AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene25092

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25092.t1 MTR_8g022050 100.000 407 0 0 1 407 21 427 0.0 851
MS.gene25092.t1 MTR_4g124940 71.533 411 100 6 2 407 6 404 0.0 591
MS.gene25092.t1 MTR_3g109090 66.506 415 115 9 14 407 13 424 0.0 550
MS.gene25092.t1 MTR_3g109090 66.506 415 115 9 14 407 29 440 0.0 550
MS.gene25092.t1 MTR_4g131970 29.283 321 200 9 22 333 54 356 8.20e-36 136
MS.gene25092.t1 MTR_4g086600 31.126 302 187 10 38 324 112 407 6.81e-34 131
MS.gene25092.t1 MTR_3g101370 30.952 294 171 10 42 324 93 365 2.06e-33 129
MS.gene25092.t1 MTR_1g020080 30.137 292 175 9 42 324 97 368 3.38e-33 129
MS.gene25092.t1 MTR_1g020080 27.128 188 111 4 35 202 183 364 1.35e-14 75.5
MS.gene25092.t1 MTR_2g022950 30.592 304 181 9 41 333 59 343 3.74e-33 128
MS.gene25092.t1 MTR_2g097960 31.715 309 189 12 41 335 14 314 7.78e-33 128
MS.gene25092.t1 MTR_3g065190 32.500 200 119 5 43 233 26 218 4.83e-28 114
MS.gene25092.t1 MTR_3g101370 34.104 173 104 5 42 204 93 265 5.71e-24 101
MS.gene25092.t1 MTR_6g040190 26.370 292 169 7 43 325 26 280 2.47e-23 102
MS.gene25092.t1 MTR_1g020080 32.558 172 107 5 42 204 97 268 6.46e-23 98.6
MS.gene25092.t1 MTR_2g022950 32.955 176 107 5 41 205 59 234 2.35e-22 96.3
MS.gene25092.t1 MTR_2g022950 25.455 220 119 6 129 341 62 243 9.80e-15 74.3
MS.gene25092.t1 MTR_2g022950 33.143 175 106 5 42 205 60 234 1.08e-21 94.7
MS.gene25092.t1 MTR_2g022950 25.974 231 125 7 128 351 61 252 7.19e-15 75.1
MS.gene25092.t1 MTR_3g102040 27.481 262 148 7 40 292 22 250 1.90e-21 97.1
MS.gene25092.t1 MTR_3g102040 26.490 302 186 10 37 323 103 383 4.71e-16 80.5
MS.gene25092.t1 MTR_4g085540 26.481 287 164 8 43 320 35 283 9.17e-21 95.1
MS.gene25092.t1 MTR_4g085540 28.114 281 167 9 37 302 113 373 1.16e-19 91.7
MS.gene25092.t1 MTR_4g085540 25.134 187 121 3 37 205 208 393 8.17e-13 70.5
MS.gene25092.t1 MTR_1g019150 25.773 291 177 8 26 308 15 274 1.72e-20 94.0
MS.gene25092.t1 MTR_1g019150 26.335 281 173 9 37 302 111 372 9.16e-18 85.9
MS.gene25092.t1 MTR_1g019150 25.824 182 115 4 43 205 212 392 1.30e-12 69.7
MS.gene25092.t1 MTR_7g102730 24.671 304 177 10 32 323 3 266 4.62e-19 89.7
MS.gene25092.t1 MTR_7g102730 26.502 283 169 10 37 302 89 349 1.93e-15 78.6
MS.gene25092.t1 MTR_7g102730 27.108 166 102 3 43 190 190 354 4.63e-12 68.2
MS.gene25092.t1 MTR_6g040070 27.419 310 166 11 37 324 6 278 3.63e-18 87.0
MS.gene25092.t1 MTR_1g097440 25.773 291 168 10 38 316 26 280 3.87e-18 87.0
MS.gene25092.t1 MTR_1g097440 26.948 308 171 10 37 324 109 382 4.17e-18 87.0
MS.gene25092.t1 MTR_1g061870 25.857 321 200 11 43 351 104 398 5.19e-17 83.2
MS.gene25092.t1 MTR_1g061870 24.265 272 160 7 43 303 16 252 7.19e-17 82.8
MS.gene25092.t1 MTR_3g027140 28.729 181 115 2 37 203 55 235 8.62e-16 76.6
MS.gene25092.t1 MTR_3g027140 28.218 202 118 5 122 319 55 233 1.53e-12 67.4
MS.gene25092.t1 MTR_3g075500 29.609 179 114 2 37 203 104 282 3.25e-15 75.9
MS.gene25092.t1 MTR_4g104470 29.944 177 113 3 37 203 117 292 1.86e-14 73.9
MS.gene25092.t1 MTR_4g109540 42.857 77 44 0 129 205 44 120 7.51e-14 71.6
MS.gene25092.t1 MTR_1g080150 35.484 93 57 1 127 216 132 224 2.23e-13 69.7
MS.gene25092.t1 MTR_7g106440 28.095 210 127 4 129 332 111 302 2.23e-13 70.9
MS.gene25092.t1 MTR_7g106440 25.281 178 115 3 44 203 111 288 8.56e-11 63.2
MS.gene25092.t1 MTR_7g013730 39.241 79 48 0 129 207 42 120 2.30e-13 70.1
MS.gene25092.t1 MTR_3g084040 45.333 75 40 1 129 203 38 111 2.64e-13 67.4
MS.gene25092.t1 MTR_3g075500 28.743 167 107 2 37 191 104 270 6.81e-13 68.9
MS.gene25092.t1 MTR_1g064230 27.363 201 117 3 30 203 74 272 8.42e-13 68.9
MS.gene25092.t1 MTR_3g080130 39.024 82 50 0 129 210 38 119 2.51e-12 64.3
MS.gene25092.t1 MTR_4g109540 40.741 81 48 0 125 205 48 128 3.75e-12 66.6
MS.gene25092.t1 MTR_1g045510 25.904 166 117 2 44 203 115 280 6.72e-12 66.2
MS.gene25092.t1 MTR_7g013740 38.158 76 47 0 128 203 41 116 7.74e-12 63.2
MS.gene25092.t1 MTR_7g105260 37.662 77 48 0 127 203 32 108 1.24e-11 62.4
MS.gene25092.t1 MTR_1g056520 24.176 182 124 3 37 204 103 284 1.83e-11 65.1
MS.gene25092.t1 MTR_1g056520 25.521 192 117 3 119 306 100 269 1.87e-11 65.1
MS.gene25092.t1 MTR_3g025880 38.961 77 47 0 129 205 46 122 1.97e-11 65.9
MS.gene25092.t1 MTR_3g084040 48.276 58 30 0 129 186 38 95 2.38e-11 60.5
MS.gene25092.t1 MTR_8g092550 28.230 209 125 8 31 220 190 392 4.31e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25092.t1 AT1G17370 81.955 399 66 2 12 407 24 419 0.0 672
MS.gene25092.t1 AT1G17370 81.454 399 65 3 12 407 24 416 0.0 664
MS.gene25092.t1 AT3G14100 80.250 400 74 2 12 407 29 427 0.0 658
MS.gene25092.t1 AT1G54080 74.817 409 88 4 6 407 26 426 0.0 625
MS.gene25092.t1 AT1G54080 74.092 413 88 5 6 407 26 430 0.0 619
MS.gene25092.t1 AT5G19350 31.058 293 188 8 41 324 23 310 2.78e-36 137
MS.gene25092.t1 AT5G19350 29.934 304 195 8 41 335 23 317 2.25e-35 135
MS.gene25092.t1 AT1G49600 30.743 296 182 11 41 325 118 401 2.16e-34 133
MS.gene25092.t1 AT1G49600 30.847 295 181 11 41 324 118 400 2.27e-34 133
MS.gene25092.t1 AT1G49600 30.847 295 181 11 41 324 118 400 2.27e-34 133
MS.gene25092.t1 AT1G11650 28.882 322 192 9 13 325 42 335 5.97e-34 130
MS.gene25092.t1 AT4G27000 31.058 293 173 9 42 325 80 352 2.02e-33 129
MS.gene25092.t1 AT5G54900 29.966 297 179 9 39 325 57 334 3.73e-33 128
MS.gene25092.t1 AT3G19130 28.814 295 194 8 41 325 107 395 2.26e-32 127
MS.gene25092.t1 AT1G47490 29.630 297 175 10 42 324 101 377 2.05e-30 121
MS.gene25092.t1 AT1G11650 28.767 292 168 8 13 293 42 304 9.70e-30 117
MS.gene25092.t1 AT2G18510 34.000 200 116 5 43 233 26 218 2.37e-28 114
MS.gene25092.t1 AT1G47500 28.956 297 177 10 42 324 103 379 4.78e-27 112
MS.gene25092.t1 AT4G34110 27.636 275 161 6 43 310 37 280 1.12e-23 103
MS.gene25092.t1 AT4G34110 28.383 303 172 10 37 324 115 387 7.06e-21 95.5
MS.gene25092.t1 AT4G34110 25.414 181 116 3 43 205 216 395 1.08e-12 70.1
MS.gene25092.t1 AT3G16380 28.014 282 170 7 43 316 113 369 2.99e-23 102
MS.gene25092.t1 AT3G16380 26.027 292 165 9 43 317 22 279 9.75e-16 79.3
MS.gene25092.t1 AT2G23350 29.964 277 163 8 43 308 135 391 9.80e-23 100
MS.gene25092.t1 AT2G23350 27.076 277 160 7 43 310 47 290 5.89e-19 89.7
MS.gene25092.t1 AT2G23350 25.668 187 120 4 37 205 220 405 1.11e-12 70.1
MS.gene25092.t1 AT1G49760 29.054 296 167 11 37 316 124 392 1.12e-22 100
MS.gene25092.t1 AT1G49760 26.715 277 161 8 43 310 46 289 2.04e-19 90.9
MS.gene25092.t1 AT1G49760 27.072 181 113 3 43 205 225 404 6.62e-14 73.9
MS.gene25092.t1 AT1G49760 29.054 296 167 11 37 316 124 392 1.12e-22 100
MS.gene25092.t1 AT1G49760 26.715 277 161 8 43 310 46 289 2.04e-19 90.9
MS.gene25092.t1 AT1G49760 27.072 181 113 3 43 205 225 404 6.62e-14 73.9
MS.gene25092.t1 AT1G22760 27.273 275 161 6 43 309 50 293 3.60e-22 99.4
MS.gene25092.t1 AT1G22760 26.733 303 179 8 37 324 127 401 2.13e-16 81.6
MS.gene25092.t1 AT1G22760 25.414 181 116 3 43 205 230 409 8.99e-13 70.5
MS.gene25092.t1 AT1G71770 25.275 273 169 6 43 309 60 303 1.04e-21 97.8
MS.gene25092.t1 AT1G71770 29.085 306 168 10 37 324 137 411 1.08e-18 88.6
