDS
AAATTATTCAAAGGCGCCAA+TGG 0.539998 7.4:-5926865 None:intergenic
TATCAGGAAGATGGTGATTG+AGG 0.540522 7.4:+5926534 MS.gene28806:CDS
GGCGCCTTTGAATAATTTGG+AGG 0.541353 7.4:+5926870 MS.gene28806:CDS
TCTCTCATGCTGAATCTGAA+AGG 0.542042 7.4:+5931474 MS.gene28806:CDS
AGCGGACAGCCTGTAAAGAA+AGG 0.544754 7.4:-5933564 None:intergenic
CAAGGATGCCTTTGATTGGG+TGG 0.545507 7.4:+5930882 MS.gene28806:CDS
TCTTCTTACAGGTCCTAACA+TGG 0.545833 7.4:+5932041 MS.gene28806:CDS
CCAAGAAGCTTAAACGGTTG+CGG 0.546594 7.4:+5926497 MS.gene28806:CDS
TTTCTTTACAGGCTGTCCGC+TGG 0.546981 7.4:+5933566 MS.gene28806:CDS
ATTTGTCGCAGAATATTCCT+CGG 0.547040 7.4:+5931190 MS.gene28806:CDS
GGAGTCAATAAAGGAACGCC+AGG 0.547592 7.4:+5929788 MS.gene28806:CDS
TTCTTCTCCTATCAGGAAGA+TGG 0.547774 7.4:+5926525 MS.gene28806:CDS
CTATGACAGATCTCTTATGT+TGG 0.552864 7.4:+5931129 MS.gene28806:intron
TCGTTATGATGATGATGAAG+AGG 0.552933 7.4:+5926423 MS.gene28806:CDS
GTACGTAGCGTGCAGTGTCG+TGG 0.553211 7.4:+5933084 MS.gene28806:CDS
TTTGAAATGGATGCACATGT+AGG 0.554093 7.4:+5927977 MS.gene28806:CDS
AAGCTTCACTATAGAGTGAT+CGG 0.554263 7.4:-5934011 None:intergenic
CTCTTATGTTGGTATTGGAA+AGG 0.556055 7.4:+5931140 MS.gene28806:CDS
GAGCACTAAAATCGTTATTG+TGG 0.557499 7.4:-5929322 None:intergenic
CATTAACACCGTAGCTCTTG+GGG 0.557755 7.4:-5933595 None:intergenic
ATTGGCTTCCACCCAATCAA+AGG 0.558713 7.4:-5930890 None:intergenic
AGAGAATTCGAGGCCACGTA+TGG 0.559797 7.4:+5933866 MS.gene28806:CDS
AGTGAAACTTCTGAGCTTCG+CGG 0.561044 7.4:-5927396 None:intergenic
GCACAAGCTTGCTTGTCACT+CGG 0.561258 7.4:+5930687 MS.gene28806:CDS
AACCATAGGTGGTCCAGACC+AGG 0.561685 7.4:+5932008 MS.gene28806:CDS
TACAAAGGCACTCTTTCCTA+AGG 0.561689 7.4:-5931974 None:intergenic
TTTGTCGCAGAATATTCCTC+GGG 0.561787 7.4:+5931191 MS.gene28806:CDS
ACAGATGGAGCTTCGGCGCA+AGG 0.563478 7.4:+5928364 MS.gene28806:CDS
AGCCACTCGTAATTCATTGG+TGG 0.564226 7.4:+5932869 MS.gene28806:CDS
TTCATGAGGTATTATACGGC+CGG 0.565363 7.4:-5930917 None:intergenic
GGTGTGGTTAGGGTAGGACT+AGG 0.565617 7.4:-5926214 None:intergenic
TGGAAGGAATGCTAATAAAG+TGG 0.565708 7.4:+5930593 MS.gene28806:CDS
GAATTAACTCATTCACTAGA+GGG 0.566090 7.4:-5929241 None:intergenic
GCTCACATGGCATGCCAAGT+TGG 0.566170 7.4:+5933512 MS.gene28806:CDS
TACATCTATGCTAAAAGTCT+AGG 0.570534 7.4:+5931928 MS.gene28806:CDS
GGAATTAACTCATTCACTAG+AGG 0.571162 7.4:-5929242 None:intergenic
GGAGAACGGCTCTAAAGATA+AGG 0.572138 7.4:+5928385 MS.gene28806:CDS
TTATTCAAAGGCGCCAATGG+TGG 0.572240 7.4:-5926862 None:intergenic
GGTACTTGCCCCAAGAGCTA+CGG 0.572527 7.4:+5933587 MS.gene28806:CDS
ACTCAGTGCTGAAACAGAAA+GGG 0.573892 7.4:+5929196 MS.gene28806:CDS
TCCCAAACGCCGTAACACAT+TGG 0.574302 7.4:-5929722 None:intergenic
GGAGAGGGAGAAGATGAAAG+GGG 0.576376 7.4:-5926112 None:intergenic