MS.gene25092.t1 AT1G71770 25.263 190 119 4 43 214 240 424 6.62e-14 73.9
MS.gene25092.t1 AT1G71770 25.275 273 169 6 43 309 60 303 1.04e-21 97.8
MS.gene25092.t1 AT1G71770 29.085 306 168 10 37 324 137 411 1.08e-18 88.6
MS.gene25092.t1 AT1G71770 25.263 190 119 4 43 214 240 424 6.62e-14 73.9
MS.gene25092.t1 AT1G47490 32.571 175 106 6 42 204 101 275 1.57e-20 91.7
MS.gene25092.t1 AT1G34140 26.708 322 201 8 37 342 22 324 6.41e-19 88.6
MS.gene25092.t1 AT1G47500 31.429 175 108 6 42 204 103 277 2.19e-18 85.9
MS.gene25092.t1 AT2G36660 26.335 281 155 8 43 310 25 266 2.77e-18 87.4
MS.gene25092.t1 AT2G36660 25.632 277 177 8 43 310 113 369 3.18e-16 81.3
MS.gene25092.t1 AT4G24770 30.337 178 115 2 37 205 145 322 3.14e-17 82.4
MS.gene25092.t1 AT4G24770 30.337 178 115 2 37 205 145 322 3.14e-17 82.4
MS.gene25092.t1 AT3G52150 32.275 189 110 5 33 203 65 253 6.84e-17 80.5
MS.gene25092.t1 AT3G52150 30.256 195 111 7 129 319 78 251 4.60e-14 72.0
MS.gene25092.t1 AT3G52150 32.275 189 110 5 33 203 65 253 6.84e-17 80.5
MS.gene25092.t1 AT3G52150 30.256 195 111 7 129 319 78 251 4.60e-14 72.0
MS.gene25092.t1 AT2G37220 29.787 188 104 2 44 203 93 280 8.75e-17 80.5
MS.gene25092.t1 AT3G23830 46.753 77 41 0 129 205 37 113 4.24e-15 72.4
MS.gene25092.t1 AT3G23830 46.753 77 41 0 129 205 37 113 4.24e-15 72.4
MS.gene25092.t1 AT3G52380 26.068 234 137 6 129 352 118 325 5.74e-15 75.9
MS.gene25092.t1 AT3G52380 27.523 218 131 7 44 243 118 326 2.09e-13 71.2
MS.gene25092.t1 AT5G50250 30.726 179 114 3 35 203 105 283 6.08e-15 75.1
MS.gene25092.t1 AT4G13860 45.714 70 38 0 129 198 5 74 1.96e-14 68.9
MS.gene25092.t1 AT1G60000 30.000 180 104 5 30 203 90 253 3.50e-14 72.4
MS.gene25092.t1 AT4G13850 45.333 75 41 0 129 203 37 111 1.59e-13 67.8
MS.gene25092.t1 AT4G13850 45.205 73 40 0 129 201 37 109 1.62e-13 68.2
MS.gene25092.t1 AT4G13850 45.205 73 40 0 129 201 37 109 1.99e-13 68.2
MS.gene25092.t1 AT4G13850 45.205 73 40 0 129 201 37 109 2.22e-13 68.2
MS.gene25092.t1 AT4G39260 39.286 84 50 1 127 209 6 89 4.46e-13 65.1
MS.gene25092.t1 AT3G04500 33.684 95 60 1 127 218 137 231 6.33e-13 68.6
MS.gene25092.t1 AT5G04280 43.421 76 43 0 128 203 8 83 3.24e-12 67.4
MS.gene25092.t1 AT5G61030 41.333 75 44 0 129 203 42 116 4.35e-12 67.0
MS.gene25092.t1 AT5G61030 41.333 75 44 0 129 203 42 116 4.35e-12 67.0
MS.gene25092.t1 AT3G53460 45.333 75 41 0 129 203 259 333 8.82e-12 66.2
MS.gene25092.t1 AT3G53460 45.333 75 41 0 129 203 259 333 8.82e-12 66.2
MS.gene25092.t1 AT3G53460 45.333 75 41 0 129 203 259 333 8.82e-12 66.2
MS.gene25092.t1 AT1G74230 44.156 77 42 1 129 205 36 111 8.96e-12 65.9
MS.gene25092.t1 AT3G53460 45.333 75 41 0 129 203 280 354 1.12e-11 66.2
MS.gene25092.t1 AT2G33410 28.571 175 98 5 44 193 8 180 1.25e-11 66.2
MS.gene25092.t1 AT4G39260 38.961 77 47 0 127 203 6 82 1.98e-11 61.6
MS.gene25092.t1 AT1G58470 29.032 186 111 6 127 303 6 179 2.43e-11 65.1
MS.gene25092.t1 AT1G58470 29.032 186 111 6 127 303 6 179 2.43e-11 65.1
MS.gene25092.t1 AT4G14300 28.488 172 98 5 44 191 8 178 3.34e-11 65.1
MS.gene25092.t1 AT4G14300 28.488 172 98 5 44 191 8 178 3.34e-11 65.1
MS.gene25092.t1 AT3G08000 37.805 82 51 0 128 209 42 123 3.95e-11 61.2

Find 121 sgRNAs with CRISPR-Local

Find 379 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTATCCGCAACAGATATTT+TGG 0.201236 8.4:-72305648 MS.gene25092:CDS
CATCGTCATTTCCATGCTCT+TGG 0.280996 8.4:-72306116 MS.gene25092:CDS
TCTCTGTGGCAAAATAATTA+AGG 0.291025 8.4:-72305979 MS.gene25092:intron
CCAATTGCAGCTTGCTTAAG+AGG 0.300686 8.4:+72305551 None:intergenic
GGCAACCTATCAAAGTTAAC+TGG 0.303964 8.4:-72307904 MS.gene25092:CDS
CCTTCCATTGAGAGTTAATA+TGG 0.304042 8.4:+72308009 None:intergenic
GTCCAGCGTGATAAAGGATT+TGG 0.304987 8.4:-72306068 MS.gene25092:CDS
ATCGTCATTTCCATGCTCTT+GGG 0.313391 8.4:-72306115 MS.gene25092:CDS
ACTGGGCGATCAAGGGGATT+TGG 0.334423 8.4:-72307443 MS.gene25092:CDS
AAAAGCTTACACCCTTCAAC+TGG 0.359205 8.4:+72308196 None:intergenic
AGCTGCAATTGGAGCTAGCC+AGG 0.366978 8.4:-72305540 MS.gene25092:CDS
CCTCTTAAGCAAGCTGCAAT+TGG 0.368129 8.4:-72305551 MS.gene25092:CDS
TATGCCCAGTTAACTTTGAT+AGG 0.370081 8.4:+72307899 None:intergenic
GTTCGTGTCCAGCGTGATAA+AGG 0.374267 8.4:-72306074 MS.gene25092:CDS
CACACACTGCGGCAAGTACT+TGG 0.374575 8.4:+72308621 None:intergenic
AGAGGATTTGAAGCAGTTCC+AGG 0.379667 8.4:+72305701 None:intergenic
GTAGACAAATACGCTGCAAC+TGG 0.382099 8.4:-72306944 MS.gene25092:CDS
TACTCATGCTGAGGCAGCTC+TGG 0.384996 8.4:-72306030 MS.gene25092:CDS
CCTGCTGCTGCGCCTCTACC+AGG 0.385593 8.4:-72305671 MS.gene25092:CDS
CATTTCCATGCTCTTGGGGC+TGG 0.386711 8.4:-72306110 MS.gene25092:CDS
GCTGTGCAGCAGCAACATTT+TGG 0.387873 8.4:+72305498 None:intergenic
GTCTGTGCCTTTCAGGTAAG+TGG 0.392351 8.4:-72306974 MS.gene25092:intron
GCGGGTACTGGCCCAGTTGA+AGG 0.395293 8.4:-72308208 MS.gene25092:CDS
CCTGGTAGAGGCGCAGCAGC+AGG 0.402401 8.4:+72305671 None:intergenic
GGCCATTACAACATATTTGT+TGG 0.405771 8.4:-72307759 MS.gene25092:CDS
TGTTCAAATATAGTGCTCTT+GGG 0.408510 8.4:-72305741 MS.gene25092:intron
GTGTTCAAATATAGTGCTCT+TGG 0.414047 8.4:-72305742 MS.gene25092:intron
GGCAAATTTCCACTTGGGAT+TGG 0.418426 8.4:+72308657 None:intergenic
TGCCTTTCAGGTAAGTGGCT+TGG 0.427719 8.4:-72306969 MS.gene25092:intron
CGATCGCAGATCTGCTGCTC+TGG 0.428701 8.4:-72308032 MS.gene25092:CDS
AGAGGCGCAGCAGCAGGTGG+GGG 0.429003 8.4:+72305677 None:intergenic
GAACTAACAAATGGTTCATC+TGG 0.429816 8.4:-72306861 MS.gene25092:intron
TCCAGCGTGATAAAGGATTT+GGG 0.430462 8.4:-72306067 MS.gene25092:CDS
GGTAGAGGCGCAGCAGCAGG+TGG 0.433312 8.4:+72305674 None:intergenic
ATCAGAAGACTGGGCGATCA+AGG 0.435048 8.4:-72307451 MS.gene25092:CDS
CCAAGTGGAAATTTGCCTCC+TGG 0.436571 8.4:-72308651 MS.gene25092:CDS
CGCTGCAACTGGGCAACAAA+AGG 0.437840 8.4:-72306933 MS.gene25092:CDS
TCAATACACAACTGTTTATG+TGG 0.446274 8.4:-72306536 MS.gene25092:CDS
GTGTATTGAGGATTGTTCTC+AGG 0.448950 8.4:+72306550 None:intergenic
ACTGTTTATGTGGGTAACCT+TGG 0.450682 8.4:-72306526 MS.gene25092:CDS
GGGAGCAAGCCCACTCCACC+TGG 0.463873 8.4:-72305719 MS.gene25092:CDS
CTGTTTATGTGGGTAACCTT+GGG 0.467747 8.4:-72306525 MS.gene25092:CDS
CTGGCCATATTAACTCTCAA+TGG 0.478563 8.4:-72308013 MS.gene25092:CDS
GTTATGTGGGATCAGAAGAC+TGG 0.486448 8.4:-72307461 MS.gene25092:CDS
GTGGCTCGGTTACTTGTGTA+TGG 0.493557 8.4:+72308248 None:intergenic
ATGAAGCTTACGAACAACTT+TGG 0.494255 8.4:+72307682 None:intergenic
AACTTCTTGCAGAAGTGGCT+CGG 0.499016 8.4:+72308234 None:intergenic
GGTCAGAGAGAGGATACATC+AGG 0.501078 8.4:-72307869 MS.gene25092:intron
AACTGGGCAACAAAAGGTGC+TGG 0.502538 8.4:-72306927 MS.gene25092:CDS
GGCAGCTCTGGCAATTCAGA+TGG 0.502691 8.4:-72306018 MS.gene25092:CDS
CCAGGAGGCAAATTTCCACT+TGG 0.505891 8.4:+72308651 None:intergenic
TCTTGGGGCTGGTGTGATAG+AGG 0.507053 8.4:-72306099 MS.gene25092:CDS
CACCAACAAATATGTTGTAA+TGG 0.507913 8.4:+72307757 None:intergenic
CGGGTACTGGCCCAGTTGAA+GGG 0.510220 8.4:-72308207 MS.gene25092:CDS
CCAAAATATCTGTTGCGGAT+AGG 0.514090 8.4:+72305648 None:intergenic
TGTTTCATTCCGTAGCCAGC+AGG 0.516705 8.4:-72307417 MS.gene25092:intron
ACATAAACAGTTGTGTATTG+AGG 0.517017 8.4:+72306538 None:intergenic
ATATCTGTTGCGGATAGGCC+TGG 0.519370 8.4:+72305653 None:intergenic
TAGAGATGCAAGAGTTATGT+GGG 0.520268 8.4:-72307474 MS.gene25092:CDS
TTAGAGATGCAAGAGTTATG+TGG 0.526961 8.4:-72307475 MS.gene25092:intron
TCAGAAGACTGGGCGATCAA+GGG 0.527570 8.4:-72307450 MS.gene25092:CDS
TAGAGGCGCAGCAGCAGGTG+GGG 0.531472 8.4:+72305676 None:intergenic
CAGCTAGCAATGAGCAAGAT+GGG 0.532413 8.4:-72305614 MS.gene25092:CDS
GAAGCAGTTCCAGGTGGAGT+GGG 0.535669 8.4:+72305710 None:intergenic
CAGGAGGCAAATTTCCACTT+GGG 0.537949 8.4:+72308652 None:intergenic
TGGTCTCTTAGCTCCACCTC+AGG 0.539491 8.4:-72310628 MS.gene25092:intron
GCAGCTAGCAATGAGCAAGA+TGG 0.547662 8.4:-72305615 MS.gene25092:CDS
TCGTCATTTCCATGCTCTTG+GGG 0.548558 8.4:-72306114 MS.gene25092:CDS
ACCCACCGTCGTATATCGCC+TGG 0.548862 8.4:+72305522 None:intergenic
TGAAGCAGTTCCAGGTGGAG+TGG 0.549578 8.4:+72305709 None:intergenic
GTTCAAATATAGTGCTCTTG+GGG 0.552630 8.4:-72305740 MS.gene25092:intron
AGTGTGGTGGAACTAACAAA+TGG 0.554047 8.4:-72306870 MS.gene25092:CDS
GTAGAGGCGCAGCAGCAGGT+GGG 0.554923 8.4:+72305675 None:intergenic
GTTGCGGATAGGCCTGGTAG+AGG 0.555251 8.4:+72305659 None:intergenic
TGTATCCTCTCTCTGACCAC+TGG 0.563870 8.4:+72307874 None:intergenic
TTAAGAGGATGCTGTGCTTG+AGG 0.565759 8.4:+72305566 None:intergenic
TCACACCAGCCCCAAGAGCA+TGG 0.567987 8.4:+72306105 None:intergenic
TGTTGGTGACCTCAGTCCTG+AGG 0.574357 8.4:-72307742 MS.gene25092:CDS
TGTGAGAAAATGCAGGTATG+TGG 0.574705 8.4:-72308278 MS.gene25092:intron
CAGAAGACTGGGCGATCAAG+GGG 0.575925 8.4:-72307449 MS.gene25092:CDS
GAATAGGGACCAACCTGAGG+TGG 0.581351 8.4:+72310615 None:intergenic
TGTGGGTAACCTTGGGTCGG+AGG 0.581624 8.4:-72306518 MS.gene25092:intron
CCATATTAACTCTCAATGGA+AGG 0.584606 8.4:-72308009 MS.gene25092:CDS
TGAGGTGGAGCTAAGAGACC+AGG 0.584784 8.4:+72310630 None:intergenic
AGTGCTATAAATGATTTGAC+CGG 0.585401 8.4:-72307299 MS.gene25092:intron
GCATGCGAAAAGTGTAGCAT+CGG 0.586459 8.4:+72307716 None:intergenic
AGTGTAGCATCGGTAACCTC+AGG 0.587772 8.4:+72307726 None:intergenic
TTATGTGGGTAACCTTGGGT+CGG 0.588868 8.4:-72306521 MS.gene25092:CDS
CAAGTACTTGGATCAAAACC+AGG 0.592915 8.4:+72308633 None:intergenic
ACCCAAATCCTTTATCACGC+TGG 0.596264 8.4:+72306066 None:intergenic
GCAGCTCTGGCAATTCAGAT+GGG 0.613986 8.4:-72306017 MS.gene25092:CDS
CAGATTGAACCAATCCCAAG+TGG 0.614650 8.4:-72308666 MS.gene25092:CDS
TTTGCCACAGAGATAAGACT+GGG 0.619779 8.4:+72305989 None:intergenic
GGATTTGAAGCAGTTCCAGG+TGG 0.620256 8.4:+72305704 None:intergenic
GTATGCCAAAATATCTGTTG+CGG 0.625088 8.4:+72305643 None:intergenic
TAGACAAATACGCTGCAACT+GGG 0.625372 8.4:-72306943 MS.gene25092:CDS
GCAACCTATCAAAGTTAACT+GGG 0.627335 8.4:-72307903 MS.gene25092:CDS
CAATACACAACTGTTTATGT+GGG 0.627906 8.4:-72306535 MS.gene25092:CDS
CAAGAGCATGGAAATGACGA+TGG 0.630427 8.4:+72306117 None:intergenic
TTATGTGGGATCAGAAGACT+GGG 0.632262 8.4:-72307460 MS.gene25092:CDS
CTCGGACAGTAAAAGTGTGG+TGG 0.632747 8.4:-72306883 MS.gene25092:CDS
AGTTTCTTACCTCCGACCCA+AGG 0.634040 8.4:+72306509 None:intergenic
TATTGAAGAGAAGCAAAACT+CGG 0.637066 8.4:-72306901 MS.gene25092:CDS
AAAGCTTACACCCTTCAACT+GGG 0.638369 8.4:+72308197 None:intergenic
GTGAGAAAATGCAGGTATGT+GGG 0.639135 8.4:-72308277 MS.gene25092:intron
GCCAGGCGATATACGACGGT+GGG 0.639764 8.4:-72305523 MS.gene25092:CDS
ATATGCCAGTGGTCAGAGAG+AGG 0.645760 8.4:-72307879 MS.gene25092:CDS
GAGATATAGTACTCATGCTG+AGG 0.660148 8.4:-72306039 MS.gene25092:CDS
CTAGCAATGAGCAAGATGGG+TGG 0.664649 8.4:-72305611 MS.gene25092:CDS
TGGGCAACAAAAGGTGCTGG+CGG 0.665006 8.4:-72306924 MS.gene25092:CDS
TTCAAATATAGTGCTCTTGG+GGG 0.666129 8.4:-72305739 MS.gene25092:intron
CAACAATCTCTCTATCACCC+TGG 0.672833 8.4:-72310648 MS.gene25092:CDS
AAACTCGGACAGTAAAAGTG+TGG 0.685436 8.4:-72306886 MS.gene25092:CDS
CATCGGTAACCTCAGGACTG+AGG 0.688396 8.4:+72307733 None:intergenic
GAGGTGGAGCTAAGAGACCA+GGG 0.691045 8.4:+72310631 None:intergenic
GTTAACTGGGCATATGCCAG+TGG 0.699312 8.4:-72307890 MS.gene25092:CDS
AATGCCCAGTCTTATCTCTG+TGG 0.700945 8.4:-72305993 MS.gene25092:CDS
AGCCAGGCGATATACGACGG+TGG 0.723213 8.4:-72305524 MS.gene25092:CDS
GCTAGCCAGGCGATATACGA+CGG 0.738610 8.4:-72305527 MS.gene25092:CDS
TAGACAAAACTCACACACTG+CGG 0.742849 8.4:+72308610 None:intergenic
GTACTTGGATCAAAACCAGG+AGG 0.749205 8.4:+72308636 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCAATTTAATAAGAAAATT+GGG - chr8.4:72305692-72305711 MS.gene25092:CDS 10.0%
!!! AAAAAAATTGAATTTTATAG+TGG - chr8.4:72305877-72305896 MS.gene25092:intron 10.0%
!!! AAAAAATTGAATTTTATAGT+GGG - chr8.4:72305878-72305897 MS.gene25092:intron 10.0%
!!! AAAAAATTGAATTTTTTTAG+TGG - chr8.4:72305754-72305773 MS.gene25092:intron 10.0%
!!! AAAAATTGAATTTTTTTAGT+GGG - chr8.4:72305755-72305774 MS.gene25092:intron 10.0%
!!! AAAATTGATTTTTTATTTAG+TGG - chr8.4:72305796-72305815 MS.gene25092:intron 10.0%
!!! AAATTGATTTTTTATTTAGT+GGG - chr8.4:72305797-72305816 MS.gene25092:intron 10.0%
!!! CTTTTAAAATAATTAAACAT+AGG + chr8.4:72309041-72309060 None:intergenic 10.0%
!! AATAACATTTAGATTCATAA+AGG + chr8.4:72306742-72306761 None:intergenic 15.0%
!! AATCATAAAACAAAAGAAAA+GGG + chr8.4:72307607-72307626 None:intergenic 15.0%
!! AATCTTCATTTATTCAAAAT+GGG - chr8.4:72308550-72308569 MS.gene25092:intron 15.0%
!! ACATATATTGTAAAATCAAA+AGG + chr8.4:72309907-72309926 None:intergenic 15.0%
!! ATAAAACAAAAAGCTAAAAT+AGG + chr8.4:72309821-72309840 None:intergenic 15.0%
!! ATAACATTTAGATTCATAAA+GGG + chr8.4:72306741-72306760 None:intergenic 15.0%
!! CTTCAATTTAATAAGAAAAT+TGG - chr8.4:72305691-72305710 MS.gene25092:CDS 15.0%
!! TAATTGGCTAAAATAAAATA+AGG + chr8.4:72308906-72308925 None:intergenic 15.0%
!! TATGCTGAAAAAAAATATAT+AGG + chr8.4:72309081-72309100 None:intergenic 15.0%
!! TCAATTTAATAAGAAAATTG+GGG - chr8.4:72305693-72305712 MS.gene25092:CDS 15.0%
!! TTAACTCATACAAAAAATAA+TGG + chr8.4:72305955-72305974 None:intergenic 15.0%
!! TTGATTATAAAATTGTTCAT+GGG + chr8.4:72307110-72307129 None:intergenic 15.0%
!!! AAAATCTTAATTTGTGTTTT+GGG - chr8.4:72308773-72308792 MS.gene25092:intron 15.0%
!!! ATTATTTTTTGTATGAGTTA+AGG - chr8.4:72305954-72305973 MS.gene25092:intron 15.0%
!!! TAAAATCTTAATTTGTGTTT+TGG - chr8.4:72308772-72308791 MS.gene25092:intron 15.0%
!!! TATATCTATTTTTCAATCTA+TGG - chr8.4:72309672-72309691 MS.gene25092:intron 15.0%
!!! TATATTTTTTGTCATTTTGT+AGG - chr8.4:72308823-72308842 MS.gene25092:intron 15.0%
!!! TATTTTAGCCAATTATAATT+TGG - chr8.4:72308911-72308930 MS.gene25092:intron 15.0%
!!! TATTTTTACTAAGAAATCAT+AGG + chr8.4:72308500-72308519 None:intergenic 15.0%
!!! TGATGAAAAAAATTGAATTT+TGG - chr8.4:72305911-72305930 MS.gene25092:intron 15.0%
!!! TTTGCATTTTTTGTTTATTA+GGG - chr8.4:72305613-72305632 MS.gene25092:CDS 15.0%
!! AAAATAGTTCAGTACTTTAA+AGG + chr8.4:72306651-72306670 None:intergenic 20.0%
!! AAGAAAAGATGAAAAGAAAA+AGG + chr8.4:72307434-72307453 None:intergenic 20.0%
!! AAGGTAAAAAAGAAGAAAAA+AGG + chr8.4:72307458-72307477 None:intergenic 20.0%
!! ACAAATATTCAATCTTGATT+TGG - chr8.4:72307406-72307425 MS.gene25092:intron 20.0%
!! AGAAAAGATGAAAAGAAAAA+GGG + chr8.4:72307433-72307452 None:intergenic 20.0%