TTTCTAAGGAGAAGATTGAG+TGG 0.576427 7.4:+5926458 MS.gene28806:CDS
AAAGGTCTGTCTCGCTCACA+TGG 0.577448 7.4:+5933499 MS.gene28806:intron
ATGGTGATTGAGGAGAATGA+GGG 0.579087 7.4:+5926544 MS.gene28806:CDS
AATGGAGAATCCGAAGGAGG+CGG 0.579612 7.4:-5926304 None:intergenic
AGCTTTCTGAAGCACAGAAG+TGG 0.579708 7.4:-5933831 None:intergenic
GCTACGGTGTTAATGTTGCT+CGG 0.580069 7.4:+5933603 MS.gene28806:CDS
GAATGAGTTAATTCCAAATG+TGG 0.581557 7.4:+5929250 MS.gene28806:CDS
TATTCAAAGGCGCCAATGGT+GGG 0.581898 7.4:-5926861 None:intergenic
GCTTGAATTGCAGTATATGA+GGG 0.582237 7.4:+5928009 MS.gene28806:CDS
CGTTCTGTATTTACCATACG+TGG 0.582471 7.4:-5933879 None:intergenic
TTCTCTGGAAAACCACAATG+AGG 0.585216 7.4:-5928145 None:intergenic
AGAAGTGCACTCTCAGCACT+TGG 0.585933 7.4:+5929410 MS.gene28806:CDS
GCGCCTTTGAATAATTTGGA+GGG 0.587149 7.4:+5926871 MS.gene28806:CDS
GGAAGAGACTGCTAAAGTCA+TGG 0.587236 7.4:+5929742 MS.gene28806:CDS
ACAAAACTTGGTCTGCATGT+TGG 0.587327 7.4:-5931877 None:intergenic
GTACCTAATGACATAACCAT+AGG 0.587761 7.4:+5931994 MS.gene28806:CDS
ACAATTCAAAACTTTCTGAA+GGG 0.588284 7.4:-5932292 None:intergenic
CATGAAAGCAGGGATGCTAG+TGG 0.591004 7.4:+5930573 MS.gene28806:intron
TTACAGGTCCTAACATGGGT+GGG 0.593036 7.4:+5932046 MS.gene28806:CDS
GCTTTCTGAAGCACAGAAGT+GGG 0.593242 7.4:-5933830 None:intergenic
CATAAGTTCAAGACCACGCA+GGG 0.593320 7.4:-5930664 None:intergenic
AGGTCTTCCTGATGTAAGCA+TGG 0.593997 7.4:+5930846 MS.gene28806:CDS
GGCCGTATAATACCTCATGA+AGG 0.595756 7.4:+5930919 MS.gene28806:CDS
GTGTGGTTAGGGTAGGACTA+GGG 0.597010 7.4:-5926213 None:intergenic
GAAATGTCAGAGCGCACCTA+CGG 0.597696 7.4:+5928724 MS.gene28806:CDS
AAATATCTCGAGATTCTCTA+GGG 0.598045 7.4:-5929564 None:intergenic
TGTCTTGGTACAGAGATCGC+AGG 0.600238 7.4:+5927612 MS.gene28806:intron
TCTTTGTCAACTCCTTCATG+AGG 0.601102 7.4:-5930931 None:intergenic
GCAGTTAGAAAGACATCTGA+CGG 0.602012 7.4:+5927328 MS.gene28806:intron
CAAAGTTACCTGACATGGAG+CGG 0.602545 7.4:+5930429 MS.gene28806:CDS
CTCAGACAAGATAGAGCACA+AGG 0.604443 7.4:-5929138 None:intergenic
AAAAGGCACATTAATAGATG+GGG 0.608960 7.4:+5928630 MS.gene28806:CDS
AGATTATCTCAAAGATCCCA+AGG 0.613826 7.4:+5933140 MS.gene28806:CDS
TCACCCTCCAAATTATTCAA+AGG 0.615135 7.4:-5926874 None:intergenic
CTTACAGGTCCTAACATGGG+TGG 0.616004 7.4:+5932045 MS.gene28806:CDS
TTTCGAAATTCTAGCGTGTG+AGG 0.617291 7.4:-5930398 None:intergenic
GGTTATGTCATTAGGTACAA+AGG 0.618898 7.4:-5931989 None:intergenic
AGTGCACTCTCAGCACTTGG+TGG 0.620015 7.4:+5929413 MS.gene28806:CDS
GGCTTGTCCATCAGACGTTG+AGG 0.620456 7.4:-5932916 None:intergenic
CAGTTTGTTAGATCATCTCA+AGG 0.621088 7.4:+5930993 MS.gene28806:CDS
ACGCAAGAAAACTGCTAGCA+CGG 0.621770 7.4:+5934041 MS.gene28806:CDS
CTTCTTACAGGTCCTAACAT+GGG 0.624245 7.4:+5932042 MS.gene28806:CDS