!! ATGAATCTAAATGTTATTAG+AGG - chr8.4:72306744-72306763 MS.gene25092:intron 20.0%
!! ATTTACTAACGAAAAATCAA+TGG + chr8.4:72308945-72308964 None:intergenic 20.0%
!! CAATCATAAAACAAAAGAAA+AGG + chr8.4:72307608-72307627 None:intergenic 20.0%
!! CAATCTTCATTTATTCAAAA+TGG - chr8.4:72308549-72308568 MS.gene25092:intron 20.0%
!! CCAATTCCAAATATATAAAA+TGG + chr8.4:72308527-72308546 None:intergenic 20.0%
!! CTTTATTCATGAATTTGATT+TGG - chr8.4:72310360-72310379 MS.gene25092:intron 20.0%
!! GATCAATAAGATTGAATAAA+AGG + chr8.4:72307580-72307599 None:intergenic 20.0%
!! GTTGATTATAAAATTGTTCA+TGG + chr8.4:72307111-72307130 None:intergenic 20.0%
!! TTAATACATCTCTAACATAA+TGG + chr8.4:72309862-72309881 None:intergenic 20.0%
!! TTAATCACCTAAAAATCATT+AGG + chr8.4:72309455-72309474 None:intergenic 20.0%
!! TTATTCCATATATGTGATAA+TGG - chr8.4:72308587-72308606 MS.gene25092:intron 20.0%
!! TTCGATTTAAAAATAGATCT+GGG - chr8.4:72309391-72309410 MS.gene25092:intron 20.0%
!! TTGCAAGATATAATAAACTT+AGG + chr8.4:72307721-72307740 None:intergenic 20.0%
!! TTTCGATTTAAAAATAGATC+TGG - chr8.4:72309390-72309409 MS.gene25092:intron 20.0%
!!! AAATCTTAATTTGTGTTTTG+GGG - chr8.4:72308774-72308793 MS.gene25092:intron 20.0%
!!! AATTTTTTTTAGTGGGTATT+TGG - chr8.4:72305844-72305863 MS.gene25092:intron 20.0%
!!! AGACTTTTCCAAATTATAAT+TGG + chr8.4:72308922-72308941 None:intergenic 20.0%
!!! ATATGTTTCTTTGAATTTTC+AGG - chr8.4:72308373-72308392 MS.gene25092:intron 20.0%
!!! ATGTTTTGAACAAATCATTT+TGG - chr8.4:72308335-72308354 MS.gene25092:intron 20.0%
!!! CATTTTCATTTTCTTCTATT+AGG - chr8.4:72307264-72307283 MS.gene25092:intron 20.0%
!!! CCATTTTATATATTTGGAAT+TGG - chr8.4:72308524-72308543 MS.gene25092:intron 20.0%
!!! CTTTGCATTTTTTGTTTATT+AGG - chr8.4:72305612-72305631 MS.gene25092:CDS 20.0%
!!! TAGCATCCATTTTATATATT+TGG - chr8.4:72308518-72308537 MS.gene25092:intron 20.0%
!!! TCATACAAAAAATAATGGAA+TGG + chr8.4:72305950-72305969 None:intergenic 20.0%
!!! TTAAGGTTGTTAATTTTTCT+GGG - chr8.4:72305971-72305990 MS.gene25092:intron 20.0%
!!! TTTTTTGTCTGTTATTGTTT+TGG - chr8.4:72307312-72307331 MS.gene25092:intron 20.0%
! AAAAACTAAACTACAACAGT+AGG + chr8.4:72307206-72307225 None:intergenic 25.0%
! AAAGGTCGTAATGATTAAAA+TGG + chr8.4:72309986-72310005 None:intergenic 25.0%
! AACCATTCTATTATTGTTTC+AGG + chr8.4:72309339-72309358 None:intergenic 25.0%
! AAGAGAAGAAACAAACAATT+AGG + chr8.4:72307828-72307847 None:intergenic 25.0%
! AATAAGAAAATTGGGGTAAT+GGG - chr8.4:72305700-72305719 MS.gene25092:CDS 25.0%
! AGGAAAAACAAAAATCCTAT+GGG + chr8.4:72307186-72307205 None:intergenic 25.0%
! AGTTCTTCTATAATTGTGTT+AGG - chr8.4:72308180-72308199 MS.gene25092:intron 25.0%
! ATAAGCTTGCAATTGATATA+TGG - chr8.4:72306256-72306275 MS.gene25092:intron 25.0%
! ATTTAGTAATATGATGTGGT+TGG - chr8.4:72306166-72306185 MS.gene25092:intron 25.0%
! CATCATATTACTAAATAGAC+TGG + chr8.4:72306162-72306181 None:intergenic 25.0%
! GAAAAGATGAAAAGAAAAAG+GGG + chr8.4:72307432-72307451 None:intergenic 25.0%
! GTCTATTTAGTAATATGATG+TGG - chr8.4:72306162-72306181 MS.gene25092:intron 25.0%
! TAATAAGAAAATTGGGGTAA+TGG - chr8.4:72305699-72305718 MS.gene25092:CDS 25.0%
! TAGGAAAAACAAAAATCCTA+TGG + chr8.4:72307187-72307206 None:intergenic 25.0%
! TATATATATGAAAGCTCACT+TGG - chr8.4:72306097-72306116 MS.gene25092:CDS 25.0%
! TATTATTGTTTCAGGAACTA+CGG + chr8.4:72309331-72309350 None:intergenic 25.0%
! TCGATTTAAAAATAGATCTG+GGG - chr8.4:72309392-72309411 MS.gene25092:intron 25.0%
! TTCCTGAAACAATAATAGAA+TGG - chr8.4:72309334-72309353 MS.gene25092:intron 25.0%
! TTTATTCTCCATTTCTACTT+TGG - chr8.4:72309836-72309855 MS.gene25092:intron 25.0%
!! AATTCAATGGTTTGTAGATT+CGG - chr8.4:72308227-72308246 MS.gene25092:CDS 25.0%
!! AGGAATACAAATATTGGTTA+TGG + chr8.4:72309795-72309814 None:intergenic 25.0%
!! ATAATTGTGTTAGGTTAGTT+TGG - chr8.4:72308189-72308208 MS.gene25092:CDS 25.0%
!! ATTATTTTCACTTATGATCG+AGG - chr8.4:72309142-72309161 MS.gene25092:intron 25.0%
!! CACTAACTTTATCTTTTTGA+TGG - chr8.4:72308653-72308672 MS.gene25092:CDS 25.0%
!! GTTAAGGTTGTTAATTTTTC+TGG - chr8.4:72305970-72305989 MS.gene25092:intron 25.0%
!!! AATTTTTTTCCTTTTTGTGC+TGG - chr8.4:72306224-72306243 MS.gene25092:intron 25.0%
!!! ATTTTAATCATTACGACCTT+TGG - chr8.4:72309985-72310004 MS.gene25092:intron 25.0%
!!! ATTTTAGATAACTTGTCCTT+GGG - chr8.4:72307005-72307024 MS.gene25092:intron 25.0%
!!! ATTTTTTATTTAGTGGGTGT+TGG - chr8.4:72305803-72305822 MS.gene25092:intron 25.0%
!!! TAATGGGTTTGATTTTTAGT+GGG - chr8.4:72305716-72305735 MS.gene25092:CDS 25.0%
!!! TATTTTAGATAACTTGTCCT+TGG - chr8.4:72307004-72307023 MS.gene25092:intron 25.0%
!!! TTTAGTTTGTATTCAAACTG+TGG - chr8.4:72306404-72306423 MS.gene25092:intron 25.0%
!!! TTTAGTTTGTGATCAATATG+TGG - chr8.4:72306462-72306481 MS.gene25092:intron 25.0%
!!! TTTAGTTTTTATTCGAACTG+TGG - chr8.4:72307216-72307235 MS.gene25092:intron 25.0%
!!! TTTTTGAGTGGAAAGTAAAA+GGG - chr8.4:72306973-72306992 MS.gene25092:intron 25.0%
!!! TTTTTTATTTAGTGGGTGTT+GGG - chr8.4:72305804-72305823 MS.gene25092:intron 25.0%
AAACCATATTCTCAGTTCAA+AGG - chr8.4:72308974-72308993 MS.gene25092:intron 30.0%
AACATTAACTAGAGTGAATG+GGG + chr8.4:72307355-72307374 None:intergenic 30.0%
AACCCCATTAAGTCATATTA+GGG - chr8.4:72306565-72306584 MS.gene25092:CDS 30.0%
AAGAAAACATAACTCCTATC+TGG + chr8.4:72306374-72306393 None:intergenic 30.0%
AAGAAAATGAAAATGAGTCC+AGG + chr8.4:72307259-72307278 None:intergenic 30.0%
AATATGTGGTATTGTTTCCT+TGG - chr8.4:72306476-72306495 MS.gene25092:intron 30.0%
ACATAAACAGTTGTGTATTG+AGG + chr8.4:72309618-72309637 None:intergenic 30.0%
ACCTAAAAATCATTAGGTCA+AGG + chr8.4:72309449-72309468 None:intergenic 30.0%
AGAAAATGAAAATGAGTCCA+GGG + chr8.4:72307258-72307277 None:intergenic 30.0%
AGGTGAAGGAATACAAATAT+TGG + chr8.4:72309801-72309820 None:intergenic 30.0%
AGTGCTATAAATGATTTGAC+CGG - chr8.4:72308854-72308873 MS.gene25092:intron 30.0%
ATATGGTATTGTTTCCTTTG+AGG - chr8.4:72306273-72306292 MS.gene25092:intron 30.0%
ATGAGAGAGTGAAAATACAA+GGG - chr8.4:72306942-72306961 MS.gene25092:CDS 30.0%
ATGCACCATTATCACATATA+TGG + chr8.4:72308595-72308614 None:intergenic 30.0%
CAAAAAGCTAAAATAGGTGA+AGG + chr8.4:72309815-72309834 None:intergenic 30.0%
CAAGAAGTAACATACAGTAA+TGG + chr8.4:72307772-72307791 None:intergenic 30.0%
CAATACACAACTGTTTATGT+GGG - chr8.4:72309618-72309637 MS.gene25092:intron 30.0%
CACCAACAAATATGTTGTAA+TGG + chr8.4:72308399-72308418 None:intergenic 30.0%
CCTAAAAATCATTAGGTCAA+GGG + chr8.4:72309448-72309467 None:intergenic 30.0%
CGATTTAAAAATAGATCTGG+GGG - chr8.4:72309393-72309412 MS.gene25092:intron 30.0%
GAAATGAATCTACATGGTTT+AGG - chr8.4:72306511-72306530 MS.gene25092:intron 30.0%
GAACATTAACTAGAGTGAAT+GGG + chr8.4:72307356-72307375 None:intergenic 30.0%
GCATCATAGAATAATAAGCT+TGG + chr8.4:72309742-72309761 None:intergenic 30.0%
TAAGCTTGGAAAATCATCAA+TGG + chr8.4:72309728-72309747 None:intergenic 30.0%
TATAAAATTGTTCATGGGAC+AGG + chr8.4:72307105-72307124 None:intergenic 30.0%
TATCAATACAGTATAGCATG+AGG + chr8.4:72307378-72307397 None:intergenic 30.0%
TATGAGAGAGTGAAAATACA+AGG - chr8.4:72306941-72306960 MS.gene25092:CDS 30.0%
TATTGAAGAGAAGCAAAACT+CGG - chr8.4:72309252-72309271 MS.gene25092:intron 30.0%
TCAATACACAACTGTTTATG+TGG - chr8.4:72309617-72309636 MS.gene25092:intron 30.0%
TCTCTGTGGCAAAATAATTA+AGG - chr8.4:72310174-72310193 MS.gene25092:intron 30.0%
TGCATACTAAACAACTTTGT+TGG - chr8.4:72308615-72308634 MS.gene25092:intron 30.0%
TGTTCAAATATAGTGCTCTT+GGG - chr8.4:72310412-72310431 MS.gene25092:intron 30.0%
TTACACTCAGTTCAATTCAA+TGG - chr8.4:72308214-72308233 MS.gene25092:CDS 30.0%
TTGAACACAATAATAGTCAG+AGG + chr8.4:72310399-72310418 None:intergenic 30.0%
TTTATGCTGAATATTGTGTG+AGG - chr8.4:72310264-72310283 MS.gene25092:intron 30.0%
TTTGAACAAAACAGTTCATC+TGG - chr8.4:72309695-72309714 MS.gene25092:intron 30.0%
! AAATATTGGTTATGGACCAA+TGG + chr8.4:72309787-72309806 None:intergenic 30.0%
! AATATTGGTTATGGACCAAT+GGG + chr8.4:72309786-72309805 None:intergenic 30.0%
! ATTCAATGGTTTGTAGATTC+GGG - chr8.4:72308228-72308247 MS.gene25092:CDS 30.0%
! TTTCCCTTTTGCAAATCAAA+CGG + chr8.4:72306592-72306611 None:intergenic 30.0%
! TTTTTATTCGAACTGTGGAT+GGG - chr8.4:72307221-72307240 MS.gene25092:intron 30.0%
!! AAACACTTTTTATCCTACAG+AGG - chr8.4:72309551-72309570 MS.gene25092:intron 30.0%
!! GTTTGATTTGCAGAAAGTAA+GGG + chr8.4:72307162-72307181 None:intergenic 30.0%
!! TAAGCTTTTTAGGAAAGAGA+AGG - chr8.4:72307971-72307990 MS.gene25092:intron 30.0%
!! TGTTTGATTTGCAGAAAGTA+AGG + chr8.4:72307163-72307182 None:intergenic 30.0%
!!! CTGAGAATATGGTTTTGTTT+CGG + chr8.4:72308969-72308988 None:intergenic 30.0%
!!! GGTAAAGAAGCATTTTTTGT+AGG - chr8.4:72306118-72306137 MS.gene25092:CDS 30.0%
!!! GTAATGGGTTTGATTTTTAG+TGG - chr8.4:72305715-72305734 MS.gene25092:CDS 30.0%
!!! GTTTTTGAGTGGAAAGTAAA+AGG - chr8.4:72306972-72306991 MS.gene25092:intron 30.0%
!!! TGAATTTTATAGTGGGTAGT+TGG - chr8.4:72305885-72305904 MS.gene25092:intron 30.0%
!!! TGGAAAGTAAAAGGGTATTT+TGG - chr8.4:72306981-72307000 MS.gene25092:intron 30.0%
!!! TTTGATTTTTAGTGGGTGTT+TGG - chr8.4:72305723-72305742 MS.gene25092:CDS 30.0%
!!! TTTTTCAGCATATTGACTTC+TGG - chr8.4:72309089-72309108 MS.gene25092:intron 30.0%
AAGCATGTCAATTGTCAATG+TGG + chr8.4:72310303-72310322 None:intergenic 35.0%
ACTCCTTTGAACTGAGAATA+TGG + chr8.4:72308980-72308999 None:intergenic 35.0%
AGAAAGAGATTGTAGAGAGT+CGG - chr8.4:72306767-72306786 MS.gene25092:intron 35.0%
AGAGAAGATGATCGAAGAAA+TGG + chr8.4:72305568-72305587 None:intergenic 35.0%
AGTTGGGAAATGAATCTACA+TGG - chr8.4:72306505-72306524 MS.gene25092:intron 35.0%
ATAGTCAGAGGCAATAAGAT+CGG + chr8.4:72310387-72310406 None:intergenic 35.0%
ATGAAGCTTACGAACAACTT+TGG + chr8.4:72308474-72308493 None:intergenic 35.0%
ATGGTTTAATGCAACAGAAC+TGG + chr8.4:72307753-72307772 None:intergenic 35.0%
ATTAGGTCAAGGGTAAAAAG+AGG + chr8.4:72309438-72309457 None:intergenic 35.0%
CATAATGGCCAAAGTAGAAA+TGG + chr8.4:72309847-72309866 None:intergenic 35.0%
CATCAAAACTTCAGTTGTTC+TGG + chr8.4:72307133-72307152 None:intergenic 35.0%
CATGACTTAGAGTTAATGTC+TGG - chr8.4:72306317-72306336 MS.gene25092:intron 35.0%
CCATATTAACTCTCAATGGA+AGG - chr8.4:72308144-72308163 MS.gene25092:intron 35.0%
CCTTCCATTGAGAGTTAATA+TGG + chr8.4:72308147-72308166 None:intergenic 35.0%
CGAAGAAATGGAGATGAATA+GGG + chr8.4:72305556-72305575 None:intergenic 35.0%
CTGTTGTCTTAGTTAACAGA+TGG - chr8.4:72309507-72309526 MS.gene25092:intron 35.0%
CTTTATCTGTGAGAAAATGC+AGG - chr8.4:72307868-72307887 MS.gene25092:intron 35.0%
GAACCCCATTAAGTCATATT+AGG - chr8.4:72306564-72306583 MS.gene25092:CDS 35.0%
GAACTAACAAATGGTTCATC+TGG - chr8.4:72309292-72309311 MS.gene25092:intron 35.0%
GACATTAACTCTAAGTCATG+CGG + chr8.4:72306317-72306336 None:intergenic 35.0%
GACCCTAATATGACTTAATG+GGG + chr8.4:72306570-72306589 None:intergenic 35.0%
GCAACCTATCAAAGTTAACT+GGG - chr8.4:72308250-72308269 MS.gene25092:CDS 35.0%
GGAACATTAACTAGAGTGAA+TGG + chr8.4:72307357-72307376 None:intergenic 35.0%
GGACCCTAATATGACTTAAT+GGG + chr8.4:72306571-72306590 None:intergenic 35.0%
GGCCATTACAACATATTTGT+TGG - chr8.4:72308394-72308413 MS.gene25092:intron 35.0%
GTATGCCAAAATATCTGTTG+CGG + chr8.4:72310513-72310532 None:intergenic 35.0%
GTCAATGACAAGTTTCTTAC+CGG + chr8.4:72308876-72308895 None:intergenic 35.0%
GTGTTCAAATATAGTGCTCT+TGG - chr8.4:72310411-72310430 MS.gene25092:intron 35.0%
GTTCAAATATAGTGCTCTTG+GGG - chr8.4:72310413-72310432 MS.gene25092:intron 35.0%
GTTCAATCTGCAAAACGAAA+AGG + chr8.4:72307477-72307496 None:intergenic 35.0%
TAAGACAAAAATAGACCTGC+TGG + chr8.4:72308754-72308773 None:intergenic 35.0%
TAGAGATGCAAGAGTTATGT+GGG - chr8.4:72308679-72308698 MS.gene25092:intron 35.0%
TATGATTGTGAGACAAGCTT+AGG - chr8.4:72307620-72307639 MS.gene25092:intron 35.0%
TATGCCCAGTTAACTTTGAT+AGG + chr8.4:72308257-72308276 None:intergenic 35.0%
TCGAAGAAATGGAGATGAAT+AGG + chr8.4:72305557-72305576 None:intergenic 35.0%
TTAGAGATGCAAGAGTTATG+TGG - chr8.4:72308678-72308697 MS.gene25092:intron 35.0%
TTCAAATATAGTGCTCTTGG+GGG - chr8.4:72310414-72310433 MS.gene25092:intron 35.0%
! ACTATTTGTACCGTTTTGTC+CGG + chr8.4:72306618-72306637 None:intergenic 35.0%
! ACTTCTGCAAGAAGTTTTTG+CGG - chr8.4:72307926-72307945 MS.gene25092:intron 35.0%
! ACTTTTTATCCTACAGAGGA+CGG - chr8.4:72309555-72309574 MS.gene25092:intron 35.0%
! ATTTGCAAAAGGGAAAGTAC+CGG - chr8.4:72306596-72306615 MS.gene25092:intron 35.0%
! CATGAATCTGAACTTTTGTC+CGG - chr8.4:72307059-72307078 MS.gene25092:intron 35.0%
! CCCTTGACCTAATGATTTTT+AGG - chr8.4:72309445-72309464 MS.gene25092:intron 35.0%
! GGGTTTTCATCAATTGAGTA+GGG - chr8.4:72305991-72306010 MS.gene25092:CDS 35.0%
! GGTTTTCATCAATTGAGTAG+GGG - chr8.4:72305992-72306011 MS.gene25092:CDS 35.0%
! GTTTTTATTCGAACTGTGGA+TGG - chr8.4:72307220-72307239 MS.gene25092:intron 35.0%
! TCTCTTTTGCAGTCATCTTA+TGG - chr8.4:72308083-72308102 MS.gene25092:intron 35.0%
! TGAATTTGACTTTGCCAGAT+AGG - chr8.4:72306357-72306376 MS.gene25092:intron 35.0%
! TGGGTTTTCATCAATTGAGT+AGG - chr8.4:72305990-72306009 MS.gene25092:CDS 35.0%
! TGTGTGTTTGAAGTGTGAAA+TGG - chr8.4:72306044-72306063 MS.gene25092:CDS 35.0%
!! AAACAACTTTGTTGGTGACT+TGG - chr8.4:72308623-72308642 MS.gene25092:intron 35.0%
!! CTGTATCTTTGAAATCTGTG+CGG - chr8.4:72309948-72309967 MS.gene25092:intron 35.0%
!! GGTTGGTGTTAATGTAACTA+TGG - chr8.4:72306183-72306202 MS.gene25092:intron 35.0%
!! GTTTCCTTTGAGGTTTAGTT+GGG - chr8.4:72306283-72306302 MS.gene25092:intron 35.0%
!! TGTTTCCTTTGAGGTTTAGT+TGG - chr8.4:72306282-72306301 MS.gene25092:intron 35.0%
!! TTGAAGGGTGTAAGCTTTTT+AGG - chr8.4:72307961-72307980 MS.gene25092:intron 35.0%
AAAAGCTTACACCCTTCAAC+TGG + chr8.4:72307960-72307979 None:intergenic 40.0%
AAACTCGGACAGTAAAAGTG+TGG - chr8.4:72309267-72309286 MS.gene25092:intron 40.0%
AAACTGTGGATGTGTTGTGT+TGG - chr8.4:72306418-72306437 MS.gene25092:intron 40.0%
AAAGCTTACACCCTTCAACT+GGG + chr8.4:72307959-72307978 None:intergenic 40.0%
AACTGTGGATGTGTTGTGTT+GGG - chr8.4:72306419-72306438 MS.gene25092:intron 40.0%
ACTGTTTATGTGGGTAACCT+TGG - chr8.4:72309627-72309646 MS.gene25092:intron 40.0%
AGAGAGACAGAGAGATAAAG+GGG - chr8.4:72306880-72306899 MS.gene25092:CDS 40.0%