TAGGGAGAGCAACCTCATTG+TGG 0.625346 7.4:+5928133 MS.gene28806:intron
AAAGAAGTGATTTGACGCTG+TGG 0.626840 7.4:-5926070 None:intergenic
TAGATCATCTCAAGGAACAA+AGG 0.627293 7.4:+5931001 MS.gene28806:CDS
ATTATCAAAGTTACCTGACA+TGG 0.627362 7.4:+5930424 MS.gene28806:CDS
GGGTGCCAGAGATAATATCA+TGG 0.627710 7.4:+5932343 MS.gene28806:CDS
TGCAAGACCGTTATATCACG+TGG 0.628002 7.4:+5929767 MS.gene28806:CDS
TTGACGCTGTGGATTGACGA+GGG 0.628247 7.4:-5926059 None:intergenic
TCGCAGCGTCGCAATAGCAA+TGG 0.629309 7.4:+5926028 MS.gene28806:CDS
GCGGAGCGCAAATCTTTCAG+AGG 0.631888 7.4:-5927377 None:intergenic
AGACCACTGAAAACAGCACA+TGG 0.633212 7.4:-5929506 None:intergenic
TCACACTCAGTGGAAGCAGT+TGG 0.633973 7.4:+5931550 MS.gene28806:CDS
ACTGTCAAATCGTTCGATAG+CGG 0.634286 7.4:+5926382 MS.gene28806:CDS
TGGGTGGAAGCCAATAACTC+CGG 0.636891 7.4:+5930898 MS.gene28806:CDS
ATGTCTTCTAGGTTGTGAGA+CGG 0.636937 7.4:+5928587 MS.gene28806:intron
GCTCTTGGGGCAAGTACCAG+CGG 0.638844 7.4:-5933582 None:intergenic
GTCTTGGTACAGAGATCGCA+GGG 0.639706 7.4:+5927613 MS.gene28806:intron
ACCTGTAAGAAGAATAAAGG+AGG 0.640334 7.4:-5932031 None:intergenic
CCTAATGACATAACCATAGG+TGG 0.642373 7.4:+5931997 MS.gene28806:CDS
GAGTTTATTTCAGCCCTGCG+TGG 0.642478 7.4:+5930651 MS.gene28806:CDS
AAAGCAGGGATGCTAGTGGA+AGG 0.642520 7.4:+5930577 MS.gene28806:intron
GGAGGCGGTGATATTGTAGG+AGG 0.651484 7.4:-5926289 None:intergenic
CCATAAGTTCAAGACCACGC+AGG 0.655964 7.4:-5930665 None:intergenic
GGGATTGAGAGGTGAAGGTG+TGG 0.656003 7.4:-5926230 None:intergenic
ATCGCAGGGATGCCAAACGA+AGG 0.657353 7.4:+5927627 MS.gene28806:CDS
GGAGTTCAAGTCAAAACACA+TGG 0.657430 7.4:+5927819 MS.gene28806:CDS
TTTGTGAGGAATTTGTCAGG+TGG 0.659493 7.4:+5927701 MS.gene28806:CDS
ATGAATGGAGAATCCGAAGG+AGG 0.662703 7.4:-5926307 None:intergenic
TTTGTGAACATCACACTCAG+TGG 0.665331 7.4:+5931540 MS.gene28806:CDS
AAATTCCTCACAAAATCTGG+AGG 0.671639 7.4:-5927692 None:intergenic
TTTGACGCTGTGGATTGACG+AGG 0.672326 7.4:-5926060 None:intergenic
AGCCACCAATGAATTACGAG+TGG 0.674310 7.4:-5932871 None:intergenic
CACGTATGGTAAATACAGAA+CGG 0.676522 7.4:+5933880 MS.gene28806:CDS
AAGCTTAAACGGTTGCGGCG+CGG 0.676658 7.4:+5926502 MS.gene28806:CDS
AGGTGTCACTCCTAAGAACA+GGG 0.676676 7.4:-5931954 None:intergenic
CCAATGAATGGAGAATCCGA+AGG 0.689833 7.4:-5926310 None:intergenic
TGACGCTGTGGATTGACGAG+GGG 0.689856 7.4:-5926058 None:intergenic
TTTGGTGAATGCAGAAACAA+TGG 0.691100 7.4:+5927794 MS.gene28806:intron
GAGACGGGAAATATGCGCAG+TGG 0.691857 7.4:+5928603 MS.gene28806:CDS
TGTTAATAATTTGAGCTGCG+AGG 0.692395 7.4:+5933979 MS.gene28806:CDS
GAACGTCTCTCATAATCCCG+AGG 0.697284 7.4:-5931207 None:intergenic
GGTGAATGCAGAAACAATGG+TGG 0.700703 7.4:+5927797 MS.gene28806:intron
GGAGCGTCAATGACGAGACG+CGG 0.702987 7.4:-5926268 None:intergenic