AGAGAGAGACAGAGAGATAA+AGG - chr8.4:72306878-72306897 MS.gene25092:CDS 40.0%
ATCGTCATTTCCATGCTCTT+GGG - chr8.4:72310038-72310057 MS.gene25092:intron 40.0%
ATGTGGTATTGTTTCCTTGG+AGG - chr8.4:72306479-72306498 MS.gene25092:intron 40.0%
ATTTCCCAACTAAACCTCCA+AGG + chr8.4:72306496-72306515 None:intergenic 40.0%
ATTTGCAGAAAGTAAGGGAC+TGG + chr8.4:72307157-72307176 None:intergenic 40.0%
CAAGTACTTGGATCAAAACC+AGG + chr8.4:72307523-72307542 None:intergenic 40.0%
CCAAAATATCTGTTGCGGAT+AGG + chr8.4:72310508-72310527 None:intergenic 40.0%
CGGACCCTAATATGACTTAA+TGG + chr8.4:72306572-72306591 None:intergenic 40.0%
CTGGCCATATTAACTCTCAA+TGG - chr8.4:72308140-72308159 MS.gene25092:intron 40.0%
CTGTTTATGTGGGTAACCTT+GGG - chr8.4:72309628-72309647 MS.gene25092:intron 40.0%
CTTTCCCAACTAAACCTCAA+AGG + chr8.4:72306290-72306309 None:intergenic 40.0%
GAAAGAGATTGTAGAGAGTC+GGG - chr8.4:72306768-72306787 MS.gene25092:intron 40.0%
GAGAGAGACAGAGAGATAAA+GGG - chr8.4:72306879-72306898 MS.gene25092:CDS 40.0%
GAGATATAGTACTCATGCTG+AGG - chr8.4:72310114-72310133 MS.gene25092:intron 40.0%
GCAAAAACTTCTTGCAGAAG+TGG + chr8.4:72307927-72307946 None:intergenic 40.0%
GCTACATAGTACAAAACCCT+AGG + chr8.4:72305652-72305671 None:intergenic 40.0%
GGCAACCTATCAAAGTTAAC+TGG - chr8.4:72308249-72308268 MS.gene25092:CDS 40.0%
GTCGTGTATATTTCACAGCA+CGG + chr8.4:72310333-72310352 None:intergenic 40.0%
GTGAGAAAATGCAGGTATGT+GGG - chr8.4:72307876-72307895 MS.gene25092:CDS 40.0%
GTGTATTGAGGATTGTTCTC+AGG + chr8.4:72309606-72309625 None:intergenic 40.0%
GTTCAAAGGAGTTGCACATT+AGG - chr8.4:72308988-72309007 MS.gene25092:intron 40.0%
GTTTCCTTGGAGGTTTAGTT+GGG - chr8.4:72306489-72306508 MS.gene25092:intron 40.0%
TAGACAAAACTCACACACTG+CGG + chr8.4:72307546-72307565 None:intergenic 40.0%
TAGACAAATACGCTGCAACT+GGG - chr8.4:72309210-72309229 MS.gene25092:intron 40.0%
TCATGTCCTTCGCTAAACTA+CGG + chr8.4:72307044-72307063 None:intergenic 40.0%
TCCAGCGTGATAAAGGATTT+GGG - chr8.4:72310086-72310105 MS.gene25092:intron 40.0%
TCGTGTATATTTCACAGCAC+GGG + chr8.4:72310332-72310351 None:intergenic 40.0%
TCTGCAAATCAAACACCCAT+AGG - chr8.4:72307168-72307187 MS.gene25092:intron 40.0%
TGAATATTGTGTGAGGAGTG+TGG - chr8.4:72310271-72310290 MS.gene25092:intron 40.0%
TGTGAGAAAATGCAGGTATG+TGG - chr8.4:72307875-72307894 MS.gene25092:CDS 40.0%
TGTTTCCTTGGAGGTTTAGT+TGG - chr8.4:72306488-72306507 MS.gene25092:intron 40.0%
TTATGTGGGATCAGAAGACT+GGG - chr8.4:72308693-72308712 MS.gene25092:intron 40.0%
TTCATGGGACAGGACAAAAT+GGG + chr8.4:72307095-72307114 None:intergenic 40.0%
TTGTCCATCAAACATCGAAC+AGG + chr8.4:72306678-72306697 None:intergenic 40.0%
TTGTCCTGTTCGATGTTTGA+TGG - chr8.4:72306671-72306690 MS.gene25092:intron 40.0%
TTTGCCACAGAGATAAGACT+GGG + chr8.4:72310167-72310186 None:intergenic 40.0%
! AAAAATAGACCTGCTGGCTA+CGG + chr8.4:72308748-72308767 None:intergenic 40.0%
! AGTGTGGTGGAACTAACAAA+TGG - chr8.4:72309283-72309302 MS.gene25092:intron 40.0%
! CCTATCCGCAACAGATATTT+TGG - chr8.4:72310505-72310524 MS.gene25092:intron 40.0%
! CTTCTGCAAGAAGTTTTTGC+GGG - chr8.4:72307927-72307946 MS.gene25092:intron 40.0%
! GTTCGATGTTTGATGGACAA+TGG - chr8.4:72306678-72306697 MS.gene25092:intron 40.0%
! TTTTCACCTTTTGATGTCGC+TGG - chr8.4:72310202-72310221 MS.gene25092:intron 40.0%
! TTTTGCCACAGAGATAAGAC+TGG + chr8.4:72310168-72310187 None:intergenic 40.0%
!! AGGGAGAGAATGTTTTTGAG+TGG - chr8.4:72306961-72306980 MS.gene25092:CDS 40.0%
!! CTTTGAGGTTTAGTTGGGAA+AGG - chr8.4:72306288-72306307 MS.gene25092:intron 40.0%
!! GGTCCGTTTGATTTGCAAAA+GGG - chr8.4:72306586-72306605 MS.gene25092:intron 40.0%
!! TTTCCTTTTTGTGCTGGCAT+TGG - chr8.4:72306230-72306249 MS.gene25092:intron 40.0%
!!! AGTGGGTATTTGGCTTTTGA+TGG - chr8.4:72305854-72305873 MS.gene25092:intron 40.0%
!!! CAGATATTTTGGCATACGAG+CGG - chr8.4:72310516-72310535 MS.gene25092:intron 40.0%
AACTTCTTGCAGAAGTGGCT+CGG + chr8.4:72307922-72307941 None:intergenic 45.0%
ACACCAATGCCAGCACAAAA+AGG + chr8.4:72306236-72306255 None:intergenic 45.0%
ACCCAAATCCTTTATCACGC+TGG + chr8.4:72310090-72310109 None:intergenic 45.0%
AGGGATTGCACTAAACACCT+AGG - chr8.4:72305632-72305651 MS.gene25092:CDS 45.0%
ATAAAGGGGAGAGAGATAGG+AGG - chr8.4:72306894-72306913 MS.gene25092:CDS 45.0%
ATCTCTTTACCGTCCTCTGT+AGG + chr8.4:72309567-72309586 None:intergenic 45.0%
CAACAATCTCTCTATCACCC+TGG - chr8.4:72305505-72305524 MS.gene25092:CDS 45.0%
CAGATTGAACCAATCCCAAG+TGG - chr8.4:72307487-72307506 MS.gene25092:intron 45.0%
CAGCTAGCAATGAGCAAGAT+GGG - chr8.4:72310539-72310558 MS.gene25092:intron 45.0%
CAGGAGGCAAATTTCCACTT+GGG + chr8.4:72307504-72307523 None:intergenic 45.0%
CATCGTCATTTCCATGCTCT+TGG - chr8.4:72310037-72310056 MS.gene25092:intron 45.0%
CATGTCCTTCGCTAAACTAC+GGG + chr8.4:72307043-72307062 None:intergenic 45.0%
CCTCTTAAGCAAGCTGCAAT+TGG - chr8.4:72310602-72310621 MS.gene25092:intron 45.0%
CTGGGGGCTTACTAAAACTT+TGG - chr8.4:72309409-72309428 MS.gene25092:intron 45.0%
GAGATAAAGGGGAGAGAGAT+AGG - chr8.4:72306891-72306910 MS.gene25092:CDS 45.0%
GGCAAATTTCCACTTGGGAT+TGG + chr8.4:72307499-72307518 None:intergenic 45.0%
GGGATTGCACTAAACACCTA+GGG - chr8.4:72305633-72305652 MS.gene25092:CDS 45.0%
GTACTTGGATCAAAACCAGG+AGG + chr8.4:72307520-72307539 None:intergenic 45.0%
GTAGACAAATACGCTGCAAC+TGG - chr8.4:72309209-72309228 MS.gene25092:intron 45.0%
GTCCAGCGTGATAAAGGATT+TGG - chr8.4:72310085-72310104 MS.gene25092:intron 45.0%
GTTATGTGGGATCAGAAGAC+TGG - chr8.4:72308692-72308711 MS.gene25092:intron 45.0%
GTTCATGGGACAGGACAAAA+TGG + chr8.4:72307096-72307115 None:intergenic 45.0%
GTTGCCTGTAGAATCACCAA+AGG + chr8.4:72310004-72310023 None:intergenic 45.0%
TAAAGGGGAGAGAGATAGGA+GGG - chr8.4:72306895-72306914 MS.gene25092:CDS 45.0%
TCATGGGACAGGACAAAATG+GGG + chr8.4:72307094-72307113 None:intergenic 45.0%
TCGTCATTTCCATGCTCTTG+GGG - chr8.4:72310039-72310058 MS.gene25092:intron 45.0%
TTAAGAGGATGCTGTGCTTG+AGG + chr8.4:72310590-72310609 None:intergenic 45.0%
TTATGTGGGTAACCTTGGGT+CGG - chr8.4:72309632-72309651 MS.gene25092:intron 45.0%
TTCCAAGCCACTTACCTGAA+AGG + chr8.4:72309189-72309208 None:intergenic 45.0%
! AATGCCCAGTCTTATCTCTG+TGG - chr8.4:72310160-72310179 MS.gene25092:intron 45.0%
! ACGACCTTTGGTGATTCTAC+AGG - chr8.4:72309997-72310016 MS.gene25092:intron 45.0%
! AGAGGATTTGAAGCAGTTCC+AGG + chr8.4:72310455-72310474 None:intergenic 45.0%
! CAAGAAGTTTTTGCGGGTAC+TGG - chr8.4:72307933-72307952 MS.gene25092:intron 45.0%
! CAAGAGCATGGAAATGACGA+TGG + chr8.4:72310039-72310058 None:intergenic 45.0%
! CCAATTGCAGCTTGCTTAAG+AGG + chr8.4:72310605-72310624 None:intergenic 45.0%
! GCATGCGAAAAGTGTAGCAT+CGG + chr8.4:72308440-72308459 None:intergenic 45.0%
!! ACTTTGTTGGTGACTTGGCA+TGG - chr8.4:72308628-72308647 MS.gene25092:CDS 45.0%
!! AGGGAAAGTACCGGACAAAA+CGG - chr8.4:72306605-72306624 MS.gene25092:intron 45.0%
!! GGGTCCGTTTGATTTGCAAA+AGG - chr8.4:72306585-72306604 MS.gene25092:CDS 45.0%
!! TGGCTCTGAAATTGCGTTTG+AGG - chr8.4:72306064-72306083 MS.gene25092:CDS 45.0%
!!! AAAAATTTAATTTTTTTTAG+TGG - chr8.4:72305836-72305855 MS.gene25092:intron 5.0%