ATCAACTACACAAACACCGT+AGG 0.705252 7.4:-5928740 None:intergenic
GTGAATGCAGAAACAATGGT+GGG 0.716883 7.4:+5927798 MS.gene28806:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr7.4 gene 5926025 5934069 5926025 ID=MS.gene28806
chr7.4 mRNA 5926025 5934069 5926025 ID=MS.gene28806.t1;Parent=MS.gene28806
chr7.4 exon 5926025 5926574 5926025 ID=MS.gene28806.t1.exon1;Parent=MS.gene28806.t1
chr7.4 CDS 5926025 5926574 5926025 ID=cds.MS.gene28806.t1;Parent=MS.gene28806.t1
chr7.4 exon 5926746 5926892 5926746 ID=MS.gene28806.t1.exon2;Parent=MS.gene28806.t1
chr7.4 CDS 5926746 5926892 5926746 ID=cds.MS.gene28806.t1;Parent=MS.gene28806.t1
chr7.4 exon 5927332 5927428 5927332 ID=MS.gene28806.t1.exon3;Parent=MS.gene28806.t1
chr7.4 CDS 5927332 5927428 5927332 ID=cds.MS.gene28806.t1;Parent=MS.gene28806.t1
chr7.4 exon 5927625 5927727 5927625 ID=MS.gene28806.t1.exon4;Parent=MS.gene28806.t1
chr7.4 CDS 5927625 5927727 5927625 ID=cds.MS.gene28806.t1;Parent=MS.gene28806.t1
chr7.4 exon 5927808 5927861 5927808 ID=MS.gene28806.t1.exon5;Parent=MS.gene28806.t1
chr7.4 CDS 5927808 5927861 5927808 ID=cds.MS.gene28806.t1;Parent=MS.gene28806.t1
chr7.4 exon 5927956 5928030 5927956 ID=MS.gene28806.t1.exon6;Parent=MS.gene28806.t1
chr7.4 CDS 5927956 5928030 5927956 ID=cds.MS.gene28806.t1;Parent=MS.gene28806.t1
chr7.4 exon 5928136 5928204 5928136 ID=MS.gene28806.t1.exon7;Parent=MS.gene28806.t1
chr7.4 CDS 5928136 5928204 5928136 ID=cds.MS.gene28806.t1;Parent=MS.gene28806.t1
chr7.4 exon 5928323 5928406 5928323 ID=MS.gene28806.t1.exon8;Parent=MS.gene28806.t1
chr7.4 CDS 5928323 5928406 5928323 ID=cds.MS.gene28806.t1;Parent=MS.gene28806.t1
chr7.4 exon 5928598 5928792 5928598 ID=MS.gene28806.t1.exon9;Parent=MS.gene28806.t1
chr7.4 CDS 5928598 5928792 5928598 ID=cds.MS.gene28806.t1;Parent=MS.gene28806.t1
chr7.4 exon 5929113 5929615 5929113 ID=MS.gene28806.t1.exon10;Parent=MS.gene28806.t1
chr7.4 CDS 5929113 5929615 5929113 ID=cds.MS.gene28806.t1;Parent=MS.gene28806.t1
chr7.4 exon 5929701 5929830 5929701 ID=MS.gene28806.t1.exon11;Parent=MS.gene28806.t1
chr7.4 CDS 5929701 5929830 5929701 ID=cds.MS.gene28806.t1;Parent=MS.gene28806.t1
chr7.4 exon 5930386 5930477 5930386 ID=MS.gene28806.t1.exon12;Parent=MS.gene28806.t1
chr7.4 CDS 5930386 5930477 5930386 ID=cds.MS.gene28806.t1;Parent=MS.gene28806.t1
chr7.4 exon 5930584 5930762 5930584 ID=MS.gene28806.t1.exon13;Parent=MS.gene28806.t1
chr7.4 CDS 5930584 5930762 5930584 ID=cds.MS.gene28806.t1;Parent=MS.gene28806.t1
chr7.4 exon 5930842 5931044 5930842 ID=MS.gene28806.t1.exon14;Parent=MS.gene28806.t1
chr7.4 CDS 5930842 5931044 5930842 ID=cds.MS.gene28806.t1;Parent=MS.gene28806.t1