!!! AAAATTTAATTTTTTTTAGT+GGG - chr8.4:72305837-72305856 MS.gene25092:intron 5.0%
ACAGGACAAAATGGGGAGCA+AGG + chr8.4:72307087-72307106 None:intergenic 50.0%
AGTGAGCCAGCGACATCAAA+AGG + chr8.4:72310211-72310230 None:intergenic 50.0%
AGTTTCTTACCTCCGACCCA+AGG + chr8.4:72309647-72309666 None:intergenic 50.0%
ATATCTGTTGCGGATAGGCC+TGG + chr8.4:72310503-72310522 None:intergenic 50.0%
ATATGCCAGTGGTCAGAGAG+AGG - chr8.4:72308274-72308293 MS.gene25092:intron 50.0%
ATCAGAAGACTGGGCGATCA+AGG - chr8.4:72308702-72308721 MS.gene25092:intron 50.0%
ATGTCCTGTCTGTGCCTTTC+AGG - chr8.4:72309172-72309191 MS.gene25092:intron 50.0%
CAGGACAAAATGGGGAGCAA+GGG + chr8.4:72307086-72307105 None:intergenic 50.0%
CCAAGTGGAAATTTGCCTCC+TGG - chr8.4:72307502-72307521 MS.gene25092:intron 50.0%
CCAGGAGGCAAATTTCCACT+TGG + chr8.4:72307505-72307524 None:intergenic 50.0%
CTAGCAATGAGCAAGATGGG+TGG - chr8.4:72310542-72310561 MS.gene25092:intron 50.0%
GAACTGTGGATGGGTGTGTT+GGG - chr8.4:72307230-72307249 MS.gene25092:intron 50.0%
GAGAACGAGAGACGTGAGAT+AGG - chr8.4:72306817-72306836 MS.gene25092:intron 50.0%
GATGAATAGGGACCAACCTG+AGG + chr8.4:72305544-72305563 None:intergenic 50.0%
GCAGCTAGCAATGAGCAAGA+TGG - chr8.4:72310538-72310557 MS.gene25092:intron 50.0%
GGAGAGAGAGAGAGAGATAG+AGG - chr8.4:72306789-72306808 MS.gene25092:intron 50.0%
GGTCAGAGAGAGGATACATC+AGG - chr8.4:72308284-72308303 MS.gene25092:intron 50.0%
GTTAACTGGGCATATGCCAG+TGG - chr8.4:72308263-72308282 MS.gene25092:CDS 50.0%
GTTCGTGTCCAGCGTGATAA+AGG - chr8.4:72310079-72310098 MS.gene25092:intron 50.0%
GTTGTCCCGTAGTTTAGCGA+AGG - chr8.4:72307035-72307054 MS.gene25092:intron 50.0%
TCAGAAGACTGGGCGATCAA+GGG - chr8.4:72308703-72308722 MS.gene25092:intron 50.0%
TGTATCCTCTCTCTGACCAC+TGG + chr8.4:72308282-72308301 None:intergenic 50.0%
TGTTTCATTCCGTAGCCAGC+AGG - chr8.4:72308736-72308755 MS.gene25092:intron 50.0%
! AACTGGGCAACAAAAGGTGC+TGG - chr8.4:72309226-72309245 MS.gene25092:intron 50.0%
! CGGGACAACTTTTTGTCCCA+AGG + chr8.4:72307024-72307043 None:intergenic 50.0%
! CTCGGACAGTAAAAGTGTGG+TGG - chr8.4:72309270-72309289 MS.gene25092:intron 50.0%
! CTTACCTGAAAGGCACAGAC+AGG + chr8.4:72309179-72309198 None:intergenic 50.0%
! GCAGCTCTGGCAATTCAGAT+GGG - chr8.4:72310136-72310155 MS.gene25092:intron 50.0%
! GCTGTGCAGCAGCAACATTT+TGG + chr8.4:72310658-72310677 None:intergenic 50.0%
! GGATTTGAAGCAGTTCCAGG+TGG + chr8.4:72310452-72310471 None:intergenic 50.0%
! GTCTGTGCCTTTCAGGTAAG+TGG - chr8.4:72309179-72309198 MS.gene25092:intron 50.0%
! TGCCTTTCAGGTAAGTGGCT+TGG - chr8.4:72309184-72309203 MS.gene25092:intron 50.0%
!! AGTGTAGCATCGGTAACCTC+AGG + chr8.4:72308430-72308449 None:intergenic 50.0%
!! GTGGCTCGGTTACTTGTGTA+TGG + chr8.4:72307908-72307927 None:intergenic 50.0%
ACTGGGCGATCAAGGGGATT+TGG - chr8.4:72308710-72308729 MS.gene25092:intron 55.0%
AGCTGCAATTGGAGCTAGCC+AGG - chr8.4:72310613-72310632 MS.gene25092:intron 55.0%
CAAAATGGGGAGCAAGGGAC+CGG + chr8.4:72307081-72307100 None:intergenic 55.0%
CACACACTGCGGCAAGTACT+TGG + chr8.4:72307535-72307554 None:intergenic 55.0%
CAGAAGACTGGGCGATCAAG+GGG - chr8.4:72308704-72308723 MS.gene25092:intron 55.0%
CATCGGTAACCTCAGGACTG+AGG + chr8.4:72308423-72308442 None:intergenic 55.0%
CATTTCCATGCTCTTGGGGC+TGG - chr8.4:72310043-72310062 MS.gene25092:intron 55.0%
CGAACTGTGGATGGGTGTGT+TGG - chr8.4:72307229-72307248 MS.gene25092:intron 55.0%
CGCTGCAACTGGGCAACAAA+AGG - chr8.4:72309220-72309239 MS.gene25092:intron 55.0%
CTCTTAGCTCCACCTCAGGT+TGG - chr8.4:72305529-72305548 MS.gene25092:CDS 55.0%
GAAGCAGTTCCAGGTGGAGT+GGG + chr8.4:72310446-72310465 None:intergenic 55.0%
GAATAGGGACCAACCTGAGG+TGG + chr8.4:72305541-72305560 None:intergenic 55.0%
GAGAGATAGGAGGGAGAGAG+AGG - chr8.4:72306904-72306923 MS.gene25092:CDS 55.0%
GAGGTGGAGCTAAGAGACCA+GGG + chr8.4:72305525-72305544 None:intergenic 55.0%
GATAGGAGGGAGAGAGAGGA+AGG - chr8.4:72306908-72306927 MS.gene25092:CDS 55.0%
GCTAGCCAGGCGATATACGA+CGG - chr8.4:72310626-72310645 MS.gene25092:intron 55.0%
TACTCATGCTGAGGCAGCTC+TGG - chr8.4:72310123-72310142 MS.gene25092:intron 55.0%
TGAAGCAGTTCCAGGTGGAG+TGG + chr8.4:72310447-72310466 None:intergenic 55.0%
TGAGGTGGAGCTAAGAGACC+AGG + chr8.4:72305526-72305545 None:intergenic 55.0%
TGGTCTCTTAGCTCCACCTC+AGG - chr8.4:72305525-72305544 MS.gene25092:CDS 55.0%
! GGCAGCTCTGGCAATTCAGA+TGG - chr8.4:72310135-72310154 MS.gene25092:intron 55.0%
! TCTTGGGGCTGGTGTGATAG+AGG - chr8.4:72310054-72310073 MS.gene25092:intron 55.0%
!! TGGGCAACAAAAGGTGCTGG+CGG - chr8.4:72309229-72309248 MS.gene25092:intron 55.0%
!! TGTTGGTGACCTCAGTCCTG+AGG - chr8.4:72308411-72308430 MS.gene25092:intron 55.0%
ACCCACCGTCGTATATCGCC+TGG + chr8.4:72310634-72310653 None:intergenic 60.0%
AGCCAGGCGATATACGACGG+TGG - chr8.4:72310629-72310648 MS.gene25092:CDS 60.0%
CGATCGCAGATCTGCTGCTC+TGG - chr8.4:72308121-72308140 MS.gene25092:intron 60.0%
GCCAGGCGATATACGACGGT+GGG - chr8.4:72310630-72310649 MS.gene25092:CDS 60.0%
GTTGCGGATAGGCCTGGTAG+AGG + chr8.4:72310497-72310516 None:intergenic 60.0%
TCACACCAGCCCCAAGAGCA+TGG + chr8.4:72310051-72310070 None:intergenic 60.0%
TGTGGGTAACCTTGGGTCGG+AGG - chr8.4:72309635-72309654 MS.gene25092:intron 60.0%
!! CGGGTACTGGCCCAGTTGAA+GGG - chr8.4:72307946-72307965 MS.gene25092:intron 60.0%
GATGGGTGTGTTGGGTGCCC+TGG - chr8.4:72307238-72307257 MS.gene25092:intron 65.0%
! GTAGAGGCGCAGCAGCAGGT+GGG + chr8.4:72310481-72310500 None:intergenic 65.0%
! TAGAGGCGCAGCAGCAGGTG+GGG + chr8.4:72310480-72310499 None:intergenic 65.0%
!! GCGGGTACTGGCCCAGTTGA+AGG - chr8.4:72307945-72307964 MS.gene25092:intron 65.0%
CCTGCTGCTGCGCCTCTACC+AGG - chr8.4:72310482-72310501 MS.gene25092:intron 70.0%
GCAGCAGCAGGTGGGGGAAG+AGG + chr8.4:72310473-72310492 None:intergenic 70.0%
GGGAGCAAGCCCACTCCACC+TGG - chr8.4:72310434-72310453 MS.gene25092:intron 70.0%
! AGAGGCGCAGCAGCAGGTGG+GGG + chr8.4:72310479-72310498 None:intergenic 70.0%
! CCTGGTAGAGGCGCAGCAGC+AGG + chr8.4:72310485-72310504 None:intergenic 70.0%
! GGTAGAGGCGCAGCAGCAGG+TGG + chr8.4:72310482-72310501 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 72305478 72310697 72305478 ID=MS.gene25092
chr8.4 mRNA 72305478 72310697 72305478 ID=MS.gene25092.t1;Parent=MS.gene25092
chr8.4 exon 72310629 72310697 72310629 ID=MS.gene25092.t1.exon1;Parent=MS.gene25092.t1
chr8.4 CDS 72310629 72310697 72310629 ID=cds.MS.gene25092.t1;Parent=MS.gene25092.t1
chr8.4 exon 72308624 72308685 72308624 ID=MS.gene25092.t1.exon2;Parent=MS.gene25092.t1
chr8.4 CDS 72308624 72308685 72308624 ID=cds.MS.gene25092.t1;Parent=MS.gene25092.t1
chr8.4 exon 72308183 72308285 72308183 ID=MS.gene25092.t1.exon3;Parent=MS.gene25092.t1
chr8.4 CDS 72308183 72308285 72308183 ID=cds.MS.gene25092.t1;Parent=MS.gene25092.t1
chr8.4 exon 72308004 72308080 72308004 ID=MS.gene25092.t1.exon4;Parent=MS.gene25092.t1
chr8.4 CDS 72308004 72308080 72308004 ID=cds.MS.gene25092.t1;Parent=MS.gene25092.t1
chr8.4 exon 72307870 72307931 72307870 ID=MS.gene25092.t1.exon5;Parent=MS.gene25092.t1
chr8.4 CDS 72307870 72307931 72307870 ID=cds.MS.gene25092.t1;Parent=MS.gene25092.t1