chr7.4 exon 5931138 5931239 5931138 ID=MS.gene28806.t1.exon15;Parent=MS.gene28806.t1
chr7.4 CDS 5931138 5931239 5931138 ID=cds.MS.gene28806.t1;Parent=MS.gene28806.t1
chr7.4 exon 5931425 5931587 5931425 ID=MS.gene28806.t1.exon16;Parent=MS.gene28806.t1
chr7.4 CDS 5931425 5931587 5931425 ID=cds.MS.gene28806.t1;Parent=MS.gene28806.t1
chr7.4 exon 5931827 5932116 5931827 ID=MS.gene28806.t1.exon17;Parent=MS.gene28806.t1
chr7.4 CDS 5931827 5932116 5931827 ID=cds.MS.gene28806.t1;Parent=MS.gene28806.t1
chr7.4 exon 5932278 5932415 5932278 ID=MS.gene28806.t1.exon18;Parent=MS.gene28806.t1
chr7.4 CDS 5932278 5932415 5932278 ID=cds.MS.gene28806.t1;Parent=MS.gene28806.t1
chr7.4 exon 5932864 5932943 5932864 ID=MS.gene28806.t1.exon19;Parent=MS.gene28806.t1
chr7.4 CDS 5932864 5932943 5932864 ID=cds.MS.gene28806.t1;Parent=MS.gene28806.t1
chr7.4 exon 5933062 5933161 5933062 ID=MS.gene28806.t1.exon20;Parent=MS.gene28806.t1
chr7.4 CDS 5933062 5933161 5933062 ID=cds.MS.gene28806.t1;Parent=MS.gene28806.t1
chr7.4 exon 5933503 5933632 5933503 ID=MS.gene28806.t1.exon21;Parent=MS.gene28806.t1
chr7.4 CDS 5933503 5933632 5933503 ID=cds.MS.gene28806.t1;Parent=MS.gene28806.t1
chr7.4 exon 5933825 5934069 5933825 ID=MS.gene28806.t1.exon22;Parent=MS.gene28806.t1
chr7.4 CDS 5933825 5934069 5933825 ID=cds.MS.gene28806.t1;Parent=MS.gene28806.t1
Gene Sequence

>MS.gene28806

ATGTCGCAGCGTCGCAATAGCAATGGTAGATCACCCCTCGTCAATCCACAGCGTCAAATCACTTCTTTCTTTACCAAATCCACTTCTCCCCTTTCATCTTCTCCCTCTCCCTCTCCCTCTCTCTCCAAAACCCTAAAACCAAACCCTAATAATCCCATTCCAAAACCTAACCCTAACCCTAACCCTAACCCTAGTCCTACCCTAACCACACCTTCACCTCTCAATCCCAGAAAACCACACAAACCGCGTCTCGTCATTGACGCTCCTCCTACAATATCACCGCCTCCTTCGGATTCTCCATTCATTGGTAAACGAATCAAGGTTTACTGGCCTTTAGACGAAGCCTGGTACGAAGGTACTGTCAAATCGTTCGATAGCGGTACTTCGAAACATCGAATTCGTTATGATGATGATGAAGAGGAATGTATTGATCTTTCTAAGGAGAAGATTGAGTGGATTCAGGATTCTTCCTCCAAGAAGCTTAAACGGTTGCGGCGCGGTTCTTCTCCTATCAGGAAGATGGTGATTGAGGAGAATGAGGGAGAAGAAAGTCCCAAAGAGGAAAAACAAGAAGAAGAAGAAGAAGAAGATGATGATGATAATGATGATTCGGAAGATGAAGACTGGGGGAAGAATGCTGTATTGGAGAATGTTGTGGATGATGATGAAGAAGAAGATATGGAATTAGAGGAAGAAAATGAAGTTGTAGAGAGTGCTAAAGGAAAGAGTAGCAATAAGGTTGAGCCGAAAAAGCGGAAACTAGGCGGAGGAGCAAAAATGGAGCCGATGAAAAAGAGCAAGAGTGGAAATGAAGTTAATAGGGTAGCTGTTAAGCTCCCACCATTGGCGCCTTTGAATAATTTGGAGGGTGAGTGACCAAGTTAATCCACACCCAATCTTTGTTTTAATGTATTGAGAATTGGGGTTAATTTTGTTTCTGTTATTCACACCTTTTATAGAATATTGATATGAATGCATCCTGACACATATGTTGATTTTCAAATTTAGCCATAAATAGTGTATTTTTATCAAATCAGAGATAGTTATGTTGGATAAATGAGATGCTAGAAGCCATTTTTCAATGATAAACAAGATTATGTACAAAATTATTTGCTATTTATAAGATTACATGCAAAATTATTCGCTATTTATAAGTTTACGCAATTTGTTTTCCTTACTGGCGCCATTTTCATGGCGCACCATTCATTTATTGGGTGCTGGAGATGTTACTTGCCAAATGAAATGCAGATATCAATTTTTTATTCTTTTTTAAATTAATAATTTACATCACACCTTGCATTATGCAGTTAGAAAGACATCTGACGGCGCAGACAATGTTGCAACTGGTGATGCCTCTGAAAGATTTGCGCTCCGCGAAGCTCAGAAGTTTCACTTTCTAGGAAAGTGAGTACTAACTGTAGCAATGTAGCATTTTGTTTAAGTTGCCAAAATCCACCTATTTATTAAAGGGATTCGTATGGCATGCCATTTTGTGTGTATGCAGTTATTTGCTGTTATTGCCATTCTCTCAAGTATTTAATTTGCTGGTTTATATTATAATTTTATTTATGGTTCCTGTATGTATGTTGTCTTGGTACAGAGATCGCAGGGATGCCAAACGAAGGCGTCCAGGAGATGAAAATTATGATTCAAGAACTCTCTACTTGCCTCCAGATTTTGTGAGGAATTTGTCAGGTGGCCAGGTAATTACCGCAAAAGTAGTAGGATGAAACCCTCAATTTTAATGTTGCATGAAATTAATACGATCATTTGGTGAATGCAGAAACAATGGTGGGAGTTCAAGTCAAAACACATGGACAAAGTTTTGTTTTTCAAGGTTTTTAACTGGCTAAGTTTTGTTGGTGTCATTAGTCCATTCCTTACATGTTACAATTAAATAAAATATTTCTTTCCCCATTTTATTGGAGCAGATGGGTAAATTTTATGAGCTTTTTGAAATGGATGCACATGTAGGAGCAAAAGAGCTTGAATTGCAGTATATGAGGGTTAGTATGAGTACTTGAGTTATGGATTTTCTTTAGAATACTAAGGAGCTGCTTTTGATTATGCTGAACTGTACATGTTTATTGGTTAAAATGTGACTCTTTTAGGGAGAGCAACCTCATTGTGGTTTTCCAGAGAAGAATTTCTCAGTGAATGTAGAGAGACTGGCTAGAAAGGTTTGTCACATAGTTGGCCTATTTTTCTTATTTAACTGCTGCTACCAAACTAATTAATATGTCCTACAAGCCACCTTCCAACTGGGGAGGAACTTACTGAATTGCCTTCGATGGGCAGGGTTATCGAGTTCTTGTTGTAGAGCAGACTGAAACACCTGAACAGATGGAGCTTCGGCGCAAGGAGAACGGCTCTAAAGATAAGGTCTGATTACACCTCACCTAAACCAGAAAAGTCATTGTTTTATTTCTACCTTCTTTTGGATACTGTGCTTGCTATATATTTTGAATGTAGTTTTGCATCTTTTTTATTTTGCCAAGTTAGTTTTCTTTCTAACCCCAGTGTTAGTAGAGGAATAATGGTCTCTAATCTTGACCTCTCTCGATGTCTTCTAGGTTGTGAGACGGGAAATATGCGCAGTGGTTTCAAAAGGCACATTAATAGATGGGGAGTTTATGTCAACCAATCCTGAAGCTGCATATTTAATGGCACTGACTGAGTACCGTGAGAACAATCCAAGTGAAATGTCAGAGCGCACCTACGGTGTTTGTGTAGTTGATGTTGCTACAAGCAGAGTCATTCTTGGGCAGGTATGATTATGTTTTCTAATTCTCAGGCGAAATTTCTTTAGATATAAACTCGTCCCAAGTTTTTTGGCGTGATCTGTTAATGCAATCAAGCTTTTAATTTTTGGCAAGATCTGTAAATTTTTTGGGGATTTCTTTTCTAGAATTTGTGTTGGTAAATTAATATCTATTGTATGTTTGCTCAAATTTTCAGTATTTGTTCGGTTGCTTCAATCCTTCCTCCAATTGTTTTAGAGAACATTCACACTTTGTTAATATTCATTCTACTAAATATGGACTTAATTAATCTTTTAATTGCCTATGGCATCATTTTTATATGGCAGTTCAACGATGACTCAGAGTGCAGTGCCTTGTGCTCTATCTTGTCTGAGATCAGGCCAGTTGAAATTGTGAAACCTGCTAAACTACTCAGTGCTGAAACAGAAAGGGTACTGCTGAAACACACGAGAAACCCTCTAGTGAATGAGTTAATTCCAAATGTGGAATTCTGGGATGCTGATAGAACTTTGGATCATCTGAAGAGAATTTATGGCCACAATAACGATTTTAGTGCTCAAGATGGCGGGTTAGATTGTCTGCCAGATGTTTTACTGGAGCTGGTGAAAACAGATCATGACAGTAGAAGTGCACTCTCAGCACTTGGTGGTGCTCTCTATTATTTGAAACAGGCTTTCCTAGATGAGCAGTTGCTTAGATTCGCGCAGTTTGAGTTGCTTCCATGTGCTGTTTTCAGTGGTCTTGCTTCAAAACCATACATGGTTCTTGATGCTGTAGCCCTAGAGAATCTCGAGATATTTGAGAATAGCAGAAACGGAGAGTCTTCAGGGTATACTTTTCTTTGGATTTATCTACACTCTTTGTAAACGGGTAATATATGTTTATATTTCACTGAAATGATGATTCTTGTGTAGCACGCTCTATGCTCAATTAAACCAATGTGTTACGGCGTTTGGGAAGAGACTGCTAAAGTCATGGCTTGCAAGACCGTTATATCACGTGGAGTCAATAAAGGAACGCCAGGAAGCTGTTGCAGGTTTAAAGGTACATTCCCTGACCATGCATTTTGTTTTTGATTCTGATGTTCCTTTACACCAAGACTGTTGGATTTCTTTTTTCATGTCAGCTATACTTGTTTGTTCTCGTCTGCTTTTTCTTTCCTTTTATTTTGTCCCGCTACTACATGCTCTGGTTTAAAAGTTTTGCATCTCCTTTTGAACTTATATAACTAGCAGTGATCATGGGGAATTGTGCTTTTTTAAAATAGATCTGTAAAACAAAGTCATCTTGTCATATTTATGTTTGCAGCATAATTAACTATTAATTTTTTTTGGGAAGCCTTGCCTCCTCATTCTATGTAGATCCCAGACAGTTTGTTTGGTTTGTTGTGTCCAGCAATACAATATGGAGCATTTTTTTTTAGGAAATTTTCTGCTTTTCTGTTTGTTTTGCTTTCGAACTAATATGGATAGAAGAGTAGCCTGTCATGTACAGTTTCAACATCTACCAACATACTTGGGTAGATTGAACCTATCATTTTCATCAGATACAAAATCAGTATATTTTGTCAATCGTTTTGATATATGATTTACTTTTAAGGGAGTAAATCTACCTCACACGCTAGAATTTCGAAAAGCATTATCAAAGTTACCTGACATGGAGCGGTTGCTGGCACGGGTGCTCTCTTCTAGGTAAAATATATTTTTACAACAAAACTATGCGTGATATTTTTTACAGACCATAGGGATTATCATTGTCGTCTATAGTATTTATGCTTTTTGATTTTCATGAAAGCAGGGATGCTAGTGGAAGGAATGCTAATAAAGTGGTTCTGTATGAGGATTCATCAAAGAAACAACTGCAAGAGTTTATTTCAGCCCTGCGTGGTCTTGAACTTATGGCACAAGCTTGCTTGTCACTCGGTGTCATTTTGAATAATGTCAAATCCAGACAGCTTAGTCATCTTTTAACACCTGGTACAGTTATCTCAATAAATAAATGTTATGAAACGACTCTACAGCTATTGCCTGATGCATTGACTGTTGTGAACTGTAGGTAAAGGTCTTCCTGATGTAAGCATGGATCTGAATCATTTCAAGGATGCCTTTGATTGGGTGGAAGCCAATAACTCCGGCCGTATAATACCTCATGAAGGAGTTGACAAAGAATATGATTCAGCTTGTAAGGCAGTTAATGAGATTGAGTCCAGTTTGTTAGATCATCTCAAGGAACAAAGGAAATTACTTGGAAGCACATCTGTAAGACAAAGACCTATAATGGAAACAGTTGGAGTTTGGTCTTATTATAGTGCATAAAATCAAATTTTGAATGTTCTTATTTGTCTATGACAGATCTCTTATGTTGGTATTGGAAAGGACACATACCTATTGGAAGTGCCTGAAAATTTGTCGCAGAATATTCCTCGGGATTATGAGAGACGTTCATCCAAAAAAGTAAGAAGACCATGCTCTGAAAACTGTGTGAATTGGATGCAAGTATATACTAATATGTTATCTCACTAGTGATTAAAAATATAACCCACGTGAATATGTTGGTTTTCTCTTGATAAATTATAGTCAACAATTATGACTGTCAACATAAGGGAATTTGCCTCATTTTCTCCATCTGGCATTTACAGGGCTTCGTTAGGTATTGGACTCCAGATATTAAAATATTTTTGAAAGAGCTCTCTCATGCTGAATCTGAAAGGGAGACCTTATTGAAAAGTACATTTCAGAGAATGATAGAGCGTTTTTGTGAACATCACACTCAGTGGAAGCAGTTGGTGTCTGCAACTGCTGGTACGTATGAACCAGTTTTGAAGTACATGCTCTCCCCCATTCACCTTTGCATGATGCCTGTTATTAAAACCTATATTTTTTAAGCTGAAATTAAGTTATCTTTTTCCCCTTTTACCTTGATTCAACTCTTGCATTTCCTTAGGAATTTAATAAGATGAGTTTTTATTCCTTTTAAATATAAAATTGAAGTTTTATCTTTTTACATATCTTAAACTGAATGTTGCATTTACATATTGCAGAGTTGGATGTTTTGATCAATTTAGCTATTGCTAGTGATTACTATGAAGGACCAACATGCAGACCAAGTTTTGTTGGGACCTTATGTACAAATGAAGCTCCCTACATCTATGCTAAAAGTCTAGGACACCCTGTTCTTAGGAGTGACACCTTAGGAAAGAGTGCCTTTGTACCTAATGACATAACCATAGGTGGTCCAGACCAGGCCTCCTTTATTCTTCTTACAGGTCCTAACATGGGTGGGAAGTCAACTCTTCTTCGCCAAGTTTGCTTGGCTGTGATTTTGGCCCAGGTGAACTTTTTAAGCCATGTTACTTTTCTCATTTGATATTTAATTTTTGGCCTGGTGGAGAGAGAAATTACGTGGGAAAAAGGAACCTCATCCCTTTGAGGCTTGTCTTGAGTAAGCTTGTCTTTTTTCTTTGCTGTTATTCATTTTAGTTTCTTACACAGGTAGGGGCTGATGTCCCTTCAGAAAGTTTTGAATTGTCTCCTGTGGACCGAATTTTTGTTCGGATGGGTGCCAGAGATAATATCATGGCTGGCCAAAGTACATTTTTAACCGAGCTTTCAGAAACTGCAACAATGCTGGTAAGATGGTCCTTTGAGTATCACTTCACCTTATATCATGTGTAAGTTCGTATTGGAAAAAAAAAACAAGTCCCCCATTGGATAGATATGACTCCTGATAAGAGTTTATAAAGAGGAGGCACTCCTCACCTTTCAAGCCGGTTTTGTAAGGATGAGTTAGGCCCAAATTTCAACAGTTGGGTTACGCAGGCATTTAACAATAGATGTGTGTATATGATCGACATTTTTCTATATAACTTTTCAAGCAATGACGGCATAGAAGAACAAAGTTTTGCTTTAATTTTTTTTCTTTATAGCTTAGTTGTGTGTGGTTCTGTCGTACTTGGATAGTTGGGTGGGTTTCATGTTTTTGTATCATGAAGCTTTATAAGCCCTACATATGTATTACCTGACCTGATTAAAGTATTTTTTTTTATTCTGATTATGTACTTTTTGATGGTGGATACAGTCATCAGCCACTCGTAATTCATTGGTGGCTCTGGATGAGCTTGGGCGTGGGACCTCAACGTCTGATGGACAAGCCATTGCGTAAGTGTTTGTTTTGGGATTGCAGTTGTTCCCTAGTGGTTTCTGTATTCATGATTGATTTTCTAATTACTGGTGAGTCCATCTCAGATTCTGCTTTGTGCTTTTAAATTTTTGGCAGGGAATCAGTATTAGAACATCTTGTACGTAGCGTGCAGTGTCGTGGATTGTTTTCTACACACTATCATCGATTAGCTATAGATTATCTCAAAGATCCCAAGGTATACCCAGTTTTTTGTAGTGTATAATCATTACTGGTATATTTAATTGTCCTCCAATGCTTGTAAGAATATTTGAATGCTCAAATTTATTTCATTGATGATGTACATGTACTTGACTGCCTGCCTATAAAATCACCAGTCACCTATGTGGATATCATTGCTATATAATTATAAAGTTTAAATTCTAGTGTAGTAATTTGTTCTACCTTCCATTTGGATATCATTGCTATATAATTAGAAAGCTTAAATTCTAGTGTAGTAATTTGTTCTACCTTCCATTTTGCAAGTGTTTTGAGAACATAATTATATTTGAGTTGGCTTTTCTTGCATTTGTTGTAAAGGTCTGTCTCGCTCACATGGCATGCCAAGTTGGTAGTGGAAATGAAGGTTTGGACGAAGTCACCTTTCTTTACAGGCTGTCCGCTGGTACTTGCCCCAAGAGCTACGGTGTTAATGTTGCTCGGTTAGCTGGTATGTTATCTTGTTTTGAACTACTATAAATATTTTCACTTAACATCCAAACATCTGCGTGTTGCATTAATTTTTGGTTCATTAGCCTTGCTTATGTGTAAAGGCTTGTTATTTTATAGCTTAAGCTTGGACTGCCAATCTCACACAATACTGTTTGTTATGAATTTATAAAATCTTGCTATTTTATTTCAGGACTACCCACTTCTGTGCTTCAGAAAGCTGATGCCAAGTCCAGAGAATTCGAGGCCACGTATGGTAAATACAGAACGGTGTCTTCTGAACCAAACTCTTCCAATCAAAGTTGGGTTGATGAGATAATAGTCTTGGTACAAAAATTGAACAATGCTGTTAATAATTTGAGCTGCGAGGAGACTGTTTCCGATCACTCTATAGTGAAGCTTCAGCGTGACGCAAGAAAACTGCTAGCACGGTGTTAA

Protein sequence

>MS.gene28806.t1

MSQRRNSNGRSPLVNPQRQITSFFTKSTSPLSSSPSPSPSLSKTLKPNPNNPIPKPNPNPNPNPSPTLTTPSPLNPRKPHKPRLVIDAPPTISPPPSDSPFIGKRIKVYWPLDEAWYEGTVKSFDSGTSKHRIRYDDDEEECIDLSKEKIEWIQDSSSKKLKRLRRGSSPIRKMVIEENEGEERKSSNKVEPKKRKLGGGAKMEPMKKSKSGNEVNRVAVKLPPLAPLNNLEVRKTSDGADNVATGDASERFALREAQKFHFLGKDRRDAKRRRPGDENYDSRTLYLPPDFVRNLSGGQKQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELELQYMRGEQPHCGFPEKNFSVNVERLARKGYRVLVVEQTETPEQMELRRKENGSKDKVVRREICAVVSKGTLIDGEFMSTNPEAAYLMALTEYRENNPSEMSERTYGVCVVDVATSRVILGQFNDDSECSALCSILSEIRPVEIVKPAKLLSAETERVLLKHTRNPLVNELIPNVEFWDADRTLDHLKRIYGHNNDFSAQDGGLDCLPDVLLELVKTDHDSRSALSALGGALYYLKQAFLDEQLLRFAQFELLPCAVFSGLASKPYMVLDAVALENLEIFENSRNGESSGTLYAQLNQCVTAFGKRLLKSWLARPLYHVESIKERQEAVAGLKGVNLPHTLEFRKALSKLPDMERLLARVLSSRDASGRNANKVVLYEDSSKKQLQEFISALRGLELMAQACLSLGVILNNVKSRQLSHLLTPGKGLPDVSMDLNHFKDAFDWVEANNSGRIIPHEGVDKEYDSACKAVNEIESSLLDHLKEQRKLLGSTSISYVGIGKDTYLLEVPENLSQNIPRDYERRSSKKGFVRYWTPDIKIFLKELSHAESERETLLKSTFQRMIERFCEHHTQWKQLVSATAELDVLINLAIASDYYEGPTCRPSFVGTLCTNEAPYIYAKSLGHPVLRSDTLGKSAFVPNDITIGGPDQASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPSESFELSPVDRIFVRMGARDNIMAGQSTFLTELSETATMLSSATRNSLVALDELGRGTSTSDGQAIAESVLEHLVRSVQCRGLFSTHYHRLAIDYLKDPKVCLAHMACQVGSGNEGLDEVTFLYRLSAGTCPKSYGVNVARLAGLPTSVLQKADAKSREFEATYGKYRTVSSEPNSSNQSWVDEIIVLVQKLNNAVNNLSCEETVSDHSIVKLQRDARKLLARC