chr8.4 exon 72307693 72307780 72307693 ID=MS.gene25092.t1.exon6;Parent=MS.gene25092.t1
chr8.4 CDS 72307693 72307780 72307693 ID=cds.MS.gene25092.t1;Parent=MS.gene25092.t1
chr8.4 exon 72307418 72307493 72307418 ID=MS.gene25092.t1.exon7;Parent=MS.gene25092.t1
chr8.4 CDS 72307418 72307493 72307418 ID=cds.MS.gene25092.t1;Parent=MS.gene25092.t1
chr8.4 exon 72307300 72307330 72307300 ID=MS.gene25092.t1.exon8;Parent=MS.gene25092.t1
chr8.4 CDS 72307300 72307330 72307300 ID=cds.MS.gene25092.t1;Parent=MS.gene25092.t1
chr8.4 exon 72306862 72306981 72306862 ID=MS.gene25092.t1.exon9;Parent=MS.gene25092.t1
chr8.4 CDS 72306862 72306981 72306862 ID=cds.MS.gene25092.t1;Parent=MS.gene25092.t1
chr8.4 exon 72306519 72306604 72306519 ID=MS.gene25092.t1.exon10;Parent=MS.gene25092.t1
chr8.4 CDS 72306519 72306604 72306519 ID=cds.MS.gene25092.t1;Parent=MS.gene25092.t1
chr8.4 exon 72305980 72306156 72305980 ID=MS.gene25092.t1.exon11;Parent=MS.gene25092.t1
chr8.4 CDS 72305980 72306156 72305980 ID=cds.MS.gene25092.t1;Parent=MS.gene25092.t1
chr8.4 exon 72305478 72305750 72305478 ID=MS.gene25092.t1.exon12;Parent=MS.gene25092.t1
chr8.4 CDS 72305478 72305750 72305478 ID=cds.MS.gene25092.t1;Parent=MS.gene25092.t1
Gene Sequence

>MS.gene25092

ATGATGCAACAAGCTGCTCTTCTTCAACAACAATCTCTCTATCACCCTGGTCTCTTAGCTCCACCTCAGGTTGGTCCCTATTCATCTCCATTTCTTCGATCATCTTCTCTTTTTTCACTGTGTTGATCTTATAGCTTTGCATTTTTTGTTTATTAGGGATTGCACTAAACACCTAGGGTTTTGTACTATGTAGCTAAATTTATTTTTTTTCTTCTTCAATTTAATAAGAAAATTGGGGTAATGGGTTTGATTTTTAGTGGGTGTTTGGTTTTGTTGAAAAAATTGAATTTTTTTAGTGGGTGTTTGATTTTGATGAAAAAAATTGATTTTTTATTTAGTGGGTGTTGGGATTTGATGAAAAAATTTAATTTTTTTTAGTGGGTATTTGGCTTTTGATGGAAAAAAATTGAATTTTATAGTGGGTAGTTGGTTTTGATGAAAAAAATTGAATTTTGGAAGTTGAATTGTACCATTCCATTATTTTTTGTATGAGTTAAGGTTGTTAATTTTTCTGGGTTTTCATCAATTGAGTAGGGGTAGCTGAAATATTAGAAAGTTGTCATTTTTGTGTGTTTGAAGTGTGAAATGGCTCTGAAATTGCGTTTGAGGTGTTTTATTTTATATATATGAAAGCTCACTTGGTAAAGAAGCATTTTTTGTAGGAGTAGTGAGTAATGAGTACCAGTCTATTTAGTAATATGATGTGGTTGGTGTTAATGTAACTATGGAAATTTATTAAGAATGTTAATTTTTTTCCTTTTTGTGCTGGCATTGGTGTATAAGCTTGCAATTGATATATGGTATTGTTTCCTTTGAGGTTTAGTTGGGAAAGGAATCCGCATGACTTAGAGTTAATGTCTGGTTTGTTTGATGCAGTATTGAATTTGACTTTGCCAGATAGGAGTTATGTTTTCTTACTGCTGTAGTTTAGTTTGTATTCAAACTGTGGATGTGTTGTGTTGGGTGCAATGAACTCAATTTTACTTTAGTTTGTGATCAATATGTGGTATTGTTTCCTTGGAGGTTTAGTTGGGAAATGAATCTACATGGTTTAGGACTTAGAAATTATTTGTTTGATGTCGCAATGAACCCCATTAAGTCATATTAGGGTCCGTTTGATTTGCAAAAGGGAAAGTACCGGACAAAACGGTACAAATAGTACAACACAAACCTTTAAAGTACTGAACTATTTTTTGTCCTGTTCGATGTTTGATGGACAATGGACAGCACAAATAAAATAAAGTGAAATTTACTACAACACCCTTTATGAATCTAAATGTTATTAGAGGAGAAAGAGATTGTAGAGAGTCGGGAGAGAGAGAGAGAGATAGAGGTGAGAGAGAACGAGAGACGTGAGATAGGAGAGTGTGCGCATGTGTGTGTGAGTGTGAGAGAGAGAGAGAGAGAGACAGAGAGATAAAGGGGAGAGAGATAGGAGGGAGAGAGAGGAAGGAGATATGAGATATGAGAGAGTGAAAATACAAGGGAGAGAATGTTTTTGAGTGGAAAGTAAAAGGGTATTTTGGTATTTTAGATAACTTGTCCTTGGGACAAAAAGTTGTCCCGTAGTTTAGCGAAGGACATGAATCTGAACTTTTGTCCGGTCCCTTGCTCCCCATTTTGTCCTGTCCCATGAACAATTTTATAATCAACCAGAACAACTGAAGTTTTGATGTCCAGTCCCTTACTTTCTGCAAATCAAACACCCATAGGATTTTTGTTTTTCCTACTGTTGTAGTTTAGTTTTTATTCGAACTGTGGATGGGTGTGTTGGGTGCCCTGGACTCATTTTCATTTTCTTCTATTAGGCTTAGCAATGAACTCTTTTATGCGTTTTTTTGTCTGTTATTGTTTTGGTTATGTGCTTTCTTTCTCCCCATTCACTCTAGTTAATGTTCCTCATGCTATACTGTATTGATAGATACAATACAAATATTCAATCTTGATTTGGCCCCTTTTTCTTTTCATCTTTTCTTTCCTTTTTTCTTCTTTTTTACCTTTTCGTTTTGCAGATTGAACCAATCCCAAGTGGAAATTTGCCTCCTGGTTTTGATCCAAGTACTTGCCGCAGTGTGTGAGTTTTGTCTAGACATTTTTCACCTTTTATTCAATCTTATTGATCACTTCCCTTTTCTTTTGTTTTATGATTGTGAGACAAGCTTAGGCATCGTTTACTTAATTTTATCTTTTATTTAGTTTTCAAAGTTAGAAGCATTTGAGTTTCTGATTTTTATATATGACCTAAGTTTATTATATCTTGCAACACGTAAAACCAGTTCTGTTGCATTAAACCATTACTGTATGTTACTTCTTGCTAATCTGACTTGAATTAATTGATTAATTGTAGCCTAATTGTTTGTTTCTTCTCTTCTTTTTTTAAATTGTAGCTTCTTTATCTGTGAGAAAATGCAGGTATGTGGGCAATGTCCATACACAAGTAACCGAGCCACTTCTGCAAGAAGTTTTTGCGGGTACTGGCCCAGTTGAAGGGTGTAAGCTTTTTAGGAAAGAGAAGGTATGTTTTTGTATATACATATGTCTTTGTCTAATATATTGATTTAAAGTACTAGATAAAACTGTAGCTTTGTATTTGACATCTTATGTCTCTCTTTTGCAGTCATCTTATGGATTCATTCATTACTTCGATCGCAGATCTGCTGCTCTGGCCATATTAACTCTCAATGGAAGGCATCTGTAAGTGCAGTTCTTCTATAATTGTGTTAGGTTAGTTTGGATTTACACTCAGTTCAATTCAATGGTTTGTAGATTCGGGCAACCTATCAAAGTTAACTGGGCATATGCCAGTGGTCAGAGAGAGGATACATCAGGTTAGTTCAGAGATGATTATAAGATACATATGTTTTGAACAAATCATTTTGGTGAATATATTACATAATATGTTTCTTTGAATTTTCAGGCCATTACAACATATTTGTTGGTGACCTCAGTCCTGAGGTTACCGATGCTACACTTTTCGCATGCTTTTCTGTCTACCAAAGTTGTTCGTAAGCTTCATTCTCCTATGATTTCTTAGTAAAAATAGCATCCATTTTATATATTTGGAATTGGAGCAATCTTCATTTATTCAAAATGGGAAAAAATGTGTTTGTTATTCCATATATGTGATAATGGTGCATTGCATACTAAACAACTTTGTTGGTGACTTGGCATGGCTCACTAACTTTATCTTTTTGATGGTTTTAGAGATGCAAGAGTTATGTGGGATCAGAAGACTGGGCGATCAAGGGGATTTGGATTTGTTTCATTCCGTAGCCAGCAGGTCTATTTTTGTCTTAAAATCTTAATTTGTGTTTTGGGGTAAGAAACTTTATGATGTTTTTGACTTATATTTTTTGTCATTTTGTAGGATGCTCAAAGTGCTATAAATGATTTGACCGGTAAGAAACTTGTCATTGACATAGCAACCTTATTTTATTTTAGCCAATTATAATTTGGAAAAGTCTCCATTGATTTTTCGTTAGTAAATGCCGAAACAAAACCATATTCTCAGTTCAAAGGAGTTGCACATTAGGTTTTTTTGTATGAATTGATTTTGACTTCCTATGTTTAATTATTTTAAAAGTTCATGATGATAAATGTCCTATATATTTTTTTTCAGCATATTGACTTCTGGTGATGCACTGTTTAATTGATTATAGTTCATATTATTTTCACTTATGATCGAGGAATAATGATGTCCTGTCTGTGCCTTTCAGGTAAGTGGCTTGGAAGTAGACAAATACGCTGCAACTGGGCAACAAAAGGTGCTGGCGGTATTGAAGAGAAGCAAAACTCGGACAGTAAAAGTGTGGTGGAACTAACAAATGGTTCATCTGGTGAGTAACTTATGCCGTAGTTCCTGAAACAATAATAGAATGGTTGAATCAAGTACTTTCACATTTAACTTCTATATTTCGATTTAAAAATAGATCTGGGGGCTTACTAAAACTTTGGTGTCCTCTTTTTACCCTTGACCTAATGATTTTTAGGTGATTAAACTTTTAAAAAGTATTGTCTTCATAAATACATCTGTTGTCTTAGTTAACAGATGGAATACTAGATATTCAATTAACAAACACTTTTTATCCTACAGAGGACGGTAAAGAGATATCTAGCAATGATGTTCCTGAGAACAATCCTCAATACACAACTGTTTATGTGGGTAACCTTGGGTCGGAGGTAAGAAACTTTGTTTATATCTATTTTTCAATCTATGGTTTGAACAAAACAGTTCATCTGGCAATAGTCCATTGATGATTTTCCAAGCTTATTATTCTATGATGCAACAAAAATAATGTTTTGAAACCCATTGGTCCATAACCAATATTTGTATTCCTTCACCTATTTTAGCTTTTTGTTTTATTCTCCATTTCTACTTTGGCCATTATGTTAGAGATGTATTAAGACTTTAGCTTTTAAATTTTAACCTTTTGATTTTACAATATATGTGATGTGATGTTTACTTGTGAGCTGTATCTTTGAAATCTGTGCGGAAATTGCTGTTTCCATTTTAATCATTACGACCTTTGGTGATTCTACAGGCAACACAGCTTGATCTCCATCGTCATTTCCATGCTCTTGGGGCTGGTGTGATAGAGGAAGTTCGTGTCCAGCGTGATAAAGGATTTGGGTTTGTGAGATATAGTACTCATGCTGAGGCAGCTCTGGCAATTCAGATGGGAAATGCCCAGTCTTATCTCTGTGGCAAAATAATTAAGGTGTGTTTTTCACCTTTTGATGTCGCTGGCTCACTGCTAATTGCTATGTAGTTTTTTCTTCGTTTTGTTTTATGCTGAATATTGTGTGAGGAGTGTGGATATTTCCACATTGACAATTGACATGCTTTCATCACCCGTGCTGTGAAATATACACGACTTATTATCTTTATTCATGAATTTGATTTGGACCGATCTTATTGCCTCTGACTATTATTGTGTTCAAATATAGTGCTCTTGGGGGAGCAAGCCCACTCCACCTGGAACTGCTTCAAATCCTCTTCCCCCACCTGCTGCTGCGCCTCTACCAGGCCTATCCGCAACAGATATTTTGGCATACGAGCGGCAGCTAGCAATGAGCAAGATGGGTGGAGTTCATGCTGCGTTGATGCATCCTCAAGCACAGCATCCTCTTAAGCAAGCTGCAATTGGAGCTAGCCAGGCGATATACGACGGTGGGTTCCAAAATGTTGCTGCTGCACAGCAAATGATGTATTATCAGTAA
Protein sequence

>MS.gene25092.t1

MMQQAALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNVHTQVTEPLLQEVFAGTGPVEGCKLFRKEKSSYGFIHYFDRRSAALAILTLNGRHLFGQPIKVNWAYASGQREDTSGHYNIFVGDLSPEVTDATLFACFSVYQSCSDARVMWDQKTGRSRGFGFVSFRSQQDAQSAINDLTGKWLGSRQIRCNWATKGAGGIEEKQNSDSKSVVELTNGSSEDGKEISSNDVPENNPQYTTVYVGNLGSEATQLDLHRHFHALGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNAQSYLCGKIIKCSWGSKPTPPGTASNPLPPPAAAPLPGLSATDILAYERQLAMSKMGGVHAALMHPQAQHPLKQAAIGASQAIYDGGFQNVAAAQQMMYYQ